Performs an ProteinIdentification with PILIS
pot. predecessor tools | ![]() ![]() | pot. successor tools |
PILISModelTrainer | ConsensusID | |
IDMapper |
The PILISIdentification TOPP tool performs a ProteinIdentification run with the PILIS ProteinIdentification engine. As input the file given in the in parameters is used. The identifications are written into an idXML file given in the out parameter. Additionally the model_file must be specified. To perform a search also a peptide database file should be used,given in the peptide_db_file parameter. This should contain a peptide in a separate line, either only the sequence or additionally with weight and charge in the second and third column.
The command line parameters of this tool are:
INI file documentation of this tool:
OpenMS / TOPP release 1.11.1 | Documentation generated on Mon Aug 18 2014 14:41:09 using doxygen 1.8.7 |