AutoCloseable
, Closeable
CRAMFileWriter
, SAMFileWriterImpl
, SAMTextWriter
public interface SAMFileWriter extends Closeable
Modifier and Type | Method | Description |
---|---|---|
void |
addAlignment(SAMRecord alignment) |
|
void |
close() |
Must be called to flush or file will likely be defective.
|
SAMFileHeader |
getFileHeader() |
|
void |
setProgressLogger(ProgressLoggerInterface progress) |
Sets a ProgressLogger on this writer.
|
void addAlignment(SAMRecord alignment)
SAMFileHeader getFileHeader()
void setProgressLogger(ProgressLoggerInterface progress)
void close()
close
in interface AutoCloseable
close
in interface Closeable