Serializable
, Comparable<GenotypeConcordanceStateCodes>
public enum GenotypeConcordanceStateCodes extends Enum<GenotypeConcordanceStateCodes>
Enum Constant | Description |
---|---|
GT_FILTERED_CODE |
|
HET_REF_VAR1_CODE |
|
HET_VAR1_VAR2_CODE |
|
HOM_REF_CODE |
|
HOM_VAR1_CODE |
|
INCOMPARABLE_CODE |
|
IS_MIXED_CODE |
|
LOW_DP_CODE |
|
LOW_GQ_CODE |
|
MISSING_CODE |
These codes allow for constants in the truth state enum and the call state enum to be compared.
|
NO_CALL_CODE |
|
VC_FILTERED_CODE |
Modifier and Type | Method | Description |
---|---|---|
static GenotypeConcordanceStateCodes |
valueOf(String name) |
Returns the enum constant of this type with the specified name.
|
static GenotypeConcordanceStateCodes[] |
values() |
Returns an array containing the constants of this enum type, in
the order they are declared.
|
public static final GenotypeConcordanceStateCodes MISSING_CODE
public static final GenotypeConcordanceStateCodes HOM_REF_CODE
public static final GenotypeConcordanceStateCodes HET_REF_VAR1_CODE
public static final GenotypeConcordanceStateCodes HET_VAR1_VAR2_CODE
public static final GenotypeConcordanceStateCodes HOM_VAR1_CODE
public static final GenotypeConcordanceStateCodes NO_CALL_CODE
public static final GenotypeConcordanceStateCodes LOW_GQ_CODE
public static final GenotypeConcordanceStateCodes LOW_DP_CODE
public static final GenotypeConcordanceStateCodes VC_FILTERED_CODE
public static final GenotypeConcordanceStateCodes GT_FILTERED_CODE
public static final GenotypeConcordanceStateCodes IS_MIXED_CODE
public static final GenotypeConcordanceStateCodes INCOMPARABLE_CODE
public static GenotypeConcordanceStateCodes[] values()
for (GenotypeConcordanceStateCodes c : GenotypeConcordanceStateCodes.values()) System.out.println(c);
public static GenotypeConcordanceStateCodes valueOf(String name)
name
- the name of the enum constant to be returned.IllegalArgumentException
- if this enum type has no constant with the specified nameNullPointerException
- if the argument is null