Uses of Interface
pal.substmodel.SingleSplitDistribution

Packages that use SingleSplitDistribution
pal.eval Classes for evaluating evolutionary hypothesis (chi-square and likelihood criteria) and estimating model parameters. 
pal.substmodel Classes describing substitution models, i.e. 
 

Uses of SingleSplitDistribution in pal.eval
 

Methods in pal.eval with parameters of type SingleSplitDistribution
static MolecularClockLikelihoodModel.Instance SingleSplitMolecularClockLikelihoodModel.createInstance(RateMatrixGroup beforeSplitMatrices, RateMatrixGroup afterSplitMatrics, NeoParameterized acrossSplitParameters, SingleSplitDistribution probabilityModel, double splitTime)
           
static MolecularClockLikelihoodModel.Instance SingleSplitMolecularClockLikelihoodModel.createInstance(RateMatrixGroup beforeSplitMatrices, RateMatrixGroup afterSplitMatrics, NeoParameterized acrossSplitParameters, SingleSplitDistribution probabilityModel, LHCalculator.Factory baseFactory, double splitTime)
           
 

Uses of SingleSplitDistribution in pal.substmodel
 

Classes in pal.substmodel that implement SingleSplitDistribution
 class ConstantIndependentSingleSplitDistribution
          Title: ConstantIndependentSingleSplitDistribution
 class SaturatedSingleSplitDistribution
          Title: SaturatedSingleSplitDistribution
 class VariableIndependentSingleSplitDistribution
          Title: VariableIndependentSingleSplitDistribution