public class FullBEDFeature.Exon extends Object
Constructor | Description |
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Exon(int start,
int end) |
Constructs ...
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Modifier and Type | Method | Description |
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int |
getCdEnd() |
Method description
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int |
getCdStart() |
Method description
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int |
getCodingLength() |
Method description
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int |
getNumber() |
|
String |
getValueString(double position) |
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void |
setCodingEnd(int codingEnd) |
Method description
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void |
setCodingStart(int codingStart) |
Method description
|
void |
setMrnaBase(int base) |
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void |
setNumber(int number) |
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void |
setPhase(int phase) |
Method description
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void |
setReadingFrame(int offset) |
Method description
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void |
setUTR(boolean utr) |
Flag indicating that the entire exon is the UTR.
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public void setMrnaBase(int base)
public void setUTR(boolean utr)
utr
- public void setCodingStart(int codingStart)
codingStart
- public void setCodingEnd(int codingEnd)
codingEnd
- public void setReadingFrame(int offset)
offset
- public void setPhase(int phase)
phase
- public int getCdStart()
public int getCdEnd()
public int getCodingLength()
public String getValueString(double position)
public int getNumber()
public void setNumber(int number)