public class SubstitutionMatrix extends Object
Modifier and Type | Field | Description |
---|---|---|
static byte[] |
BASES |
Constructor | Description |
---|---|
SubstitutionMatrix(byte[] matrix) |
|
SubstitutionMatrix(long[][] frequencies) |
Modifier and Type | Method | Description |
---|---|---|
byte |
base(byte refBase,
byte code) |
|
byte |
code(byte refBase,
byte readBase) |
|
byte[] |
getEncodedMatrix() |
|
String |
toString() |