Home  · Classes  · Annotated Classes  · Modules  · Members  · Namespaces  · Related Pages
AScore Member List

This is the complete list of members for AScore, including all inherited members.

AScore()AScore
compute(PeptideHit &hit, RichPeakSpectrum &real_spectrum, double fragment_mass_tolerance, bool fragment_mass_unit_ppm) const AScore
computeCumulativeScore(Size N, Size n, double p) const AScore
computePermutations(std::vector< Size > sites, Int n_phosphorylation_events) const AScore
computeSiteDeterminingIons(std::vector< RichPeakSpectrum > &th_spectra, ProbablePhosphoSites &candidates, Int charge, std::vector< RichPeakSpectrum > &site_determining_ions) const AScore
determineHighestScoringPermutations(const std::vector< std::vector< double > > &peptide_site_scores, std::vector< ProbablePhosphoSites > &sites, const std::vector< std::vector< Size > > &permutations) const AScore
getSites(AASequence &without_phospho) const AScore
numberOfMatchedIons(const RichPeakSpectrum &th, const RichPeakSpectrum &windows, Size depth, double fragment_mass_tolerance, bool fragment_mass_tolerance_ppm=false) const AScore
peptideScore(const std::vector< double > &scores) const AScore
~AScore()AScore

OpenMS / TOPP release 2.0.0 Documentation generated on Wed Mar 30 2016 12:49:26 using doxygen 1.8.11