libpappsomspp
Library for mass spectrometry
xicpeptideinterface.cpp
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/*******************************************************************************
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* Copyright (c) 2015 Olivier Langella <Olivier.Langella@moulon.inra.fr>.
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*
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* This file is part of the PAPPSOms++ library.
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*
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* PAPPSOms++ is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation, either version 3 of the License, or
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* (at your option) any later version.
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*
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* PAPPSOms++ is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
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*
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* Contributors:
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* Olivier Langella <Olivier.Langella@moulon.inra.fr> - initial API and
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*implementation
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******************************************************************************/
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#include "
xicpeptideinterface.h
"
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namespace
pappso
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{
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XicPeptideInterface::XicPeptideInterface
(
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const
MsRunId
&msrun_id,
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const
PeptideInterfaceSp
&peptideInterfaceSp,
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PrecisionPtr
precision,
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unsigned
int
charge)
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:
QualifiedXic
(msrun_id, peptideInterfaceSp.get()->getMz(charge), precision),
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m_z(charge),
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msp_peptideInterface(peptideInterfaceSp)
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{
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}
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XicPeptideInterface::~XicPeptideInterface
()
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{
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}
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}
// namespace pappso
xicpeptideinterface.h
pappso
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition:
aa.cpp:39
pappso::PeptideInterfaceSp
std::shared_ptr< const PeptideInterface > PeptideInterfaceSp
Definition:
peptideinterface.h:38
pappso::MsRunId
MS run identity MsRunId identifies an MS run with a unique ID (XmlId) and contains eventually informa...
Definition:
msrunid.h:53
pappso::XicPeptideInterface::XicPeptideInterface
XicPeptideInterface(const MsRunId &msrun_id, const PeptideInterfaceSp &peptideInterfaceSp, PrecisionPtr precision, unsigned int charge)
Definition:
xicpeptideinterface.cpp:29
pappso::PrecisionBase
Definition:
precision.h:44
pappso::QualifiedXic
Definition:
qualifiedxic.h:45
pappso::XicPeptideInterface::~XicPeptideInterface
~XicPeptideInterface()
Definition:
xicpeptideinterface.cpp:41
pappsomspp
xic
xicpeptideinterface.cpp
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