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Packages that use SingleSplitDistribution | |
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pal.eval | Classes for evaluating evolutionary hypothesis (chi-square and likelihood criteria) and estimating model parameters. |
pal.substmodel | Classes describing substitution models, i.e. |
Uses of SingleSplitDistribution in pal.eval |
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Methods in pal.eval with parameters of type SingleSplitDistribution | |
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static MolecularClockLikelihoodModel.Instance |
SingleSplitMolecularClockLikelihoodModel.createInstance(RateMatrixGroup beforeSplitMatrices,
RateMatrixGroup afterSplitMatrics,
NeoParameterized acrossSplitParameters,
SingleSplitDistribution probabilityModel,
double splitTime)
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static MolecularClockLikelihoodModel.Instance |
SingleSplitMolecularClockLikelihoodModel.createInstance(RateMatrixGroup beforeSplitMatrices,
RateMatrixGroup afterSplitMatrics,
NeoParameterized acrossSplitParameters,
SingleSplitDistribution probabilityModel,
LHCalculator.Factory baseFactory,
double splitTime)
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Uses of SingleSplitDistribution in pal.substmodel |
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Classes in pal.substmodel that implement SingleSplitDistribution | |
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class |
ConstantIndependentSingleSplitDistribution
Title: ConstantIndependentSingleSplitDistribution |
class |
SaturatedSingleSplitDistribution
Title: SaturatedSingleSplitDistribution |
class |
VariableIndependentSingleSplitDistribution
Title: VariableIndependentSingleSplitDistribution |
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