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std::vector< std::string > | vg::parseGenotypes (const std::string &vcf_line, size_t num_samples) |
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std::string | vg::insert_gbwt_path (MutablePathHandleGraph &graph, const gbwt::GBWT &gbwt_index, gbwt::size_type id) |
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Path | vg::extract_gbwt_path (const HandleGraph &graph, const gbwt::GBWT &gbwt_index, gbwt::size_type id) |
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std::string | vg::thread_name (const gbwt::GBWT &gbwt_index, gbwt::size_type id) |
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gbwt::GBWT | vg::get_gbwt (const std::vector< gbwt::vector_type > &paths) |
| Transform the paths into a GBWT index. Primarily for testing. More...
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