BestEndMapqPrimaryAlignmentStrategy
, BestMapqPrimaryAlignmentSelectionStrategy
, EarliestFragmentPrimaryAlignmentSelectionStrategy
, MostDistantPrimaryAlignmentSelectionStrategy
public interface PrimaryAlignmentSelectionStrategy
Modifier and Type | Method | Description |
---|---|---|
void |
pickPrimaryAlignment(picard.sam.HitsForInsert hitsForInsert) |
When this method returns, one alignment has been marked as primary according to the implementation's strategy.
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