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CompNovoIonScoringBase Member List

This is the complete list of members for CompNovoIonScoringBase, including all inherited members.

addSingleChargedIons_(Map< double, IonScore > &ion_scores, PeakSpectrum &CID_spec)CompNovoIonScoringBaseprotected
check_defaults_DefaultParamHandlerprotected
CHILD enum valueCompNovoIonScoringBase
classifyIsotopes_(const PeakSpectrum &spec, PeakSpectrum::ConstIterator it)CompNovoIonScoringBaseprotected
CompNovoIonScoringBase()CompNovoIonScoringBase
CompNovoIonScoringBase(const CompNovoIonScoringBase &source)CompNovoIonScoringBase
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
error_name_DefaultParamHandlerprotected
fragment_mass_tolerance_CompNovoIonScoringBaseprotected
getDefaults() const DefaultParamHandler
getName() const DefaultParamHandler
getParameters() const DefaultParamHandler
getSubsections() const DefaultParamHandler
initIsotopeDistributions_()CompNovoIonScoringBaseprotected
isotope_distributions_CompNovoIonScoringBaseprotected
IsotopeType enum nameCompNovoIonScoringBase
LONE enum valueCompNovoIonScoringBase
operator=(const CompNovoIonScoringBase &source)CompNovoIonScoringBase
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) const DefaultParamHandlervirtual
param_DefaultParamHandlerprotected
PARENT enum valueCompNovoIonScoringBase
scoreIsotopes(const PeakSpectrum &CID_spec, PeakSpectrum::ConstIterator it, Size charge)CompNovoIonScoringBase
scoreIsotopes_(const PeakSpectrum &spec, PeakSpectrum::ConstIterator it, Map< double, IonScore > &CID_nodes, Size charge=1)CompNovoIonScoringBaseprotected
scoreWitnessSet_(Size charge, double precursor_weight, Map< double, IonScore > &CID_nodes, const PeakSpectrum &CID_orig_spec)=0CompNovoIonScoringBaseprotectedpure virtual
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
subsections_DefaultParamHandlerprotected
updateMembers_()CompNovoIonScoringBaseprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
~CompNovoIonScoringBase()CompNovoIonScoringBasevirtual
~DefaultParamHandler()DefaultParamHandlervirtual

OpenMS / TOPP release 2.0.0 Documentation generated on Wed Mar 30 2016 12:49:27 using doxygen 1.8.11