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FeatureFindingMetabo Member List

This is the complete list of members for FeatureFindingMetabo, including all inherited members.

charge_lower_bound_FeatureFindingMetaboprivate
charge_upper_bound_FeatureFindingMetaboprivate
check_defaults_DefaultParamHandlerprotected
chrom_fwhm_FeatureFindingMetaboprivate
CMD enum valueProgressLogger
computeAveragineSimScore_(const std::vector< double > &, const double &)FeatureFindingMetaboprivate
computeCosineSim_(const std::vector< double > &, const std::vector< double > &)FeatureFindingMetaboprivate
computeOLSCoeff_(const std::vector< double > &, const std::vector< double > &)FeatureFindingMetaboprivate
current_logger_ProgressLoggermutableprotected
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
disable_isotope_filtering_FeatureFindingMetaboprivate
enable_RT_filtering_FeatureFindingMetaboprivate
endProgress() const ProgressLogger
error_name_DefaultParamHandlerprotected
FeatureFindingMetabo()FeatureFindingMetabo
findLocalFeatures_(std::vector< MassTrace * > &, std::vector< FeatureHypothesis > &)FeatureFindingMetaboprivate
getDefaults() const DefaultParamHandler
getLogType() const ProgressLogger
getName() const DefaultParamHandler
getParameters() const DefaultParamHandler
getSubsections() const DefaultParamHandler
GUI enum valueProgressLogger
isLegalIsotopePattern2_(FeatureHypothesis &)FeatureFindingMetaboprivate
isLegalIsotopePattern_(FeatureHypothesis &)FeatureFindingMetaboprivate
isotope_filt_svm_FeatureFindingMetaboprivate
isotope_model_FeatureFindingMetaboprivate
last_invoke_ProgressLoggermutableprotected
loadIsotopeModel_(const String &)FeatureFindingMetaboprivate
local_mz_range_FeatureFindingMetaboprivate
local_rt_range_FeatureFindingMetaboprivate
LogType enum nameProgressLogger
logTypeToFactoryName_(LogType type)ProgressLoggerprotectedstatic
metabo_iso_noisemodel_FeatureFindingMetaboprivate
NONE enum valueProgressLogger
OpenMS::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
OpenMS::ProgressLogger::operator=(const ProgressLogger &other)ProgressLogger
operator==(const DefaultParamHandler &rhs) const DefaultParamHandlervirtual
param_DefaultParamHandlerprotected
ProgressLogger()ProgressLogger
ProgressLogger(const ProgressLogger &other)ProgressLogger
recursion_depth_ProgressLoggerprotectedstatic
report_summed_ints_FeatureFindingMetaboprivate
run(std::vector< MassTrace > &, FeatureMap &)FeatureFindingMetabo
scoreMZ2_(const MassTrace &, const MassTrace &, Size, Size)FeatureFindingMetaboprivate
scoreMZ_(const MassTrace &, const MassTrace &, Size, Size)FeatureFindingMetaboprivate
scoreRT_(const MassTrace &, const MassTrace &)FeatureFindingMetaboprivate
setLogType(LogType type) const ProgressLogger
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
setProgress(SignedSize value) const ProgressLogger
startProgress(SignedSize begin, SignedSize end, const String &label) const ProgressLogger
subsections_DefaultParamHandlerprotected
svm_feat_centers_FeatureFindingMetaboprivate
svm_feat_scales_FeatureFindingMetaboprivate
total_intensity_FeatureFindingMetaboprivate
type_ProgressLoggermutableprotected
updateMembers_()FeatureFindingMetaboprotectedvirtual
use_smoothed_intensities_FeatureFindingMetaboprivate
warn_empty_defaults_DefaultParamHandlerprotected
~DefaultParamHandler()DefaultParamHandlervirtual
~FeatureFindingMetabo()FeatureFindingMetabovirtual
~ProgressLogger()ProgressLogger

OpenMS / TOPP release 2.0.0 Documentation generated on Wed Mar 30 2016 12:49:27 using doxygen 1.8.11