public class ClocsFileReader extends AbstractIlluminaPositionFileReader
AbstractIlluminaPositionFileReader.PositionInfo
MAX_POS, MIN_POS
Constructor | Description |
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ClocsFileReader(File clocsFile) |
Modifier and Type | Method | Description |
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void |
close() |
|
boolean |
hasNext() |
Return true if the file has more elements to return, false otherwise
|
protected String |
makeExceptionMsg() |
Create a string that will be included in any NoSuchElementException thrown by the next() method
|
protected AbstractIlluminaPositionFileReader.PositionInfo |
unsafeNextInfo() |
Grab the next set of offset values, decompress them.
|
getFile, getLane, getTile, next, remove
forEachRemaining
public ClocsFileReader(File clocsFile)
protected AbstractIlluminaPositionFileReader.PositionInfo unsafeNextInfo()
unsafeNextInfo
in class AbstractIlluminaPositionFileReader
protected String makeExceptionMsg()
AbstractIlluminaPositionFileReader
makeExceptionMsg
in class AbstractIlluminaPositionFileReader
public boolean hasNext()
AbstractIlluminaPositionFileReader
hasNext
in class AbstractIlluminaPositionFileReader
public void close()