Uses of Interface
pal.treesearch.ConstraintModel.GroupManager

Packages that use ConstraintModel.GroupManager
pal.treesearch   
 

Uses of ConstraintModel.GroupManager in pal.treesearch
 

Classes in pal.treesearch that implement ConstraintModel.GroupManager
 class FixedBSRDTGlobalClockModel
           
 class FixedSRDTGlobalClockModel
           
 class GlobalClockModel
           
 class MRDTGlobalClockModel
           
 class SRDTGlobalClockModel
           
 

Methods in pal.treesearch that return ConstraintModel.GroupManager
 ConstraintModel.GroupManager MRDTGlobalClockModel.getGlobalClockConstraintGrouping(java.lang.String[] leafLabelSet)
           
 ConstraintModel.GroupManager ConstraintModel.getGlobalClockConstraintGrouping(java.lang.String[] leafLabelSet)
          Enquire about the clock constraint grouping of the leaf
 ConstraintModel.GroupManager SRDTGlobalClockModel.getGlobalClockConstraintGrouping(java.lang.String[] leafLabelSet)
           
 ConstraintModel.GroupManager FixedBSRDTGlobalClockModel.getGlobalClockConstraintGrouping(java.lang.String[] leafLabelSet)
           
 ConstraintModel.GroupManager FixedSRDTGlobalClockModel.getGlobalClockConstraintGrouping(java.lang.String[] leafLabelSet)
           
 ConstraintModel.GroupManager GlobalClockModel.getGlobalClockConstraintGrouping(java.lang.String[] leafLabelSet)
           
 ConstraintModel.GroupManager UnconstrainedModel.getGlobalClockConstraintGrouping(java.lang.String[] leafLabelSet)
           
 ConstraintModel.GroupManager GeneralConstraintGroupManager.getRelatedGroup()
           
 

Methods in pal.treesearch with parameters of type ConstraintModel.GroupManager
 Node ConstrainedLeafNode.buildDescendentPALNodeES(ConstraintModel.GroupManager groupManager)
           
 Node ConstrainedNode.buildDescendentPALNodeES(ConstraintModel.GroupManager groupConstraints)
          Build node with Expected Substitution Units
 Node AbstractParentableConstrainedNode.buildDescendentPALNodeES(ConstraintModel.GroupManager groupManager)
           
protected  MolecularClockLikelihoodModel.Leaf AbstractLeafNode.createNewConstrainedLeafCalculator(ConstraintModel.GroupManager parentGroup)
           
 GeneralConstraintGroupManager GeneralConstraintGroupManager.Store.getConstraintGroupManager(ConstraintModel.GroupManager grouping)
           
 boolean GeneralConstraintGroupManager.isSameGroup(ConstraintModel.GroupManager queryGroup)
           
 void PivotNode.postSetupNotify(ConstraintModel.GroupManager groupConstraints)
           
 void GroupLeader.postSetupNotify(ConstraintModel.GroupManager groupConstraints)
          Tell the group leader that the groupConstraints have been set up (parameter wise), and that internal node heights for example may be calculated
 void ConstrainedLeafNode.setupInternalNodeHeights(ConstraintModel.GroupManager groupConstraints)
           
 void ConstrainedNode.setupInternalNodeHeights(ConstraintModel.GroupManager groupConstraints)
           
 void AbstractParentableConstrainedNode.setupInternalNodeHeights(ConstraintModel.GroupManager groupConstraints)
           
 

Constructors in pal.treesearch with parameters of type ConstraintModel.GroupManager
ConstrainedLeafNode(ParentableConstrainedNode parentNode, Node peer, double height, GeneralConstructionTool tool, ConstraintModel.GroupManager parentGroup)
           
GeneralConstraintGroupManager(ConstraintModel.GroupManager relatedGroup)