AlleleBalanceFilter
, FisherStrandFilter
, QdFilter
public interface VariantFilter
Modifier and Type | Method | Description |
---|---|---|
String |
filter(htsjdk.variant.variantcontext.VariantContext ctx) |
Check to see if the VariantContext should have a filter applied to it.
|
List<htsjdk.variant.vcf.VCFFilterHeaderLine> |
headerLines() |
Return VCF header lines that define filters that may be applied by the VariantFilter.
|
String filter(htsjdk.variant.variantcontext.VariantContext ctx)
List<htsjdk.variant.vcf.VCFFilterHeaderLine> headerLines()