IdGroup, Parameterized, java.io.Serializable, Tree, Units, UnitsProviderClockTree, DemographicClockTree, LogParameterizedTree, MutationRateModelTree, UnconstrainedTreepublic interface ParameterizedTree extends Parameterized, Tree
| Modifier and Type | Interface | Description |
|---|---|---|
static interface |
ParameterizedTree.Factory |
Factory interface
|
static class |
ParameterizedTree.ParameterizedTreeBase |
For parameterisations that work by adjusting a base tree (that is, they aren't really
tree's themselves...)
|
Parameterized.Null, Parameterized.ParameterizedBase, Parameterized.ParameterizedUser, Parameterized.UtilsTree.TreeBaseDAYS, EXPECTED_SUBSTITUTIONS, GENERATIONS, MONTHS, SAMPLE, SHORT_UNIT_NAMES, UNIT_NAMES, UNKNOWN, YEARS| Modifier and Type | Method | Description |
|---|---|---|
OrthogonalHints |
getOrthogonalHints() |
|
java.lang.String |
getParameterizationInfo() |
getIdCount, getIdentifier, setIdentifier, whichIdNumbergetDefaultValue, getLowerLimit, getNumParameters, getParameter, getUpperLimit, setParameter, setParameterSEcreateNodeList, getAttribute, getCopy, getExternalNode, getExternalNodeCount, getInternalNode, getInternalNodeCount, getRoot, getUnits, setAttribute, setRootOrthogonalHints getOrthogonalHints()
java.lang.String getParameterizationInfo()