| Package | Description |
|---|---|
| pal.supgma |
| Modifier and Type | Method | Description |
|---|---|---|
SUPGMABase.PopulationParameters |
SUPGMABase.process(DistanceMatrixAccess alternativeSource,
AlgorithmCallback callback,
LMSSolver solver) |
|
SUPGMABase.PopulationParameters |
SUPGMABase.process(AlgorithmCallback callback,
LMSSolver solver) |
| Modifier and Type | Method | Description |
|---|---|---|
Tree |
SUPGMABase.generateAlignmentBootstrappedSUPGMATree(AlgorithmCallback callback,
ClusterTree.ClusteringMethod cm,
SUPGMABase.PopulationParameters pp,
int numberOfReplicates,
LMSSolver solver) |