Uses of Class
pal.math.MersenneTwisterFast

Packages that use MersenneTwisterFast
pal.math Classes for math stuff such as optimisation, numerical derivatives, matrix exponentials, random numbers, special function etc. 
pal.substmodel Classes describing substitution models, i.e. 
pal.treesearch   
 

Uses of MersenneTwisterFast in pal.math
 

Fields in pal.math declared as MersenneTwisterFast
static MersenneTwisterFast MathUtils.random
          A random number generator that is initialized with the clock when this class is loaded into the JVM.
 

Uses of MersenneTwisterFast in pal.substmodel
 

Constructors in pal.substmodel with parameters of type MersenneTwisterFast
SequenceSimulator(SubstitutionModel model, int sequenceLength, MersenneTwisterFast random, boolean stochasticDistribution)
          A constructor (with no provided random number generator - a fresh one is created)
 

Uses of MersenneTwisterFast in pal.treesearch
 

Methods in pal.treesearch with parameters of type MersenneTwisterFast
 void FreeBranch.doNNI(MersenneTwisterFast r)
           
static java.lang.String[][] SearcherUtils.split(java.lang.String[] leafNames, MersenneTwisterFast r)