public class PosFileReader extends AbstractIlluminaPositionFileReader
AbstractIlluminaPositionFileReader.PositionInfo
MAX_POS, MIN_POS
Constructor | Description |
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PosFileReader(File posFile) |
Modifier and Type | Method | Description |
---|---|---|
void |
close() |
|
boolean |
hasNext() |
Return true if the file has more elements to return, false otherwise
|
protected String |
makeExceptionMsg() |
Create a string that will be included in any NoSuchElementException thrown by the next() method
|
protected AbstractIlluminaPositionFileReader.PositionInfo |
unsafeNextInfo() |
Read a line of text and parse it into two float values, create a PositionInfo and return it
|
getFile, getLane, getTile, next, remove
forEachRemaining
public PosFileReader(File posFile)
protected AbstractIlluminaPositionFileReader.PositionInfo unsafeNextInfo()
unsafeNextInfo
in class AbstractIlluminaPositionFileReader
protected String makeExceptionMsg()
AbstractIlluminaPositionFileReader
makeExceptionMsg
in class AbstractIlluminaPositionFileReader
public boolean hasNext()
AbstractIlluminaPositionFileReader
hasNext
in class AbstractIlluminaPositionFileReader
public void close()