pal.statistics
Interface TopologyTestEngine.StatisticsHandler
- All Known Implementing Classes:
- ShimodairaHasegawaStatistics
- Enclosing class:
- TopologyTestEngine
public static interface TopologyTestEngine.StatisticsHandler
Method Summary |
double[] |
getOriginalTestStatistics(double[] originalOptimisedLogLikelihoods,
int numberOfTopologies)
|
double[] |
getPValues(double[] originalOptimisedLogLikelihoods,
double[][] replicateLogLikelihoods,
int numberOfReplicates,
int numberOfTopologies)
|
getOriginalTestStatistics
double[] getOriginalTestStatistics(double[] originalOptimisedLogLikelihoods,
int numberOfTopologies)
getPValues
double[] getPValues(double[] originalOptimisedLogLikelihoods,
double[][] replicateLogLikelihoods,
int numberOfReplicates,
int numberOfTopologies)
- Parameters:
originalOptimisedLogLikelihoods
- stored as [topology]replicateLogLikelihoods
- store as [replicate][topology]numberOfTopologies
- the number of topologiesnumberOfTopologies
- the number of replicates
- Returns: