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Packages that use LikelihoodCalculator | |
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pal.eval | Classes for evaluating evolutionary hypothesis (chi-square and likelihood criteria) and estimating model parameters. |
Uses of LikelihoodCalculator in pal.eval |
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Classes in pal.eval that implement LikelihoodCalculator | |
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FastLikelihoodCalculator
Title: Fast Likelihood Calculator Description: A fast likelihood calculator Original code by Matthew Goode. |
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GeneralLikelihoodCalculator
Title: General Likelihood Calculator Description: A General likelihood calculator This calculates the likelihood of an topologically invariant tree (on an unchanging alignment) quickly by remembering partial likelihoods of invariant subtrees, and by essentially generating site patterns for each sub tree. |
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SimpleLikelihoodCalculator
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