Class SAMReadGroupRecord

    • Constructor Detail

      • SAMReadGroupRecord

        public SAMReadGroupRecord​(String id)
    • Method Detail

      • getReadGroupId

        public String getReadGroupId()
      • getSample

        public String getSample()
      • setSample

        public void setSample​(String value)
      • getLibrary

        public String getLibrary()
      • setLibrary

        public void setLibrary​(String value)
      • getPlatformUnit

        public String getPlatformUnit()
      • setPlatformUnit

        public void setPlatformUnit​(String pu)
      • getPlatform

        public String getPlatform()
      • setPlatform

        public void setPlatform​(String platform)
      • getRunDate

        public Date getRunDate()
      • getFlowOrder

        public String getFlowOrder()
      • setFlowOrder

        public void setFlowOrder​(String flowOrder)
      • getKeySequence

        public String getKeySequence()
      • setKeySequence

        public void setKeySequence​(String keySequence)
      • setRunDate

        public void setRunDate​(Date runDate)
        Converts to Iso8601Date if not already in that form.
      • getSequencingCenter

        public String getSequencingCenter()
      • setSequencingCenter

        public void setSequencingCenter​(String center)
      • getDescription

        public String getDescription()
      • setDescription

        public void setDescription​(String description)
      • getPredictedMedianInsertSize

        public Integer getPredictedMedianInsertSize()
      • setPredictedMedianInsertSize

        public void setPredictedMedianInsertSize​(Integer predictedMedianInsertSize)
      • getProgramGroup

        public String getProgramGroup()
      • setProgramGroup

        public void setProgramGroup​(String programGroup)
      • getPlatformModel

        public String getPlatformModel()
      • setPlatformModel

        public void setPlatformModel​(String platformModel)
      • equivalent

        public boolean equivalent​(SAMReadGroupRecord that)
        Returns:
        true if this == that except for the read group ID, which is arbitrary
      • hashCode

        public int hashCode()
        Overrides:
        hashCode in class Object