public class SearcherUtils
extends java.lang.Object
| Constructor | Description |
|---|---|
SearcherUtils() |
| Modifier and Type | Method | Description |
|---|---|---|
static int |
createMatchups(int numberOfSites,
int numberOfStates,
int[] sitePatternMatchup,
int[] patternStateMatchup,
int[] sequence) |
Fill in matchup arrays
|
static java.lang.String[][] |
split(java.lang.String[] leafNames,
MersenneTwisterFast r) |
public static final int createMatchups(int numberOfSites,
int numberOfStates,
int[] sitePatternMatchup,
int[] patternStateMatchup,
int[] sequence)
numberOfSites - The number of sitesnumberOfStates - The number of statessitePatternMatchup - Should be of length numberOfSitespatternStateMatchup - Should be of length numberOfStates+1sequence - the sequencepublic static final java.lang.String[][] split(java.lang.String[] leafNames,
MersenneTwisterFast r)