Home  · Classes  · Annotated Classes  · Modules  · Members  · Namespaces  · Related Pages
Digestor

Digests a protein database in-silico.

pot. predecessor tools $ \longrightarrow $ Digestor $ \longrightarrow $ pot. successor tools
none (FASTA input) IDFilter (peptide blacklist)

This application is used to digest a protein database to get all peptides given a cleavage enzyme. At the moment only trypsin is supported.

The output can be used as a blacklist filter input to IDFilter, to remove certain peptides.

The command line parameters of this tool are:

INI file documentation of this tool:


OpenMS / TOPP release 1.11.1 Documentation generated on Mon Aug 18 2014 14:41:10 using doxygen 1.8.7