java.io.SerializableAlignment, AnnotationAlignment, CharacterAlignment, ParameterizedTree, TreeAbstractAlignment, AlignmentDistanceMatrix, AlignmentReaders.PhylipClustalAlignment, AlignmentReaders.UnalignedAlignment, BootstrappedAlignment, ClockTree, ClusterTree, ConcatenatedAlignment, ConcatenatedAnnotatedAlignment, DemographicClockTree, DistanceMatrix, GapBalancedAlignment, IndelAlignment, IndelAnnotatedAlignment, JukesCantorDistanceMatrix, JumbledAlignment, LogParameterizedTree, MultiLocusAnnotatedAlignment, MutationRateModelTree, NeighborJoiningTree, ParameterizedTree.ParameterizedTreeBase, ReadAlignment, ReadAlignmentOld, ReadDistanceMatrix, ReadTree, SimpleAlignment, SimpleAnnotatedAlignment, SimpleCharacterAlignment, SimpleIdGroup, SimpleTree, SimulatedAlignment, SitePattern, StrippedAlignment, StrippedAnnotatedAlignment, SUPGMADistanceMatrix, SUPGMATree, TimeOrderCharacterData, Tree.TreeBase, TreeDistanceMatrix, UnconstrainedTree, UPGMATreepublic interface IdGroup
extends java.io.Serializable
| Modifier and Type | Interface | Description |
|---|---|---|
static class |
IdGroup.Utils |
| Modifier and Type | Method | Description |
|---|---|---|
int |
getIdCount() |
Returns the number of identifiers in this group
|
Identifier |
getIdentifier(int i) |
Returns the ith identifier.
|
void |
setIdentifier(int i,
Identifier id) |
Sets the ith identifier.
|
int |
whichIdNumber(java.lang.String name) |
returns the index of the identifier with the given name.
|
int getIdCount()
Identifier getIdentifier(int i)
void setIdentifier(int i,
Identifier id)
int whichIdNumber(java.lang.String name)