Package jebl.evolution.align.scores
Class AminoAcidScores
- java.lang.Object
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- jebl.evolution.align.scores.Scores
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- jebl.evolution.align.scores.AminoAcidScores
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- All Implemented Interfaces:
ScoreMatrix
- Direct Known Subclasses:
Blosum45
,Blosum50
,Blosum55
,Blosum60
,Blosum62
,Blosum65
,Blosum70
,Blosum75
,Blosum80
,Blosum85
,Blosum90
,Pam100
,Pam110
,Pam120
,Pam130
,Pam140
,Pam150
,Pam160
,Pam170
,Pam180
,Pam190
,Pam200
,Pam210
,Pam220
,Pam230
,Pam240
,Pam250
public class AminoAcidScores extends Scores
- Version:
- $Id: AminoAcidScores.java 360 2006-06-22 07:42:48Z pepster $
- Author:
- Alexei Drummond
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Constructor Summary
Constructors Constructor Description AminoAcidScores()
AminoAcidScores(float m, float n)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description java.lang.String
getAlphabet()
java.lang.String
getName()
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Methods inherited from class jebl.evolution.align.scores.Scores
duplicate, forMatrix, getMatrixString, getScore, includeAdditionalCharacters, includeGaps, toString
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