Package picard.illumina.parser.readers
Class BclIndexReader
- java.lang.Object
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- picard.illumina.parser.readers.BclIndexReader
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public class BclIndexReader extends Object
Annoyingly, there are two different files with extension .bci in NextSeq output. This reader handles the file that contains virtual file pointers into a .bcl.bgzf file. After the header, there is a 64-bit record per tile.
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Constructor Summary
Constructors Constructor Description BclIndexReader(File bclFile)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description long
get(int recordNumber)
File
getBciFile()
int
getNumTiles()
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