protected class FatCatUserArgumentProcessor.FatCatStartupParams extends StartupParameters
| Constructor | Description |
|---|---|
FatCatStartupParams() |
| Modifier and Type | Method | Description |
|---|---|---|
double |
getDisCut() |
|
int |
getFragLen() |
|
int |
getMaxTra() |
|
java.lang.Double |
getRmsdCut() |
|
boolean |
isFlexible() |
|
void |
setDisCut(double disCut) |
|
void |
setFlexible(boolean flexible) |
|
void |
setFragLen(int fragLen) |
|
void |
setMaxTra(int maxTra) |
|
void |
setRmsdCut(java.lang.Double rmsdCut) |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, waitgetAlignPairs, getCacheFilePath, getFile1, getFile2, getNrCPU, getOutFile, getPdb1, getPdb2, getPdbFilePath, getSaveOutputDir, getSearchFile, getShowDBresult, isAutoFetch, isDomainSplit, isOutputPDB, isPdbDirSplit, isPrintCE, isPrintFatCat, isPrintXML, isShow3d, isShowMenu, setAlignPairs, setAutoFetch, setCacheFilePath, setDomainSplit, setFile1, setFile2, setNrCPU, setOutFile, setOutputPDB, setPdb1, setPdb2, setPdbDirSplit, setPdbFilePath, setPrintCE, setPrintFatCat, setPrintXML, setSaveOutputDir, setSearchFile, setShow3d, setShowDBresult, setShowMenu, toStringpublic int getFragLen()
public void setFragLen(int fragLen)
public java.lang.Double getRmsdCut()
public void setRmsdCut(java.lang.Double rmsdCut)
public double getDisCut()
public void setDisCut(double disCut)
public int getMaxTra()
public void setMaxTra(int maxTra)
public boolean isFlexible()
public void setFlexible(boolean flexible)