public class GenotypeReader extends Object
Modifier and Type | Class | Description |
---|---|---|
static class |
GenotypeReader.VariantIterator |
Deprecated.
Small class to encapsulate an iterator over variants, optionally with a sequence dictionary.
|
Constructor | Description |
---|---|
GenotypeReader() |
Deprecated.
|
Modifier and Type | Method | Description |
---|---|---|
GenotypeReader.VariantIterator |
read(File file) |
Deprecated.
Please use VCFFileReader in Picard-public instead of this class.
|
GenotypeReader.VariantIterator |
read(File file,
htsjdk.samtools.util.IntervalList intervals) |
Deprecated.
Please use VCFFileReader in Picard-public instead of this class.
|
public GenotypeReader.VariantIterator read(File file)
public GenotypeReader.VariantIterator read(File file, htsjdk.samtools.util.IntervalList intervals)