Serializable
, Comparable<GenotypeType>
public enum GenotypeType extends Enum<GenotypeType>
Enum Constant | Description |
---|---|
HET |
The sample is heterozygous, with at least one ref and at least one one alt in any order
|
HOM_REF |
The sample is homozygous reference
|
HOM_VAR |
All alleles are non-reference
|
MIXED |
Some chromosomes are NO_CALL and others are called
|
NO_CALL |
The sample is no-called (all alleles are NO_CALL
|
UNAVAILABLE |
There is no allele data availble for this sample (alleles.isEmpty)
|
Modifier and Type | Method | Description |
---|---|---|
static GenotypeType |
valueOf(String name) |
Returns the enum constant of this type with the specified name.
|
static GenotypeType[] |
values() |
Returns an array containing the constants of this enum type, in
the order they are declared.
|
public static final GenotypeType NO_CALL
public static final GenotypeType HOM_REF
public static final GenotypeType HET
public static final GenotypeType HOM_VAR
public static final GenotypeType UNAVAILABLE
public static final GenotypeType MIXED
public static GenotypeType[] values()
for (GenotypeType c : GenotypeType.values()) System.out.println(c);
public static GenotypeType valueOf(String name)
name
- the name of the enum constant to be returned.IllegalArgumentException
- if this enum type has no constant with the specified nameNullPointerException
- if the argument is null