Serializable
public class AlignmentBlock extends Object implements Serializable
Modifier and Type | Field | Description |
---|---|---|
static long |
serialVersionUID |
Modifier and Type | Method | Description |
---|---|---|
int |
getLength() |
The number of contiguous bases aligned to the reference.
|
int |
getReadStart() |
The first, 1-based, base in the read that is aligned to the reference reference.
|
int |
getReferenceStart() |
The first, 1-based, position in the reference to which the read is aligned.
|
public static final long serialVersionUID
public int getReadStart()
public int getReferenceStart()
public int getLength()