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Packages that use XmlParseException | |
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pal.xml | Utility classes for converting PAL objects to and from XML documents. |
Uses of XmlParseException in pal.xml |
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Methods in pal.xml that throw XmlParseException | |
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static Alignment |
ElementParser.parseAlignmentElement(org.w3c.dom.Element e)
Parses an alignment element and returns an alignment object. |
static Attribute |
ElementParser.parseAttributeElement(org.w3c.dom.Element e)
parses an attribute element. |
static DemographicModel |
ElementParser.parseDemographicModel(org.w3c.dom.Element e)
Parses an element from an DOM document into a DemographicModel. |
static Node |
ElementParser.parseEdgeNodeElement(org.w3c.dom.Element e)
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static double[] |
ElementParser.parseFrequencies(org.w3c.dom.Element element)
reads XML format of frequencies. |
static MutationRateModel |
ElementParser.parseMutationRateModel(org.w3c.dom.Element e)
Reads a mutation rate model from a DOM Document element. |
static Node |
ElementParser.parseNodeElement(org.w3c.dom.Element e)
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static RateDistribution |
ElementParser.parseRateDistribution(org.w3c.dom.Element e)
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static RateMatrix |
ElementParser.parseRateMatrix(org.w3c.dom.Element e)
Reads a rate matrix from a DOM Document element. |
protected static RateMatrix |
ElementParser.parseRateMatrix(org.w3c.dom.Element e,
Alignment a)
Reads a rate matrix from a DOM Document element. |
static TimeOrderCharacterData |
ElementParser.parseTimeDataElement(org.w3c.dom.Element e)
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static Tree |
ElementParser.parseTreeElement(org.w3c.dom.Element e)
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static void |
ElementParser.validateTagName(org.w3c.dom.Element e,
java.lang.String name)
Throws a runtime exception if the element does not have the given name. |
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