sbuild (Debian sbuild) 0.62.6 (07 Dec 2011) on build02.raspbian.lan ╔══════════════════════════════════════════════════════════════════════════════╗ ║ rheolef 5.93-2 (armhf) 15 May 2012 07:00 ║ ╚══════════════════════════════════════════════════════════════════════════════╝ Package: rheolef Version: 5.93-2 Source Version: 5.93-2 Distribution: testing Architecture: armhf I: NOTICE: Log filtering will replace 'build/rheolef-z2AIe9/rheolef-5.93' with '«PKGBUILDDIR»' I: NOTICE: Log filtering will replace 'build/rheolef-z2AIe9' with '«BUILDDIR»' I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/testing-armhf-sbuild-8ce011a5-1175-4dcf-ae90-fb278d2e7a3f' with '«CHROOT»' ┌──────────────────────────────────────────────────────────────────────────────┐ │ Update chroot │ └──────────────────────────────────────────────────────────────────────────────┘ Hit http://repo.raspbian.lan testing InRelease Hit http://repo.raspbian.lan testing/main Sources Hit http://repo.raspbian.lan testing/main armhf Packages Ign http://repo.raspbian.lan testing/main TranslationIndex Ign http://repo.raspbian.lan testing/main Translation-en Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Fetch source files │ └──────────────────────────────────────────────────────────────────────────────┘ Check APT ───────── Checking available source versions... Download source files with APT ────────────────────────────── Reading package lists... Building dependency tree... Reading state information... NOTICE: 'rheolef' packaging is maintained in the 'Svn' version control system at: svn://svn.debian.org/svn/debian-science/packages/rheolef/trunk/ Need to get 13.8 MB of source archives. Get:1 http://repo.raspbian.lan/raspbian/ testing/main rheolef 5.93-2 (dsc) [1745 B] Get:2 http://repo.raspbian.lan/raspbian/ testing/main rheolef 5.93-2 (tar) [13.8 MB] Get:3 http://repo.raspbian.lan/raspbian/ testing/main rheolef 5.93-2 (diff) [6263 B] Fetched 13.8 MB in 1s (10.5 MB/s) Download complete and in download only mode Check arch ────────── Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-6UjuRc/apt_archive/sbuild-build-depends-core-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install core build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy debconf: delaying package configuration, since apt-utils is not installed 0 upgraded, 1 newly installed, 0 to remove and 13 not upgraded. Need to get 0 B/706 B of archives. After this operation, 0 B of additional disk space will be used. Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 10670 files and directories currently installed.) Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 7), autoconf, automake, libtool, libltdl-dev | libltdl3-dev, flex, bison, xutils-dev, libboost-dev, libboost-iostreams-dev, libboost-serialization-dev, libginac-dev, ginac-tools, libsuitesparse-dev, libstdc++6, texi2html, texinfo, texlive-latex-recommended, texlive-latex-extra, texlive-math-extra, texlive-font-utils, ghostscript, gnuplot, xfig, transfig, imagemagick, graphviz Filtered Build-Depends: libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 7), autoconf, automake, libtool, libltdl-dev, flex, bison, xutils-dev, libboost-dev, libboost-iostreams-dev, libboost-serialization-dev, libginac-dev, ginac-tools, libsuitesparse-dev, libstdc++6, texi2html, texinfo, texlive-latex-recommended, texlive-latex-extra, texlive-math-extra, texlive-font-utils, ghostscript, gnuplot, xfig, transfig, imagemagick, graphviz dpkg-deb: building package `sbuild-build-depends-rheolef-dummy' in `/«BUILDDIR»/resolver-Udjj2s/apt_archive/sbuild-build-depends-rheolef-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install rheolef build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autoconf automake autotools-dev bison bsdmainutils debhelper ed file flex fontconfig fontconfig-config gawk gettext gettext-base ghostscript ginac-tools gnuplot gnuplot-nox gnuplot-x11 graphviz groff-base gs-cjk-resource gsfonts html2text imagemagick imagemagick-common install-info intltool-debian libamd2.2.0 libatk1.0-0 libatk1.0-data libaudio2 libavahi-client3 libavahi-common-data libavahi-common3 libbison-dev libblas-dev libblas3gf libboost-dev libboost-iostreams-dev libboost-iostreams1.49-dev libboost-iostreams1.49.0 libboost-regex1.49-dev libboost-regex1.49.0 libboost-serialization-dev libboost-serialization1.49-dev libboost-serialization1.49.0 libboost1.49-dev libbsd0 libbtf1.1.0 libcairo2 libcamd2.2.0 libccolamd2.7.1 libcdt4 libcgraph5 libcholmod1.7.1 libcln-dev libcln6 libcolamd2.7.1 libcroco3 libcsparse2.2.3 libcups2 libcupsimage2 libcxsparse2.2.3 libdatrie1 libdbus-1-3 libdrm2 libedit2 libexpat1 libffi5 libfontconfig1 libfreetype6 libgcrypt11 libgd2-noxpm libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran3 libginac-dev libginac2 libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglu1-mesa libgmp-dev libgmpxx4ldbl libgnutls26 libgpg-error0 libgraph4 libgraphite3 libgs9 libgs9-common libgssapi-krb5-2 libgtk2.0-0 libgtk2.0-common libgvc5 libgvpr1 libice6 libicu-dev libicu48 libidn11 libijs-0.35 libjasper1 libjbig0 libjbig2dec0 libjpeg8 libk5crypto3 libkeyutils1 libklu1.1.0 libkpathsea6 libkrb5-3 libkrb5support0 liblapack-dev liblapack3gf liblcms1 liblcms2-2 libldl2.0.1 liblqr-1-0 libltdl-dev libltdl7 liblua5.1-0 libmagic1 libmagickcore5 libmagickwand5 libmng1 libopenjpeg2 libp11-kit0 libpango1.0-0 libpaper-utils libpaper1 libpathplan4 libpcre3 libpipeline1 libpixman-1-0 libpng12-0 libpoppler13 libptexenc1 libqt4-dbus libqt4-network libqt4-svg libqt4-xml libqtcore4 libqtgui4 libsigsegv2 libsm6 libsuitesparse-dev libtasn1-3 libthai-data libthai0 libtiff4 libtool libumfpack5.4.0 libunistring0 libwxbase2.8-0 libwxgtk2.8-0 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxdot4 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxt6 libxxf86vm1 luatex m4 man-db mime-support po-debconf preview-latex-style qdbus shared-mime-info tex-common texi2html texinfo texlive-base texlive-binaries texlive-common texlive-doc-base texlive-font-utils texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-math-extra texlive-pictures transfig ttf-dejavu-core ttf-marvosym x11-common xaw3dg xfig xutils-dev Suggested packages: autoconf2.13 autoconf-archive gnu-standards autoconf-doc bison-doc wamerican wordlist whois vacation dh-make gawk-doc gettext-doc ghostscript-cups ghostscript-x hpijs gnuplot-doc graphviz-doc fonts-ipafont-mincho fonts-ipafont-gothic ttf-arphic-ukai ttf-arphic-uming fonts-unfonts-core imagemagick-doc autotrace cups-bsd lpr lprng enscript ffmpeg gimp grads hp2xx html2ps libwmf-bin mplayer povray radiance sane-utils texlive-base-bin xdg-utils nas libboost-doc libboost1.49-doc libboost-chrono1.49-dev libboost-date-time1.49-dev libboost-filesystem1.49-dev libboost-graph-parallel1.49-dev libboost-graph1.49-dev libboost-locale1.49-dev libboost-math1.49-dev libboost-mpi1.49-dev libboost-program-options1.49-dev libboost-python1.49-dev libboost-random1.49-dev libboost-signals1.49-dev libboost-system1.49-dev libboost-test1.49-dev libboost-thread1.49-dev libboost-timer1.49-dev libboost-wave1.49-dev xsltproc doxygen docbook-xml docbook-xsl default-jdk fop pi cups-common rng-tools libgd-tools libgmp10-doc libmpfr-dev krb5-doc krb5-user librsvg2-common gvfs icu-doc libjasper-runtime liblcms-utils liblcms2-utils libtool-doc ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp qt4-qtconfig automaken gfortran fortran95-compiler gcj libgnomeprintui2.2-0 less www-browser libmail-box-perl latex2html texlive-generic-recommended texinfo-doc-nonfree perl-tk xpdf-reader pdf-viewer gv postscript-viewer psutils t1utils libfile-which-perl dot2tex xfig-doc gsfonts-x11 spell Recommended packages: curl wget lynx-cur autopoint doc-base groff ttf-liberation cmap-adobe-japan1 cmap-adobe-cns1 cmap-adobe-gb1 cmap-adobe-korea1 cmap-adobe-japan2 libmagickcore5-extra netpbm ufraw-batch info info-browser dbus libginac2-dbg libgl1-mesa-dri libglib2.0-data fonts-droid hicolor-icon-theme libgtk2.0-bin krb5-locales poppler-data xml-core texlive-luatex libmail-sendmail-perl lmodern python ruby wish ps2eps texlive-fonts-recommended-doc tex-gyre tipa texlive-latex-base-doc texlive-latex-extra-doc texpower latex-xcolor texlive-latex-recommended-doc prosper latex-beamer texlive-pictures-doc pgf xfig-libs The following NEW packages will be installed: autoconf automake autotools-dev bison bsdmainutils debhelper ed file flex fontconfig fontconfig-config gawk gettext gettext-base ghostscript ginac-tools gnuplot gnuplot-nox gnuplot-x11 graphviz groff-base gs-cjk-resource gsfonts html2text imagemagick imagemagick-common install-info intltool-debian libamd2.2.0 libatk1.0-0 libatk1.0-data libaudio2 libavahi-client3 libavahi-common-data libavahi-common3 libbison-dev libblas-dev libblas3gf libboost-dev libboost-iostreams-dev libboost-iostreams1.49-dev libboost-iostreams1.49.0 libboost-regex1.49-dev libboost-regex1.49.0 libboost-serialization-dev libboost-serialization1.49-dev libboost-serialization1.49.0 libboost1.49-dev libbsd0 libbtf1.1.0 libcairo2 libcamd2.2.0 libccolamd2.7.1 libcdt4 libcgraph5 libcholmod1.7.1 libcln-dev libcln6 libcolamd2.7.1 libcroco3 libcsparse2.2.3 libcups2 libcupsimage2 libcxsparse2.2.3 libdatrie1 libdbus-1-3 libdrm2 libedit2 libexpat1 libffi5 libfontconfig1 libfreetype6 libgcrypt11 libgd2-noxpm libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran3 libginac-dev libginac2 libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglu1-mesa libgmp-dev libgmpxx4ldbl libgnutls26 libgpg-error0 libgraph4 libgraphite3 libgs9 libgs9-common libgssapi-krb5-2 libgtk2.0-0 libgtk2.0-common libgvc5 libgvpr1 libice6 libicu-dev libicu48 libidn11 libijs-0.35 libjasper1 libjbig0 libjbig2dec0 libjpeg8 libk5crypto3 libkeyutils1 libklu1.1.0 libkpathsea6 libkrb5-3 libkrb5support0 liblapack-dev liblapack3gf liblcms1 liblcms2-2 libldl2.0.1 liblqr-1-0 libltdl-dev libltdl7 liblua5.1-0 libmagic1 libmagickcore5 libmagickwand5 libmng1 libopenjpeg2 libp11-kit0 libpango1.0-0 libpaper-utils libpaper1 libpathplan4 libpcre3 libpipeline1 libpixman-1-0 libpng12-0 libpoppler13 libptexenc1 libqt4-dbus libqt4-network libqt4-svg libqt4-xml libqtcore4 libqtgui4 libsigsegv2 libsm6 libsuitesparse-dev libtasn1-3 libthai-data libthai0 libtiff4 libtool libumfpack5.4.0 libunistring0 libwxbase2.8-0 libwxgtk2.8-0 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxdot4 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxt6 libxxf86vm1 luatex m4 man-db mime-support po-debconf preview-latex-style qdbus sbuild-build-depends-rheolef-dummy shared-mime-info tex-common texi2html texinfo texlive-base texlive-binaries texlive-common texlive-doc-base texlive-font-utils texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-math-extra texlive-pictures transfig ttf-dejavu-core ttf-marvosym x11-common xaw3dg xfig xutils-dev 0 upgraded, 208 newly installed, 0 to remove and 13 not upgraded. Need to get 20.8 MB/196 MB of archives. After this operation, 560 MB of additional disk space will be used. Get:1 http://repo.raspbian.lan/raspbian/ testing/main install-info armhf 4.13a.dfsg.1-10 [146 kB] Get:2 http://repo.raspbian.lan/raspbian/ testing/main libcln6 armhf 1.3.2-1.2 [548 kB] Get:3 http://repo.raspbian.lan/raspbian/ testing/main libginac2 armhf 1.6.2-1 [1025 kB] Get:4 http://repo.raspbian.lan/raspbian/ testing/main ginac-tools armhf 1.6.2-1 [105 kB] Get:5 http://repo.raspbian.lan/raspbian/ testing/main gnuplot-nox armhf 4.6.0-5 [1074 kB] Get:6 http://repo.raspbian.lan/raspbian/ testing/main gnuplot-x11 armhf 4.6.0-5 [836 kB] Get:7 http://repo.raspbian.lan/raspbian/ testing/main gnuplot all 4.6.0-5 [229 kB] Get:8 http://repo.raspbian.lan/raspbian/ testing/main libcln-dev armhf 1.3.2-1.2 [1274 kB] Get:9 http://repo.raspbian.lan/raspbian/ testing/main libginac-dev armhf 1.6.2-1 [2034 kB] Get:10 http://repo.raspbian.lan/raspbian/ testing/main texlive-math-extra all 2011.20120424-1 [12.7 MB] Get:11 http://repo.raspbian.lan/raspbian/ testing/main xaw3dg armhf 1.5+E-18.1 [153 kB] Get:12 http://repo.raspbian.lan/raspbian/ testing/main xfig armhf 1:3.2.5.b-2 [695 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 20.8 MB in 2s (10.1 MB/s) Selecting previously unselected package libpcre3:armhf. (Reading database ... 10670 files and directories currently installed.) Unpacking libpcre3:armhf (from .../libpcre3_1%3a8.30-5_armhf.deb) ... Selecting previously unselected package libpipeline1:armhf. Unpacking libpipeline1:armhf (from .../libpipeline1_1.2.1-1_armhf.deb) ... Selecting previously unselected package libbsd0:armhf. Unpacking libbsd0:armhf (from .../libbsd0_0.3.0-2_armhf.deb) ... Selecting previously unselected package libedit2:armhf. Unpacking libedit2:armhf (from .../libedit2_2.11-20080614-3_armhf.deb) ... Selecting previously unselected package libgpg-error0:armhf. Unpacking libgpg-error0:armhf (from .../libgpg-error0_1.10-3_armhf.deb) ... Selecting previously unselected package libgcrypt11:armhf. Unpacking libgcrypt11:armhf (from .../libgcrypt11_1.5.0-3_armhf.deb) ... Selecting previously unselected package libp11-kit0:armhf. Unpacking libp11-kit0:armhf (from .../libp11-kit0_0.12-3_armhf.deb) ... Selecting previously unselected package libtasn1-3:armhf. 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Adding 'diversion of /usr/bin/gnuplot to /usr/bin/gnuplot-nox by gnuplot-x11' Adding 'diversion of /usr/share/man/man1/gnuplot.1.gz to /usr/share/man/man1/gnuplot-nox.1.gz by gnuplot-x11' Selecting previously unselected package gnuplot. Unpacking gnuplot (from .../gnuplot_4.6.0-5_all.deb) ... Selecting previously unselected package libcdt4. Unpacking libcdt4 (from .../libcdt4_2.26.3-10+rpi1_armhf.deb) ... Selecting previously unselected package libcgraph5. Unpacking libcgraph5 (from .../libcgraph5_2.26.3-10+rpi1_armhf.deb) ... Selecting previously unselected package libgraph4. Unpacking libgraph4 (from .../libgraph4_2.26.3-10+rpi1_armhf.deb) ... Selecting previously unselected package libpathplan4. Unpacking libpathplan4 (from .../libpathplan4_2.26.3-10+rpi1_armhf.deb) ... Selecting previously unselected package libxdot4. Unpacking libxdot4 (from .../libxdot4_2.26.3-10+rpi1_armhf.deb) ... Selecting previously unselected package libgvc5. 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Setting up libkrb5-3:armhf (1.10+dfsg~beta1-2) ... Setting up libgssapi-krb5-2:armhf (1.10+dfsg~beta1-2) ... Setting up libidn11:armhf (1.24-2) ... Setting up libmagic1:armhf (5.11-1) ... Setting up libxml2:armhf (2.7.8.dfsg-9) ... Setting up m4 (1.4.16-2) ... Setting up flex (2.5.35-10) ... Setting up gawk (1:4.0.1+dfsg-1) ... Setting up libffi5:armhf (3.0.10-3+b3) ... Setting up libglib2.0-0:armhf (2.32.2-1) ... No schema files found: doing nothing. Setting up libatk1.0-data (2.4.0-2) ... Setting up libatk1.0-0:armhf (2.4.0-2) ... Setting up libxau6:armhf (1:1.0.7-1) ... Setting up x11-common (1:7.6+13) ... All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6:armhf (2:1.0.8-2) ... Setting up libsm6:armhf (2:1.2.1-2) ... Setting up libxdmcp6:armhf (1:1.1.1-1) ... Setting up libxcb1:armhf (1.8.1-1) ... Setting up libx11-data (2:1.4.99.901-2) ... Setting up libx11-6:armhf (2:1.4.99.901-2) ... 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Setting up libxaw7:armhf (2:1.0.10-2) ... Setting up bsdmainutils (9.0.1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up groff-base (1.21-7) ... Setting up libboost-iostreams1.49.0 (1.49.0-2) ... Setting up man-db (2.6.1-2) ... Building database of manual pages ... Setting up file (5.11-1) ... Setting up gettext-base (0.18.1.1-5+rpi1) ... Setting up mime-support (3.52-1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode. Setting up texinfo (4.13a.dfsg.1-10) ... Running mktexlsr. This may take some time. ... done. Setting up autoconf (2.69-1) ... Setting up autotools-dev (20120210.1) ... Setting up automake (1:1.11.5-1) ... update-alternatives: using /usr/bin/automake-1.11 to provide /usr/bin/automake (automake) in auto mode. Setting up libbison-dev:armhf (1:2.5.dfsg-2.1) ... Setting up bison (1:2.5.dfsg-2.1) ... update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode. Setting up html2text (1.3.2a-15) ... Setting up gettext (0.18.1.1-5+rpi1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2) ... Setting up debhelper (9.20120419) ... Setting up ed (1.6-1) ... Setting up libijs-0.35 (0.35-8) ... Setting up libjbig2dec0 (0.11+20120125-1) ... Setting up libpaper1 (1.1.24+nmu1) ... Creating config file /etc/papersize with new version Setting up libgs9-common (9.05~dfsg-5) ... Setting up gsfonts (1:8.11+urwcyr1.0.7~pre44-4.2) ... Setting up libcln6 (1.3.2-1.2) ... Setting up libginac2 (1.6.2-1) ... Setting up ginac-tools (1.6.2-1) ... Setting up libgd2-noxpm (2.0.36~rc1~dfsg-6) ... Setting up gnuplot-nox (4.6.0-5) ... Setting up libqtcore4 (4:4.7.4-3+rpi2) ... Setting up libqt4-xml (4:4.7.4-3+rpi2) ... Setting up libqtgui4 (4:4.7.4-3+rpi2) ... Setting up libqt4-svg (4:4.7.4-3+rpi2) ... Setting up libcdt4 (2.26.3-10+rpi1) ... Setting up libcgraph5 (2.26.3-10+rpi1) ... Setting up libgraph4 (2.26.3-10+rpi1) ... Setting up libpathplan4 (2.26.3-10+rpi1) ... Setting up libxdot4 (2.26.3-10+rpi1) ... Setting up libgvc5 (2.26.3-10+rpi1) ... Setting up libgvpr1 (2.26.3-10+rpi1) ... Setting up graphviz (2.26.3-10+rpi1) ... Setting up imagemagick (8:6.7.4.0-5) ... update-alternatives: using /usr/bin/compare.im6 to provide /usr/bin/compare (compare) in auto mode. update-alternatives: using /usr/bin/animate.im6 to provide /usr/bin/animate (animate) in auto mode. update-alternatives: using /usr/bin/convert.im6 to provide /usr/bin/convert (convert) in auto mode. update-alternatives: using /usr/bin/composite.im6 to provide /usr/bin/composite (composite) in auto mode. update-alternatives: using /usr/bin/conjure.im6 to provide /usr/bin/conjure (conjure) in auto mode. update-alternatives: using /usr/bin/import.im6 to provide /usr/bin/import (import) in auto mode. update-alternatives: using /usr/bin/identify.im6 to provide /usr/bin/identify (identify) in auto mode. update-alternatives: using /usr/bin/stream.im6 to provide /usr/bin/stream (stream) in auto mode. update-alternatives: using /usr/bin/display.im6 to provide /usr/bin/display (display) in auto mode. update-alternatives: using /usr/bin/montage.im6 to provide /usr/bin/montage (montage) in auto mode. update-alternatives: using /usr/bin/mogrify.im6 to provide /usr/bin/mogrify (mogrify) in auto mode. Setting up libamd2.2.0 (1:3.4.0-2) ... Setting up libblas3gf (1.2.20110419-2) ... update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode. Setting up libblas-dev (1.2.20110419-2) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode. Setting up libboost1.49-dev (1.49.0-2) ... Setting up libboost-dev (1.49.0.1) ... Setting up libboost-regex1.49.0 (1.49.0-2) ... Setting up libicu-dev (4.8.1.1-6) ... Setting up libboost-regex1.49-dev (1.49.0-2) ... Setting up libboost-iostreams1.49-dev (1.49.0-2) ... Setting up libboost-iostreams-dev (1.49.0.1) ... Setting up libboost-serialization1.49.0 (1.49.0-2) ... Setting up libboost-serialization1.49-dev (1.49.0-2) ... Setting up libboost-serialization-dev (1.49.0.1) ... Setting up libbtf1.1.0 (1:3.4.0-2) ... Setting up libcamd2.2.0 (1:3.4.0-2) ... Setting up libccolamd2.7.1 (1:3.4.0-2) ... Setting up libcolamd2.7.1 (1:3.4.0-2) ... Setting up liblapack3gf (3.3.1-1) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode. Setting up libcholmod1.7.1 (1:3.4.0-2) ... Setting up libgmp-dev (2:5.0.4+dfsg-1) ... Setting up libcln-dev (1.3.2-1.2) ... Setting up libcsparse2.2.3 (1:3.4.0-2) ... Setting up libcxsparse2.2.3 (1:3.4.0-2) ... Setting up libginac-dev (1.6.2-1) ... Setting up libgraphite3 (1:2.3.1-0.2) ... Setting up libklu1.1.0 (1:3.4.0-2) ... Setting up libkpathsea6 (2011.20120410-1) ... Setting up liblapack-dev (3.3.1-1) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode. Setting up libldl2.0.1 (1:3.4.0-2) ... Setting up libltdl-dev:armhf (2.4.2-1+b2) ... Setting up libpaper-utils (1.1.24+nmu1) ... Setting up libopenjpeg2 (1.3+dfsg-4) ... Setting up libpoppler13 (0.16.7-3) ... Setting up libptexenc1 (2011.20120410-1) ... Setting up libumfpack5.4.0 (1:3.4.0-2) ... Setting up libsuitesparse-dev (1:3.4.0-2) ... Setting up libtool (2.4.2-1+b2) ... Setting up luatex (0.70.1-3) ... texlive-base is not ready, cannot create formats Setting up tex-common (3.10) ... Running mktexlsr. This may take some time... done. texlive-base is not ready, delaying updmap-sys call texlive-base is not ready, skipping fmtutil-sys --all call Setting up preview-latex-style (11.86-10) ... Setting up texi2html (1.82-1) ... Setting up texlive-common (2011.20120424-1) ... Setting up texlive-doc-base (2011.20120424-1) ... Setting up texlive-binaries (2011.20120410-1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode. update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode. Building format(s) --refresh. This may take some time... done. Setting up ttf-marvosym (0.1+dfsg-2) ... Setting up transfig (1:3.2.5.d-3) ... Setting up xaw3dg (1.5+E-18.1) ... Setting up xfig (1:3.2.5.b-2) ... Setting up xutils-dev (1:7.7~1) ... Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Setting up texlive-base (2011.20120424-1) ... /usr/bin/tl-paper: setting paper size for dvips to a4. /usr/bin/tl-paper: setting paper size for dvipdfmx to a4. /usr/bin/tl-paper: setting paper size for xdvi to a4. /usr/bin/tl-paper: setting paper size for pdftex to a4. Running mktexlsr. This may take some time... done. Building format(s) --all. This may take some time... done. Processing triggers for tex-common ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Setting up texlive-latex-base (2011.20120424-1) ... Running mktexlsr. This may take some time... done. Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-latex-base.cnf. This may take some time... done. Setting up texlive-pictures (2011.20120424-1) ... Setting up texlive-font-utils (2011.20120424-1) ... Setting up texlive-fonts-recommended (2011.20120424-1) ... Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Setting up texlive-math-extra (2011.20120424-1) ... Running mktexlsr. This may take some time... done. Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-math-extra.cnf. This may take some time... done. Setting up texlive-latex-recommended (2011.20120424-1) ... Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Setting up texlive-latex-extra (2011.20120424-1) ... Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Setting up libgs9 (9.05~dfsg-5) ... Setting up ghostscript (9.05~dfsg-5) ... Setting up gs-cjk-resource (1.20100103-3) ... Setting up qdbus (4:4.7.4-3+rpi2) ... Setting up libqt4-dbus (4:4.7.4-3+rpi2) ... Setting up libqt4-network (4:4.7.4-3+rpi2) ... Setting up gnuplot-x11 (4.6.0-5) ... Setting up gnuplot (4.6.0-5) ... Setting up sbuild-build-depends-rheolef-dummy (0.invalid.0) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build environment │ └──────────────────────────────────────────────────────────────────────────────┘ Kernel: Linux 3.2.0-2-mx5 armhf (armv7l) Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1.1+rpi2 gcc-4.6_4.6.3-1.1+rpi2 libc6-dev_2.13-30 libstdc++6_4.7.0-1.1+rpi libstdc++6-4.6-dev_4.6.3-1.1+rpi2 linux-libc-dev_3.2.12-1 Package versions: apt_0.8.15.10 autoconf_2.69-1 automake_1:1.11.5-1 autotools-dev_20120210.1 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bison_1:2.5.dfsg-2.1 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1.1+rpi2 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 ed_1.6-1 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 flex_2.5.35-10 fontconfig_2.9.0-3 fontconfig-config_2.9.0-3 g++_4:4.6.2-4 g++-4.6_4.6.3-1.1+rpi2 gawk_1:4.0.1+dfsg-1 gcc_4:4.6.2-4 gcc-4.4-base_4.4.7-1.1+rpi1 gcc-4.5-base_4.5.3-12+rpi1 gcc-4.6_4.6.3-1.1+rpi2 gcc-4.6-base_4.6.3-1.1+rpi2 gcc-4.7-base_4.7.0-1.1+rpi gettext_0.18.1.1-5+rpi1 gettext-base_0.18.1.1-5+rpi1 ghostscript_9.05~dfsg-5 ginac-tools_1.6.2-1 gnupg_1.4.12-4 gnuplot_4.6.0-5 gnuplot-nox_4.6.0-5 gnuplot-x11_4.6.0-5 gpgv_1.4.12-4 graphviz_2.26.3-10+rpi1 grep_2.11-3 groff-base_1.21-7 gs-cjk-resource_1.20100103-3 gsfonts_1:8.11+urwcyr1.0.7~pre44-4.2 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 imagemagick_8:6.7.4.0-5 imagemagick-common_8:6.7.4.0-5 initscripts_2.88dsf-22.1 insserv_1.14.0-3 install-info_4.13a.dfsg.1-10 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libamd2.2.0_1:3.4.0-2 libatk1.0-0_2.4.0-2 libatk1.0-data_2.4.0-2 libattr1_1:2.4.46-5 libaudio2_1.9.3-5 libavahi-client3_0.6.31-1 libavahi-common-data_0.6.31-1 libavahi-common3_0.6.31-1 libbison-dev_1:2.5.dfsg-2.1 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libboost-dev_1.49.0.1 libboost-iostreams-dev_1.49.0.1 libboost-iostreams1.49-dev_1.49.0-2 libboost-iostreams1.49.0_1.49.0-2 libboost-regex1.49-dev_1.49.0-2 libboost-regex1.49.0_1.49.0-2 libboost-serialization-dev_1.49.0.1 libboost-serialization1.49-dev_1.49.0-2 libboost-serialization1.49.0_1.49.0-2 libboost1.49-dev_1.49.0-2 libbsd0_0.3.0-2 libbtf1.1.0_1:3.4.0-2 libbz2-1.0_1.0.6-1 libc-bin_2.13-30 libc-dev-bin_2.13-30 libc6_2.13-30 libc6-dev_2.13-30 libcairo2_1.12.2-1 libcamd2.2.0_1:3.4.0-2 libccolamd2.7.1_1:3.4.0-2 libcdt4_2.26.3-10+rpi1 libcgraph5_2.26.3-10+rpi1 libcholmod1.7.1_1:3.4.0-2 libclass-isa-perl_0.36-3 libcln-dev_1.3.2-1.2 libcln6_1.3.2-1.2 libcolamd2.7.1_1:3.4.0-2 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libcsparse2.2.3_1:3.4.0-2 libcups2_1.5.2-5 libcupsimage2_1.5.2-5 libcxsparse2.2.3_1:3.4.0-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdbus-1-3_1.5.12-1 libdpkg-perl_1.16.2 libdrm2_2.4.33-1 libedit2_2.11-20080614-3 libexpat1_2.1.0-1 libffi5_3.0.10-3+b3 libfile-fcntllock-perl_0.14-1 libfontconfig1_2.9.0-3 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-1.1+rpi libgcrypt11_1.5.0-3 libgd2-noxpm_2.0.36~rc1~dfsg-6 libgdbm3_1.8.3-10 libgdk-pixbuf2.0-0_2.26.1-1 libgdk-pixbuf2.0-common_2.26.1-1 libgfortran3_4.7.0-1.1+rpi libginac-dev_1.6.2-1 libginac2_1.6.2-1 libgl1-mesa-glx_7.11.2-1 libglapi-mesa_7.11.2-1 libglib2.0-0_2.32.2-1 libglu1-mesa_7.11.2-1 libgmp-dev_2:5.0.4+dfsg-1 libgmp10_2:5.0.4+dfsg-1 libgmpxx4ldbl_2:5.0.4+dfsg-1 libgnutls26_2.12.18-1 libgomp1_4.7.0-1.1+rpi libgpg-error0_1.10-3 libgraph4_2.26.3-10+rpi1 libgraphite3_1:2.3.1-0.2 libgs9_9.05~dfsg-5 libgs9-common_9.05~dfsg-5 libgssapi-krb5-2_1.10+dfsg~beta1-2 libgtk2.0-0_2.24.10-1 libgtk2.0-common_2.24.10-1 libgvc5_2.26.3-10+rpi1 libgvpr1_2.26.3-10+rpi1 libice6_2:1.0.8-2 libicu-dev_4.8.1.1-6 libicu48_4.8.1.1-6 libidn11_1.24-2 libijs-0.35_0.35-8 libjasper1_1.900.1-13 libjbig0_2.0-2 libjbig2dec0_0.11+20120125-1 libjpeg8_8d-1 libk5crypto3_1.10+dfsg~beta1-2 libkeyutils1_1.5.2-2 libklu1.1.0_1:3.4.0-2 libkpathsea6_2011.20120410-1 libkrb5-3_1.10+dfsg~beta1-2 libkrb5support0_1.10+dfsg~beta1-2 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblcms1_1.19.dfsg-1 liblcms2-2_2.2+git20110628-2.1 libldl2.0.1_1:3.4.0-2 liblocale-gettext-perl_1.05-7 liblqr-1-0_0.4.1-1.1 libltdl-dev_2.4.2-1+b2 libltdl7_2.4.2-1+b2 liblua5.1-0_5.1.5-1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmagickcore5_8:6.7.4.0-5 libmagickwand5_8:6.7.4.0-5 libmng1_1.0.10-3 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-7 libncursesw5_5.9-7 libopenjpeg2_1.3+dfsg-4 libp11-kit0_0.12-3 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpathplan4_2.26.3-10+rpi1 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.49-1 libpoppler13_0.16.7-3 libptexenc1_2011.20120410-1 libqt4-dbus_4:4.7.4-3+rpi2 libqt4-network_4:4.7.4-3+rpi2 libqt4-svg_4:4.7.4-3+rpi2 libqt4-xml_4:4.7.4-3+rpi2 libqtcore4_4:4.7.4-3+rpi2 libqtgui4_4:4.7.4-3+rpi2 libreadline6_6.2-8 libselinux1_2.1.9-2 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-1 libsigsegv2_2.9-4 libslang2_2.2.4-10 libsm6_2:1.2.1-2 libss2_1.42.2-2 libstdc++6_4.7.0-1.1+rpi libstdc++6-4.6-dev_4.6.3-1.1+rpi2 libsuitesparse-dev_1:3.4.0-2 libswitch-perl_2.16-2 libtasn1-3_2.12-1 libtext-charwidth-perl_0.04-7 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-5 libtimedate-perl_1.2000-1 libtinfo5_5.9-7 libtool_2.4.2-1+b2 libumfpack5.4.0_1:3.4.0-2 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libwxbase2.8-0_2.8.12.1-9 libwxgtk2.8-0_2.8.12.1-9 libx11-6_2:1.4.99.901-2 libx11-data_2:1.4.99.901-2 libxau6_1:1.0.7-1 libxaw7_2:1.0.10-2 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxcomposite1_1:0.4.3-2 libxcursor1_1:1.1.13-1 libxdamage1_1:1.1.3-2 libxdmcp6_1:1.1.1-1 libxdot4_2.26.3-10+rpi1 libxext6_2:1.3.1-2 libxfixes3_1:5.0-4 libxft2_2.2.0-3 libxi6_2:1.6.0-1 libxinerama1_2:1.1.2-1 libxml2_2.7.8.dfsg-9 libxmu6_2:1.1.1-1 libxpm4_1:3.5.10-1 libxrandr2_2:1.3.2-2 libxrender1_1:0.9.7-1 libxt6_1:1.1.3-1 libxxf86vm1_1:1.1.2-1 linux-libc-dev_3.2.12-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 luatex_0.70.1-3 m4_1.4.16-2 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-17 mime-support_3.52-1 mount_2.20.1-4 multiarch-support_2.13-30 ncurses-base_5.9-6 ncurses-bin_5.9-7 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 preview-latex-style_11.86-10 qdbus_4:4.7.4-3+rpi2 readline-common_6.2-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-rheolef-dummy_0.invalid.0 sed_4.2.1-9 sensible-utils_0.0.6 shared-mime-info_0.90-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tex-common_3.10 texi2html_1.82-1 texinfo_4.13a.dfsg.1-10 texlive-base_2011.20120424-1 texlive-binaries_2011.20120410-1 texlive-common_2011.20120424-1 texlive-doc-base_2011.20120424-1 texlive-font-utils_2011.20120424-1 texlive-fonts-recommended_2011.20120424-1 texlive-latex-base_2011.20120424-1 texlive-latex-extra_2011.20120424-1 texlive-latex-recommended_2011.20120424-1 texlive-math-extra_2011.20120424-1 texlive-pictures_2011.20120424-1 transfig_1:3.2.5.d-3 ttf-dejavu-core_2.33-2 ttf-marvosym_0.1+dfsg-2 tzdata_2012c-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 x11-common_1:7.6+13 xaw3dg_1.5+E-18.1 xfig_1:3.2.5.b-2 xutils-dev_1:7.7~1 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-1 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build │ └──────────────────────────────────────────────────────────────────────────────┘ Unpack source ───────────── gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error gpgv: Signature made Thu Mar 31 09:14:37 2011 UTC using DSA key ID DD899610 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./rheolef_5.93-2.dsc dpkg-source: info: extracting rheolef in rheolef-5.93 dpkg-source: info: unpacking rheolef_5.93.orig.tar.gz dpkg-source: info: unpacking rheolef_5.93-2.debian.tar.gz Check disc space ──────────────── Sufficient free space for build User Environment ──────────────── HOME=/sbuild-nonexistent LOGNAME=buildd PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/X11R6/bin:/usr/games SCHROOT_CHROOT_NAME=testing-armhf-sbuild SCHROOT_COMMAND=env SCHROOT_GID=108 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=testing-armhf-sbuild-8ce011a5-1175-4dcf-ae90-fb278d2e7a3f SCHROOT_UID=106 SCHROOT_USER=buildd SHELL=/bin/sh TERM=xterm USER=buildd dpkg-buildpackage ───────────────── dpkg-buildpackage: source package rheolef dpkg-buildpackage: source version 5.93-2 dpkg-source --before-build rheolef-5.93 dpkg-buildpackage: host architecture armhf fakeroot debian/rules clean dh_testdir dh_testroot rm -f build-stamp configure-stamp dh_clean # Removing installation directories rm -Rf debian/tmp-rheolef # Removing and/or reinitialising files generated after templates # rm -f debian/shlibs.local dpkg-buildpackage: warning: debian/rules must be updated to support the 'build-arch' and 'build-indep' targets (at least 'build-arch' seems to be missing) debian/rules build # Prepare the debian control files necessary for the creation of the packages cat debian/shlibs.librheolefX.X | \ sed -e "s/\@LIBRHEOLEF\@/librheolef1/g" \ -e "s/\@MAJOR_VERSION\@/5/g" \ -e "s/\@MINOR_VERSION\@/93/g" \ -e "s/\@VERSION\@/5.93/g" \ -e "s/\@SONAME\@/5/g" > debian/shlibs.librheolef1 cat debian/librheolefX.X.overrides | \ sed -e "s/\@LIBRHEOLEF\@/librheolef1/g" \ -e "s/\@MAJOR_VERSION\@/5/g" \ -e "s/\@MINOR_VERSION\@/93/g" \ -e "s/\@VERSION\@/5.93/g" \ -e "s/\@SONAME\@/5/g" > debian/librheolef1.lintian-overrides cat debian/librheolefX.X.install | \ sed -e "s/\@VERSION\@/5.93/g" > debian/librheolef1.install cp -f debian/librheolefX.X.substvars debian/librheolef1.substvars dh_testdir ./bootstrap + AM_SUFFIX= + AM_OPTS=--gnu + AM_ADD=--add-missing --copy --force-missing + AUTOMAKE=automake --gnu + ACLOCAL=aclocal + set -x + rm -rf autom4te.cache + rm -f config/config.guess config/config.sub + rm -f config/config.h config/acconfig.h config/acconfig.h.in + rm -f aclocal.m4 config/aclocal.m4 + rm -f libtool config/libtool.m4 config/ltmain.sh config/ltversion.m4 config/ltsugar.m4 config/lt~obsolete.m4 config/ltoptions.m4 + rm -f config/texinfo.tex + rm -f config/install-sh config/missing config/mkinstalldirs config/depcomp + test -f INSTALL + export SED=sed + export EGREP=grep -E + libtoolize --force --copy libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, `config'. libtoolize: copying file `config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIR, `config'. libtoolize: copying file `config/libtool.m4' libtoolize: copying file `config/ltoptions.m4' libtoolize: copying file `config/ltsugar.m4' libtoolize: copying file `config/ltversion.m4' libtoolize: copying file `config/lt~obsolete.m4' + aclocal -I config + autoheader -B config + autoconf -B config + + sed -egrep s%\.am$%% -e s%\./%% -v libltdl + find . -name Makefile.am + automake --gnu --add-missing --copy --force-missing Makefile doc/Makefile doc/pexamples/Makefile doc/doxygen/Makefile doc/refman/Makefile doc/usrman/Makefile util/dmallocxx/Makefile util/tst/Makefile util/Makefile util/lib/Makefile util/bamg/Makefile util/doubledouble/Makefile util/bigfloat/Makefile util/fdstream/Makefile util/ublas/Makefile nfem/form_element/Makefile nfem/basis/Makefile nfem/tst/Makefile nfem/Makefile nfem/ptst/Makefile nfem/lib/Makefile nfem/quadrature/Makefile nfem/bin/Makefile nfem/vtk/Makefile nfem/data/Makefile nfem/plib/Makefile nfem/pform_element/Makefile config/Makefile skit/tst/Makefile skit/Makefile skit/lib/Makefile skit/plib2/Makefile skit/ptst2/Makefile configure.ac:555: installing `config/config.guess' configure.ac:555: installing `config/config.sub' configure.ac:499: installing `config/install-sh' configure.ac:499: installing `config/missing' doc/pexamples/Makefile.am: installing `config/depcomp' doc/refman/Makefile.am:40: installing `config/texinfo.tex' + exit_status=0 + set +x CC=gcc CXX=g++ ./configure --enable-fast-install --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --disable-optim --with-umfpack configuring rheolef 5.93... checking for aclocal... aclocal checking for autoheader... autoheader checking for autoconf... autoconf checking for automake... automake checking for tar... tar checking for makeinfo... makeinfo checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking build system type... armv7l-unknown-linux-gnueabihf checking host system type... armv7l-unknown-linux-gnueabihf checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 805306365 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert armv7l-unknown-linux-gnueabihf file names to armv7l-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert armv7l-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for c++ ieee flag... checking how to run the C preprocessor... gcc -E checking for make... make checking whether make is GNU make... yes checking for col... col checking for tex... tex checking for latex... latex checking for pdflatex... pdflatex checking for hyperref LaTeX package... yes checking for bibtex... bibtex checking for makeindex... makeindex checking for fig2dev... fig2dev checking for gnuplot... gnuplot checking for lgrind... no checking for texi2dvi... texi2dvi checking for texi2pdf... texi2pdf checking for dvips... dvips checking for ps2pdf... ps2pdf checking for texi2html... texi2html checking for gnuplot... (cached) gnuplot checking for doxygen... no checking for dot... dot checking for convert... convert checking for plotmtv... no checking for gzip... gzip checking for bzip2... bzip2 checking for flex... /usr/bin/flex checking for FlexLexer.h... /usr/include/FlexLexer.h checking for bison... bison checking for m4... m4 checking for gperf... no checking climits usability... yes checking climits presence... yes checking for climits... yes checking cmath usability... yes checking cmath presence... yes checking for cmath... yes checking cstdio usability... yes checking cstdio presence... yes checking for cstdio... yes checking cstdlib usability... yes checking cstdlib presence... yes checking for cstdlib... yes checking cctype usability... yes checking cctype presence... yes checking for cctype... yes checking cassert usability... yes checking cassert presence... yes checking for cassert... yes checking cfloat usability... yes checking cfloat presence... yes checking for cfloat... yes checking cstring usability... yes checking cstring presence... yes checking for cstring... yes checking cstdarg usability... yes checking cstdarg presence... yes checking for cstdarg... yes checking ctime usability... yes checking ctime presence... yes checking for ctime... yes checking limits usability... yes checking limits presence... yes checking for limits... yes checking iostream usability... yes checking iostream presence... yes checking for iostream... yes checking iomanip usability... yes checking iomanip presence... yes checking for iomanip... yes checking ios usability... yes checking ios presence... yes checking for ios... yes checking string usability... yes checking string presence... yes checking for string... yes checking sstream usability... yes checking sstream presence... yes checking for sstream... yes checking iterator usability... yes checking iterator presence... yes checking for iterator... yes checking functional usability... yes checking functional presence... yes checking for functional... yes checking numeric usability... yes checking numeric presence... yes checking for numeric... yes checking algorithm usability... yes checking algorithm presence... yes checking for algorithm... yes checking memory usability... yes checking memory presence... yes checking for memory... yes checking istream usability... yes checking istream presence... yes checking for istream... yes checking ostream usability... yes checking ostream presence... yes checking for ostream... yes checking fstream usability... yes checking fstream presence... yes checking for fstream... yes checking vector usability... yes checking vector presence... yes checking for vector... yes checking list usability... yes checking list presence... yes checking for list... yes checking set usability... yes checking set presence... yes checking for set... yes checking map usability... yes checking map presence... yes checking for map... yes checking utility usability... yes checking utility presence... yes checking for utility... yes checking symlink.h usability... no checking symlink.h presence... no checking for symlink.h... no checking for unistd.h... (cached) yes checking for iostream::rdbuf(void*)... no checking for ios::bp... no checking for ios::setstate(long)... no checking for ios::bitalloc()... no checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking for gettimeofday(timeval*, timezone*)... yes checking for isinf(double)... yes checking for finite(double)... no checking for abs(double)... no checking for sqr(double)... no checking for pkg-config... no checking for ginac-config... no checking for GiNaC... no checking for long long int... yes checking for unsigned long long int... yes checking boost/numeric/ublas/matrix.hpp usability... yes checking boost/numeric/ublas/matrix.hpp presence... yes checking for boost/numeric/ublas/matrix.hpp... yes checking for boost/numeric/ublas/matrix.hpp usability...... yes checking for libumfpack... -lumfpack -lamd -lblas checking for umfpack.h... /usr/include/suitesparse/umfpack.h checking whether to generate debugging information... no OPTIM: enable_debug=no OPTIM: enable_optim=no OPTIM: enable_generic= configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/config.mk config.status: creating config/rheolef-config config.status: creating util/Makefile config.status: creating util/dmallocxx/Makefile config.status: creating util/doubledouble/Makefile config.status: creating util/bigfloat/Makefile config.status: creating util/fdstream/Makefile config.status: creating util/ublas/Makefile config.status: creating util/bamg/Makefile config.status: creating util/lib/Makefile config.status: creating util/tst/Makefile config.status: creating skit/Makefile config.status: creating skit/lib/Makefile config.status: creating skit/tst/Makefile config.status: creating skit/plib2/Makefile config.status: creating skit/ptst2/Makefile config.status: creating nfem/Makefile config.status: creating nfem/data/Makefile config.status: creating nfem/quadrature/Makefile config.status: creating nfem/basis/Makefile config.status: creating nfem/form_element/Makefile config.status: creating nfem/pform_element/Makefile config.status: creating nfem/lib/Makefile config.status: creating nfem/bin/Makefile config.status: creating nfem/vtk/Makefile config.status: creating nfem/tst/Makefile config.status: creating nfem/plib/Makefile config.status: creating nfem/ptst/Makefile config.status: creating doc/Makefile config.status: creating doc/refman/Makefile config.status: creating doc/pexamples/Makefile config.status: creating doc/usrman/Makefile config.status: creating doc/doxygen/Makefile config.status: creating config/acconfig.h config.status: executing depfiles commands config.status: executing libtool commands checking for shlibpath variable name... LD_LIBRARY_PATH checking for hardcode libdir flag spec... -Wl,-rpath -Wl,${exec_prefix}/lib configure: creating config.h -------------------------------------- summary: prefix : /usr boost : yes ginac : no solver : umfpack -------------------------------------- touch configure-stamp dh_testdir # Compile the package. /usr/bin/make make[1]: Entering directory `/«PKGBUILDDIR»' Making all in config make all-am g++ -DHAVE_CONFIG_H -I. -ansi -Wall -Wno-unused -Werror -MT doc2man.o -MD -MP -MF .deps/doc2man.Tpo -c -o doc2man.o doc2man.cc mv -f .deps/doc2man.Tpo .deps/doc2man.Po /bin/bash ../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o doc2man doc2man.o libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o doc2man doc2man.o g++ -DHAVE_CONFIG_H -I. -ansi -Wall -Wno-unused -Werror -MT doc2texi.o -MD -MP -MF .deps/doc2texi.Tpo -c -o doc2texi.o doc2texi.cc mv -f .deps/doc2texi.Tpo .deps/doc2texi.Po /bin/bash ../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o doc2texi doc2texi.o libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o doc2texi doc2texi.o g++ -DHAVE_CONFIG_H -I. -ansi -Wall -Wno-unused -Werror -MT doc2oxy.o -MD -MP -MF .deps/doc2oxy.Tpo -c -o doc2oxy.o doc2oxy.cc mv -f .deps/doc2oxy.Tpo .deps/doc2oxy.Po /bin/bash ../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o doc2oxy doc2oxy.o libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o doc2oxy doc2oxy.o grep -e '^#' < rheolef-config | sed -e 's/^#//' | col -b -x | ../config/doc2man -package rheolef -version 5.93 -name rheolef-config -section 1rheolef > rheolef-config.1rheolef grep '^dnl[ ][ ]*#' acinclude.m4 | \ sed -e 's/^dnl[ ][ ]*//' -e 's/^#//' | \ col -b -x | ../config/doc2man -package rheolef -version 5.93 -name acinclude -section 9rheolef > acinclude.9rheolef cd .. \ && CONFIG_FILES=config/rheolef.mk CONFIG_HEADERS= /bin/bash ./config.status config.status: creating config/rheolef.mk config.status: executing depfiles commands config.status: executing libtool commands sed -e 's/^prefix/rheolef_prefix/' \ -e 's/^exec_prefix/rheolef_exec_prefix/' \ -e 's/{prefix}/{rheolef_prefix}/g' \ -e 's/{exec_prefix}/{rheolef_exec_prefix}/g' \ < rheolef.mk > rheolef.mk.new mv rheolef.mk.new rheolef.mk grep '^#' ./rheolef-config.in | sed -e 's/^#//' | \ col -b -x | ../config/doc2texi -file rheolef-config.in -node 'rheolef-config command,,, Commands' > rheolef-config.1texi grep '^dnl[ ][ ]*#' acinclude.m4 | \ sed -e 's/^dnl[ ][ ]*//' -e 's/^#//' | \ col -b -x | ../config/doc2texi -file config/acinclude.m4 -node "acinclude internal,,, Internals" > acinclude.9texi /bin/sh ../config/mk-symlink.sh .. .. . config.h rheolef.mk linking exported headers.... cd /«PKGBUILDDIR»/include/rheolef /bin/rm -f /«PKGBUILDDIR»/include/rheolef/config.h ln -s /«PKGBUILDDIR»/config/config.h config.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/rheolef.mk ln -s /«PKGBUILDDIR»/config/rheolef.mk rheolef.mk linking done. /bin/sh ../config/mk-symlink.sh .. .. . compiler.h dmalloc_return.h numeric_limits.h numeric_flags.h linking exported headers.... cd /«PKGBUILDDIR»/include/rheolef /bin/rm -f /«PKGBUILDDIR»/include/rheolef/compiler.h ln -s /«PKGBUILDDIR»/config/compiler.h compiler.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/dmalloc_return.h ln -s /«PKGBUILDDIR»/config/dmalloc_return.h dmalloc_return.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/numeric_limits.h ln -s /«PKGBUILDDIR»/config/numeric_limits.h numeric_limits.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/numeric_flags.h ln -s /«PKGBUILDDIR»/config/numeric_flags.h numeric_flags.h linking done. Making all in util Making all in bamg g++ -DHAVE_CONFIG_H -I. -I../../config -DBAMG_LONG_LONG -w -ansi -Wall -Wno-unused -Werror -MT bamg.o -MD -MP -MF .deps/bamg.Tpo -c -o bamg.o bamg.cpp mv -f .deps/bamg.Tpo .deps/bamg.Po g++ -DHAVE_CONFIG_H -I. -I../../config -DBAMG_LONG_LONG -w -ansi -Wall -Wno-unused -Werror -MT bamg-aux.o -MD -MP -MF .deps/bamg-aux.Tpo -c -o bamg-aux.o bamg-aux.cpp mv -f .deps/bamg-aux.Tpo .deps/bamg-aux.Po g++ -DHAVE_CONFIG_H -I. -I../../config -DBAMG_LONG_LONG -w -ansi -Wall -Wno-unused -Werror -MT Mesh2.o -MD -MP -MF .deps/Mesh2.Tpo -c -o Mesh2.o Mesh2.cpp mv -f .deps/Mesh2.Tpo .deps/Mesh2.Po g++ -DHAVE_CONFIG_H -I. -I../../config -DBAMG_LONG_LONG -w -ansi -Wall -Wno-unused -Werror -MT MeshRead.o -MD -MP -MF .deps/MeshRead.Tpo -c -o MeshRead.o MeshRead.cpp mv -f .deps/MeshRead.Tpo .deps/MeshRead.Po g++ -DHAVE_CONFIG_H -I. -I../../config -DBAMG_LONG_LONG -w -ansi -Wall -Wno-unused -Werror -MT MeshWrite.o -MD -MP -MF .deps/MeshWrite.Tpo -c -o MeshWrite.o MeshWrite.cpp mv -f .deps/MeshWrite.Tpo .deps/MeshWrite.Po g++ -DHAVE_CONFIG_H -I. -I../../config -DBAMG_LONG_LONG -w -ansi -Wall -Wno-unused -Werror -MT MeshGeom.o -MD -MP -MF .deps/MeshGeom.Tpo -c -o MeshGeom.o MeshGeom.cpp mv -f .deps/MeshGeom.Tpo .deps/MeshGeom.Po g++ -DHAVE_CONFIG_H -I. -I../../config -DBAMG_LONG_LONG -w -ansi -Wall -Wno-unused -Werror -MT MeshQuad.o -MD -MP -MF .deps/MeshQuad.Tpo -c -o MeshQuad.o MeshQuad.cpp mv -f .deps/MeshQuad.Tpo .deps/MeshQuad.Po g++ -DHAVE_CONFIG_H -I. -I../../config -DBAMG_LONG_LONG -w -ansi -Wall -Wno-unused -Werror -MT QuadTree.o -MD -MP -MF .deps/QuadTree.Tpo -c -o QuadTree.o QuadTree.cpp mv -f .deps/QuadTree.Tpo .deps/QuadTree.Po g++ -DHAVE_CONFIG_H -I. -I../../config -DBAMG_LONG_LONG -w -ansi -Wall -Wno-unused -Werror -MT Meshio.o -MD -MP -MF .deps/Meshio.Tpo -c -o Meshio.o Meshio.cpp mv -f .deps/Meshio.Tpo .deps/Meshio.Po g++ -DHAVE_CONFIG_H -I. -I../../config -DBAMG_LONG_LONG -w -ansi -Wall -Wno-unused -Werror -MT Metric.o -MD -MP -MF .deps/Metric.Tpo -c -o Metric.o Metric.cpp mv -f .deps/Metric.Tpo .deps/Metric.Po g++ -DHAVE_CONFIG_H -I. -I../../config -DBAMG_LONG_LONG -w -ansi -Wall -Wno-unused -Werror -MT SetOfE4.o -MD -MP -MF .deps/SetOfE4.Tpo -c -o SetOfE4.o SetOfE4.cpp mv -f .deps/SetOfE4.Tpo .deps/SetOfE4.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o bamg bamg.o bamg-aux.o Mesh2.o MeshRead.o MeshWrite.o MeshGeom.o MeshQuad.o QuadTree.o Meshio.o Metric.o SetOfE4.o libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o bamg bamg.o bamg-aux.o Mesh2.o MeshRead.o MeshWrite.o MeshGeom.o MeshQuad.o QuadTree.o Meshio.o Metric.o SetOfE4.o grep -e '^#' < bamg-man.txt | sed -e 's/^#//' | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name bamg -section 1rheolef > bamg.1rheolef grep -e '^#' < bamg-man.txt | sed -e 's/^#//' | col -b -x | ../../config/doc2texi -file util/bamg/bamg-man.txt -node "bamg command,,, Commands" > bamg.1texi Making all in fdstream /bin/sh ../../config/mk-symlink.sh ../.. ../.. . pstream.h fdstream.h linking exported headers.... cd /«PKGBUILDDIR»/include/rheolef /bin/rm -f /«PKGBUILDDIR»/include/rheolef/pstream.h ln -s /«PKGBUILDDIR»/util/fdstream/pstream.h pstream.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/fdstream.h ln -s /«PKGBUILDDIR»/util/fdstream/fdstream.h fdstream.h linking done. touch stamp-symlink.in make all-am make[4]: Nothing to be done for `all-am'. Making all in ublas linking exported headers.... cd /«PKGBUILDDIR»/include/rheolef /bin/rm -f /«PKGBUILDDIR»/include/rheolef/ublas-io.h ln -s /«PKGBUILDDIR»/util/ublas/ublas-io.h ublas-io.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/ublas-invert.h ln -s /«PKGBUILDDIR»/util/ublas/ublas-invert.h ublas-invert.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/ublas_invert_3x3.h ln -s /«PKGBUILDDIR»/util/ublas/ublas_invert_3x3.h ublas_invert_3x3.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/ublas_matrix_range.h ln -s /«PKGBUILDDIR»/util/ublas/ublas_matrix_range.h ublas_matrix_range.h linking done. make all-am make[4]: Nothing to be done for `all-am'. Making all in lib linking exported headers.... cd /«PKGBUILDDIR»/include/rheolef /bin/rm -f /«PKGBUILDDIR»/include/rheolef/smart_pointer.h ln -s /«PKGBUILDDIR»/util/lib/smart_pointer.h smart_pointer.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/occurence.h ln -s /«PKGBUILDDIR»/util/lib/occurence.h occurence.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/pretty_name.h ln -s /«PKGBUILDDIR»/util/lib/pretty_name.h pretty_name.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/promote.h ln -s /«PKGBUILDDIR»/util/lib/promote.h promote.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/heap_object.h ln -s /«PKGBUILDDIR»/util/lib/heap_object.h heap_object.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/heap_allocator.h ln -s /«PKGBUILDDIR»/util/lib/heap_allocator.h heap_allocator.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/stack_allocator.h ln -s /«PKGBUILDDIR»/util/lib/stack_allocator.h stack_allocator.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/Vector.h ln -s /«PKGBUILDDIR»/util/lib/Vector.h Vector.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/iorheo.h ln -s /«PKGBUILDDIR»/util/lib/iorheo.h iorheo.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/iorheo-members.h ln -s /«PKGBUILDDIR»/util/lib/iorheo-members.h iorheo-members.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/catchmark.h ln -s /«PKGBUILDDIR»/util/lib/catchmark.h catchmark.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/iorheobase.h ln -s /«PKGBUILDDIR»/util/lib/iorheobase.h iorheobase.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/rheostream.h ln -s /«PKGBUILDDIR»/util/lib/rheostream.h rheostream.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/misc_algo.h ln -s /«PKGBUILDDIR»/util/lib/misc_algo.h misc_algo.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/the_clock.h ln -s /«PKGBUILDDIR»/util/lib/the_clock.h the_clock.h linking done. make all-am /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT iorheo.lo -MD -MP -MF .deps/iorheo.Tpo -c -o iorheo.lo iorheo.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT iorheo.lo -MD -MP -MF .deps/iorheo.Tpo -c iorheo.cc -fPIC -DPIC -o .libs/iorheo.o mv -f .deps/iorheo.Tpo .deps/iorheo.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT rheostream.lo -MD -MP -MF .deps/rheostream.Tpo -c -o rheostream.lo rheostream.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT rheostream.lo -MD -MP -MF .deps/rheostream.Tpo -c rheostream.cc -fPIC -DPIC -o .libs/rheostream.o /tmp/ccoMxA63.s: Assembler messages: /tmp/ccoMxA63.s:1282: Warning: swp{b} use is deprecated for this architecture mv -f .deps/rheostream.Tpo .deps/rheostream.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT the_clock.lo -MD -MP -MF .deps/the_clock.Tpo -c -o the_clock.lo the_clock.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT the_clock.lo -MD -MP -MF .deps/the_clock.Tpo -c the_clock.cc -fPIC -DPIC -o .libs/the_clock.o mv -f .deps/the_clock.Tpo .deps/the_clock.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT pretty_name.lo -MD -MP -MF .deps/pretty_name.Tpo -c -o pretty_name.lo pretty_name.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT pretty_name.lo -MD -MP -MF .deps/pretty_name.Tpo -c pretty_name.cc -fPIC -DPIC -o .libs/pretty_name.o mv -f .deps/pretty_name.Tpo .deps/pretty_name.Plo /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o libutil.la iorheo.lo rheostream.lo the_clock.lo pretty_name.lo -lboost_iostreams libtool: link: ar cru .libs/libutil.a .libs/iorheo.o .libs/rheostream.o .libs/the_clock.o .libs/pretty_name.o libtool: link: ranlib .libs/libutil.a libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) cat smart_pointer.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name smart_pointer -section 9rheolef > smart_pointer.9rheolef cat heap_allocator.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name heap_allocator -section 9rheolef > heap_allocator.9rheolef cat stack_allocator.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name stack_allocator -section 9rheolef > stack_allocator.9rheolef cat pretty_name.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name pretty_name -section 9rheolef > pretty_name.9rheolef cat Vector.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name Vector -section 3rheolef > Vector.3rheolef cat iorheo.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name iorheo -section 3rheolef > iorheo.3rheolef col: Invalid or incomplete multibyte or wide character cat catchmark.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name catchmark -section 3rheolef > catchmark.3rheolef cat rheostream.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name rheostream -section 3rheolef > rheostream.3rheolef cat smart_pointer.h | col -b -x | ../../config/doc2texi -file util/lib/smart_pointer.h -node "smart_pointer internal,,, Internals" > smart_pointer.9texi cat heap_allocator.h | col -b -x | ../../config/doc2texi -file util/lib/heap_allocator.h -node "heap_allocator internal,,, Internals" > heap_allocator.9texi cat stack_allocator.h | col -b -x | ../../config/doc2texi -file util/lib/stack_allocator.h -node "stack_allocator internal,,, Internals" > stack_allocator.9texi cat pretty_name.h | col -b -x | ../../config/doc2texi -file util/lib/pretty_name.h -node "pretty_name internal,,, Internals" > pretty_name.9texi cat Vector.h | col -b -x | ../../config/doc2texi -file util/lib/Vector.h -node "Vector class,,, Classes" > Vector.3texi cat iorheo.h | col -b -x | ../../config/doc2texi -file util/lib/iorheo.h -node "iorheo class,,, Classes" > iorheo.3texi col: Invalid or incomplete multibyte or wide character cat catchmark.h | col -b -x | ../../config/doc2texi -file util/lib/catchmark.h -node "catchmark class,,, Classes" > catchmark.3texi cat rheostream.h | col -b -x | ../../config/doc2texi -file util/lib/rheostream.h -node "rheostream class,,, Classes" > rheostream.3texi Making all in tst make[3]: Nothing to be done for `all-am'. Making all in skit Making all in lib linking exported headers.... cd /«PKGBUILDDIR»/include/rheolef /bin/rm -f /«PKGBUILDDIR»/include/rheolef/skit.h ln -s /«PKGBUILDDIR»/skit/lib/skit.h skit.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/csr.h ln -s /«PKGBUILDDIR»/skit/lib/csr.h csr.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/csr_row.h ln -s /«PKGBUILDDIR»/skit/lib/csr_row.h csr_row.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/csrrep.h ln -s /«PKGBUILDDIR»/skit/lib/csrrep.h csrrep.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/avec.h ln -s /«PKGBUILDDIR»/skit/lib/avec.h avec.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/avecrep.h ln -s /«PKGBUILDDIR»/skit/lib/avecrep.h avecrep.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/vec.h ln -s /«PKGBUILDDIR»/skit/lib/vec.h vec.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/ssk.h ln -s /«PKGBUILDDIR»/skit/lib/ssk.h ssk.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/permutation.h ln -s /«PKGBUILDDIR»/skit/lib/permutation.h permutation.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/diag.h ln -s /«PKGBUILDDIR»/skit/lib/diag.h diag.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/eye.h ln -s /«PKGBUILDDIR»/skit/lib/eye.h eye.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/ic0.h ln -s /«PKGBUILDDIR»/skit/lib/ic0.h ic0.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/ic0-algo.h ln -s /«PKGBUILDDIR»/skit/lib/ic0-algo.h ic0-algo.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/array.h ln -s /«PKGBUILDDIR»/skit/lib/array.h array.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/dns.h ln -s /«PKGBUILDDIR»/skit/lib/dns.h dns.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/inhb.h ln -s /«PKGBUILDDIR»/skit/lib/inhb.h inhb.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/inhb-aux.h ln -s /«PKGBUILDDIR»/skit/lib/inhb-aux.h inhb-aux.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/color.h ln -s /«PKGBUILDDIR»/skit/lib/color.h color.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/outps.h ln -s /«PKGBUILDDIR»/skit/lib/outps.h outps.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/outhb.h ln -s /«PKGBUILDDIR»/skit/lib/outhb.h outhb.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/outmm.h ln -s /«PKGBUILDDIR»/skit/lib/outmm.h outmm.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/outml.h ln -s /«PKGBUILDDIR»/skit/lib/outml.h outml.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/out-sparse-matlab.h ln -s /«PKGBUILDDIR»/skit/lib/out-sparse-matlab.h out-sparse-matlab.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/asr.h ln -s /«PKGBUILDDIR»/skit/lib/asr.h asr.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/asrrep.h ln -s /«PKGBUILDDIR»/skit/lib/asrrep.h asrrep.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/iotrick.h ln -s /«PKGBUILDDIR»/skit/lib/iotrick.h iotrick.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/skitbase.h ln -s /«PKGBUILDDIR»/skit/lib/skitbase.h skitbase.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/macros.h ln -s /«PKGBUILDDIR»/skit/lib/macros.h macros.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/classes.h ln -s /«PKGBUILDDIR»/skit/lib/classes.h classes.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/blas1-dense-no-tmpl.h ln -s /«PKGBUILDDIR»/skit/lib/blas1-dense-no-tmpl.h blas1-dense-no-tmpl.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/blas1-sparse-no-tmpl.h ln -s /«PKGBUILDDIR»/skit/lib/blas1-sparse-no-tmpl.h blas1-sparse-no-tmpl.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/num-algorithm.h ln -s /«PKGBUILDDIR»/skit/lib/num-algorithm.h num-algorithm.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/csr-algorithm.h ln -s /«PKGBUILDDIR»/skit/lib/csr-algorithm.h csr-algorithm.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/csr-algo-amulx.h ln -s /«PKGBUILDDIR»/skit/lib/csr-algo-amulx.h csr-algo-amulx.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/csr-algo-cat.h ln -s /«PKGBUILDDIR»/skit/lib/csr-algo-cat.h csr-algo-cat.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/csr-algo-trans.h ln -s /«PKGBUILDDIR»/skit/lib/csr-algo-trans.h csr-algo-trans.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/csr-algo-amub.h ln -s /«PKGBUILDDIR»/skit/lib/csr-algo-amub.h csr-algo-amub.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/csr-algo-aplb.h ln -s /«PKGBUILDDIR»/skit/lib/csr-algo-aplb.h csr-algo-aplb.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/csr-algo-amuld.h ln -s /«PKGBUILDDIR»/skit/lib/csr-algo-amuld.h csr-algo-amuld.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/csr-algo-dmula.h ln -s /«PKGBUILDDIR»/skit/lib/csr-algo-dmula.h csr-algo-dmula.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/csr-algo-trans-mult.h ln -s /«PKGBUILDDIR»/skit/lib/csr-algo-trans-mult.h csr-algo-trans-mult.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/ssk-algorithm.h ln -s /«PKGBUILDDIR»/skit/lib/ssk-algorithm.h ssk-algorithm.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/blas-algorithm.h ln -s /«PKGBUILDDIR»/skit/lib/blas-algorithm.h blas-algorithm.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/blas1-dense.h ln -s /«PKGBUILDDIR»/skit/lib/blas1-dense.h blas1-dense.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/blas1-sparse.h ln -s /«PKGBUILDDIR»/skit/lib/blas1-sparse.h blas1-sparse.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/blas1-mixt.h ln -s /«PKGBUILDDIR»/skit/lib/blas1-mixt.h blas1-mixt.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/blas1-mixt-no-tmpl.h ln -s /«PKGBUILDDIR»/skit/lib/blas1-mixt-no-tmpl.h blas1-mixt-no-tmpl.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/blas2.h ln -s /«PKGBUILDDIR»/skit/lib/blas2.h blas2.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/blas3.h ln -s /«PKGBUILDDIR»/skit/lib/blas3.h blas3.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/blas3-no-tmpl.h ln -s /«PKGBUILDDIR»/skit/lib/blas3-no-tmpl.h blas3-no-tmpl.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/cg.h ln -s /«PKGBUILDDIR»/skit/lib/cg.h cg.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/bicg.h ln -s /«PKGBUILDDIR»/skit/lib/bicg.h bicg.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/bicgstab.h ln -s /«PKGBUILDDIR»/skit/lib/bicgstab.h bicgstab.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/cgs.h ln -s /«PKGBUILDDIR»/skit/lib/cgs.h cgs.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/cheby.h ln -s /«PKGBUILDDIR»/skit/lib/cheby.h cheby.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gmres.h ln -s /«PKGBUILDDIR»/skit/lib/gmres.h gmres.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/ir.h ln -s /«PKGBUILDDIR»/skit/lib/ir.h ir.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/qmr.h ln -s /«PKGBUILDDIR»/skit/lib/qmr.h qmr.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gen_solver.h ln -s /«PKGBUILDDIR»/skit/lib/gen_solver.h gen_solver.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/matrix_solver.h ln -s /«PKGBUILDDIR»/skit/lib/matrix_solver.h matrix_solver.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/uzawa_abtb.h ln -s /«PKGBUILDDIR»/skit/lib/uzawa_abtb.h uzawa_abtb.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/uzawa_abtbc.h ln -s /«PKGBUILDDIR»/skit/lib/uzawa_abtbc.h uzawa_abtbc.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/urm_abtbc.h ln -s /«PKGBUILDDIR»/skit/lib/urm_abtbc.h urm_abtbc.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/cg_abtbc.h ln -s /«PKGBUILDDIR»/skit/lib/cg_abtbc.h cg_abtbc.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/cgup_abtbc.h ln -s /«PKGBUILDDIR»/skit/lib/cgup_abtbc.h cgup_abtbc.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/puzawa.h ln -s /«PKGBUILDDIR»/skit/lib/puzawa.h puzawa.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/pcg.h ln -s /«PKGBUILDDIR»/skit/lib/pcg.h pcg.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/pminres.h ln -s /«PKGBUILDDIR»/skit/lib/pminres.h pminres.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/mixed_solver.h ln -s /«PKGBUILDDIR»/skit/lib/mixed_solver.h mixed_solver.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/genrcm.h ln -s /«PKGBUILDDIR»/skit/lib/genrcm.h genrcm.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/rcm.h ln -s /«PKGBUILDDIR»/skit/lib/rcm.h rcm.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/fnroot.h ln -s /«PKGBUILDDIR»/skit/lib/fnroot.h fnroot.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/degree.h ln -s /«PKGBUILDDIR»/skit/lib/degree.h degree.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/rootls.h ln -s /«PKGBUILDDIR»/skit/lib/rootls.h rootls.h linking done. make all-am /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT csr.lo -MD -MP -MF .deps/csr.Tpo -c -o csr.lo csr.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT csr.lo -MD -MP -MF .deps/csr.Tpo -c csr.cc -fPIC -DPIC -o .libs/csr.o mv -f .deps/csr.Tpo .deps/csr.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT csr-io.lo -MD -MP -MF .deps/csr-io.Tpo -c -o csr-io.lo csr-io.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT csr-io.lo -MD -MP -MF .deps/csr-io.Tpo -c csr-io.cc -fPIC -DPIC -o .libs/csr-io.o mv -f .deps/csr-io.Tpo .deps/csr-io.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT csr-inst-amulx.lo -MD -MP -MF .deps/csr-inst-amulx.Tpo -c -o csr-inst-amulx.lo csr-inst-amulx.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT csr-inst-amulx.lo -MD -MP -MF .deps/csr-inst-amulx.Tpo -c csr-inst-amulx.cc -fPIC -DPIC -o .libs/csr-inst-amulx.o mv -f .deps/csr-inst-amulx.Tpo .deps/csr-inst-amulx.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT avec.lo -MD -MP -MF .deps/avec.Tpo -c -o avec.lo avec.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT avec.lo -MD -MP -MF .deps/avec.Tpo -c avec.cc -fPIC -DPIC -o .libs/avec.o mv -f .deps/avec.Tpo .deps/avec.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT vec.lo -MD -MP -MF .deps/vec.Tpo -c -o vec.lo vec.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT vec.lo -MD -MP -MF .deps/vec.Tpo -c vec.cc -fPIC -DPIC -o .libs/vec.o mv -f .deps/vec.Tpo .deps/vec.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT ssk.lo -MD -MP -MF .deps/ssk.Tpo -c -o ssk.lo ssk.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT ssk.lo -MD -MP -MF .deps/ssk.Tpo -c ssk.cc -fPIC -DPIC -o .libs/ssk.o mv -f .deps/ssk.Tpo .deps/ssk.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT ssk-spooles.lo -MD -MP -MF .deps/ssk-spooles.Tpo -c -o ssk-spooles.lo ssk-spooles.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT ssk-spooles.lo -MD -MP -MF .deps/ssk-spooles.Tpo -c ssk-spooles.cc -fPIC -DPIC -o .libs/ssk-spooles.o mv -f .deps/ssk-spooles.Tpo .deps/ssk-spooles.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT ssk-taucs.lo -MD -MP -MF .deps/ssk-taucs.Tpo -c -o ssk-taucs.lo ssk-taucs.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT ssk-taucs.lo -MD -MP -MF .deps/ssk-taucs.Tpo -c ssk-taucs.cc -fPIC -DPIC -o .libs/ssk-taucs.o mv -f .deps/ssk-taucs.Tpo .deps/ssk-taucs.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT ssk-umfpack.lo -MD -MP -MF .deps/ssk-umfpack.Tpo -c -o ssk-umfpack.lo ssk-umfpack.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT ssk-umfpack.lo -MD -MP -MF .deps/ssk-umfpack.Tpo -c ssk-umfpack.cc -fPIC -DPIC -o .libs/ssk-umfpack.o mv -f .deps/ssk-umfpack.Tpo .deps/ssk-umfpack.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT permutation.lo -MD -MP -MF .deps/permutation.Tpo -c -o permutation.lo permutation.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT permutation.lo -MD -MP -MF .deps/permutation.Tpo -c permutation.cc -fPIC -DPIC -o .libs/permutation.o mv -f .deps/permutation.Tpo .deps/permutation.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT array.lo -MD -MP -MF .deps/array.Tpo -c -o array.lo array.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT array.lo -MD -MP -MF .deps/array.Tpo -c array.cc -fPIC -DPIC -o .libs/array.o mv -f .deps/array.Tpo .deps/array.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT dns.lo -MD -MP -MF .deps/dns.Tpo -c -o dns.lo dns.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT dns.lo -MD -MP -MF .deps/dns.Tpo -c dns.cc -fPIC -DPIC -o .libs/dns.o mv -f .deps/dns.Tpo .deps/dns.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT eye.lo -MD -MP -MF .deps/eye.Tpo -c -o eye.lo eye.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT eye.lo -MD -MP -MF .deps/eye.Tpo -c eye.cc -fPIC -DPIC -o .libs/eye.o mv -f .deps/eye.Tpo .deps/eye.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT color.lo -MD -MP -MF .deps/color.Tpo -c -o color.lo color.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT color.lo -MD -MP -MF .deps/color.Tpo -c color.cc -fPIC -DPIC -o .libs/color.o mv -f .deps/color.Tpo .deps/color.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT outps.lo -MD -MP -MF .deps/outps.Tpo -c -o outps.lo outps.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT outps.lo -MD -MP -MF .deps/outps.Tpo -c outps.cc -fPIC -DPIC -o .libs/outps.o mv -f .deps/outps.Tpo .deps/outps.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT outml.lo -MD -MP -MF .deps/outml.Tpo -c -o outml.lo outml.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT outml.lo -MD -MP -MF .deps/outml.Tpo -c outml.cc -fPIC -DPIC -o .libs/outml.o mv -f .deps/outml.Tpo .deps/outml.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT blas1-dense-no-tmpl.lo -MD -MP -MF .deps/blas1-dense-no-tmpl.Tpo -c -o blas1-dense-no-tmpl.lo blas1-dense-no-tmpl.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I/usr/include/suitesparse -ansi -Wall -Wno-unused -Werror -MT blas1-dense-no-tmpl.lo -MD -MP -MF .deps/blas1-dense-no-tmpl.Tpo -c blas1-dense-no-tmpl.cc -fPIC -DPIC -o .libs/blas1-dense-no-tmpl.o mv -f .deps/blas1-dense-no-tmpl.Tpo .deps/blas1-dense-no-tmpl.Plo /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o libskit.la csr.lo csr-io.lo csr-inst-amulx.lo avec.lo vec.lo ssk.lo ssk-spooles.lo ssk-taucs.lo ssk-umfpack.lo permutation.lo array.lo dns.lo eye.lo color.lo outps.lo outml.lo blas1-dense-no-tmpl.lo ../../util/lib/libutil.la libtool: link: (cd .libs/libskit.lax/libutil.a && ar x "/«PKGBUILDDIR»/skit/lib/../../util/lib/.libs/libutil.a") libtool: link: ar cru .libs/libskit.a .libs/csr.o .libs/csr-io.o .libs/csr-inst-amulx.o .libs/avec.o .libs/vec.o .libs/ssk.o .libs/ssk-spooles.o .libs/ssk-taucs.o .libs/ssk-umfpack.o .libs/permutation.o .libs/array.o .libs/dns.o .libs/eye.o .libs/color.o .libs/outps.o .libs/outml.o .libs/blas1-dense-no-tmpl.o .libs/libskit.lax/libutil.a/iorheo.o .libs/libskit.lax/libutil.a/pretty_name.o .libs/libskit.lax/libutil.a/rheostream.o .libs/libskit.lax/libutil.a/the_clock.o libtool: link: ranlib .libs/libskit.a libtool: link: rm -fr .libs/libskit.lax libtool: link: ( cd ".libs" && rm -f "libskit.la" && ln -s "../libskit.la" "libskit.la" ) cat vec.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name vec -section 3rheolef > vec.3rheolef cat csr.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name csr -section 3rheolef > csr.3rheolef cat ssk.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name ssk -section 3rheolef > ssk.3rheolef cat diag.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name diag -section 3rheolef > diag.3rheolef cat permutation.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name permutation -section 3rheolef > permutation.3rheolef cat pcg.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name pcg -section 5rheolef > pcg.5rheolef cat ic0.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name ic0 -section 3rheolef > ic0.3rheolef cat pminres.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name pminres -section 5rheolef > pminres.5rheolef cat puzawa.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name puzawa -section 5rheolef > puzawa.5rheolef cat mixed_solver.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name mixed_solver -section 5rheolef > mixed_solver.5rheolef cat bicgstab.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name bicgstab -section 5rheolef > bicgstab.5rheolef cat gmres.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name gmres -section 5rheolef > gmres.5rheolef cat qmr.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name qmr -section 5rheolef > qmr.5rheolef cat vec.h | col -b -x | ../../config/doc2texi -file skit/lib/vec.h -node "vec class,,, Classes" > vec.3texi cat csr.h | col -b -x | ../../config/doc2texi -file skit/lib/csr.h -node "csr class,,, Classes" > csr.3texi cat ssk.h | col -b -x | ../../config/doc2texi -file skit/lib/ssk.h -node "ssk class,,, Classes" > ssk.3texi cat diag.h | col -b -x | ../../config/doc2texi -file skit/lib/diag.h -node "diag class,,, Classes" > diag.3texi cat permutation.h | col -b -x | ../../config/doc2texi -file skit/lib/permutation.h -node "permutation class,,, Classes" > permutation.3texi cat pcg.h | col -b -x | ../../config/doc2texi -file skit/lib/pcg.h -node "pcg algorithm,,, Algorithms" > pcg.5texi cat ic0.h | col -b -x | ../../config/doc2texi -file skit/lib/ic0.h -node "ic0 class,,, Classes" > ic0.3texi cat pminres.h | col -b -x | ../../config/doc2texi -file skit/lib/pminres.h -node "pminres algorithm,,, Algorithms" > pminres.5texi cat puzawa.h | col -b -x | ../../config/doc2texi -file skit/lib/puzawa.h -node "puzawa algorithm,,, Algorithms" > puzawa.5texi cat mixed_solver.h | col -b -x | ../../config/doc2texi -file skit/lib/mixed_solver.h -node "mixed_solver algorithm,,, Algorithms" > mixed_solver.5texi cat bicgstab.h | col -b -x | ../../config/doc2texi -file skit/lib/bicgstab.h -node "bicgstab algorithm,,, Algorithms" > bicgstab.5texi cat gmres.h | col -b -x | ../../config/doc2texi -file skit/lib/gmres.h -node "gmres algorithm,,, Algorithms" > gmres.5texi cat qmr.h | col -b -x | ../../config/doc2texi -file skit/lib/qmr.h -node "qmr algorithm,,, Algorithms" > qmr.5texi Making all in tst g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT csr.o -MD -MP -MF .deps/csr.Tpo -c -o csr.o csr.cc mv -f .deps/csr.Tpo .deps/csr.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o csr csr.o ../lib/libskit.la ../../util/lib/libutil.la -lboost_iostreams -lumfpack -lamd -lblas libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o csr csr.o ../lib/.libs/libskit.a ../../util/lib/.libs/libutil.a -lboost_iostreams -lumfpack -lamd -lblas g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT makefish.o -MD -MP -MF .deps/makefish.Tpo -c -o makefish.o makefish.cc mv -f .deps/makefish.Tpo .deps/makefish.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o makefish makefish.o ../lib/libskit.la ../../util/lib/libutil.la -lboost_iostreams -lumfpack -lamd -lblas libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o makefish makefish.o ../lib/.libs/libskit.a ../../util/lib/.libs/libutil.a -lboost_iostreams -lumfpack -lamd -lblas g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT makefish3d.o -MD -MP -MF .deps/makefish3d.Tpo -c -o makefish3d.o makefish3d.cc mv -f .deps/makefish3d.Tpo .deps/makefish3d.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o makefish3d makefish3d.o ../lib/libskit.la ../../util/lib/libutil.la -lboost_iostreams -lumfpack -lamd -lblas libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o makefish3d makefish3d.o ../lib/.libs/libskit.a ../../util/lib/.libs/libutil.a -lboost_iostreams -lumfpack -lamd -lblas g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT lehmer.o -MD -MP -MF .deps/lehmer.Tpo -c -o lehmer.o lehmer.cc mv -f .deps/lehmer.Tpo .deps/lehmer.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o lehmer lehmer.o ../lib/libskit.la ../../util/lib/libutil.la -lboost_iostreams -lumfpack -lamd -lblas libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o lehmer lehmer.o ../lib/.libs/libskit.a ../../util/lib/.libs/libutil.a -lboost_iostreams -lumfpack -lamd -lblas g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT wathen.o -MD -MP -MF .deps/wathen.Tpo -c -o wathen.o wathen.cc mv -f .deps/wathen.Tpo .deps/wathen.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o wathen wathen.o ../lib/libskit.la ../../util/lib/libutil.la -lboost_iostreams -lumfpack -lamd -lblas libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o wathen wathen.o ../lib/.libs/libskit.a ../../util/lib/.libs/libutil.a -lboost_iostreams -lumfpack -lamd -lblas cat csr.cc | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name csr -section 1rheolef > csr.1rheolef cat csr.cc | col -b -x | ../../config/doc2texi -file skit/tst/csr.cc -node "csr command,,, Commands" > csr.1texi cat makefish.cc | col -b -x | ../../config/doc2texi -file skit/tst/makefish.cc -node "makefish command,,, Commands" > makefish.1texi cat makefish3d.cc | col -b -x | ../../config/doc2texi -file skit/tst/makefish3d.cc -node "makefish3d command,,, Commands" > makefish3d.1texi cat lehmer.cc | col -b -x | ../../config/doc2texi -file skit/tst/lehmer.cc -node "lehmer command,,, Commands" > lehmer.1texi cat wathen.cc | col -b -x | ../../config/doc2texi -file skit/tst/wathen.cc -node "wathen command,,, Commands" > wathen.1texi make[3]: Nothing to be done for `all-am'. Making all in nfem Making all in data make[3]: Nothing to be done for `all'. Making all in quadrature linking exported headers.... cd /«PKGBUILDDIR»/include/rheolef /bin/rm -f /«PKGBUILDDIR»/include/rheolef/sqr.icc ln -s /«PKGBUILDDIR»/nfem/quadrature/sqr.icc sqr.icc /bin/rm -f /«PKGBUILDDIR»/include/rheolef/jacobi.icc ln -s /«PKGBUILDDIR»/nfem/quadrature/jacobi.icc jacobi.icc /bin/rm -f /«PKGBUILDDIR»/include/rheolef/jacobi_roots.icc ln -s /«PKGBUILDDIR»/nfem/quadrature/jacobi_roots.icc jacobi_roots.icc /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gamma.icc ln -s /«PKGBUILDDIR»/nfem/quadrature/gamma.icc gamma.icc /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_jacobi.icc ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_jacobi.icc gauss_jacobi.icc /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_radau_jacobi.icc ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_radau_jacobi.icc gauss_radau_jacobi.icc /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_lobatto_jacobi.icc ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_lobatto_jacobi.icc gauss_lobatto_jacobi.icc /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_chebyschev.icc ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_chebyschev.icc gauss_chebyschev.icc /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_radau_chebyschev.icc ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_radau_chebyschev.icc gauss_radau_chebyschev.icc /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_lobatto_chebyschev.icc ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_lobatto_chebyschev.icc gauss_lobatto_chebyschev.icc /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_legendre_check.icc ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_legendre_check.icc gauss_legendre_check.icc /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_chebyschev_check.icc ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_chebyschev_check.icc gauss_chebyschev_check.icc /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_jacobi_check.icc ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_jacobi_check.icc gauss_jacobi_check.icc /bin/rm -f /«PKGBUILDDIR»/include/rheolef/sqr.h ln -s /«PKGBUILDDIR»/nfem/quadrature/sqr.h sqr.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/jacobi.h ln -s /«PKGBUILDDIR»/nfem/quadrature/jacobi.h jacobi.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/jacobi_roots.h ln -s /«PKGBUILDDIR»/nfem/quadrature/jacobi_roots.h jacobi_roots.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gamma.h ln -s /«PKGBUILDDIR»/nfem/quadrature/gamma.h gamma.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_jacobi.h ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_jacobi.h gauss_jacobi.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_radau_jacobi.h ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_radau_jacobi.h gauss_radau_jacobi.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_lobatto_jacobi.h ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_lobatto_jacobi.h gauss_lobatto_jacobi.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_chebyschev.h ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_chebyschev.h gauss_chebyschev.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_radau_chebyschev.h ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_radau_chebyschev.h gauss_radau_chebyschev.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_lobatto_chebyschev.h ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_lobatto_chebyschev.h gauss_lobatto_chebyschev.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_legendre_check.h ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_legendre_check.h gauss_legendre_check.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_chebyschev_check.h ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_chebyschev_check.h gauss_chebyschev_check.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/gauss_jacobi_check.h ln -s /«PKGBUILDDIR»/nfem/quadrature/gauss_jacobi_check.h gauss_jacobi_check.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/tqli.h ln -s /«PKGBUILDDIR»/nfem/quadrature/tqli.h tqli.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/pythag.h ln -s /«PKGBUILDDIR»/nfem/quadrature/pythag.h pythag.h linking done. make all-am make[4]: Nothing to be done for `all-am'. Making all in basis linking exported headers.... cd /«PKGBUILDDIR»/include/rheolef /bin/rm -f /«PKGBUILDDIR»/include/rheolef/point.h ln -s /«PKGBUILDDIR»/nfem/basis/point.h point.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/basic_point.h ln -s /«PKGBUILDDIR»/nfem/basis/basic_point.h basic_point.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/tensor.h ln -s /«PKGBUILDDIR»/nfem/basis/tensor.h tensor.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/tensor-eig3.h ln -s /«PKGBUILDDIR»/nfem/basis/tensor-eig3.h tensor-eig3.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/tensor-svd-algo.h ln -s /«PKGBUILDDIR»/nfem/basis/tensor-svd-algo.h tensor-svd-algo.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/reference_element.h ln -s /«PKGBUILDDIR»/nfem/basis/reference_element.h reference_element.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/geo_element.h ln -s /«PKGBUILDDIR»/nfem/basis/geo_element.h geo_element.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/geo_element_v1.h ln -s /«PKGBUILDDIR»/nfem/basis/geo_element_v1.h geo_element_v1.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/geo_element_v2.h ln -s /«PKGBUILDDIR»/nfem/basis/geo_element_v2.h geo_element_v2.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/tiny_element.h ln -s /«PKGBUILDDIR»/nfem/basis/tiny_element.h tiny_element.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/basis.h ln -s /«PKGBUILDDIR»/nfem/basis/basis.h basis.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/basis_rep.h ln -s /«PKGBUILDDIR»/nfem/basis/basis_rep.h basis_rep.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/basis_symbolic.h ln -s /«PKGBUILDDIR»/nfem/basis/basis_symbolic.h basis_symbolic.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/basis_symbolic_hermite.h ln -s /«PKGBUILDDIR»/nfem/basis/basis_symbolic_hermite.h basis_symbolic_hermite.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/basis_on_lattice.h ln -s /«PKGBUILDDIR»/nfem/basis/basis_on_lattice.h basis_on_lattice.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/numbering.h ln -s /«PKGBUILDDIR»/nfem/basis/numbering.h numbering.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/numbering_rep.h ln -s /«PKGBUILDDIR»/nfem/basis/numbering_rep.h numbering_rep.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/quadrature.h ln -s /«PKGBUILDDIR»/nfem/basis/quadrature.h quadrature.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/tiny_matvec.h ln -s /«PKGBUILDDIR»/nfem/basis/tiny_matvec.h tiny_matvec.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/tiny_lu.h ln -s /«PKGBUILDDIR»/nfem/basis/tiny_lu.h tiny_lu.h linking done. g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT cxx_reference_element.o -MD -MP -MF .deps/cxx_reference_element.Tpo -c -o cxx_reference_element.o cxx_reference_element.cc mv -f .deps/cxx_reference_element.Tpo .deps/cxx_reference_element.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o cxx_reference_element cxx_reference_element.o -lm libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o cxx_reference_element cxx_reference_element.o -lm ./cxx_reference_element > ./reference_element_declare.cc.new ! file "reference_element_declare.cc" created. sh make_basis_cxx.sh P0 P1 P2 bubble H3 ! file basis.cc unchanged. sh make_numbering_cxx.sh P0 P1 P2 P1d P2d bubble P1pw H3 ! file numbering.cc unchanged. make all-am /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT basic_point.lo -MD -MP -MF .deps/basic_point.Tpo -c -o basic_point.lo basic_point.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT basic_point.lo -MD -MP -MF .deps/basic_point.Tpo -c basic_point.cc -fPIC -DPIC -o .libs/basic_point.o mv -f .deps/basic_point.Tpo .deps/basic_point.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT tensor.lo -MD -MP -MF .deps/tensor.Tpo -c -o tensor.lo tensor.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT tensor.lo -MD -MP -MF .deps/tensor.Tpo -c tensor.cc -fPIC -DPIC -o .libs/tensor.o mv -f .deps/tensor.Tpo .deps/tensor.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT tensor-eig3.lo -MD -MP -MF .deps/tensor-eig3.Tpo -c -o tensor-eig3.lo tensor-eig3.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT tensor-eig3.lo -MD -MP -MF .deps/tensor-eig3.Tpo -c tensor-eig3.cc -fPIC -DPIC -o .libs/tensor-eig3.o mv -f .deps/tensor-eig3.Tpo .deps/tensor-eig3.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT reference_element.lo -MD -MP -MF .deps/reference_element.Tpo -c -o reference_element.lo reference_element.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT reference_element.lo -MD -MP -MF .deps/reference_element.Tpo -c reference_element.cc -fPIC -DPIC -o .libs/reference_element.o mv -f .deps/reference_element.Tpo .deps/reference_element.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT geo_element.lo -MD -MP -MF .deps/geo_element.Tpo -c -o geo_element.lo geo_element.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT geo_element.lo -MD -MP -MF .deps/geo_element.Tpo -c geo_element.cc -fPIC -DPIC -o .libs/geo_element.o mv -f .deps/geo_element.Tpo .deps/geo_element.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT tiny_element.lo -MD -MP -MF .deps/tiny_element.Tpo -c -o tiny_element.lo tiny_element.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT tiny_element.lo -MD -MP -MF .deps/tiny_element.Tpo -c tiny_element.cc -fPIC -DPIC -o .libs/tiny_element.o mv -f .deps/tiny_element.Tpo .deps/tiny_element.Plo sh make_basis_cxx.sh P0 P1 P2 bubble H3 ! file basis.cc unchanged. /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT basis.lo -MD -MP -MF .deps/basis.Tpo -c -o basis.lo basis.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT basis.lo -MD -MP -MF .deps/basis.Tpo -c basis.cc -fPIC -DPIC -o .libs/basis.o mv -f .deps/basis.Tpo .deps/basis.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT basis_on_lattice.lo -MD -MP -MF .deps/basis_on_lattice.Tpo -c -o basis_on_lattice.lo basis_on_lattice.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT basis_on_lattice.lo -MD -MP -MF .deps/basis_on_lattice.Tpo -c basis_on_lattice.cc -fPIC -DPIC -o .libs/basis_on_lattice.o mv -f .deps/basis_on_lattice.Tpo .deps/basis_on_lattice.Plo sh make_numbering_cxx.sh P0 P1 P2 P1d P2d bubble P1pw H3 ! file numbering.cc unchanged. /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT numbering.lo -MD -MP -MF .deps/numbering.Tpo -c -o numbering.lo numbering.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT numbering.lo -MD -MP -MF .deps/numbering.Tpo -c numbering.cc -fPIC -DPIC -o .libs/numbering.o mv -f .deps/numbering.Tpo .deps/numbering.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT quadrature.lo -MD -MP -MF .deps/quadrature.Tpo -c -o 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-Wno-unused -Werror -MT P1pw_numbering.lo -MD -MP -MF .deps/P1pw_numbering.Tpo -c -o P1pw_numbering.lo P1pw_numbering.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT P1pw_numbering.lo -MD -MP -MF .deps/P1pw_numbering.Tpo -c P1pw_numbering.cc -fPIC -DPIC -o .libs/P1pw_numbering.o mv -f .deps/P1pw_numbering.Tpo .deps/P1pw_numbering.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT H3_numbering.lo -MD -MP -MF .deps/H3_numbering.Tpo -c -o H3_numbering.lo H3_numbering.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT H3_numbering.lo -MD -MP -MF .deps/H3_numbering.Tpo -c H3_numbering.cc -fPIC -DPIC -o .libs/H3_numbering.o mv -f .deps/H3_numbering.Tpo .deps/H3_numbering.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT libpredicates_la-predicates.lo -MD -MP -MF .deps/libpredicates_la-predicates.Tpo -c -o libpredicates_la-predicates.lo `test -f 'predicates.cc' || echo './'`predicates.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT libpredicates_la-predicates.lo -MD -MP -MF .deps/libpredicates_la-predicates.Tpo -c predicates.cc -fPIC -DPIC -o .libs/libpredicates_la-predicates.o mv -f .deps/libpredicates_la-predicates.Tpo .deps/libpredicates_la-predicates.Plo /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o libpredicates.la libpredicates_la-predicates.lo libtool: link: ar cru .libs/libpredicates.a .libs/libpredicates_la-predicates.o libtool: link: ranlib .libs/libpredicates.a libtool: link: ( cd ".libs" && rm -f "libpredicates.la" && ln -s "../libpredicates.la" "libpredicates.la" ) /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o libbasis.la basic_point.lo tensor.lo tensor-eig3.lo reference_element.lo geo_element.lo tiny_element.lo basis.lo basis_on_lattice.lo numbering.lo quadrature.lo quadrature_p.lo quadrature_e.lo quadrature_t.lo quadrature_q.lo quadrature_Te.lo quadrature_Pr.lo quadrature_H.lo P0.lo P1.lo P2.lo bubble.lo H3.lo P0_numbering.lo P1_numbering.lo P2_numbering.lo P1d_numbering.lo P2d_numbering.lo bubble_numbering.lo P1pw_numbering.lo H3_numbering.lo libpredicates.la libtool: link: (cd .libs/libbasis.lax/libpredicates.a && ar x "/«PKGBUILDDIR»/nfem/basis/./.libs/libpredicates.a") libtool: link: ar cru .libs/libbasis.a .libs/basic_point.o .libs/tensor.o .libs/tensor-eig3.o .libs/reference_element.o .libs/geo_element.o .libs/tiny_element.o .libs/basis.o .libs/basis_on_lattice.o .libs/numbering.o .libs/quadrature.o .libs/quadrature_p.o .libs/quadrature_e.o .libs/quadrature_t.o .libs/quadrature_q.o .libs/quadrature_Te.o .libs/quadrature_Pr.o .libs/quadrature_H.o .libs/P0.o .libs/P1.o .libs/P2.o .libs/bubble.o .libs/H3.o .libs/P0_numbering.o .libs/P1_numbering.o .libs/P2_numbering.o .libs/P1d_numbering.o .libs/P2d_numbering.o .libs/bubble_numbering.o .libs/P1pw_numbering.o .libs/H3_numbering.o .libs/libbasis.lax/libpredicates.a/libpredicates_la-predicates.o libtool: link: ranlib .libs/libbasis.a libtool: link: rm -fr .libs/libbasis.lax libtool: link: ( cd ".libs" && rm -f "libbasis.la" && ln -s "../libbasis.la" "libbasis.la" ) cat basic_point.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name point -section 3rheolef > point.3rheolef cat tensor.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name tensor -section 3rheolef > tensor.3rheolef cat basis.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name basis -section 9rheolef > basis.9rheolef cat quadrature.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name quadrature -section 9rheolef > quadrature.9rheolef cat numbering.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name numbering -section 9rheolef > numbering.9rheolef cat reference_element.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name reference_element -section 9rheolef > reference_element.9rheolef cat geo_element_v1.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name geo_element -section 9rheolef > geo_element.9rheolef cat point.icc | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name point -section 9rheolef > point.9rheolef cat edge.icc | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name edge -section 9rheolef > edge.9rheolef cat triangle.icc | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name triangle -section 9rheolef > triangle.9rheolef cat quadrangle.icc | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name quadrangle -section 9rheolef > quadrangle.9rheolef cat tetra.icc | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name tetra -section 9rheolef > tetra.9rheolef cat prism.icc | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name prism -section 9rheolef > prism.9rheolef cat hexa.icc | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name hexa -section 9rheolef > hexa.9rheolef cat basic_point.h | col -b -x | ../../config/doc2texi -file nfem/basis/basic_point.h -node "point class,,, Classes" > point.3texi cat tensor.h | col -b -x | ../../config/doc2texi -file nfem/basis/tensor.h -node "tensor class,,, Classes" > tensor.3texi cat basis.h | col -b -x | ../../config/doc2texi -file nfem/basis/basis.h -node "basis internal,,, Internals" > basis.9texi cat quadrature.h | col -b -x | ../../config/doc2texi -file nfem/basis/quadrature.h -node "quadrature internal,,, Internals" > quadrature.9texi cat numbering.h | col -b -x | ../../config/doc2texi -file nfem/basis/numbering.h -node "numbering internal,,, Internals" > numbering.9texi cat reference_element.h | col -b -x | ../../config/doc2texi -file nfem/basis/reference_element.h -node "reference_element internal,,, Internals" > reference_element.9texi cat geo_element_v1.h | col -b -x | ../../config/doc2texi -file nfem/basis/geo_element_v1.h -node "geo_element internal,,, Internals" > geo_element.9texi cat point.icc | col -b -x | ../../config/doc2texi -file nfem/basis/point.icc -node "point internal,,, Internals" > point.9texi cat edge.icc | col -b -x | ../../config/doc2texi -file nfem/basis/edge.icc -node "edge internal,,, Internals" > edge.9texi cat triangle.icc | col -b -x | ../../config/doc2texi -file nfem/basis/triangle.icc -node "triangle internal,,, Internals" > triangle.9texi cat quadrangle.icc | col -b -x | ../../config/doc2texi -file nfem/basis/quadrangle.icc -node "quadrangle internal,,, Internals" > quadrangle.9texi cat tetra.icc | col -b -x | ../../config/doc2texi -file nfem/basis/tetra.icc -node "tetra internal,,, Internals" > tetra.9texi cat prism.icc | col -b -x | ../../config/doc2texi -file nfem/basis/prism.icc -node "prism internal,,, Internals" > prism.9texi cat hexa.icc | col -b -x | ../../config/doc2texi -file nfem/basis/hexa.icc -node "hexa internal,,, Internals" > hexa.9texi Making all in lib linking exported headers.... cd /«PKGBUILDDIR»/include/rheolef /bin/rm -f /«PKGBUILDDIR»/include/rheolef/rheolef.h ln -s /«PKGBUILDDIR»/nfem/lib/rheolef.h rheolef.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/rheobase.h ln -s /«PKGBUILDDIR»/nfem/lib/rheobase.h rheobase.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/iofem.h ln -s /«PKGBUILDDIR»/nfem/lib/iofem.h iofem.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/fem_helper.h ln -s /«PKGBUILDDIR»/nfem/lib/fem_helper.h fem_helper.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/field_element.h ln -s /«PKGBUILDDIR»/nfem/lib/field_element.h field_element.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/form_element.h ln -s /«PKGBUILDDIR»/nfem/lib/form_element.h form_element.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/form_element_rep.h ln -s /«PKGBUILDDIR»/nfem/lib/form_element_rep.h form_element_rep.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/cad.h ln -s /«PKGBUILDDIR»/nfem/lib/cad.h cad.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/cad_domain.h ln -s /«PKGBUILDDIR»/nfem/lib/cad_domain.h cad_domain.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/cad_element.h ln -s /«PKGBUILDDIR»/nfem/lib/cad_element.h cad_element.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/cad-bezier.h ln -s /«PKGBUILDDIR»/nfem/lib/cad-bezier.h cad-bezier.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/piola_v1.h ln -s /«PKGBUILDDIR»/nfem/lib/piola_v1.h piola_v1.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/piola_algo_v1.h ln -s /«PKGBUILDDIR»/nfem/lib/piola_algo_v1.h piola_algo_v1.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/geo_tree.h ln -s /«PKGBUILDDIR»/nfem/lib/geo_tree.h geo_tree.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/hazel.h ln -s /«PKGBUILDDIR»/nfem/lib/hazel.h hazel.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/hazel_1d.h ln -s /«PKGBUILDDIR»/nfem/lib/hazel_1d.h hazel_1d.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/geo.h ln -s /«PKGBUILDDIR»/nfem/lib/geo.h geo.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/georep.h ln -s /«PKGBUILDDIR»/nfem/lib/georep.h georep.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/geo-build.h ln -s /«PKGBUILDDIR»/nfem/lib/geo-build.h geo-build.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/geo-qmg.h ln -s /«PKGBUILDDIR»/nfem/lib/geo-qmg.h geo-qmg.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/geo-visu.h ln -s /«PKGBUILDDIR»/nfem/lib/geo-visu.h geo-visu.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/geo-visu-aux.h ln -s /«PKGBUILDDIR»/nfem/lib/geo-visu-aux.h geo-visu-aux.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/geo-connectivity.h ln -s /«PKGBUILDDIR»/nfem/lib/geo-connectivity.h geo-connectivity.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/geomap.h ln -s /«PKGBUILDDIR»/nfem/lib/geomap.h geomap.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/project.h ln -s /«PKGBUILDDIR»/nfem/lib/project.h project.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/characteristic.h ln -s /«PKGBUILDDIR»/nfem/lib/characteristic.h characteristic.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/riesz_representer.h ln -s /«PKGBUILDDIR»/nfem/lib/riesz_representer.h riesz_representer.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/exact_compose.h ln -s /«PKGBUILDDIR»/nfem/lib/exact_compose.h exact_compose.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/interface.h ln -s /«PKGBUILDDIR»/nfem/lib/interface.h interface.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/adapt_option.h ln -s /«PKGBUILDDIR»/nfem/lib/adapt_option.h adapt_option.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/domain.h ln -s /«PKGBUILDDIR»/nfem/lib/domain.h domain.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/meshpoint.h ln -s /«PKGBUILDDIR»/nfem/lib/meshpoint.h meshpoint.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/space.h ln -s /«PKGBUILDDIR»/nfem/lib/space.h space.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/spacerep.h ln -s /«PKGBUILDDIR»/nfem/lib/spacerep.h spacerep.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/field.h ln -s /«PKGBUILDDIR»/nfem/lib/field.h field.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/field-visu.h ln -s /«PKGBUILDDIR»/nfem/lib/field-visu.h field-visu.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/interpolate.h ln -s /«PKGBUILDDIR»/nfem/lib/interpolate.h interpolate.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/branch.h ln -s /«PKGBUILDDIR»/nfem/lib/branch.h branch.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/trace.h ln -s /«PKGBUILDDIR»/nfem/lib/trace.h trace.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/form.h ln -s /«PKGBUILDDIR»/nfem/lib/form.h form.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/form_diag.h ln -s /«PKGBUILDDIR»/nfem/lib/form_diag.h form_diag.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/form_assembly.h ln -s /«PKGBUILDDIR»/nfem/lib/form_assembly.h form_assembly.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/form_diag_assembly.h ln -s /«PKGBUILDDIR»/nfem/lib/form_diag_assembly.h form_diag_assembly.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/form_manip.h ln -s /«PKGBUILDDIR»/nfem/lib/form_manip.h form_manip.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/form_diag_manip.h ln -s /«PKGBUILDDIR»/nfem/lib/form_diag_manip.h form_diag_manip.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/compute-bbox.h ln -s /«PKGBUILDDIR»/nfem/lib/compute-bbox.h compute-bbox.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/newton.h ln -s /«PKGBUILDDIR»/nfem/lib/newton.h newton.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/newton-backtrack.h ln -s /«PKGBUILDDIR»/nfem/lib/newton-backtrack.h newton-backtrack.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/damped-newton.h ln -s /«PKGBUILDDIR»/nfem/lib/damped-newton.h damped-newton.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/damped-newton-generic.h ln -s /«PKGBUILDDIR»/nfem/lib/damped-newton-generic.h damped-newton-generic.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/field-local-norm.h ln -s /«PKGBUILDDIR»/nfem/lib/field-local-norm.h field-local-norm.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/error-estimator-zz.h ln -s /«PKGBUILDDIR»/nfem/lib/error-estimator-zz.h error-estimator-zz.h /bin/rm -f /«PKGBUILDDIR»/include/rheolef/adapt-zz.h ln -s /«PKGBUILDDIR»/nfem/lib/adapt-zz.h adapt-zz.h linking done. make all-am /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT iofem.lo -MD -MP -MF .deps/iofem.Tpo -c -o iofem.lo iofem.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT iofem.lo -MD -MP -MF .deps/iofem.Tpo -c iofem.cc -fPIC -DPIC -o .libs/iofem.o mv -f .deps/iofem.Tpo .deps/iofem.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT fem_helper.lo -MD -MP -MF .deps/fem_helper.Tpo -c -o fem_helper.lo fem_helper.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT fem_helper.lo -MD -MP -MF .deps/fem_helper.Tpo -c fem_helper.cc -fPIC -DPIC -o .libs/fem_helper.o mv -f .deps/fem_helper.Tpo .deps/fem_helper.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT piola_v1.lo -MD -MP -MF .deps/piola_v1.Tpo -c -o piola_v1.lo piola_v1.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT piola_v1.lo -MD -MP -MF .deps/piola_v1.Tpo -c piola_v1.cc -fPIC -DPIC -o .libs/piola_v1.o mv -f .deps/piola_v1.Tpo .deps/piola_v1.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT field_element.lo -MD -MP -MF .deps/field_element.Tpo -c -o field_element.lo field_element.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT field_element.lo -MD -MP -MF .deps/field_element.Tpo -c field_element.cc -fPIC -DPIC -o .libs/field_element.o mv -f .deps/field_element.Tpo .deps/field_element.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT form_element_rep.lo -MD -MP -MF .deps/form_element_rep.Tpo -c -o form_element_rep.lo form_element_rep.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT form_element_rep.lo -MD -MP -MF .deps/form_element_rep.Tpo -c form_element_rep.cc -fPIC -DPIC -o .libs/form_element_rep.o mv -f .deps/form_element_rep.Tpo .deps/form_element_rep.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT cad.lo -MD -MP -MF .deps/cad.Tpo -c -o cad.lo cad.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include 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field-visu-vector.lo branch.lo branch-vtk.lo branch-paraview.lo branch-gnuplot.lo form.lo form_diag.lo form_assembly.lo form_diag_assembly.lo form_manip.lo form_diag_manip.lo trace.lo field-local-norm.lo error-estimator-zz.lo adapt-zz.lo libtool: link: ar cru .libs/libfem.a .libs/iofem.o .libs/fem_helper.o .libs/piola_v1.o .libs/field_element.o .libs/form_element_rep.o .libs/cad.o .libs/cad_element.o .libs/cad-qmg-read.o .libs/cad-gnuplot.o .libs/cad-geomview.o .libs/domain.o .libs/geo.o .libs/geo-connectivity.o .libs/geo-interface.o .libs/geo-gnuplot.o .libs/geo-mtv.o .libs/geo-vtk.o .libs/geo-mayavi.o .libs/geo-visu.o .libs/geo-visu-aux.o .libs/geo-bamg.o .libs/geo-grummp.o .libs/geo-qmg.o .libs/geo-qmg-read.o .libs/geo-gmsh.o .libs/geo-mmg3d.o .libs/geo-tetgen.o .libs/geo-adapt.o .libs/geo-adapt-bamg.o .libs/geo-adapt-grummp.o .libs/geo-cemagref.o .libs/geomap.o .libs/characteristic.o .libs/geo_tree.o .libs/geo_tree_predicate.o .libs/hazel.o .libs/hazel_1d.o .libs/interface.o .libs/interpolate.o .libs/space.o .libs/field.o .libs/field-adapt.o .libs/field-bamg.o .libs/field-gmsh.o .libs/field-mmg3d.o .libs/field-cemagref.o .libs/field-visu.o .libs/field-mtv.o .libs/field-gnuplot.o .libs/field-vtk.o .libs/field-mayavi.o .libs/field-visu-vector.o .libs/branch.o .libs/branch-vtk.o .libs/branch-paraview.o .libs/branch-gnuplot.o .libs/form.o .libs/form_diag.o .libs/form_assembly.o .libs/form_diag_assembly.o .libs/form_manip.o .libs/form_diag_manip.o .libs/trace.o .libs/field-local-norm.o .libs/error-estimator-zz.o .libs/adapt-zz.o libtool: link: ranlib .libs/libfem.a libtool: link: ( cd ".libs" && rm -f "libfem.la" && ln -s "../libfem.la" "libfem.la" ) cat cad.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name cad -section 3rheolef > cad.3rheolef cat geo.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name geo -section 3rheolef > geo.3rheolef cat domain.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name domain -section 3rheolef > domain.3rheolef cat space.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name space -section 3rheolef > space.3rheolef cat field.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name field -section 3rheolef > field.3rheolef cat branch.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name branch -section 3rheolef > branch.3rheolef cat form.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name form -section 3rheolef > form.3rheolef cat form_diag.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name form_diag -section 3rheolef > form_diag.3rheolef cat trace.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name trace -section 3rheolef > trace.3rheolef cat form_manip.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name form_manip -section 3rheolef > form_manip.3rheolef cat form_diag_manip.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name form_diag_manip -section 3rheolef > form_diag_manip.3rheolef cat form_element.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name form_element -section 9rheolef > form_element.9rheolef cat geomap.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name geomap -section 9rheolef > geomap.9rheolef cat iofem.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name iofem -section 9rheolef > iofem.9rheolef cat riesz_representer.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name riesz_representer -section 5rheolef > riesz_representer.5rheolef cat characteristic.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name characteristic -section 9rheolef > characteristic.9rheolef cat newton.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name newton -section 5rheolef > newton.5rheolef cat damped-newton.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name damped-newton -section 5rheolef > damped-newton.5rheolef cat cad.h | col -b -x | ../../config/doc2texi -file nfem/lib/cad.h -node "cad class,,, Classes" > cad.3texi cat geo.h | col -b -x | ../../config/doc2texi -file nfem/lib/geo.h -node "geo class,,, Classes" > geo.3texi cat domain.h | col -b -x | ../../config/doc2texi -file nfem/lib/domain.h -node "domain class,,, Classes" > domain.3texi cat space.h | col -b -x | ../../config/doc2texi -file nfem/lib/space.h -node "space class,,, Classes" > space.3texi cat field.h | col -b -x | ../../config/doc2texi -file nfem/lib/field.h -node "field class,,, Classes" > field.3texi cat branch.h | col -b -x | ../../config/doc2texi -file nfem/lib/branch.h -node "branch class,,, Classes" > branch.3texi cat form.h | col -b -x | ../../config/doc2texi -file nfem/lib/form.h -node "form class,,, Classes" > form.3texi cat form_diag.h | col -b -x | ../../config/doc2texi -file nfem/lib/form_diag.h -node "form_diag class,,, Classes" > form_diag.3texi cat trace.h | col -b -x | ../../config/doc2texi -file nfem/lib/trace.h -node "trace class,,, Classes" > trace.3texi cat form_manip.h | col -b -x | ../../config/doc2texi -file nfem/lib/form_manip.h -node "form_manip class,,, Classes" > form_manip.3texi cat form_diag_manip.h | col -b -x | ../../config/doc2texi -file nfem/lib/form_diag_manip.h -node "form_diag_manip class,,, Classes" > form_diag_manip.3texi cat form_element.h | col -b -x | ../../config/doc2texi -file nfem/lib/form_element.h -node "form_element internal,,, Internals" > form_element.9texi cat geomap.h | col -b -x | ../../config/doc2texi -file nfem/lib/geomap.h -node "geomap internal,,, Internals" > geomap.9texi cat iofem.h | col -b -x | ../../config/doc2texi -file nfem/lib/iofem.h -node "iofem internal,,, Internals" > iofem.9texi cat riesz_representer.h | col -b -x | ../../config/doc2texi -file nfem/lib/riesz_representer.h -node "riesz_representer algorithm,,, Algorithms" > riesz_representer.5texi cat characteristic.h | col -b -x | ../../config/doc2texi -file nfem/lib/characteristic.h -node "characteristic internal,,, Internals" > characteristic.9texi cat newton.h | col -b -x | ../../config/doc2texi -file nfem/lib/newton.h -node "newton algorithm,,, Algorithms" > newton.5texi cat damped-newton.h | col -b -x | ../../config/doc2texi -file nfem/lib/damped-newton.h -node "damped-newton algorithm,,, Algorithms" > damped-newton.5texi Making all in form_element linking exported headers.... cd /«PKGBUILDDIR»/include/rheolef linking done. make all-am sh make_form_element_cxx.sh mass inv_mass grad_grad d_ds d2_ds2 grad curl div 2D 2W 2D_D div_div convect lumped_mass lumped_inv_mass d_dx0 d_dx1 d_dx2 d_ds_d_ds gradt_grad 2m_dualweight ! file form_element.cc unchanged. /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT form_element.lo -MD -MP -MF .deps/form_element.Tpo -c -o form_element.lo form_element.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT form_element.lo -MD -MP -MF .deps/form_element.Tpo -c form_element.cc -fPIC -DPIC -o .libs/form_element.o mv -f .deps/form_element.Tpo .deps/form_element.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT mass.lo -MD -MP -MF .deps/mass.Tpo -c -o mass.lo mass.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT mass.lo -MD -MP -MF .deps/mass.Tpo -c mass.cc -fPIC -DPIC -o .libs/mass.o mv -f .deps/mass.Tpo .deps/mass.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT inv_mass.lo -MD -MP -MF .deps/inv_mass.Tpo -c -o inv_mass.lo inv_mass.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT inv_mass.lo -MD -MP -MF .deps/inv_mass.Tpo -c inv_mass.cc -fPIC -DPIC -o .libs/inv_mass.o mv -f .deps/inv_mass.Tpo .deps/inv_mass.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT grad_grad.lo -MD -MP -MF .deps/grad_grad.Tpo -c -o grad_grad.lo grad_grad.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT grad_grad.lo -MD -MP -MF .deps/grad_grad.Tpo -c grad_grad.cc -fPIC -DPIC -o .libs/grad_grad.o mv -f .deps/grad_grad.Tpo .deps/grad_grad.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT d_ds.lo -MD -MP -MF .deps/d_ds.Tpo -c -o d_ds.lo d_ds.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT d_ds.lo -MD -MP -MF .deps/d_ds.Tpo -c d_ds.cc -fPIC -DPIC -o .libs/d_ds.o mv -f .deps/d_ds.Tpo .deps/d_ds.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT d2_ds2.lo -MD -MP -MF .deps/d2_ds2.Tpo -c -o d2_ds2.lo d2_ds2.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT d2_ds2.lo -MD -MP -MF .deps/d2_ds2.Tpo -c d2_ds2.cc -fPIC -DPIC -o .libs/d2_ds2.o mv -f .deps/d2_ds2.Tpo .deps/d2_ds2.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT grad.lo -MD -MP -MF .deps/grad.Tpo -c -o grad.lo grad.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT grad.lo -MD -MP -MF .deps/grad.Tpo -c grad.cc -fPIC -DPIC -o .libs/grad.o mv -f .deps/grad.Tpo .deps/grad.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT curl.lo -MD -MP -MF .deps/curl.Tpo -c -o curl.lo curl.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT curl.lo -MD -MP -MF .deps/curl.Tpo -c curl.cc -fPIC -DPIC -o .libs/curl.o mv -f .deps/curl.Tpo .deps/curl.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT div.lo -MD -MP -MF .deps/div.Tpo -c -o div.lo div.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT div.lo -MD -MP -MF .deps/div.Tpo -c div.cc -fPIC -DPIC -o .libs/div.o mv -f .deps/div.Tpo .deps/div.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT 2D.lo -MD -MP -MF .deps/2D.Tpo -c -o 2D.lo 2D.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT 2D.lo -MD -MP -MF .deps/2D.Tpo -c 2D.cc -fPIC -DPIC -o .libs/2D.o mv -f .deps/2D.Tpo .deps/2D.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT 2W.lo -MD -MP -MF .deps/2W.Tpo -c -o 2W.lo 2W.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT 2W.lo -MD -MP -MF .deps/2W.Tpo -c 2W.cc -fPIC -DPIC -o .libs/2W.o mv -f .deps/2W.Tpo .deps/2W.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT 2D_D.lo -MD -MP -MF .deps/2D_D.Tpo -c -o 2D_D.lo 2D_D.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT 2D_D.lo -MD -MP -MF .deps/2D_D.Tpo -c 2D_D.cc -fPIC -DPIC -o .libs/2D_D.o mv -f .deps/2D_D.Tpo .deps/2D_D.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT div_div.lo -MD -MP -MF .deps/div_div.Tpo -c -o div_div.lo div_div.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT div_div.lo -MD -MP -MF .deps/div_div.Tpo -c div_div.cc -fPIC -DPIC -o .libs/div_div.o mv -f .deps/div_div.Tpo .deps/div_div.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT convect.lo -MD -MP -MF .deps/convect.Tpo -c -o convect.lo convect.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT convect.lo -MD -MP -MF .deps/convect.Tpo -c convect.cc -fPIC -DPIC -o .libs/convect.o mv -f .deps/convect.Tpo .deps/convect.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT lumped_mass.lo -MD -MP -MF .deps/lumped_mass.Tpo -c -o lumped_mass.lo lumped_mass.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT lumped_mass.lo -MD -MP -MF .deps/lumped_mass.Tpo -c lumped_mass.cc -fPIC -DPIC -o .libs/lumped_mass.o mv -f .deps/lumped_mass.Tpo .deps/lumped_mass.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT lumped_inv_mass.lo -MD -MP -MF .deps/lumped_inv_mass.Tpo -c -o lumped_inv_mass.lo lumped_inv_mass.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT lumped_inv_mass.lo -MD -MP -MF .deps/lumped_inv_mass.Tpo -c lumped_inv_mass.cc -fPIC -DPIC -o .libs/lumped_inv_mass.o mv -f .deps/lumped_inv_mass.Tpo .deps/lumped_inv_mass.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT d_dx0.lo -MD -MP -MF .deps/d_dx0.Tpo -c -o d_dx0.lo d_dx0.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT d_dx0.lo -MD -MP -MF .deps/d_dx0.Tpo -c d_dx0.cc -fPIC -DPIC -o .libs/d_dx0.o mv -f .deps/d_dx0.Tpo .deps/d_dx0.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT d_dx1.lo -MD -MP -MF .deps/d_dx1.Tpo -c -o d_dx1.lo d_dx1.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT d_dx1.lo -MD -MP -MF .deps/d_dx1.Tpo -c d_dx1.cc -fPIC -DPIC -o .libs/d_dx1.o mv -f .deps/d_dx1.Tpo .deps/d_dx1.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT d_dx2.lo -MD -MP -MF .deps/d_dx2.Tpo -c -o d_dx2.lo d_dx2.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT d_dx2.lo -MD -MP -MF .deps/d_dx2.Tpo -c d_dx2.cc -fPIC -DPIC -o .libs/d_dx2.o mv -f .deps/d_dx2.Tpo .deps/d_dx2.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT d_ds_d_ds.lo -MD -MP -MF .deps/d_ds_d_ds.Tpo -c -o d_ds_d_ds.lo d_ds_d_ds.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT d_ds_d_ds.lo -MD -MP -MF .deps/d_ds_d_ds.Tpo -c d_ds_d_ds.cc -fPIC -DPIC -o .libs/d_ds_d_ds.o mv -f .deps/d_ds_d_ds.Tpo .deps/d_ds_d_ds.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT gradt_grad.lo -MD -MP -MF .deps/gradt_grad.Tpo -c -o gradt_grad.lo gradt_grad.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT gradt_grad.lo -MD -MP -MF .deps/gradt_grad.Tpo -c gradt_grad.cc -fPIC -DPIC -o .libs/gradt_grad.o mv -f .deps/gradt_grad.Tpo .deps/gradt_grad.Plo /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT 2m_dualweight.lo -MD -MP -MF .deps/2m_dualweight.Tpo -c -o 2m_dualweight.lo 2m_dualweight.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -I. -ansi -Wall -Wno-unused -Werror -MT 2m_dualweight.lo -MD -MP -MF .deps/2m_dualweight.Tpo -c 2m_dualweight.cc -fPIC -DPIC -o .libs/2m_dualweight.o mv -f .deps/2m_dualweight.Tpo .deps/2m_dualweight.Plo /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o libform_element.la form_element.lo mass.lo inv_mass.lo grad_grad.lo d_ds.lo d2_ds2.lo grad.lo curl.lo div.lo 2D.lo 2W.lo 2D_D.lo div_div.lo convect.lo lumped_mass.lo lumped_inv_mass.lo d_dx0.lo d_dx1.lo d_dx2.lo d_ds_d_ds.lo gradt_grad.lo 2m_dualweight.lo libtool: link: ar cru .libs/libform_element.a .libs/form_element.o .libs/mass.o .libs/inv_mass.o .libs/grad_grad.o .libs/d_ds.o .libs/d2_ds2.o .libs/grad.o .libs/curl.o .libs/div.o .libs/2D.o .libs/2W.o .libs/2D_D.o .libs/div_div.o .libs/convect.o .libs/lumped_mass.o .libs/lumped_inv_mass.o .libs/d_dx0.o .libs/d_dx1.o .libs/d_dx2.o .libs/d_ds_d_ds.o .libs/gradt_grad.o .libs/2m_dualweight.o libtool: link: ranlib .libs/libform_element.a libtool: link: ( cd ".libs" && rm -f "libform_element.la" && ln -s "../libform_element.la" "libform_element.la" ) /bin/bash ../../libtool --tag=CC --mode=link gcc -O2 -version-info 5:93:0 -release 5.93 -o librheolef.la -rpath /usr/lib libform_element.la ../lib/libfem.la ../basis/libbasis.la ../../skit/lib/libskit.la -lumfpack -lamd -lblas -lm libtool: link: gcc -shared -fPIC -DPIC -Wl,--whole-archive ./.libs/libform_element.a ../lib/.libs/libfem.a ../basis/.libs/libbasis.a ../../skit/lib/.libs/libskit.a -Wl,--no-whole-archive -lboost_iostreams -lumfpack -lamd -lblas -lm -O2 -Wl,-soname -Wl,librheolef-5.93.so.5 -o .libs/librheolef-5.93.so.5.0.93 libtool: link: (cd ".libs" && rm -f "librheolef-5.93.so.5" && ln -s "librheolef-5.93.so.5.0.93" "librheolef-5.93.so.5") libtool: link: (cd ".libs" && rm -f "librheolef.so" && ln -s "librheolef-5.93.so.5.0.93" "librheolef.so") libtool: link: ( cd ".libs" && rm -f "librheolef.la" && ln -s "../librheolef.la" "librheolef.la" ) cat ./d_dx0.h | \ col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name d_dx -section 7rheolef \ > d_dx.7rheolef cat mass.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name mass -section 7rheolef > mass.7rheolef cat inv_mass.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name inv_mass -section 7rheolef > inv_mass.7rheolef cat grad_grad.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name grad_grad -section 7rheolef > grad_grad.7rheolef cat d_ds.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name d_ds -section 7rheolef > d_ds.7rheolef cat d2_ds2.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name d2_ds2 -section 7rheolef > d2_ds2.7rheolef cat grad.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name grad -section 7rheolef > grad.7rheolef cat curl.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name curl -section 7rheolef > curl.7rheolef cat div.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name div -section 7rheolef > div.7rheolef cat 2D.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name 2D -section 7rheolef > 2D.7rheolef cat 2W.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name 2W -section 7rheolef > 2W.7rheolef cat 2D_D.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name 2D_D -section 7rheolef > 2D_D.7rheolef cat div_div.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name div_div -section 7rheolef > div_div.7rheolef cat convect.h | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name convect -section 7rheolef > convect.7rheolef cat ./d_dx0.h \ | col -b -x | ../../config/doc2texi -file nfem/form_element/d_dx0.h -node 'd_dx form,,, Forms' \ > d_dx.7texi cat mass.h | col -b -x | ../../config/doc2texi -file nfem/form_element/mass.h -node "mass form,,, Forms" > mass.7texi cat inv_mass.h | col -b -x | ../../config/doc2texi -file nfem/form_element/inv_mass.h -node "inv_mass form,,, Forms" > inv_mass.7texi cat grad_grad.h | col -b -x | ../../config/doc2texi -file nfem/form_element/grad_grad.h -node "grad_grad form,,, Forms" > grad_grad.7texi cat d_ds.h | col -b -x | ../../config/doc2texi -file nfem/form_element/d_ds.h -node "d_ds form,,, Forms" > d_ds.7texi cat d2_ds2.h | col -b -x | ../../config/doc2texi -file nfem/form_element/d2_ds2.h -node "d2_ds2 form,,, Forms" > d2_ds2.7texi cat grad.h | col -b -x | ../../config/doc2texi -file nfem/form_element/grad.h -node "grad form,,, Forms" > grad.7texi cat curl.h | col -b -x | ../../config/doc2texi -file nfem/form_element/curl.h -node "curl form,,, Forms" > curl.7texi cat div.h | col -b -x | ../../config/doc2texi -file nfem/form_element/div.h -node "div form,,, Forms" > div.7texi cat 2D.h | col -b -x | ../../config/doc2texi -file nfem/form_element/2D.h -node "2D form,,, Forms" > 2D.7texi cat 2W.h | col -b -x | ../../config/doc2texi -file nfem/form_element/2W.h -node "2W form,,, Forms" > 2W.7texi cat 2D_D.h | col -b -x | ../../config/doc2texi -file nfem/form_element/2D_D.h -node "2D_D form,,, Forms" > 2D_D.7texi cat div_div.h | col -b -x | ../../config/doc2texi -file nfem/form_element/div_div.h -node "div_div form,,, Forms" > div_div.7texi cat convect.h | col -b -x | ../../config/doc2texi -file nfem/form_element/convect.h -node "convect form,,, Forms" > convect.7texi Making all in bin g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT cad.o -MD -MP -MF .deps/cad.Tpo -c -o cad.o cad.cc mv -f .deps/cad.Tpo .deps/cad.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o cad cad.o -L/usr/lib ../form_element/librheolef.la -lumfpack -lamd -lblas libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o .libs/cad cad.o -L/usr/lib ../form_element/.libs/librheolef.so -lumfpack -lamd -lblas g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT xgeo.o -MD -MP -MF .deps/xgeo.Tpo -c -o xgeo.o xgeo.cc mv -f .deps/xgeo.Tpo .deps/xgeo.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o geo xgeo.o -L/usr/lib ../form_element/librheolef.la -lumfpack -lamd -lblas libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o .libs/geo xgeo.o -L/usr/lib ../form_element/.libs/librheolef.so -lumfpack -lamd -lblas g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT xspace.o -MD -MP -MF .deps/xspace.Tpo -c -o xspace.o xspace.cc mv -f .deps/xspace.Tpo .deps/xspace.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o space xspace.o -L/usr/lib ../form_element/librheolef.la -lumfpack -lamd -lblas libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o .libs/space xspace.o -L/usr/lib ../form_element/.libs/librheolef.so -lumfpack -lamd -lblas g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT xfield.o -MD -MP -MF .deps/xfield.Tpo -c -o xfield.o xfield.cc mv -f .deps/xfield.Tpo .deps/xfield.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o field xfield.o -L/usr/lib ../form_element/librheolef.la -lumfpack -lamd -lblas libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o .libs/field xfield.o -L/usr/lib ../form_element/.libs/librheolef.so -lumfpack -lamd -lblas g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT mfield.o -MD -MP -MF .deps/mfield.Tpo -c -o mfield.o mfield.cc mv -f .deps/mfield.Tpo .deps/mfield.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o mfield mfield.o -L/usr/lib ../form_element/librheolef.la -lumfpack -lamd -lblas libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o .libs/mfield mfield.o -L/usr/lib ../form_element/.libs/librheolef.so -lumfpack -lamd -lblas g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT branch.o -MD -MP -MF .deps/branch.Tpo -c -o branch.o branch.cc mv -f .deps/branch.Tpo .deps/branch.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o branch branch.o -L/usr/lib ../form_element/librheolef.la -lumfpack -lamd -lblas libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o .libs/branch branch.o -L/usr/lib ../form_element/.libs/librheolef.so -lumfpack -lamd -lblas g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT mkgeo_grid_1d.o -MD -MP -MF .deps/mkgeo_grid_1d.Tpo -c -o mkgeo_grid_1d.o mkgeo_grid_1d.cc mv -f .deps/mkgeo_grid_1d.Tpo .deps/mkgeo_grid_1d.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o mkgeo_grid_1d mkgeo_grid_1d.o -L/usr/lib ../form_element/librheolef.la -lumfpack -lamd -lblas libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o .libs/mkgeo_grid_1d mkgeo_grid_1d.o -L/usr/lib ../form_element/.libs/librheolef.so -lumfpack -lamd -lblas g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT mkgeo_grid_2d.o -MD -MP -MF .deps/mkgeo_grid_2d.Tpo -c -o mkgeo_grid_2d.o mkgeo_grid_2d.cc mv -f .deps/mkgeo_grid_2d.Tpo .deps/mkgeo_grid_2d.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o mkgeo_grid_2d mkgeo_grid_2d.o -L/usr/lib ../form_element/librheolef.la -lumfpack -lamd -lblas libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o .libs/mkgeo_grid_2d mkgeo_grid_2d.o -L/usr/lib ../form_element/.libs/librheolef.so -lumfpack -lamd -lblas g++ -DHAVE_CONFIG_H -I. -I../../config -I../../include -ansi -Wall -Wno-unused -Werror -MT mkgeo_grid_3d.o -MD -MP -MF .deps/mkgeo_grid_3d.Tpo -c -o mkgeo_grid_3d.o mkgeo_grid_3d.cc mv -f .deps/mkgeo_grid_3d.Tpo .deps/mkgeo_grid_3d.Po /bin/bash ../../libtool --tag=CXX --mode=link g++ -ansi -Wall -Wno-unused -Werror -o mkgeo_grid_3d mkgeo_grid_3d.o -L/usr/lib ../form_element/librheolef.la -lumfpack -lamd -lblas libtool: link: g++ -ansi -Wall -Wno-unused -Werror -o .libs/mkgeo_grid_3d mkgeo_grid_3d.o -L/usr/lib ../form_element/.libs/librheolef.so -lumfpack -lamd -lblas cat cad.cc | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name cad -section 1rheolef > cad.1rheolef cat ./xgeo.cc | \ col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name geo -section 1rheolef \ > geo.1rheolef cat ./xspace.cc | \ col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name space -section 1rheolef \ > space.1rheolef cat ./xfield.cc | \ col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name field -section 1rheolef \ > field.1rheolef cat mfield.cc | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name mfield -section 1rheolef > mfield.1rheolef cat branch.cc | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name branch -section 1rheolef > branch.1rheolef grep -e '^#' < bamg2geo | sed -e 's/^#//' | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name bamg2geo -section 1rheolef > bamg2geo.1rheolef grep -e '^#' < mesh2geo | sed -e 's/^#//' | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name mesh2geo -section 1rheolef > mesh2geo.1rheolef grep -e '^#' < tetgen2geo | sed -e 's/^#//' | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name tetgen2geo -section 1rheolef > tetgen2geo.1rheolef grep -e '^#' < msh2geo | sed -e 's/^#//' | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name msh2geo -section 1rheolef > msh2geo.1rheolef grep -e '^#' < grummp2geo | sed -e 's/^#//' | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name grummp2geo -section 1rheolef > grummp2geo.1rheolef grep -e '^#' < qmg2geo | sed -e 's/^#//' | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name qmg2geo -section 1rheolef > qmg2geo.1rheolef grep -e '^#' < cemagref2field | sed -e 's/^#//' | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name cemagref2field -section 1rheolef > cemagref2field.1rheolef grep -e '^#' < mkgeo_grid | sed -e 's/^#//' | col -b -x | ../../config/doc2man -package rheolef -version 5.93 -name mkgeo_grid -section 1rheolef > mkgeo_grid.1rheolef cat cad.cc | col -b -x | ../../config/doc2texi -file nfem/bin/cad.cc -node "cad command,,, Commands" > cad.1texi cat ./xgeo.cc | col -b -x | ../../config/doc2texi -file nfem/bin/xgeo.cc -node 'geo command,,, Commands' > geo.1texi cat ./xspace.cc | col -b -x | ../../config/doc2texi -file nfem/bin/xspace.cc -node 'space command,,, Commands' > space.1texi cat ./xfield.cc | col -b -x | ../../config/doc2texi -file nfem/bin/xfield.cc -node 'field command,,, Commands' > field.1texi cat mfield.cc | col -b -x | ../../config/doc2texi -file nfem/bin/mfield.cc -node "mfield command,,, Commands" > mfield.1texi cat branch.cc | col -b -x | ../../config/doc2texi -file nfem/bin/branch.cc -node "branch command,,, Commands" > branch.1texi grep -e '^#' < bamg2geo | sed -e 's/^#//' | col -b -x | ../../config/doc2texi -file nfem/bin/bamg2geo -node "bamg2geo command,,, Commands" > bamg2geo.1texi grep -e '^#' < mesh2geo | sed -e 's/^#//' | col -b -x | ../../config/doc2texi -file nfem/bin/mesh2geo -node "mesh2geo command,,, Commands" > mesh2geo.1texi grep -e '^#' < tetgen2geo | sed -e 's/^#//' | col -b -x | ../../config/doc2texi -file nfem/bin/tetgen2geo -node "tetgen2geo command,,, Commands" > tetgen2geo.1texi grep -e '^#' < msh2geo | sed -e 's/^#//' | col -b -x | ../../config/doc2texi -file nfem/bin/msh2geo -node "msh2geo command,,, Commands" > msh2geo.1texi grep -e '^#' < grummp2geo | sed -e 's/^#//' | col -b -x | ../../config/doc2texi -file nfem/bin/grummp2geo -node "grummp2geo command,,, Commands" > grummp2geo.1texi grep -e '^#' < qmg2geo | sed -e 's/^#//' | col -b -x | ../../config/doc2texi -file nfem/bin/qmg2geo -node "qmg2geo command,,, Commands" > qmg2geo.1texi grep -e '^#' < cemagref2field | sed -e 's/^#//' | col -b -x | ../../config/doc2texi -file nfem/bin/cemagref2field -node "cemagref2field command,,, Commands" > cemagref2field.1texi grep -e '^#' < mkgeo_grid | sed -e 's/^#//' | col -b -x | ../../config/doc2texi -file nfem/bin/mkgeo_grid -node "mkgeo_grid command,,, Commands" > mkgeo_grid.1texi Making all in vtk cd ../.. \ && CONFIG_FILES=nfem/vtk/gnocchi CONFIG_HEADERS= /bin/bash ./config.status config.status: creating nfem/vtk/gnocchi config.status: WARNING: 'nfem/vtk/gnocchi.in' seems to ignore the --datarootdir setting config.status: executing depfiles commands config.status: executing libtool commands chmod a+x gnocchi Making all in tst make[3]: Nothing to be done for `all'. make[3]: Nothing to be done for `all-am'. Making all in doc Making all in refman make[3]: Circular rheolef.texi <- rheolef.texi dependency dropped. make[3]: Circular rheolef.texi <- rheolef.texi dependency dropped. make[3]: Circular myversion.texi <- rheolef.texi dependency dropped. subdirs=config util/fdstream util/lib util/ublas skit/lib nfem/quadrature nfem/basis nfem/lib nfem/bin nfem/form_element doc/usrman /bin/bash ./merge_texi.sh ../.. ../.. config util/fdstream util/lib util/ublas skit/lib nfem/quadrature nfem/basis nfem/lib nfem/bin nfem/form_element doc/usrman ! file 'includes.p' created. ! file 'create-texi.p' created. ! scan and reorder manuals, as extrated from source code: ................................................................................... ! file 'menu.texi' created. ! file 'includes.texi' created. make make-included make[4]: Nothing to be done for `make-included'. grep '^dnl[ ][ ]*#' ../../configure.ac | \ sed -e 's/^dnl[ ][ ]*//' -e 's/^#//' | \ sed -e "s/\@PACKAGE\@/rheolef/g" -e "s/\@VERSION\@/5.93/g" | \ col -b -x | ../../config/doc2texi -chapter -file configure.ac > INSTALL.texi texi2html ./rheolef.texi ** menu entry without previous node: Abstract (l. 76) ** menu entry without previous node: Installing (l. 77) ** menu entry without previous node: Problems (l. 78) ** menu entry without previous node: Commands (l. 79) ** menu entry without previous node: Classes (l. 80) ** menu entry without previous node: Algorithms (l. 81) ** menu entry without previous node: Forms (l. 82) ** menu entry without previous node: Internals (l. 83) ** menu entry without previous node: FAQ for developers (l. 84) ** menu entry without previous node: Copying (l. 85) ** menu entry without previous node: Concept Index (l. 86) ** menu entry without previous node: Program Index (l. 87) ** menu entry without previous node: Class Index (l. 88) ** menu entry without previous node: Bilinear Form Index (l. 89) ** menu entry without previous node: Approximation Index (l. 90) ** menu entry without previous node: Function Index (l. 91) ** menu entry without previous node: File Format Index (l. 92) ** menu entry without previous node: Related Tool Index (l. 93) ** node_up `Top' for `Abstract' not found ** node_up `Top' for `Installing' not found ** node_up `Top' for `Problems' not found ** node_up `Top' for `Commands' not found ** node_up `Top' for `Classes' not found ** node_up `Top' for `Algorithms' not found ** node_up `Top' for `Forms' not found ** node_up `Top' for `Internals' not found ** node_up `Top' for `FAQ for developers' not found ** node_up `Top' for `Copying' not found ** node_up `Top' for `Concept Index' not found ** node_up `Top' for `Program Index' not found ** node_up `Top' for `Class Index' not found ** node_up `Top' for `Bilinear Form Index' not found ** node_up `Top' for `Approximation Index' not found ** node_up `Top' for `Function Index' not found ** node_up `Top' for `File Format Index' not found ** node_up `Top' for `Related Tool Index' not found ** `Installing' doesn't appear in menus ** `Problems' doesn't appear in menus ** `Commands' doesn't appear in menus ** `Classes' doesn't appear in menus ** `Algorithms' doesn't appear in menus ** `Forms' doesn't appear in menus ** `Internals' doesn't appear in menus ** `FAQ for developers' doesn't appear in menus ** `Copying' doesn't appear in menus ** `Concept Index' doesn't appear in menus ** `Program Index' doesn't appear in menus ** `Class Index' doesn't appear in menus ** `Bilinear Form Index' doesn't appear in menus ** `Approximation Index' doesn't appear in menus ** `Function Index' doesn't appear in menus ** `File Format Index' doesn't appear in menus ** `Related Tool Index' doesn't appear in menus *** Unknown node in menu entry `rheostream class' (in ./includes.texi l. 62) ** Unknown command `@noderheostream' (left as is) (in ./../../util/lib/rheostream.3texi l. 1) TEXINPUTS=./:./:../../demo/:../../config/: makeinfo -I . -I . ./rheolef.texi -o ./rheolef.info TEXINPUTS=./:./:../../demo/:../../config/: makeinfo -I . -I . --no-warn --no-header ./rheolef.texi > rheolef.txt grep -v @[a-z][a-z]index INSTALL.texi > INSTALL-tmp9455.texi makeinfo -I . --no-warn --no-header INSTALL-tmp9455.texi > INSTALL.txt /bin/rm -f INSTALL-tmp9455.texi cp INSTALL.txt ../../INSTALL Making all in usrman make[3]: Nothing to be done for `all'. Making all in doxygen make[3]: Nothing to be done for `all'. make[3]: Nothing to be done for `all-am'. make[2]: Nothing to be done for `all-am'. make[1]: Leaving directory `/«PKGBUILDDIR»' touch build-stamp fakeroot debian/rules binary-arch dh_testdir dh_testroot dh_clean dh_installdirs # Add here commands to install the package into DESTDIR /usr/bin/make install DESTDIR=/«PKGBUILDDIR»/debian/tmp-rheolef make[1]: Entering directory `/«PKGBUILDDIR»' Making install in config make install-am /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin' /bin/bash ../libtool --mode=install /bin/sh ../config/install-sh -c doc2man doc2texi doc2oxy '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin' libtool: install: /bin/sh ../config/install-sh -c doc2man /«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin/doc2man libtool: install: /bin/sh ../config/install-sh -c doc2texi /«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin/doc2texi libtool: install: /bin/sh ../config/install-sh -c doc2oxy /«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin/doc2oxy /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin' /bin/sh ../config/install-sh -c rheolef-config '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/lib/rheolef' /bin/sh ../config/install-sh -c -m 644 config.h rheolef.mk '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/lib/rheolef' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man1' /bin/sh ../config/install-sh -c -m 644 rheolef-config.1rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man1' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man9' /bin/sh ../config/install-sh -c -m 644 acinclude.9rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man9' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/rheolef' /bin/sh ../config/install-sh -c -m 644 check-shlibpath_var.sh '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/rheolef' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' /bin/sh ../config/install-sh -c -m 644 compiler.h dmalloc_return.h numeric_limits.h numeric_flags.h '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' Making install in util Making install in bamg /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin' /bin/bash ../../libtool --mode=install /bin/sh ../../config/install-sh -c bamg '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin' libtool: install: /bin/sh ../../config/install-sh -c bamg /«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin/bamg mkdirhier /«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef /bin/sh ../../config/install-sh -c -m 644 bamg.pdf /«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef/bamg.pdf /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man1' /bin/sh ../../config/install-sh -c -m 644 bamg.1rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man1' Making install in fdstream make install-am make[5]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' /bin/sh ../../config/install-sh -c -m 644 pstream.h fdstream.h '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' Making install in ublas make install-am make[5]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' /bin/sh ../../config/install-sh -c -m 644 ublas-io.h ublas-invert.h ublas_invert_3x3.h ublas_matrix_range.h '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' Making install in lib make install-am make[5]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man3' /bin/sh ../../config/install-sh -c -m 644 Vector.3rheolef iorheo.3rheolef catchmark.3rheolef rheostream.3rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man3' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man9' /bin/sh ../../config/install-sh -c -m 644 smart_pointer.9rheolef heap_allocator.9rheolef stack_allocator.9rheolef pretty_name.9rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man9' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' /bin/sh ../../config/install-sh -c -m 644 smart_pointer.h occurence.h pretty_name.h promote.h heap_object.h heap_allocator.h stack_allocator.h Vector.h iorheo.h iorheo-members.h catchmark.h iorheobase.h rheostream.h misc_algo.h the_clock.h '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' Making install in tst make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. Making install in skit Making install in lib make install-am make[5]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man3' /bin/sh ../../config/install-sh -c -m 644 vec.3rheolef csr.3rheolef ssk.3rheolef diag.3rheolef permutation.3rheolef ic0.3rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man3' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man5' /bin/sh ../../config/install-sh -c -m 644 pcg.5rheolef pminres.5rheolef puzawa.5rheolef mixed_solver.5rheolef bicgstab.5rheolef gmres.5rheolef qmr.5rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man5' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' /bin/sh ../../config/install-sh -c -m 644 skit.h csr.h csr_row.h csrrep.h avec.h avecrep.h vec.h ssk.h permutation.h diag.h eye.h ic0.h ic0-algo.h array.h dns.h inhb.h inhb-aux.h color.h outps.h outhb.h outmm.h outml.h out-sparse-matlab.h asr.h asrrep.h iotrick.h skitbase.h macros.h classes.h blas1-dense-no-tmpl.h blas1-sparse-no-tmpl.h num-algorithm.h csr-algorithm.h csr-algo-amulx.h csr-algo-cat.h csr-algo-trans.h csr-algo-amub.h csr-algo-aplb.h csr-algo-amuld.h csr-algo-dmula.h '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' /bin/sh ../../config/install-sh -c -m 644 csr-algo-trans-mult.h ssk-algorithm.h blas-algorithm.h blas1-dense.h blas1-sparse.h blas1-mixt.h blas1-mixt-no-tmpl.h blas2.h blas3.h blas3-no-tmpl.h cg.h bicg.h bicgstab.h cgs.h cheby.h gmres.h ir.h qmr.h gen_solver.h matrix_solver.h uzawa_abtb.h uzawa_abtbc.h urm_abtbc.h cg_abtbc.h cgup_abtbc.h puzawa.h pcg.h pminres.h mixed_solver.h genrcm.h rcm.h fnroot.h degree.h rootls.h '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' Making install in tst /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin' /bin/bash ../../libtool --mode=install /bin/sh ../../config/install-sh -c csr '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin' libtool: install: /bin/sh ../../config/install-sh -c csr /«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin/csr /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man1' /bin/sh ../../config/install-sh -c -m 644 csr.1rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man1' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. Making install in nfem Making install in data make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. Making install in quadrature make install-am make[5]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' /bin/sh ../../config/install-sh -c -m 644 sqr.icc jacobi.icc jacobi_roots.icc gamma.icc gauss_jacobi.icc gauss_radau_jacobi.icc gauss_lobatto_jacobi.icc gauss_chebyschev.icc gauss_radau_chebyschev.icc gauss_lobatto_chebyschev.icc gauss_legendre_check.icc gauss_chebyschev_check.icc gauss_jacobi_check.icc sqr.h jacobi.h jacobi_roots.h gamma.h gauss_jacobi.h gauss_radau_jacobi.h gauss_lobatto_jacobi.h gauss_chebyschev.h gauss_radau_chebyschev.h gauss_lobatto_chebyschev.h gauss_legendre_check.h gauss_chebyschev_check.h gauss_jacobi_check.h tqli.h pythag.h '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' Making install in basis sh make_basis_cxx.sh P0 P1 P2 bubble H3 ! file basis.cc unchanged. sh make_numbering_cxx.sh P0 P1 P2 P1d P2d bubble P1pw H3 ! file numbering.cc unchanged. make install-am sh make_basis_cxx.sh P0 P1 P2 bubble H3 ! file basis.cc unchanged. sh make_numbering_cxx.sh P0 P1 P2 P1d P2d bubble P1pw H3 ! file numbering.cc unchanged. make[5]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man3' /bin/sh ../../config/install-sh -c -m 644 point.3rheolef tensor.3rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man3' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man9' /bin/sh ../../config/install-sh -c -m 644 basis.9rheolef quadrature.9rheolef numbering.9rheolef reference_element.9rheolef geo_element.9rheolef point.9rheolef edge.9rheolef triangle.9rheolef quadrangle.9rheolef tetra.9rheolef prism.9rheolef hexa.9rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man9' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' /bin/sh ../../config/install-sh -c -m 644 point.h basic_point.h tensor.h tensor-eig3.h tensor-svd-algo.h reference_element.h geo_element.h geo_element_v1.h geo_element_v2.h tiny_element.h basis.h basis_rep.h basis_symbolic.h basis_symbolic_hermite.h basis_on_lattice.h numbering.h numbering_rep.h quadrature.h tiny_matvec.h tiny_lu.h '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' Making install in lib make install-am make[5]: Nothing to be done for `install-exec-am'. cd /«PKGBUILDDIR»/debian/tmp-rheolef/usr/include; rm -f rheolef.h; ln -s rheolef/rheolef.h rheolef.h /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man3' /bin/sh ../../config/install-sh -c -m 644 cad.3rheolef geo.3rheolef domain.3rheolef space.3rheolef field.3rheolef branch.3rheolef form.3rheolef form_diag.3rheolef trace.3rheolef form_manip.3rheolef form_diag_manip.3rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man3' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man5' /bin/sh ../../config/install-sh -c -m 644 riesz_representer.5rheolef newton.5rheolef damped-newton.5rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man5' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man9' /bin/sh ../../config/install-sh -c -m 644 form_element.9rheolef geomap.9rheolef iofem.9rheolef characteristic.9rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man9' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' /bin/sh ../../config/install-sh -c -m 644 rheolef.h rheobase.h iofem.h fem_helper.h field_element.h form_element.h form_element_rep.h cad.h cad_domain.h cad_element.h cad-bezier.h piola_v1.h piola_algo_v1.h geo_tree.h hazel.h hazel_1d.h geo.h georep.h geo-build.h geo-qmg.h geo-visu.h geo-visu-aux.h geo-connectivity.h geomap.h project.h characteristic.h riesz_representer.h exact_compose.h interface.h adapt_option.h domain.h meshpoint.h space.h spacerep.h field.h field-visu.h interpolate.h branch.h trace.h form.h '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' /bin/sh ../../config/install-sh -c -m 644 form_diag.h form_assembly.h form_diag_assembly.h form_manip.h form_diag_manip.h compute-bbox.h newton.h newton-backtrack.h damped-newton.h damped-newton-generic.h field-local-norm.h error-estimator-zz.h adapt-zz.h '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/include/rheolef' Making install in form_element make install-am sh make_form_element_cxx.sh mass inv_mass grad_grad d_ds d2_ds2 grad curl div 2D 2W 2D_D div_div convect lumped_mass lumped_inv_mass d_dx0 d_dx1 d_dx2 d_ds_d_ds gradt_grad 2m_dualweight ! file form_element.cc unchanged. sh make_form_element_cxx.sh mass inv_mass grad_grad d_ds d2_ds2 grad curl div 2D 2W 2D_D div_div convect lumped_mass lumped_inv_mass d_dx0 d_dx1 d_dx2 d_ds_d_ds gradt_grad 2m_dualweight ! file form_element.cc unchanged. /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/lib' /bin/bash ../../libtool --mode=install /bin/sh ../../config/install-sh -c librheolef.la '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/lib' libtool: install: /bin/sh ../../config/install-sh -c .libs/librheolef-5.93.so.5.0.93 /«PKGBUILDDIR»/debian/tmp-rheolef/usr/lib/librheolef-5.93.so.5.0.93 libtool: install: (cd /«PKGBUILDDIR»/debian/tmp-rheolef/usr/lib && { ln -s -f librheolef-5.93.so.5.0.93 librheolef-5.93.so.5 || { rm -f librheolef-5.93.so.5 && ln -s librheolef-5.93.so.5.0.93 librheolef-5.93.so.5; }; }) libtool: install: (cd /«PKGBUILDDIR»/debian/tmp-rheolef/usr/lib && { ln -s -f librheolef-5.93.so.5.0.93 librheolef.so || { rm -f librheolef.so && ln -s librheolef-5.93.so.5.0.93 librheolef.so; }; }) libtool: install: /bin/sh ../../config/install-sh -c .libs/librheolef.lai /«PKGBUILDDIR»/debian/tmp-rheolef/usr/lib/librheolef.la libtool: install: warning: remember to run `libtool --finish /usr/lib' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man7' /bin/sh ../../config/install-sh -c -m 644 d_dx.7rheolef mass.7rheolef inv_mass.7rheolef grad_grad.7rheolef d_ds.7rheolef d2_ds2.7rheolef grad.7rheolef curl.7rheolef div.7rheolef 2D.7rheolef 2W.7rheolef 2D_D.7rheolef div_div.7rheolef convect.7rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man7' Making install in bin /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin' /bin/bash ../../libtool --mode=install /bin/sh ../../config/install-sh -c cad geo space field mfield branch '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin' libtool: install: warning: `../form_element/librheolef.la' has not been installed in `/usr/lib' libtool: install: /bin/sh ../../config/install-sh -c .libs/cad /«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin/cad libtool: install: warning: `../form_element/librheolef.la' has not been installed in `/usr/lib' libtool: install: /bin/sh ../../config/install-sh -c .libs/geo /«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin/geo libtool: install: warning: `../form_element/librheolef.la' has not been installed in `/usr/lib' libtool: install: /bin/sh ../../config/install-sh -c .libs/space /«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin/space libtool: install: warning: `../form_element/librheolef.la' has not been installed in `/usr/lib' libtool: install: /bin/sh ../../config/install-sh -c .libs/field /«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin/field libtool: install: warning: `../form_element/librheolef.la' has not been installed in `/usr/lib' libtool: install: /bin/sh ../../config/install-sh -c .libs/mfield /«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin/mfield libtool: install: warning: `../form_element/librheolef.la' has not been installed in `/usr/lib' libtool: install: /bin/sh ../../config/install-sh -c .libs/branch /«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin/branch /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin' /bin/sh ../../config/install-sh -c bamg2geo mesh2geo tetgen2geo msh2geo grummp2geo qmg2geo cemagref2field mkgeo_grid '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/bin' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man1' /bin/sh ../../config/install-sh -c -m 644 cad.1rheolef geo.1rheolef space.1rheolef field.1rheolef mfield.1rheolef branch.1rheolef bamg2geo.1rheolef mesh2geo.1rheolef tetgen2geo.1rheolef msh2geo.1rheolef grummp2geo.1rheolef qmg2geo.1rheolef cemagref2field.1rheolef mkgeo_grid.1rheolef '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/man/man1' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/lib/rheolef' /bin/bash ../../libtool --mode=install /bin/sh ../../config/install-sh -c mkgeo_grid_1d mkgeo_grid_2d mkgeo_grid_3d '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/lib/rheolef' libtool: install: warning: `../form_element/librheolef.la' has not been installed in `/usr/lib' libtool: install: /bin/sh ../../config/install-sh -c .libs/mkgeo_grid_1d /«PKGBUILDDIR»/debian/tmp-rheolef/usr/lib/rheolef/mkgeo_grid_1d libtool: install: warning: `../form_element/librheolef.la' has not been installed in `/usr/lib' libtool: install: /bin/sh ../../config/install-sh -c .libs/mkgeo_grid_2d /«PKGBUILDDIR»/debian/tmp-rheolef/usr/lib/rheolef/mkgeo_grid_2d libtool: install: warning: `../form_element/librheolef.la' has not been installed in `/usr/lib' libtool: install: /bin/sh ../../config/install-sh -c .libs/mkgeo_grid_3d /«PKGBUILDDIR»/debian/tmp-rheolef/usr/lib/rheolef/mkgeo_grid_3d Making install in vtk make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/rheolef' /bin/sh ../../config/install-sh -c -m 644 mayavi_geo.py mayavi_field.py mayavi2_rheolef.py vtk_interactor.tcl vtk_widget_object.tcl vtk_volume_interactor.tcl vtk_volume.tcl vtk_elevation.tcl vtk_animate_elevation_mud.tcl tcl_percent.tcl tcl_toolbar.tcl tcl_balloon.tcl tcl_animate.tcl tcl_textbar.tcl tcl_font.tcl vtk_editor.tcl vtk_texture_threshold.vtk vtk_color_wheel.ppm fwrd.xbm pause.xbm prev.xbm random.xbm stop.xbm back.xbm next.xbm play.xbm quit.xbm repeat.xbm record.xbm arrow.xbm '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/rheolef' Making install in tst make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. Making install in doc Making install in refman make[3]: Circular rheolef.texi <- rheolef.texi dependency dropped. make[3]: Circular rheolef.texi <- rheolef.texi dependency dropped. make[3]: Circular myversion.texi <- rheolef.texi dependency dropped. texi2html ./rheolef.texi ** menu entry without previous node: Abstract (l. 76) ** menu entry without previous node: Installing (l. 77) ** menu entry without previous node: Problems (l. 78) ** menu entry without previous node: Commands (l. 79) ** menu entry without previous node: Classes (l. 80) ** menu entry without previous node: Algorithms (l. 81) ** menu entry without previous node: Forms (l. 82) ** menu entry without previous node: Internals (l. 83) ** menu entry without previous node: FAQ for developers (l. 84) ** menu entry without previous node: Copying (l. 85) ** menu entry without previous node: Concept Index (l. 86) ** menu entry without previous node: Program Index (l. 87) ** menu entry without previous node: Class Index (l. 88) ** menu entry without previous node: Bilinear Form Index (l. 89) ** menu entry without previous node: Approximation Index (l. 90) ** menu entry without previous node: Function Index (l. 91) ** menu entry without previous node: File Format Index (l. 92) ** menu entry without previous node: Related Tool Index (l. 93) ** node_up `Top' for `Abstract' not found ** node_up `Top' for `Installing' not found ** node_up `Top' for `Problems' not found ** node_up `Top' for `Commands' not found ** node_up `Top' for `Classes' not found ** node_up `Top' for `Algorithms' not found ** node_up `Top' for `Forms' not found ** node_up `Top' for `Internals' not found ** node_up `Top' for `FAQ for developers' not found ** node_up `Top' for `Copying' not found ** node_up `Top' for `Concept Index' not found ** node_up `Top' for `Program Index' not found ** node_up `Top' for `Class Index' not found ** node_up `Top' for `Bilinear Form Index' not found ** node_up `Top' for `Approximation Index' not found ** node_up `Top' for `Function Index' not found ** node_up `Top' for `File Format Index' not found ** node_up `Top' for `Related Tool Index' not found ** `Installing' doesn't appear in menus ** `Problems' doesn't appear in menus ** `Commands' doesn't appear in menus ** `Classes' doesn't appear in menus ** `Algorithms' doesn't appear in menus ** `Forms' doesn't appear in menus ** `Internals' doesn't appear in menus ** `FAQ for developers' doesn't appear in menus ** `Copying' doesn't appear in menus ** `Concept Index' doesn't appear in menus ** `Program Index' doesn't appear in menus ** `Class Index' doesn't appear in menus ** `Bilinear Form Index' doesn't appear in menus ** `Approximation Index' doesn't appear in menus ** `Function Index' doesn't appear in menus ** `File Format Index' doesn't appear in menus ** `Related Tool Index' doesn't appear in menus *** Unknown node in menu entry `rheostream class' (in ./includes.texi l. 62) ** Unknown command `@noderheostream' (left as is) (in ./../../util/lib/rheostream.3texi l. 1) make[4]: Nothing to be done for `install-exec-am'. make[4]: Circular rheolef.texi <- rheolef.texi dependency dropped. make[4]: Circular rheolef.texi <- rheolef.texi dependency dropped. make[4]: Circular myversion.texi <- rheolef.texi dependency dropped. texi2html ./rheolef.texi ** menu entry without previous node: Abstract (l. 76) ** menu entry without previous node: Installing (l. 77) ** menu entry without previous node: Problems (l. 78) ** menu entry without previous node: Commands (l. 79) ** menu entry without previous node: Classes (l. 80) ** menu entry without previous node: Algorithms (l. 81) ** menu entry without previous node: Forms (l. 82) ** menu entry without previous node: Internals (l. 83) ** menu entry without previous node: FAQ for developers (l. 84) ** menu entry without previous node: Copying (l. 85) ** menu entry without previous node: Concept Index (l. 86) ** menu entry without previous node: Program Index (l. 87) ** menu entry without previous node: Class Index (l. 88) ** menu entry without previous node: Bilinear Form Index (l. 89) ** menu entry without previous node: Approximation Index (l. 90) ** menu entry without previous node: Function Index (l. 91) ** menu entry without previous node: File Format Index (l. 92) ** menu entry without previous node: Related Tool Index (l. 93) ** node_up `Top' for `Abstract' not found ** node_up `Top' for `Installing' not found ** node_up `Top' for `Problems' not found ** node_up `Top' for `Commands' not found ** node_up `Top' for `Classes' not found ** node_up `Top' for `Algorithms' not found ** node_up `Top' for `Forms' not found ** node_up `Top' for `Internals' not found ** node_up `Top' for `FAQ for developers' not found ** node_up `Top' for `Copying' not found ** node_up `Top' for `Concept Index' not found ** node_up `Top' for `Program Index' not found ** node_up `Top' for `Class Index' not found ** node_up `Top' for `Bilinear Form Index' not found ** node_up `Top' for `Approximation Index' not found ** node_up `Top' for `Function Index' not found ** node_up `Top' for `File Format Index' not found ** node_up `Top' for `Related Tool Index' not found ** `Installing' doesn't appear in menus ** `Problems' doesn't appear in menus ** `Commands' doesn't appear in menus ** `Classes' doesn't appear in menus ** `Algorithms' doesn't appear in menus ** `Forms' doesn't appear in menus ** `Internals' doesn't appear in menus ** `FAQ for developers' doesn't appear in menus ** `Copying' doesn't appear in menus ** `Concept Index' doesn't appear in menus ** `Program Index' doesn't appear in menus ** `Class Index' doesn't appear in menus ** `Bilinear Form Index' doesn't appear in menus ** `Approximation Index' doesn't appear in menus ** `Function Index' doesn't appear in menus ** `File Format Index' doesn't appear in menus ** `Related Tool Index' doesn't appear in menus *** Unknown node in menu entry `rheostream class' (in ./includes.texi l. 62) ** Unknown command `@noderheostream' (left as is) (in ./../../util/lib/rheostream.3texi l. 1) TEXINPUTS=./:./:../../demo/:../../config/: MAKEINFO='makeinfo -I . -I .' texi2dvi ./rheolef.texi This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (././rheolef.texi (./texinfo.tex Loading texinfo [version 1999-03-26.17]: Basics, fonts, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, localization, and turning on texinfo input format.) (./myversion.texi) [1] [2] Chapter 1 (./introduction.texi) (./INSTALL.texi Chapter 2 [1] [2] Overfull \hbox (55.18257pt too wide) in paragraph at lines 60--60 [] @texttt firefox http://ljk.imag.fr/membres/Pierre.Saramito/rheolef/ rheolef.html[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 76--76 [] @texttt firefox http://ljk.imag.fr/membres/Pierre.Saramito/rheolef/ source_html/[] [3] [4] Overfull \hbox (49.43388pt too wide) in paragraph at lines 259--259 [] @texttt ./configure --with-taucs-ldadd='-ltaucs -llapack -lblas -lm etis -lg2c'[] [5] [6] Overfull \hbox (1.0965pt too wide) in paragraph at lines 443--445 []@textrm Set the home di-rec-tory for the @texttt cln[] @textrm li-brary. De- fault @textsl dir[]cln @textrm is `@texttt /usr/local/math[]@textrm '[]. [7] Overfull \hbox (31.82034pt too wide) in paragraph at lines 500--506 @textsl dir[]parmetis @textrm for @texttt libparmetis.so[]@textrm , @texttt li bparmetis.a[] @textrm and also @texttt libmetis.a[] libmetis.so[]@textrm . Overfull \hbox (83.97032pt too wide) in paragraph at lines 529--537 @texttt libumfpack.a[] @textrm and for header @textsl in-cdir[]umfpack@textrm /umfpack.h or @textsl in-cdir[]umfpack@textrm /umfpack/umfpack.h. [8] Overfull \hbox (0.94188pt too wide) in paragraph at lines 607--610 @textrm The user's man-ual goes into `@texttt doc/usrman/[]@textrm '[] and the the ref-er-ence man-ual into `@texttt doc/refman/[]@textrm '[]. [9] [10] Overfull \hbox (61.22774pt too wide) in paragraph at lines 782--786 $@textsy ^^O$ @textrm For par-tic-i-pat-ing to the rhe-olef con-cur-rent de-vel -op-ment, please con-tact also @texttt Pierre.Saramito@imag.fr[] ) Chapter 3 [11] [12] (./includes.texi Chapter 4 [13] [14] (../../nfem/bin/cemagref2field.1texi) (../../nfem/bin/bamg2geo.1texi [15] [16] Cross reference values unknown; you must run TeX again.) (../../nfem/bin/geo.1texi [17] [18] [19] Overfull \hbox (141.74222pt too wide) in paragraph at lines 293--293 [] @texttt geo -input-grummp -geo -upgrade -noverbose - < hex-multi. g > hex-multi.geo[] [20] Overfull \hbox (26.76846pt too wide) in paragraph at lines 332--332 [] @texttt geo -input-grummp -upgrade -geo - > multi-domain.geo[] [21] [22]) (../../nfem/bin/mesh2geo.1texi) (../../nfem/bin/mfield.1texi [23] [24] [25]) (../../nfem/bin/tetgen2geo.1texi [26]) (../../nfem/bin/branch.1texi [27] [28]) (../../nfem/bin/field.1texi [29] Overfull \hbox (26.43913pt too wide) in paragraph at lines 116--116 [] @texttt field -input-cemagref -field - < mytopo.cemagref > mytop o.field[] [30] [31] [32] Overfull \hbox (66.67995pt too wide) in paragraph at lines 298--298 [] @texttt field cube.field -cut -normal 0 1 0 -origin 0.5 0.5 0.5 -text > cube-cut.field[] ) (../../nfem/bin/space.1texi [33]) (../../nfem/bin/mkgeo_grid.1texi [34]) (../../nfem/bin/qmg2geo.1texi [35]) (../../nfem/bin/cad.1texi [36] [37]) (../../nfem/bin/grummp2geo.1texi) (../../nfem/bin/msh2geo.1texi) (../../config/rheolef-config.1texi [38] [39]) Chapter 5 [40] (../../nfem/lib/field.3texi) (../../nfem/lib/cad.3texi [41] Overfull \hbox (124.16682pt too wide) in paragraph at lines 57--57 [] @texttt void eval (const cad_element& S, const point& ref_coord, po int & real_coord) const;[] [42] Overfull \hbox (20.69044pt too wide) in paragraph at lines 63--63 [] @texttt friend std::ostream& operator << (std::ostream& os, const ca d& x);[] ) (../../nfem/lib/form.3texi [43] Overfull \hbox (95.42339pt too wide) in paragraph at lines 51--51 [] @texttt form (const space& X, const space& Y, const std::string& op_name , const domain& d);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 52--52 [] @texttt // Currently weighted forms in P2 spaces use a quadrature f ormula which is[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 54--54 [] @texttt form (const space& X, const space& Y, const std::string& op_name , const field& wh,[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 57--57 [] @texttt const domain& d, const field& wh, bool use_coordinate_system _weight=true);[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 68--68 [] @texttt bool for_locked_boundaries() const { return _for_locked_boundari es; }[] [44]) (../../nfem/lib/form_manip.3texi [45]) (../../nfem/lib/trace.3texi [46]) (../../nfem/lib/form_diag.3texi [47] Overfull \hbox (37.93651pt too wide) in paragraph at lines 45--45 [] @texttt friend class field operator * (const form_diag& a, const class f ield& x);[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [] @texttt friend form_diag operator / (const Float& lambda, const form_dia g& m);[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 56--56 [] @texttt friend std::ostream& operator << (std::ostream& s, const form_di ag& a);[] ) (../../nfem/lib/form_diag_manip.3texi [48] Overfull \hbox (26.43913pt too wide) in paragraph at lines 48--48 [] @texttt form_diag_manip& operator<< (form_diag_manip& (*pf)(form_diag_ma nip&));[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 53--53 [] @texttt friend form_diag_manip& operator << (form_diag_manip &fm, const class sized& s);[] ) (../../nfem/lib/branch.3texi [49] Overfull \hbox (43.6852pt too wide) in paragraph at lines 47--47 [] @texttt branch (const std::string& parameter_name, const std::string & u_name);[] Overfull \hbox (198.89977pt too wide) in paragraph at lines 48--48 [] @texttt branch (const std::string& parameter_name, const std::string & u_name, const std::string& p_name);[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 73--73 [] @texttt __obranch operator() (const Float& t, const field& u, const field& p);[] [50]) (../../nfem/lib/space.3texi [51] Overfull \hbox (141.41289pt too wide) in paragraph at lines 147--147 [] @texttt space (const geo& g, const std::string& approx_name, const std:: string& valued = "scalar");[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 149--149 [] @texttt const domain& interface, const domain& subgeo, const std::st ring& valued = "scalar");[] Overfull \hbox (147.16158pt too wide) in paragraph at lines 150--150 [] @texttt // For spaces with a discontinuity through domain `interfac e', but otherwise continuous[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 151--151 [] @texttt space (const geo& g, const domain& d, const std::string& approx_ name);[] [52] Overfull \hbox (83.92601pt too wide) in paragraph at lines 173--173 [] @texttt void set_periodic (const std::string& d1_name, const std::string & d2_name) const;[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 175--175 [] @texttt void lock_components (const std::string& d_name, point locked_di r) const;[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 177--177 [] @texttt void lock_components (const std::string& d_name, Function locked _dir) const;[] Overfull \hbox (164.40764pt too wide) in paragraph at lines 181--181 [] @texttt *! Current limitation: only 2D vector fields with component s having same FE approximation.[] Overfull \hbox (135.6642pt too wide) in paragraph at lines 182--182 [] @texttt *! The space has a dof for the direction normal to locked_d ir, while the value in the[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 184--184 [] @texttt *! The field::at function implements the reconstruction of the original cartesian components.[] [53] Overfull \hbox (20.69044pt too wide) in paragraph at lines 201--201 [] @texttt const basis& get_basis (size_type i_component = 0) const;[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 202--202 [] @texttt const numbering& get_numbering (size_type i_component = 0) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 203--203 [] @texttt std::string get_approx(size_type i_component = 0) const;[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 226--226 [] @texttt // for (2D) vector spaces only, field is only bloc ked along locked_dir[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 232--232 [] @texttt Float locked_component (size_type dof, size_type i_comp) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 234--234 [] @texttt Float unlocked_component (size_type dof, size_type i_comp) const;[] [54] Overfull \hbox (221.89452pt too wide) in paragraph at lines 251--251 [] @texttt // "global" variants differ only for boundary spaces (n on-global uses domain-indices, global use[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 253--253 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx) const;[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 254--254 [] @texttt void set_global_dof (const geo_element& K, tiny_vector& idx) const;[] Overfull \hbox (175.90501pt too wide) in paragraph at lines 255--255 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx, size_type i_comp) const;[] Overfull \hbox (175.90501pt too wide) in paragraph at lines 256--256 [] @texttt void set_global_dof (const geo_element& K, tiny_vector& idx, size_type i_comp) const;[] Overfull \hbox (423.09859pt too wide) in paragraph at lines 257--257 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx, size_type i_comp, reference_element::dof_family_type family) const;[] Overfull \hbox (239.14058pt too wide) in paragraph at lines 259--259 [] @texttt // Hermite/Argyris: returns 1 if the global dof contains the d erivative along outward normal of K, -1 else[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 260--260 [] @texttt void dof_orientation(const geo_element& K, tiny_vector& or ientation) const;[] ) (../../nfem/lib/geo.3texi [55] [56] Overfull \hbox (60.93126pt too wide) in paragraph at lines 90--90 [] @texttt for (geo::const_iterator_vertex i = g.begin_vertex(); i != g.end_n ode(); i++) {[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 102--102 [] @texttt for (geo::const_iterator_domain i = g.begin_domain(); i != i.end_d omain(); i++) {[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 126--126 [] @texttt void write_gnuplot_postscript_options (std::ostream& plot, const p lot_options& opt) const;[] [57] Overfull \hbox (106.92076pt too wide) in paragraph at lines 144--144 [] @texttt explicit geo (const std::string& filename, const std::string& coor d_sys = "cartesian");[] [58] Overfull \hbox (20.69044pt too wide) in paragraph at lines 191--191 [] @texttt void build_subregion(const domain& start_from, const domain& dont_ cross,[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 193--193 [] @texttt // Builds a new domain on the side of domain `dont_cross' on whic h `start_from'[] Overfull \hbox (112.66945pt too wide) in paragraph at lines 230--230 [] @texttt void localize_nearest (const point& x, point& y, geo_element::size _type& element) const;[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 231--231 [] @texttt bool trace (const point& x0, const point& v, point& x, Float& t, s ize_type& element) const;[] [59] Overfull \hbox (37.93651pt too wide) in paragraph at lines 249--249 [] @texttt normal (const class space& Nh, const domain& d, const interface& b c) const;[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 254--254 [] @texttt tangent (const class space& Nh, const domain& d, const interface& bc) const;[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 259--259 [] @texttt tangent_spline (const space& Nh, const domain& d, const interface& bc) const;[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 268--268 [] @texttt // Gives curvature of d in the (x,y) or (r,z) plane based on a s pline interpolation.[] Overfull \hbox (152.91026pt too wide) in paragraph at lines 272--272 [] @texttt // Gives curvature of d in the (x,y) or (r,z) plane based on a l ocal quadratic interpolation.[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 281--281 [] @texttt // Can also initialize orientation of domain through `bc' data s tructure.[] [60] Overfull \hbox (37.93651pt too wide) in paragraph at lines 305--305 [] @texttt void set_coordinate_system (const std::string&); // "cartesian", " rz", "zr"[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 307--307 [] @texttt void label_interface(const domain& dom1, const domain& dom2, const std::string& name);[] Overfull \hbox (112.66945pt too wide) in paragraph at lines 315--315 [] @texttt void init_localizer (const domain& boundary, Float tolerance=-1, i nt list_size=0) const;[] [61]) (../../nfem/lib/domain.3texi [62] Overfull \hbox (106.92076pt too wide) in paragraph at lines 47--47 [] @texttt void set(IteratorElement p, size_type n, size_type dim, cons t std::string& name);[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 51--51 [] @texttt friend std::ostream& operator << (std::ostream& s, const domai n& d);[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 53--53 [] @texttt std::ostream& put_vtk (std::ostream& vtk, Vector::const _iterator first_p,[] ) (../../nfem/basis/point.3texi Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [] @texttt explicit basic_point () { _x[0] = T(); _x[1] = T(); _x[2] = T(); }[] [63] Overfull \hbox (78.17732pt too wide) in paragraph at lines 39--39 [] @texttt { _x[0] = p._x[0]; _x[1] = p._x[1]; _x[2] = p._x[2]; return *this; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 43--43 [] @texttt T& operator[](int i_coord) { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 44--44 [] @texttt const T& operator[](int i_coord) const { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 45--45 [] @texttt T& operator()(int i_coord) { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 46--46 [] @texttt const T& operator()(int i_coord) const { return _x[i_coord% 3]; }[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 75--75 [] @texttt friend bool operator == (const basic_point& u, const basi c_point& v)[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 79--79 [] @texttt { _x[0] += v[0]; _x[1] += v[1]; _x[2] += v[2]; retur n *this; }[] [64] Overfull \hbox (43.6852pt too wide) in paragraph at lines 82--82 [] @texttt { _x[0] -= v[0]; _x[1] -= v[1]; _x[2] -= v[2]; retur n *this; }[] Overfull \hbox (112.66945pt too wide) in paragraph at lines 90--90 [] @texttt friend basic_point operator+ (const basic_point& u, co nst basic_point& v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 91--91 [] @texttt { return basic_point (u[0]+v[0], u[1]+v[1], u[2]+ v[2]); }[] Overfull \hbox (112.66945pt too wide) in paragraph at lines 96--96 [] @texttt friend basic_point operator- (const basic_point& u, co nst basic_point& v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 97--97 [] @texttt { return basic_point (u[0]-v[0], u[1]-v[1], u[2]- v[2]); }[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 100--100 [] @texttt friend basic_point operator* (const T1& a, const basic_po int& u)[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 106--106 [] @texttt friend basic_point operator/ (const basic_point& u, co nst T& a)[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 109--109 [] @texttt friend basic_point operator/ (const basic_point& u, ba sic_point v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 110--110 [] @texttt { return basic_point (u[0]/v[0], u[1]/v[1], u[2]/ v[2]); }[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 112--112 [] @texttt friend basic_point vect (const basic_point& v, const b asic_point& w)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 129--129 [] @texttt friend T dist2 (const basic_point& x, const basic_point< T>& y)[] [65] Overfull \hbox (14.94176pt too wide) in paragraph at lines 132--132 [] @texttt friend T dist (const basic_point& x, const basic_point& y)[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 135--135 [] @texttt friend T dist_infty (const basic_point& x, const basic_p oint& y)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 137--137 [] @texttt max(_my_abs(x[1]-y[1]), _my_abs(x[2]-y[ 2]))); }[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 149--149 []@texttt T mixt (const basic_point& u, const basic_point& v, const basi c_point& w);[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 151--151 []@texttt // robust(exact) floating point predicates: return value as (0, > 0, < 0)[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 160--160 [] @texttt const basic_point& c, const basic_point& x = basic_poi nt());[] ) (../../nfem/basis/tensor.3texi [66] Overfull \hbox (43.6852pt too wide) in paragraph at lines 54--54 [] @texttt friend std::ostream& operator << (std::ostream& out, const t ensor& a);[] [67] Overfull \hbox (78.17732pt too wide) in paragraph at lines 78--78 [] @texttt friend Float dist2 (const tensor& a, const tensor& b) { retu rn norm2(a-b); }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 79--79 [] @texttt friend Float norm (const tensor& a) { return ::sqrt(norm2(a )); }[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 80--80 [] @texttt friend Float dist (const tensor& a, const tensor& b) { retu rn norm(a-b); }[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 89--89 [] @texttt // where q=(q1,q2,q3) are eigenvectors in rows (othonormal m atrix)[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 90--90 [] @texttt // and d=(d1,d2,d3) are eigenvalues, sorted in decreasing order d1 >= d2 >= d3[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 98--98 [] @texttt // where u=(u1,u2,u3) are left pseudo-eigenvectors in rows ( othonormal matrix)[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 99--99 [] @texttt // v=(v1,v2,v3) are right pseudo-eigenvectors in rows (othonormal matrix)[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 100--100 [] @texttt // and s=(s1,s2,s3) are eigenvalues, sorted in decreasing order s1 >= s2 >= s3[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 112--112 []@texttt void cumul_otimes (tensor& t, const point& a, const point& b, size_t na = 3);[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 113--113 []@texttt void cumul_otimes (tensor& t, const point& a, const point& b, size_t na, size_t nb);[] ) (../../skit/lib/ic0.3texi [68]) (../../skit/lib/ssk.3texi [69] [70]) (../../skit/lib/permutation.3texi [71]) (../../skit/lib/vec.3texi [72] Overfull \hbox (135.6642pt too wide) in paragraph at lines 106--106 [] @texttt explicit vec (unsigned int n = 0, const T& init_value = std: :numeric_limits::max())[] [73] Overfull \hbox (20.69044pt too wide) in paragraph at lines 117--117 [] @texttt vec(const VExpr& x) : Array(x.size()) { assign (*this, x); }[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 121--121 [] @texttt { logmodif(*this); return assign (*t his, x); }[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 126--126 []@texttt template std::ostream& operator << (std::ostream&, const v ec&);[] ) (../../skit/lib/diag.3texi [74]) (../../skit/lib/csr.3texi [75] [76]) (../../util/lib/iorheo.3texi [77]) (../../util/lib/rheostream.3texi [78] Overfull \hbox (78.17732pt too wide) in paragraph at lines 133--133 [] @texttt irheostream(const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 135--135 [] @texttt void open (const std::string& name, const std::string& suffix = std::string());[] [79] Overfull \hbox (78.17732pt too wide) in paragraph at lines 143--143 [] @texttt orheostream(const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 145--145 [] @texttt void open (const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 160--160 []@texttt std::string delete_suffix (const std::string& name, const std::strin g& suffix);[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 169--169 []@texttt std::string get_full_name_from_rheo_path (const std::string& rootnam e, const std::string& suffix);[] ) (../../util/lib/Vector.3texi [80] [81] Overfull \hbox (49.43388pt too wide) in paragraph at lines 103--103 [] @texttt void insert (iterator position, const_iterator first, const_iter ator last);[] ) (../../util/lib/catchmark.3texi [82] Overfull \hbox (55.18257pt too wide) in paragraph at lines 26--26 [] @texttt friend std::istream& operator >> (std::istream& is, const ca tchmark& m);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 27--27 [] @texttt friend std::ostream& operator << (std::ostream& os, const ca tchmark& m);[] ) Chapter 6 [83] [84] (../../nfem/lib/riesz_representer.5texi) (../../nfem/lib/newton.5texi [85] Overfull \hbox (118.41814pt too wide) in paragraph at lines 40--40 []@texttt int newton (Problem P, Field& uh, Float& tol, size_t& max_iter, std: :ostream *p_cerr = 0) {[] ) (../../nfem/lib/damped-newton.5texi [86] Overfull \hbox (124.16682pt too wide) in paragraph at lines 41--41 []@texttt int damped_newton (Problem P, Field& u, Real& tol, Size& max_iter, s td::ostream* p_cerr=0) {[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 42--42 [] @texttt return damped_newton(P, newton_identity_preconditioner(), u, tol, max_iter, p_cerr);[] ) (../../skit/lib/pminres.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (89.6747pt too wide) in paragraph at lines 13--13 [] @texttt int pminres (const Matrix &A, Vector &x, const Vector &b, const Preconditioner &M,[] [87] Overfull \hbox (72.42863pt too wide) in paragraph at lines 62--62 []@texttt template [] Overfull \hbox (66.67995pt too wide) in paragraph at lines 63--63 []@texttt int pminres(const Matrix &A, Vector &x, const Vector &Mb, const Prec onditioner &M,[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 64--64 [] @texttt Size &max_iter, Real &tol, std::ostream *p_cerr = 0, std::string l abel = "minres")[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 74--74 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 75--75 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] 0 " << norm_r/norm_b < < std::endl;[] [88] [89] Overfull \hbox (124.16682pt too wide) in paragraph at lines 135--135 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << nor m_r/norm_b << std::endl;[] ) (../../skit/lib/puzawa.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (83.92601pt too wide) in paragraph at lines 13--13 [] @texttt int puzawa (const Matrix &A, Vector &x, const Vector &b, const P reconditioner &M,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14--14 [] @texttt int &max_iter, Real &tol, const Real& rho, std::ostream *p_cer r=0);[] [90] Overfull \hbox (78.17732pt too wide) in paragraph at lines 58--58 []@texttt template < class Matrix, class Vector, class Preconditioner, class R eal, class Size>[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 59--59 []@texttt int puzawa(const Matrix &A, Vector &x, const Vector &Mb, const Preco nditioner &M,[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 67--67 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (193.15108pt too wide) in paragraph at lines 72--72 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << sqrt(norm2_r/norm2_b) << std::endl;[] ) (../../skit/lib/gmres.5texi Overfull \hbox (60.93126pt too wide) in paragraph at lines 14--14 [] @texttt const Preconditioner &M, Matrix &H, Int m, Int &max_iter , Real &tol);[] [91] Overfull \hbox (98.24414pt too wide) in paragraph at lines 91--94 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . [92] [93] [94]) (../../skit/lib/pcg.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14--14 [] @texttt const Preconditioner &M, int &max_iter, Real &tol, std::ostrea m *p_cerr=0);[] [95] Overfull \hbox (98.24414pt too wide) in paragraph at lines 66--70 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . Overfull \hbox (78.17732pt too wide) in paragraph at lines 75--75 []@texttt template < class Matrix, class Vector, class Preconditioner, class R eal, class Size>[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 76--76 []@texttt int pcg(const Matrix &A, Vector &x, const Vector &Mb, const Precondi tioner &M,[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 77--77 [] @texttt Size &max_iter, Real &tol, std::ostream *p_cerr = 0, std::st ring label = "cg")[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 84--84 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (204.64845pt too wide) in paragraph at lines 90--90 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << ::sqrt(norm2_r/norm2_b) << std::endl;[] ) (../../skit/lib/qmr.5texi [96] Overfull \hbox (98.24414pt too wide) in paragraph at lines 75--78 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . ) (../../skit/lib/bicgstab.5texi [97] Overfull \hbox (98.24414pt too wide) in paragraph at lines 58--61 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . ) (../../skit/lib/mixed_solver.5texi Overfull \hbox (175.90501pt too wide) in paragraph at lines 20--20 [] @texttt template [] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21--21 [] @texttt int pcg_abtb (const Matrix& A, const Matrix& B, Vector& u, Vecto r& p,[] [98] Overfull \hbox (175.90501pt too wide) in paragraph at lines 26--26 [] @texttt template [] Overfull \hbox (118.41814pt too wide) in paragraph at lines 27--27 [] @texttt int pcg_abtbc (const Matrix& A, const Matrix& B, const Matrix& C , Vector& u, Vector& p,[] ) Chapter 7 [99] [100] (../../nfem/form_element/d_dx.7texi) (../../nfem/form_element/2W.7texi [101]) (../../nfem/form_element/2D.7texi) (../../nfem/form_element/convect.7texi) (../../nfem/form_element/div_div.7texi [102]) (../../nfem/form_element/inv_mass.7texi [103]) (../../nfem/form_element/mass.7texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 24--24 [] @texttt form (const space& V, const space& V, "mass", const domain& gamma);[] [104]) (../../nfem/form_element/div.7texi [105]) (../../nfem/form_element/d_ds.7texi) (../../nfem/form_element/curl.7texi [106]) (../../nfem/form_element/d2_ds2.7texi) (../../nfem/form_element/grad.7texi [107]) (../../nfem/form_element/grad_grad.7texi) (../../nfem/form_element/2D_D.7texi [108]) Chapter 8 [109] [110] (../../nfem/lib/form_element.9texi Overfull \hbox (118.41814pt too wide) in paragraph at lines 52--52 [] @texttt // for special forms for which coordinate-system specific w eights (ie, cylindrical[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 58--58 [] @texttt void operator() (const geo_element& K, ublas::matrix& m) const;[] ) (../../nfem/lib/iofem.9texi [111] Overfull \hbox (141.74222pt too wide) in paragraph at lines 24--24 [] @texttt cout << cut << origin(point(0.5, 0.5, 0.5)) << normal(po int(1,1,0) << uh;[] ) (../../nfem/lib/geomap.9texi [112] Overfull \hbox (66.67995pt too wide) in paragraph at lines 37--37 [] @texttt // Maps a quadrature-dependent lattice over Th_1 onto Th_2 triangulation.[] Overfull \hbox (221.89452pt too wide) in paragraph at lines 39--39 [] @texttt std::string quadrature="default", size_t ord er=0, bool allow_approximate_edges=true);[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 41--41 [] @texttt // Maps a quadrature-dependent lattice over Th_1 onto Th_2 triangulation[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 43--43 [] @texttt geomap (const geo& Th_2, const geo& Th_1, const field& advec tion_h_1,[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 44--44 [] @texttt std::string quadrature="default", size_t ord er=0) ;[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 47--47 [] @texttt // Maps space Vh_1 dof's onto the meshpoints of Th_2 triang ulation[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 52--52 [] @texttt // Same but for P1d, using points inside the triangle to pr eserve discontinuity[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 57--57 [] @texttt // Maps space Vh_1 dof's onto the meshpoints of Th_2 triang ulation[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 61--61 [] @texttt geomap (const geo& Th_2, const space& Vh_1, const field& adv ection_h_1);[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 63--63 [] @texttt // Does the same, but assumes that Th_2 is the triangulatio n for Vh_1[] Overfull \hbox (273.6327pt too wide) in paragraph at lines 64--64 [] @texttt geomap (const space& Vh_2, const field& advection_h_1, const geomap_option_type& opts = geomap_option_type());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 72--72 [] @texttt { if (!use_space) error_macro("Lattice-based geomaps use no space");[] [113] Overfull \hbox (89.6747pt too wide) in paragraph at lines 100--100 [] @texttt bool no_barycentric_weight() const { return _barycentric_wei ght == Float(0); }[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 110--110 [] @texttt meshpoint robust_advect_1 (const point& x0, const point& va, bool& is_inside) const;[] Overfull \hbox (279.3814pt too wide) in paragraph at lines 111--111 [] @texttt meshpoint robust_advect_N (const point& x0, const point& v0, const field& vh, size_t n, bool& is_inside) const;[] [114] Overfull \hbox (37.93651pt too wide) in paragraph at lines 138--138 []@texttt geomap::geomap (const geo& Th_2, const space& Vh_1, const field& adv ection) :[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 139--139 [] @texttt _Th_1 (Vh_1.get_geo()), _Th_2 (Th_2), _advection(advection), advected(true),[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 146--146 []@texttt geomap::geomap (const space& Vh_1, const field& advection, const geo map_option_type& opt) :[] Overfull \hbox (135.6642pt too wide) in paragraph at lines 147--147 [] @texttt _Th_1 (Vh_1.get_geo()), _Th_2 (Vh_1.get_geo()), _advection(a dvection), advected(true),[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 175--175 [] @texttt error_macro("The advection field should be defined on the or iginal mesh Th_1="[] [115] Overfull \hbox (20.69044pt too wide) in paragraph at lines 176--176 [] @texttt << Th_1.name() << " and not " << _advection.get_geo().na me());[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 204--204 []@texttt /* f being a field of space V, X a geomap on this space, foX=compos e(f,X) is their[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 211--211 []@texttt field compose (const field& f, const geomap& g, Float (*f_outside)(c onst point&));[] [116]) (../../nfem/lib/characteristic.9texi [117] Overfull \hbox (14.94176pt too wide) in paragraph at lines 57--57 [] @texttt field_o_characteristic(const field& fh, const characteristic & X);[] ) (../../nfem/basis/geo_element.9texi [118] [119] Overfull \hbox (89.6747pt too wide) in paragraph at lines 76--76 [] @texttt void build_subgeo(size_type subgeo_dim, size_type i_subgeo, geo_ element& S) const;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 98--98 [] @texttt friend std::ostream& operator << (std::ostream&, const geo_eleme nt&);[] ) (../../nfem/basis/prism.9texi [120] [121]) (../../nfem/basis/edge.9texi) (../../nfem/basis/tetra.9texi [122]) (../../nfem/basis/quadrature.9texi [123] Overfull \hbox (20.69044pt too wide) in paragraph at lines 68--68 [] @texttt mutable quadrature_on_geo _quad [reference_element::max_ size];[] ) (../../nfem/basis/reference_element.9texi [124] [125] Overfull \hbox (20.69044pt too wide) in paragraph at lines 81--81 [] @texttt size_type subgeo_size(size_type subgeo_dim, size_type i_subgeo) const;[] Overfull \hbox (221.89452pt too wide) in paragraph at lines 82--82 [] @texttt size_type subgeo_local_vertex(size_type subgeo_dim, size_type i_ subgeo, size_type i_subgeo_vertex) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 104--104 [] @texttt static const size_type _subgeo_size [max_size*4*max_n_su bgeo];[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 105--105 [] @texttt static const size_type _subgeo_local_vertex [max_size*4*max_n_su bgeo*max_subgeo_vertex];[] ) (../../nfem/basis/numbering.9texi [126] [127]) (../../nfem/basis/triangle.9texi) (../../nfem/basis/point.9texi [128]) (../../nfem/basis/basis.9texi Overfull \hbox (233.39189pt too wide) in paragraph at lines 49--49 [] @texttt size_type size (reference_element hat_K, dof_family_type famil y=reference_element::dof_family_max) const;[] [129]) (../../nfem/basis/hexa.9texi [130] [131]) (../../nfem/basis/quadrangle.9texi) (../../util/lib/heap_allocator.9texi [132] Overfull \hbox (147.16158pt too wide) in paragraph at lines 20--20 [] @texttt typedef map , heap_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24--24 [] @texttt for (map_type::iterator iter = a.begin(), last = a.end(); iter ! = last; iter++) {[] [133] Overfull \hbox (14.94176pt too wide) in paragraph at lines 60--60 [] @texttt : handler ((typename heap_allocator::handler_type*)(ha.hand ler))[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 88--88 [] @texttt size_type max_size() const { return std::numeric_limits::max() / sizeof(T); }[] [134]) (../../util/lib/pretty_name.9texi Overfull \hbox (135.6642pt too wide) in paragraph at lines 16--16 [] @texttt typedef map , heap_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24--24 []@texttt /// @brief get string from a type, with an optional pretty-printing for complex types[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 29--29 []@texttt template std::string typename_of (T x) { return typename_macro(T); }[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 30--30 []@texttt template std::string pretty_typename_of (T x) { return pre tty_typename_macro(T); }[] ) (../../util/lib/smart_pointer.9texi [135] [136]) (../../util/lib/stack_allocator.9texi Overfull \hbox (35.10944pt too wide) in paragraph at lines 16--19 @textrm ex-cep-tion is em-mited. For a non-limited mem-ory han-dler in the same spirit, see @texttt "@textrm heap[]allocator@texttt "@textrm (9). Overfull \hbox (72.42863pt too wide) in paragraph at lines 24--24 [] @texttt stack_allocator stack_alloc (stack.begin().operator->(), stack.size());[] Overfull \hbox (152.91026pt too wide) in paragraph at lines 25--25 [] @texttt typedef map , stack_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 29--29 [] @texttt for (map_type::iterator iter = a.begin(), last = a.end(); iter ! = last; iter++) {[] [137] Overfull \hbox (20.69044pt too wide) in paragraph at lines 70--70 [] @texttt : handler ((typename stack_allocator::handler_type*)(sa.han dler))[] [138] Overfull \hbox (129.91551pt too wide) in paragraph at lines 99--99 [] @texttt size_type max_size() const { return std::numeric_limits::max() / sizeof(T); }[] [139] Overfull \hbox (43.6852pt too wide) in paragraph at lines 161--161 [] @texttt warning_macro ("stack_allocator::mem_info cstori: size="<< max_size);[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 165--165 [] @texttt warning_macro ("stack_allocator::mem_info dstor: size="<& lhs, const stack_allocat or& rhs) throw()[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 178--178 []@texttt bool operator!=( const stack_allocator& lhs, const stack_allocat or& rhs) throw()[] ) (../../config/acinclude.9texi [140] Overfull \hbox (17.42508pt too wide) in paragraph at lines 107--118 []@textrm Check to see if spooles li-brary and head-ers ex-ists. If so, set the shell vari-able @texttt "@textrm rheo[]have[]spooles@texttt " Overfull \hbox (24.59909pt too wide) in paragraph at lines 107--118 @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]SPOOLES and su b-stitues IN-CLUDES[]SPOOLES and LADD[]SPOOLES [141] Overfull \hbox (29.95679pt too wide) in paragraph at lines 122--133 []@textrm Check to see if umf-pack li-brary and head-ers ex-ists. If so, set th e shell vari-able @texttt "@textrm rheo[]have[]umfpack@texttt " Overfull \hbox (40.56772pt too wide) in paragraph at lines 122--133 @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]UMFPACK and su b-stitues IN-CLUDES[]UMFPACK and LADD[]UMFPACK Overfull \hbox (33.95523pt too wide) in paragraph at lines 137--148 @textrm ex-ists. If so, set the shell vari-able @texttt rheo_have_malloc_dbg[] @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]MALLOC[]DBG, Overfull \hbox (37.5711pt too wide) in paragraph at lines 155--160 []@textrm Check whether the dmal-loc pack-age ex-ists and set the cor-re-spond- ing shell value @texttt "@textrm rheo[]have[]dmalloc@texttt " Overfull \hbox (10.89465pt too wide) in paragraph at lines 155--160 @textrm and HAVE[]DMALLOC (in Make-file.am and con-fig.h) ac-cord-ingly, cre-at e LDADD[]DMALLOC [142] [143] [144] Overfull \hbox (18.00768pt too wide) in paragraph at lines 372--377 []@textrm Check wheter we are us-ing CRAY C@texttt ++ @textrm com-piler. If so, set the shell vari-able @texttt "@textrm ac[]cv[]prog[]cray[]cc@texttt " Overfull \hbox (5.96268pt too wide) in paragraph at lines 380--386 []@textrm Check wheter we are us-ing DEC C@texttt ++ @textrm com-piler. If so, set the shell vari-able @texttt "@textrm ac[]cv[]prog[]dec[]cc@texttt " Overfull \hbox (83.07622pt too wide) in paragraph at lines 398--406 []@textrm If so, sub-stitue REC-OG-NIZED[]CXX to a spe-cific com-piler's rule f ile, e.g, @texttt "@textrm $@texttt {@textrm top[]srcdir@texttt }@textrm /confi g/gnu[]cxx.mk@texttt "@textrm , [145])) (./FAQ.texi Chapter 9 [146] Overfull \hbox (10.36597pt too wide) in paragraph at lines 77--82 []@textrm the au-to-mat-i-cally gen-er-ated script, scan the ma-chine and tran s-late `@texttt config.h.in[]@textrm '[], [147] [148]) (./gpl.texi Appendix @char @appendixno [149] [150] Underfull \hbox (badness 2368) in paragraph at lines 63--63 []@secrm TERMS AND CON-DI-TIONS FOR COPY-ING, [151] [152] [153] [154] [155] [156]) (Concept Index) [157] [158] (Program Index) [159] [160] (Class Index) [161] [162] (Form Index) [163] [164] (Approximation Index) [165] [166] (Function Index) [167] [168] (File Format Index) [169] [170] (Related Tool Index) [171] [172] [173] [174] (./rheolef.toc) [-1] [-2] (./rheolef.toc [-3] [-4] [-5]) [-6] ) (see the transcript file for additional information) Output written on rheolef.dvi (182 pages, 359956 bytes). Transcript written on rheolef.log. This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (././rheolef.texi (./texinfo.tex Loading texinfo [version 1999-03-26.17]: Basics, fonts, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, localization, and turning on texinfo input format.) (./rheolef.aux) (./myversion.texi) [1] [2] Chapter 1 (./introduction.texi) (./INSTALL.texi Chapter 2 [1] [2] Overfull \hbox (55.18257pt too wide) in paragraph at lines 60--60 [] @texttt firefox http://ljk.imag.fr/membres/Pierre.Saramito/rheolef/ rheolef.html[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 76--76 [] @texttt firefox http://ljk.imag.fr/membres/Pierre.Saramito/rheolef/ source_html/[] [3] [4] Overfull \hbox (49.43388pt too wide) in paragraph at lines 259--259 [] @texttt ./configure --with-taucs-ldadd='-ltaucs -llapack -lblas -lm etis -lg2c'[] [5] [6] Overfull \hbox (1.0965pt too wide) in paragraph at lines 443--445 []@textrm Set the home di-rec-tory for the @texttt cln[] @textrm li-brary. De- fault @textsl dir[]cln @textrm is `@texttt /usr/local/math[]@textrm '[]. [7] Overfull \hbox (31.82034pt too wide) in paragraph at lines 500--506 @textsl dir[]parmetis @textrm for @texttt libparmetis.so[]@textrm , @texttt li bparmetis.a[] @textrm and also @texttt libmetis.a[] libmetis.so[]@textrm . Overfull \hbox (83.97032pt too wide) in paragraph at lines 529--537 @texttt libumfpack.a[] @textrm and for header @textsl in-cdir[]umfpack@textrm /umfpack.h or @textsl in-cdir[]umfpack@textrm /umfpack/umfpack.h. [8] Overfull \hbox (0.94188pt too wide) in paragraph at lines 607--610 @textrm The user's man-ual goes into `@texttt doc/usrman/[]@textrm '[] and the the ref-er-ence man-ual into `@texttt doc/refman/[]@textrm '[]. [9] [10] Overfull \hbox (61.22774pt too wide) in paragraph at lines 782--786 $@textsy ^^O$ @textrm For par-tic-i-pat-ing to the rhe-olef con-cur-rent de-vel -op-ment, please con-tact also @texttt Pierre.Saramito@imag.fr[] ) Chapter 3 [11] [12] (./includes.texi Chapter 4 [13] [14] (../../nfem/bin/cemagref2field.1texi) (../../nfem/bin/bamg2geo.1texi [15] [16]) (../../nfem/bin/geo.1texi [17] [18] [19] Overfull \hbox (141.74222pt too wide) in paragraph at lines 293--293 [] @texttt geo -input-grummp -geo -upgrade -noverbose - < hex-multi. g > hex-multi.geo[] [20] Overfull \hbox (26.76846pt too wide) in paragraph at lines 332--332 [] @texttt geo -input-grummp -upgrade -geo - > multi-domain.geo[] [21] [22]) (../../nfem/bin/mesh2geo.1texi) (../../nfem/bin/mfield.1texi [23] [24] [25]) (../../nfem/bin/tetgen2geo.1texi [26]) (../../nfem/bin/branch.1texi [27] [28]) (../../nfem/bin/field.1texi [29] Overfull \hbox (26.43913pt too wide) in paragraph at lines 116--116 [] @texttt field -input-cemagref -field - < mytopo.cemagref > mytop o.field[] [30] [31] [32] Overfull \hbox (66.67995pt too wide) in paragraph at lines 298--298 [] @texttt field cube.field -cut -normal 0 1 0 -origin 0.5 0.5 0.5 -text > cube-cut.field[] ) (../../nfem/bin/space.1texi [33]) (../../nfem/bin/mkgeo_grid.1texi [34]) (../../nfem/bin/qmg2geo.1texi [35]) (../../nfem/bin/cad.1texi [36] [37]) (../../nfem/bin/grummp2geo.1texi) (../../nfem/bin/msh2geo.1texi) (../../config/rheolef-config.1texi [38] [39]) Chapter 5 [40] (../../nfem/lib/field.3texi) (../../nfem/lib/cad.3texi [41] Overfull \hbox (124.16682pt too wide) in paragraph at lines 57--57 [] @texttt void eval (const cad_element& S, const point& ref_coord, po int & real_coord) const;[] [42] Overfull \hbox (20.69044pt too wide) in paragraph at lines 63--63 [] @texttt friend std::ostream& operator << (std::ostream& os, const ca d& x);[] ) (../../nfem/lib/form.3texi Overfull \hbox (95.42339pt too wide) in paragraph at lines 51--51 [] @texttt form (const space& X, const space& Y, const std::string& op_name , const domain& d);[] [43] Overfull \hbox (72.42863pt too wide) in paragraph at lines 52--52 [] @texttt // Currently weighted forms in P2 spaces use a quadrature f ormula which is[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 54--54 [] @texttt form (const space& X, const space& Y, const std::string& op_name , const field& wh,[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 57--57 [] @texttt const domain& d, const field& wh, bool use_coordinate_system _weight=true);[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 68--68 [] @texttt bool for_locked_boundaries() const { return _for_locked_boundari es; }[] [44]) (../../nfem/lib/form_manip.3texi [45]) (../../nfem/lib/trace.3texi [46]) (../../nfem/lib/form_diag.3texi Overfull \hbox (37.93651pt too wide) in paragraph at lines 45--45 [] @texttt friend class field operator * (const form_diag& a, const class f ield& x);[] [47] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [] @texttt friend form_diag operator / (const Float& lambda, const form_dia g& m);[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 56--56 [] @texttt friend std::ostream& operator << (std::ostream& s, const form_di ag& a);[] ) (../../nfem/lib/form_diag_manip.3texi [48] Overfull \hbox (26.43913pt too wide) in paragraph at lines 48--48 [] @texttt form_diag_manip& operator<< (form_diag_manip& (*pf)(form_diag_ma nip&));[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 53--53 [] @texttt friend form_diag_manip& operator << (form_diag_manip &fm, const class sized& s);[] ) (../../nfem/lib/branch.3texi [49] Overfull \hbox (43.6852pt too wide) in paragraph at lines 47--47 [] @texttt branch (const std::string& parameter_name, const std::string & u_name);[] Overfull \hbox (198.89977pt too wide) in paragraph at lines 48--48 [] @texttt branch (const std::string& parameter_name, const std::string & u_name, const std::string& p_name);[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 73--73 [] @texttt __obranch operator() (const Float& t, const field& u, const field& p);[] ) (../../nfem/lib/space.3texi [50] [51] Overfull \hbox (141.41289pt too wide) in paragraph at lines 147--147 [] @texttt space (const geo& g, const std::string& approx_name, const std:: string& valued = "scalar");[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 149--149 [] @texttt const domain& interface, const domain& subgeo, const std::st ring& valued = "scalar");[] Overfull \hbox (147.16158pt too wide) in paragraph at lines 150--150 [] @texttt // For spaces with a discontinuity through domain `interfac e', but otherwise continuous[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 151--151 [] @texttt space (const geo& g, const domain& d, const std::string& approx_ name);[] [52] Overfull \hbox (83.92601pt too wide) in paragraph at lines 173--173 [] @texttt void set_periodic (const std::string& d1_name, const std::string & d2_name) const;[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 175--175 [] @texttt void lock_components (const std::string& d_name, point locked_di r) const;[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 177--177 [] @texttt void lock_components (const std::string& d_name, Function locked _dir) const;[] Overfull \hbox (164.40764pt too wide) in paragraph at lines 181--181 [] @texttt *! Current limitation: only 2D vector fields with component s having same FE approximation.[] Overfull \hbox (135.6642pt too wide) in paragraph at lines 182--182 [] @texttt *! The space has a dof for the direction normal to locked_d ir, while the value in the[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 184--184 [] @texttt *! The field::at function implements the reconstruction of the original cartesian components.[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 201--201 [] @texttt const basis& get_basis (size_type i_component = 0) const;[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 202--202 [] @texttt const numbering& get_numbering (size_type i_component = 0) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 203--203 [] @texttt std::string get_approx(size_type i_component = 0) const;[] [53] Overfull \hbox (101.17207pt too wide) in paragraph at lines 226--226 [] @texttt // for (2D) vector spaces only, field is only bloc ked along locked_dir[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 232--232 [] @texttt Float locked_component (size_type dof, size_type i_comp) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 234--234 [] @texttt Float unlocked_component (size_type dof, size_type i_comp) const;[] Overfull \hbox (221.89452pt too wide) in paragraph at lines 251--251 [] @texttt // "global" variants differ only for boundary spaces (n on-global uses domain-indices, global use[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 253--253 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx) const;[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 254--254 [] @texttt void set_global_dof (const geo_element& K, tiny_vector& idx) const;[] [54] Overfull \hbox (175.90501pt too wide) in paragraph at lines 255--255 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx, size_type i_comp) const;[] Overfull \hbox (175.90501pt too wide) in paragraph at lines 256--256 [] @texttt void set_global_dof (const geo_element& K, tiny_vector& idx, size_type i_comp) const;[] Overfull \hbox (423.09859pt too wide) in paragraph at lines 257--257 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx, size_type i_comp, reference_element::dof_family_type family) const;[] Overfull \hbox (239.14058pt too wide) in paragraph at lines 259--259 [] @texttt // Hermite/Argyris: returns 1 if the global dof contains the d erivative along outward normal of K, -1 else[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 260--260 [] @texttt void dof_orientation(const geo_element& K, tiny_vector& or ientation) const;[] ) (../../nfem/lib/geo.3texi [55] Overfull \hbox (60.93126pt too wide) in paragraph at lines 90--90 [] @texttt for (geo::const_iterator_vertex i = g.begin_vertex(); i != g.end_n ode(); i++) {[] [56] Overfull \hbox (72.42863pt too wide) in paragraph at lines 102--102 [] @texttt for (geo::const_iterator_domain i = g.begin_domain(); i != i.end_d omain(); i++) {[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 126--126 [] @texttt void write_gnuplot_postscript_options (std::ostream& plot, const p lot_options& opt) const;[] Overfull \hbox (106.92076pt too wide) in paragraph at lines 144--144 [] @texttt explicit geo (const std::string& filename, const std::string& coor d_sys = "cartesian");[] [57] Overfull \hbox (20.69044pt too wide) in paragraph at lines 191--191 [] @texttt void build_subregion(const domain& start_from, const domain& dont_ cross,[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 193--193 [] @texttt // Builds a new domain on the side of domain `dont_cross' on whic h `start_from'[] [58] Overfull \hbox (112.66945pt too wide) in paragraph at lines 230--230 [] @texttt void localize_nearest (const point& x, point& y, geo_element::size _type& element) const;[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 231--231 [] @texttt bool trace (const point& x0, const point& v, point& x, Float& t, s ize_type& element) const;[] [59] Overfull \hbox (37.93651pt too wide) in paragraph at lines 249--249 [] @texttt normal (const class space& Nh, const domain& d, const interface& b c) const;[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 254--254 [] @texttt tangent (const class space& Nh, const domain& d, const interface& bc) const;[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 259--259 [] @texttt tangent_spline (const space& Nh, const domain& d, const interface& bc) const;[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 268--268 [] @texttt // Gives curvature of d in the (x,y) or (r,z) plane based on a s pline interpolation.[] Overfull \hbox (152.91026pt too wide) in paragraph at lines 272--272 [] @texttt // Gives curvature of d in the (x,y) or (r,z) plane based on a l ocal quadratic interpolation.[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 281--281 [] @texttt // Can also initialize orientation of domain through `bc' data s tructure.[] [60] Overfull \hbox (37.93651pt too wide) in paragraph at lines 305--305 [] @texttt void set_coordinate_system (const std::string&); // "cartesian", " rz", "zr"[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 307--307 [] @texttt void label_interface(const domain& dom1, const domain& dom2, const std::string& name);[] Overfull \hbox (112.66945pt too wide) in paragraph at lines 315--315 [] @texttt void init_localizer (const domain& boundary, Float tolerance=-1, i nt list_size=0) const;[] [61]) (../../nfem/lib/domain.3texi Overfull \hbox (106.92076pt too wide) in paragraph at lines 47--47 [] @texttt void set(IteratorElement p, size_type n, size_type dim, cons t std::string& name);[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 51--51 [] @texttt friend std::ostream& operator << (std::ostream& s, const domai n& d);[] [62] Overfull \hbox (89.6747pt too wide) in paragraph at lines 53--53 [] @texttt std::ostream& put_vtk (std::ostream& vtk, Vector::const _iterator first_p,[] ) (../../nfem/basis/point.3texi Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [] @texttt explicit basic_point () { _x[0] = T(); _x[1] = T(); _x[2] = T(); }[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 39--39 [] @texttt { _x[0] = p._x[0]; _x[1] = p._x[1]; _x[2] = p._x[2]; return *this; }[] [63] Overfull \hbox (14.94176pt too wide) in paragraph at lines 43--43 [] @texttt T& operator[](int i_coord) { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 44--44 [] @texttt const T& operator[](int i_coord) const { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 45--45 [] @texttt T& operator()(int i_coord) { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 46--46 [] @texttt const T& operator()(int i_coord) const { return _x[i_coord% 3]; }[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 75--75 [] @texttt friend bool operator == (const basic_point& u, const basi c_point& v)[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 79--79 [] @texttt { _x[0] += v[0]; _x[1] += v[1]; _x[2] += v[2]; retur n *this; }[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 82--82 [] @texttt { _x[0] -= v[0]; _x[1] -= v[1]; _x[2] -= v[2]; retur n *this; }[] [64] Overfull \hbox (112.66945pt too wide) in paragraph at lines 90--90 [] @texttt friend basic_point operator+ (const basic_point& u, co nst basic_point& v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 91--91 [] @texttt { return basic_point (u[0]+v[0], u[1]+v[1], u[2]+ v[2]); }[] Overfull \hbox (112.66945pt too wide) in paragraph at lines 96--96 [] @texttt friend basic_point operator- (const basic_point& u, co nst basic_point& v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 97--97 [] @texttt { return basic_point (u[0]-v[0], u[1]-v[1], u[2]- v[2]); }[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 100--100 [] @texttt friend basic_point operator* (const T1& a, const basic_po int& u)[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 106--106 [] @texttt friend basic_point operator/ (const basic_point& u, co nst T& a)[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 109--109 [] @texttt friend basic_point operator/ (const basic_point& u, ba sic_point v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 110--110 [] @texttt { return basic_point (u[0]/v[0], u[1]/v[1], u[2]/ v[2]); }[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 112--112 [] @texttt friend basic_point vect (const basic_point& v, const b asic_point& w)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 129--129 [] @texttt friend T dist2 (const basic_point& x, const basic_point< T>& y)[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 132--132 [] @texttt friend T dist (const basic_point& x, const basic_point& y)[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 135--135 [] @texttt friend T dist_infty (const basic_point& x, const basic_p oint& y)[] [65] Overfull \hbox (32.18782pt too wide) in paragraph at lines 137--137 [] @texttt max(_my_abs(x[1]-y[1]), _my_abs(x[2]-y[ 2]))); }[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 149--149 []@texttt T mixt (const basic_point& u, const basic_point& v, const basi c_point& w);[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 151--151 []@texttt // robust(exact) floating point predicates: return value as (0, > 0, < 0)[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 160--160 [] @texttt const basic_point& c, const basic_point& x = basic_poi nt());[] ) (../../nfem/basis/tensor.3texi [66] Overfull \hbox (43.6852pt too wide) in paragraph at lines 54--54 [] @texttt friend std::ostream& operator << (std::ostream& out, const t ensor& a);[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 78--78 [] @texttt friend Float dist2 (const tensor& a, const tensor& b) { retu rn norm2(a-b); }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 79--79 [] @texttt friend Float norm (const tensor& a) { return ::sqrt(norm2(a )); }[] [67] Overfull \hbox (72.42863pt too wide) in paragraph at lines 80--80 [] @texttt friend Float dist (const tensor& a, const tensor& b) { retu rn norm(a-b); }[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 89--89 [] @texttt // where q=(q1,q2,q3) are eigenvectors in rows (othonormal m atrix)[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 90--90 [] @texttt // and d=(d1,d2,d3) are eigenvalues, sorted in decreasing order d1 >= d2 >= d3[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 98--98 [] @texttt // where u=(u1,u2,u3) are left pseudo-eigenvectors in rows ( othonormal matrix)[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 99--99 [] @texttt // v=(v1,v2,v3) are right pseudo-eigenvectors in rows (othonormal matrix)[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 100--100 [] @texttt // and s=(s1,s2,s3) are eigenvalues, sorted in decreasing order s1 >= s2 >= s3[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 112--112 []@texttt void cumul_otimes (tensor& t, const point& a, const point& b, size_t na = 3);[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 113--113 []@texttt void cumul_otimes (tensor& t, const point& a, const point& b, size_t na, size_t nb);[] ) (../../skit/lib/ic0.3texi [68]) (../../skit/lib/ssk.3texi [69] [70]) (../../skit/lib/permutation.3texi [71]) (../../skit/lib/vec.3texi [72] Overfull \hbox (135.6642pt too wide) in paragraph at lines 106--106 [] @texttt explicit vec (unsigned int n = 0, const T& init_value = std: :numeric_limits::max())[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 117--117 [] @texttt vec(const VExpr& x) : Array(x.size()) { assign (*this, x); }[] [73] Overfull \hbox (43.6852pt too wide) in paragraph at lines 121--121 [] @texttt { logmodif(*this); return assign (*t his, x); }[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 126--126 []@texttt template std::ostream& operator << (std::ostream&, const v ec&);[] ) (../../skit/lib/diag.3texi [74]) (../../skit/lib/csr.3texi [75] [76]) (../../util/lib/iorheo.3texi [77]) (../../util/lib/rheostream.3texi [78] Overfull \hbox (78.17732pt too wide) in paragraph at lines 133--133 [] @texttt irheostream(const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 135--135 [] @texttt void open (const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 143--143 [] @texttt orheostream(const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 145--145 [] @texttt void open (const std::string& name, const std::string& suffix = std::string());[] [79] Overfull \hbox (49.43388pt too wide) in paragraph at lines 160--160 []@texttt std::string delete_suffix (const std::string& name, const std::strin g& suffix);[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 169--169 []@texttt std::string get_full_name_from_rheo_path (const std::string& rootnam e, const std::string& suffix);[] ) (../../util/lib/Vector.3texi [80] [81] Overfull \hbox (49.43388pt too wide) in paragraph at lines 103--103 [] @texttt void insert (iterator position, const_iterator first, const_iter ator last);[] ) (../../util/lib/catchmark.3texi Overfull \hbox (55.18257pt too wide) in paragraph at lines 26--26 [] @texttt friend std::istream& operator >> (std::istream& is, const ca tchmark& m);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 27--27 [] @texttt friend std::ostream& operator << (std::ostream& os, const ca tchmark& m);[] ) Chapter 6 [82] [83] [84] (../../nfem/lib/riesz_representer.5texi) (../../nfem/lib/newton.5texi [85] Overfull \hbox (118.41814pt too wide) in paragraph at lines 40--40 []@texttt int newton (Problem P, Field& uh, Float& tol, size_t& max_iter, std: :ostream *p_cerr = 0) {[] ) (../../nfem/lib/damped-newton.5texi [86] Overfull \hbox (124.16682pt too wide) in paragraph at lines 41--41 []@texttt int damped_newton (Problem P, Field& u, Real& tol, Size& max_iter, s td::ostream* p_cerr=0) {[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 42--42 [] @texttt return damped_newton(P, newton_identity_preconditioner(), u, tol, max_iter, p_cerr);[] ) (../../skit/lib/pminres.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (89.6747pt too wide) in paragraph at lines 13--13 [] @texttt int pminres (const Matrix &A, Vector &x, const Vector &b, const Preconditioner &M,[] [87] Overfull \hbox (72.42863pt too wide) in paragraph at lines 62--62 []@texttt template [] Overfull \hbox (66.67995pt too wide) in paragraph at lines 63--63 []@texttt int pminres(const Matrix &A, Vector &x, const Vector &Mb, const Prec onditioner &M,[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 64--64 [] @texttt Size &max_iter, Real &tol, std::ostream *p_cerr = 0, std::string l abel = "minres")[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 74--74 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 75--75 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] 0 " << norm_r/norm_b < < std::endl;[] [88] [89] Overfull \hbox (124.16682pt too wide) in paragraph at lines 135--135 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << nor m_r/norm_b << std::endl;[] ) (../../skit/lib/puzawa.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (83.92601pt too wide) in paragraph at lines 13--13 [] @texttt int puzawa (const Matrix &A, Vector &x, const Vector &b, const P reconditioner &M,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14--14 [] @texttt int &max_iter, Real &tol, const Real& rho, std::ostream *p_cer r=0);[] [90] Overfull \hbox (78.17732pt too wide) in paragraph at lines 58--58 []@texttt template < class Matrix, class Vector, class Preconditioner, class R eal, class Size>[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 59--59 []@texttt int puzawa(const Matrix &A, Vector &x, const Vector &Mb, const Preco nditioner &M,[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 67--67 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (193.15108pt too wide) in paragraph at lines 72--72 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << sqrt(norm2_r/norm2_b) << std::endl;[] ) (../../skit/lib/gmres.5texi Overfull \hbox (60.93126pt too wide) in paragraph at lines 14--14 [] @texttt const Preconditioner &M, Matrix &H, Int m, Int &max_iter , Real &tol);[] [91] Overfull \hbox (98.24414pt too wide) in paragraph at lines 91--94 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . [92] [93] [94]) (../../skit/lib/pcg.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14--14 [] @texttt const Preconditioner &M, int &max_iter, Real &tol, std::ostrea m *p_cerr=0);[] [95] Overfull \hbox (98.24414pt too wide) in paragraph at lines 66--70 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . Overfull \hbox (78.17732pt too wide) in paragraph at lines 75--75 []@texttt template < class Matrix, class Vector, class Preconditioner, class R eal, class Size>[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 76--76 []@texttt int pcg(const Matrix &A, Vector &x, const Vector &Mb, const Precondi tioner &M,[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 77--77 [] @texttt Size &max_iter, Real &tol, std::ostream *p_cerr = 0, std::st ring label = "cg")[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 84--84 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (204.64845pt too wide) in paragraph at lines 90--90 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << ::sqrt(norm2_r/norm2_b) << std::endl;[] ) (../../skit/lib/qmr.5texi [96] Overfull \hbox (98.24414pt too wide) in paragraph at lines 75--78 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . ) (../../skit/lib/bicgstab.5texi [97] Overfull \hbox (98.24414pt too wide) in paragraph at lines 58--61 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . ) (../../skit/lib/mixed_solver.5texi Overfull \hbox (175.90501pt too wide) in paragraph at lines 20--20 [] @texttt template [] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21--21 [] @texttt int pcg_abtb (const Matrix& A, const Matrix& B, Vector& u, Vecto r& p,[] [98] Overfull \hbox (175.90501pt too wide) in paragraph at lines 26--26 [] @texttt template [] Overfull \hbox (118.41814pt too wide) in paragraph at lines 27--27 [] @texttt int pcg_abtbc (const Matrix& A, const Matrix& B, const Matrix& C , Vector& u, Vector& p,[] ) Chapter 7 [99] [100] (../../nfem/form_element/d_dx.7texi) (../../nfem/form_element/2W.7texi [101]) (../../nfem/form_element/2D.7texi) (../../nfem/form_element/convect.7texi) (../../nfem/form_element/div_div.7texi [102]) (../../nfem/form_element/inv_mass.7texi [103]) (../../nfem/form_element/mass.7texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 24--24 [] @texttt form (const space& V, const space& V, "mass", const domain& gamma);[] [104]) (../../nfem/form_element/div.7texi [105]) (../../nfem/form_element/d_ds.7texi) (../../nfem/form_element/curl.7texi [106]) (../../nfem/form_element/d2_ds2.7texi) (../../nfem/form_element/grad.7texi [107]) (../../nfem/form_element/grad_grad.7texi) (../../nfem/form_element/2D_D.7texi [108]) Chapter 8 [109] [110] (../../nfem/lib/form_element.9texi Overfull \hbox (118.41814pt too wide) in paragraph at lines 52--52 [] @texttt // for special forms for which coordinate-system specific w eights (ie, cylindrical[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 58--58 [] @texttt void operator() (const geo_element& K, ublas::matrix& m) const;[] ) (../../nfem/lib/iofem.9texi [111] Overfull \hbox (141.74222pt too wide) in paragraph at lines 24--24 [] @texttt cout << cut << origin(point(0.5, 0.5, 0.5)) << normal(po int(1,1,0) << uh;[] ) (../../nfem/lib/geomap.9texi [112] Overfull \hbox (66.67995pt too wide) in paragraph at lines 37--37 [] @texttt // Maps a quadrature-dependent lattice over Th_1 onto Th_2 triangulation.[] Overfull \hbox (221.89452pt too wide) in paragraph at lines 39--39 [] @texttt std::string quadrature="default", size_t ord er=0, bool allow_approximate_edges=true);[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 41--41 [] @texttt // Maps a quadrature-dependent lattice over Th_1 onto Th_2 triangulation[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 43--43 [] @texttt geomap (const geo& Th_2, const geo& Th_1, const field& advec tion_h_1,[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 44--44 [] @texttt std::string quadrature="default", size_t ord er=0) ;[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 47--47 [] @texttt // Maps space Vh_1 dof's onto the meshpoints of Th_2 triang ulation[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 52--52 [] @texttt // Same but for P1d, using points inside the triangle to pr eserve discontinuity[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 57--57 [] @texttt // Maps space Vh_1 dof's onto the meshpoints of Th_2 triang ulation[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 61--61 [] @texttt geomap (const geo& Th_2, const space& Vh_1, const field& adv ection_h_1);[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 63--63 [] @texttt // Does the same, but assumes that Th_2 is the triangulatio n for Vh_1[] Overfull \hbox (273.6327pt too wide) in paragraph at lines 64--64 [] @texttt geomap (const space& Vh_2, const field& advection_h_1, const geomap_option_type& opts = geomap_option_type());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 72--72 [] @texttt { if (!use_space) error_macro("Lattice-based geomaps use no space");[] [113] Overfull \hbox (89.6747pt too wide) in paragraph at lines 100--100 [] @texttt bool no_barycentric_weight() const { return _barycentric_wei ght == Float(0); }[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 110--110 [] @texttt meshpoint robust_advect_1 (const point& x0, const point& va, bool& is_inside) const;[] Overfull \hbox (279.3814pt too wide) in paragraph at lines 111--111 [] @texttt meshpoint robust_advect_N (const point& x0, const point& v0, const field& vh, size_t n, bool& is_inside) const;[] [114] Overfull \hbox (37.93651pt too wide) in paragraph at lines 138--138 []@texttt geomap::geomap (const geo& Th_2, const space& Vh_1, const field& adv ection) :[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 139--139 [] @texttt _Th_1 (Vh_1.get_geo()), _Th_2 (Th_2), _advection(advection), advected(true),[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 146--146 []@texttt geomap::geomap (const space& Vh_1, const field& advection, const geo map_option_type& opt) :[] Overfull \hbox (135.6642pt too wide) in paragraph at lines 147--147 [] @texttt _Th_1 (Vh_1.get_geo()), _Th_2 (Vh_1.get_geo()), _advection(a dvection), advected(true),[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 175--175 [] @texttt error_macro("The advection field should be defined on the or iginal mesh Th_1="[] [115] Overfull \hbox (20.69044pt too wide) in paragraph at lines 176--176 [] @texttt << Th_1.name() << " and not " << _advection.get_geo().na me());[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 204--204 []@texttt /* f being a field of space V, X a geomap on this space, foX=compos e(f,X) is their[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 211--211 []@texttt field compose (const field& f, const geomap& g, Float (*f_outside)(c onst point&));[] [116]) (../../nfem/lib/characteristic.9texi [117] Overfull \hbox (14.94176pt too wide) in paragraph at lines 57--57 [] @texttt field_o_characteristic(const field& fh, const characteristic & X);[] ) (../../nfem/basis/geo_element.9texi [118] [119] Overfull \hbox (89.6747pt too wide) in paragraph at lines 76--76 [] @texttt void build_subgeo(size_type subgeo_dim, size_type i_subgeo, geo_ element& S) const;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 98--98 [] @texttt friend std::ostream& operator << (std::ostream&, const geo_eleme nt&);[] ) (../../nfem/basis/prism.9texi [120] [121]) (../../nfem/basis/edge.9texi) (../../nfem/basis/tetra.9texi [122]) (../../nfem/basis/quadrature.9texi [123] Overfull \hbox (20.69044pt too wide) in paragraph at lines 68--68 [] @texttt mutable quadrature_on_geo _quad [reference_element::max_ size];[] ) (../../nfem/basis/reference_element.9texi [124] [125] Overfull \hbox (20.69044pt too wide) in paragraph at lines 81--81 [] @texttt size_type subgeo_size(size_type subgeo_dim, size_type i_subgeo) const;[] Overfull \hbox (221.89452pt too wide) in paragraph at lines 82--82 [] @texttt size_type subgeo_local_vertex(size_type subgeo_dim, size_type i_ subgeo, size_type i_subgeo_vertex) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 104--104 [] @texttt static const size_type _subgeo_size [max_size*4*max_n_su bgeo];[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 105--105 [] @texttt static const size_type _subgeo_local_vertex [max_size*4*max_n_su bgeo*max_subgeo_vertex];[] ) (../../nfem/basis/numbering.9texi [126] [127]) (../../nfem/basis/triangle.9texi) (../../nfem/basis/point.9texi [128]) (../../nfem/basis/basis.9texi Overfull \hbox (233.39189pt too wide) in paragraph at lines 49--49 [] @texttt size_type size (reference_element hat_K, dof_family_type famil y=reference_element::dof_family_max) const;[] [129]) (../../nfem/basis/hexa.9texi [130] [131]) (../../nfem/basis/quadrangle.9texi) (../../util/lib/heap_allocator.9texi [132] Overfull \hbox (147.16158pt too wide) in paragraph at lines 20--20 [] @texttt typedef map , heap_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24--24 [] @texttt for (map_type::iterator iter = a.begin(), last = a.end(); iter ! = last; iter++) {[] [133] Overfull \hbox (14.94176pt too wide) in paragraph at lines 60--60 [] @texttt : handler ((typename heap_allocator::handler_type*)(ha.hand ler))[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 88--88 [] @texttt size_type max_size() const { return std::numeric_limits::max() / sizeof(T); }[] [134]) (../../util/lib/pretty_name.9texi Overfull \hbox (135.6642pt too wide) in paragraph at lines 16--16 [] @texttt typedef map , heap_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24--24 []@texttt /// @brief get string from a type, with an optional pretty-printing for complex types[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 29--29 []@texttt template std::string typename_of (T x) { return typename_macro(T); }[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 30--30 []@texttt template std::string pretty_typename_of (T x) { return pre tty_typename_macro(T); }[] ) (../../util/lib/smart_pointer.9texi [135] [136]) (../../util/lib/stack_allocator.9texi Overfull \hbox (35.10944pt too wide) in paragraph at lines 16--19 @textrm ex-cep-tion is em-mited. For a non-limited mem-ory han-dler in the same spirit, see @texttt "@textrm heap[]allocator@texttt "@textrm (9). Overfull \hbox (72.42863pt too wide) in paragraph at lines 24--24 [] @texttt stack_allocator stack_alloc (stack.begin().operator->(), stack.size());[] Overfull \hbox (152.91026pt too wide) in paragraph at lines 25--25 [] @texttt typedef map , stack_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 29--29 [] @texttt for (map_type::iterator iter = a.begin(), last = a.end(); iter ! = last; iter++) {[] [137] Overfull \hbox (20.69044pt too wide) in paragraph at lines 70--70 [] @texttt : handler ((typename stack_allocator::handler_type*)(sa.han dler))[] [138] Overfull \hbox (129.91551pt too wide) in paragraph at lines 99--99 [] @texttt size_type max_size() const { return std::numeric_limits::max() / sizeof(T); }[] [139] Overfull \hbox (43.6852pt too wide) in paragraph at lines 161--161 [] @texttt warning_macro ("stack_allocator::mem_info cstori: size="<< max_size);[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 165--165 [] @texttt warning_macro ("stack_allocator::mem_info dstor: size="<& lhs, const stack_allocat or& rhs) throw()[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 178--178 []@texttt bool operator!=( const stack_allocator& lhs, const stack_allocat or& rhs) throw()[] ) (../../config/acinclude.9texi [140] Overfull \hbox (17.42508pt too wide) in paragraph at lines 107--118 []@textrm Check to see if spooles li-brary and head-ers ex-ists. If so, set the shell vari-able @texttt "@textrm rheo[]have[]spooles@texttt " Overfull \hbox (24.59909pt too wide) in paragraph at lines 107--118 @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]SPOOLES and su b-stitues IN-CLUDES[]SPOOLES and LADD[]SPOOLES [141] Overfull \hbox (29.95679pt too wide) in paragraph at lines 122--133 []@textrm Check to see if umf-pack li-brary and head-ers ex-ists. If so, set th e shell vari-able @texttt "@textrm rheo[]have[]umfpack@texttt " Overfull \hbox (40.56772pt too wide) in paragraph at lines 122--133 @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]UMFPACK and su b-stitues IN-CLUDES[]UMFPACK and LADD[]UMFPACK Overfull \hbox (33.95523pt too wide) in paragraph at lines 137--148 @textrm ex-ists. If so, set the shell vari-able @texttt rheo_have_malloc_dbg[] @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]MALLOC[]DBG, Overfull \hbox (37.5711pt too wide) in paragraph at lines 155--160 []@textrm Check whether the dmal-loc pack-age ex-ists and set the cor-re-spond- ing shell value @texttt "@textrm rheo[]have[]dmalloc@texttt " Overfull \hbox (10.89465pt too wide) in paragraph at lines 155--160 @textrm and HAVE[]DMALLOC (in Make-file.am and con-fig.h) ac-cord-ingly, cre-at e LDADD[]DMALLOC [142] [143] [144] Overfull \hbox (18.00768pt too wide) in paragraph at lines 372--377 []@textrm Check wheter we are us-ing CRAY C@texttt ++ @textrm com-piler. If so, set the shell vari-able @texttt "@textrm ac[]cv[]prog[]cray[]cc@texttt " Overfull \hbox (5.96268pt too wide) in paragraph at lines 380--386 []@textrm Check wheter we are us-ing DEC C@texttt ++ @textrm com-piler. If so, set the shell vari-able @texttt "@textrm ac[]cv[]prog[]dec[]cc@texttt " Overfull \hbox (83.07622pt too wide) in paragraph at lines 398--406 []@textrm If so, sub-stitue REC-OG-NIZED[]CXX to a spe-cific com-piler's rule f ile, e.g, @texttt "@textrm $@texttt {@textrm top[]srcdir@texttt }@textrm /confi g/gnu[]cxx.mk@texttt "@textrm , [145])) (./FAQ.texi Chapter 9 [146] Overfull \hbox (10.36597pt too wide) in paragraph at lines 77--82 []@textrm the au-to-mat-i-cally gen-er-ated script, scan the ma-chine and tran s-late `@texttt config.h.in[]@textrm '[], [147] [148]) (./gpl.texi Appendix @char @appendixno [149] [150] Underfull \hbox (badness 2368) in paragraph at lines 63--63 []@secrm TERMS AND CON-DI-TIONS FOR COPY-ING, [151] [152] [153] [154] [155] [156]) (Concept Index) [157] [158] (./rheolef.cps [159]) (Program Index) [160] (./rheolef.pgs) (Class Index) [161] [162] (./rheolef.cls) (Form Index) [163] [164] (./rheolef.bfs) (Approximation Index) [165] [166] (./rheolef.aps) (Function Index) [167] [168] (./rheolef.fns) (File Format Index) [169] [170] (./rheolef.fis) (Related Tool Index) [171] [172] (./rheolef.tos [173]) [174] (./rheolef.toc) [-1] [-2] (./rheolef.toc [-3] [-4] [-5]) [-6] ) (see the transcript file for additional information) Output written on rheolef.dvi (182 pages, 453528 bytes). Transcript written on rheolef.log. This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (././rheolef.texi (./texinfo.tex Loading texinfo [version 1999-03-26.17]: Basics, fonts, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, localization, and turning on texinfo input format.) (./rheolef.aux) (./myversion.texi) [1] [2] Chapter 1 (./introduction.texi) (./INSTALL.texi Chapter 2 [1] [2] Overfull \hbox (55.18257pt too wide) in paragraph at lines 60--60 [] @texttt firefox http://ljk.imag.fr/membres/Pierre.Saramito/rheolef/ rheolef.html[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 76--76 [] @texttt firefox http://ljk.imag.fr/membres/Pierre.Saramito/rheolef/ source_html/[] [3] [4] Overfull \hbox (49.43388pt too wide) in paragraph at lines 259--259 [] @texttt ./configure --with-taucs-ldadd='-ltaucs -llapack -lblas -lm etis -lg2c'[] [5] [6] Overfull \hbox (1.0965pt too wide) in paragraph at lines 443--445 []@textrm Set the home di-rec-tory for the @texttt cln[] @textrm li-brary. De- fault @textsl dir[]cln @textrm is `@texttt /usr/local/math[]@textrm '[]. [7] Overfull \hbox (31.82034pt too wide) in paragraph at lines 500--506 @textsl dir[]parmetis @textrm for @texttt libparmetis.so[]@textrm , @texttt li bparmetis.a[] @textrm and also @texttt libmetis.a[] libmetis.so[]@textrm . Overfull \hbox (83.97032pt too wide) in paragraph at lines 529--537 @texttt libumfpack.a[] @textrm and for header @textsl in-cdir[]umfpack@textrm /umfpack.h or @textsl in-cdir[]umfpack@textrm /umfpack/umfpack.h. [8] Overfull \hbox (0.94188pt too wide) in paragraph at lines 607--610 @textrm The user's man-ual goes into `@texttt doc/usrman/[]@textrm '[] and the the ref-er-ence man-ual into `@texttt doc/refman/[]@textrm '[]. [9] [10] Overfull \hbox (61.22774pt too wide) in paragraph at lines 782--786 $@textsy ^^O$ @textrm For par-tic-i-pat-ing to the rhe-olef con-cur-rent de-vel -op-ment, please con-tact also @texttt Pierre.Saramito@imag.fr[] ) Chapter 3 [11] [12] (./includes.texi Chapter 4 [13] [14] (../../nfem/bin/cemagref2field.1texi) (../../nfem/bin/bamg2geo.1texi [15] [16]) (../../nfem/bin/geo.1texi [17] [18] [19] Overfull \hbox (141.74222pt too wide) in paragraph at lines 293--293 [] @texttt geo -input-grummp -geo -upgrade -noverbose - < hex-multi. g > hex-multi.geo[] [20] Overfull \hbox (26.76846pt too wide) in paragraph at lines 332--332 [] @texttt geo -input-grummp -upgrade -geo - > multi-domain.geo[] [21] [22]) (../../nfem/bin/mesh2geo.1texi) (../../nfem/bin/mfield.1texi [23] [24] [25]) (../../nfem/bin/tetgen2geo.1texi [26]) (../../nfem/bin/branch.1texi [27] [28]) (../../nfem/bin/field.1texi [29] Overfull \hbox (26.43913pt too wide) in paragraph at lines 116--116 [] @texttt field -input-cemagref -field - < mytopo.cemagref > mytop o.field[] [30] [31] [32] Overfull \hbox (66.67995pt too wide) in paragraph at lines 298--298 [] @texttt field cube.field -cut -normal 0 1 0 -origin 0.5 0.5 0.5 -text > cube-cut.field[] ) (../../nfem/bin/space.1texi [33]) (../../nfem/bin/mkgeo_grid.1texi [34]) (../../nfem/bin/qmg2geo.1texi [35]) (../../nfem/bin/cad.1texi [36] [37]) (../../nfem/bin/grummp2geo.1texi) (../../nfem/bin/msh2geo.1texi) (../../config/rheolef-config.1texi [38] [39]) Chapter 5 [40] (../../nfem/lib/field.3texi) (../../nfem/lib/cad.3texi [41] Overfull \hbox (124.16682pt too wide) in paragraph at lines 57--57 [] @texttt void eval (const cad_element& S, const point& ref_coord, po int & real_coord) const;[] [42] Overfull \hbox (20.69044pt too wide) in paragraph at lines 63--63 [] @texttt friend std::ostream& operator << (std::ostream& os, const ca d& x);[] ) (../../nfem/lib/form.3texi Overfull \hbox (95.42339pt too wide) in paragraph at lines 51--51 [] @texttt form (const space& X, const space& Y, const std::string& op_name , const domain& d);[] [43] Overfull \hbox (72.42863pt too wide) in paragraph at lines 52--52 [] @texttt // Currently weighted forms in P2 spaces use a quadrature f ormula which is[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 54--54 [] @texttt form (const space& X, const space& Y, const std::string& op_name , const field& wh,[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 57--57 [] @texttt const domain& d, const field& wh, bool use_coordinate_system _weight=true);[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 68--68 [] @texttt bool for_locked_boundaries() const { return _for_locked_boundari es; }[] [44]) (../../nfem/lib/form_manip.3texi [45]) (../../nfem/lib/trace.3texi [46]) (../../nfem/lib/form_diag.3texi Overfull \hbox (37.93651pt too wide) in paragraph at lines 45--45 [] @texttt friend class field operator * (const form_diag& a, const class f ield& x);[] [47] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [] @texttt friend form_diag operator / (const Float& lambda, const form_dia g& m);[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 56--56 [] @texttt friend std::ostream& operator << (std::ostream& s, const form_di ag& a);[] ) (../../nfem/lib/form_diag_manip.3texi [48] Overfull \hbox (26.43913pt too wide) in paragraph at lines 48--48 [] @texttt form_diag_manip& operator<< (form_diag_manip& (*pf)(form_diag_ma nip&));[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 53--53 [] @texttt friend form_diag_manip& operator << (form_diag_manip &fm, const class sized& s);[] ) (../../nfem/lib/branch.3texi [49] Overfull \hbox (43.6852pt too wide) in paragraph at lines 47--47 [] @texttt branch (const std::string& parameter_name, const std::string & u_name);[] Overfull \hbox (198.89977pt too wide) in paragraph at lines 48--48 [] @texttt branch (const std::string& parameter_name, const std::string & u_name, const std::string& p_name);[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 73--73 [] @texttt __obranch operator() (const Float& t, const field& u, const field& p);[] ) (../../nfem/lib/space.3texi [50] [51] Overfull \hbox (141.41289pt too wide) in paragraph at lines 147--147 [] @texttt space (const geo& g, const std::string& approx_name, const std:: string& valued = "scalar");[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 149--149 [] @texttt const domain& interface, const domain& subgeo, const std::st ring& valued = "scalar");[] Overfull \hbox (147.16158pt too wide) in paragraph at lines 150--150 [] @texttt // For spaces with a discontinuity through domain `interfac e', but otherwise continuous[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 151--151 [] @texttt space (const geo& g, const domain& d, const std::string& approx_ name);[] [52] Overfull \hbox (83.92601pt too wide) in paragraph at lines 173--173 [] @texttt void set_periodic (const std::string& d1_name, const std::string & d2_name) const;[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 175--175 [] @texttt void lock_components (const std::string& d_name, point locked_di r) const;[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 177--177 [] @texttt void lock_components (const std::string& d_name, Function locked _dir) const;[] Overfull \hbox (164.40764pt too wide) in paragraph at lines 181--181 [] @texttt *! Current limitation: only 2D vector fields with component s having same FE approximation.[] Overfull \hbox (135.6642pt too wide) in paragraph at lines 182--182 [] @texttt *! The space has a dof for the direction normal to locked_d ir, while the value in the[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 184--184 [] @texttt *! The field::at function implements the reconstruction of the original cartesian components.[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 201--201 [] @texttt const basis& get_basis (size_type i_component = 0) const;[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 202--202 [] @texttt const numbering& get_numbering (size_type i_component = 0) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 203--203 [] @texttt std::string get_approx(size_type i_component = 0) const;[] [53] Overfull \hbox (101.17207pt too wide) in paragraph at lines 226--226 [] @texttt // for (2D) vector spaces only, field is only bloc ked along locked_dir[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 232--232 [] @texttt Float locked_component (size_type dof, size_type i_comp) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 234--234 [] @texttt Float unlocked_component (size_type dof, size_type i_comp) const;[] Overfull \hbox (221.89452pt too wide) in paragraph at lines 251--251 [] @texttt // "global" variants differ only for boundary spaces (n on-global uses domain-indices, global use[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 253--253 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx) const;[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 254--254 [] @texttt void set_global_dof (const geo_element& K, tiny_vector& idx) const;[] [54] Overfull \hbox (175.90501pt too wide) in paragraph at lines 255--255 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx, size_type i_comp) const;[] Overfull \hbox (175.90501pt too wide) in paragraph at lines 256--256 [] @texttt void set_global_dof (const geo_element& K, tiny_vector& idx, size_type i_comp) const;[] Overfull \hbox (423.09859pt too wide) in paragraph at lines 257--257 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx, size_type i_comp, reference_element::dof_family_type family) const;[] Overfull \hbox (239.14058pt too wide) in paragraph at lines 259--259 [] @texttt // Hermite/Argyris: returns 1 if the global dof contains the d erivative along outward normal of K, -1 else[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 260--260 [] @texttt void dof_orientation(const geo_element& K, tiny_vector& or ientation) const;[] ) (../../nfem/lib/geo.3texi [55] Overfull \hbox (60.93126pt too wide) in paragraph at lines 90--90 [] @texttt for (geo::const_iterator_vertex i = g.begin_vertex(); i != g.end_n ode(); i++) {[] [56] Overfull \hbox (72.42863pt too wide) in paragraph at lines 102--102 [] @texttt for (geo::const_iterator_domain i = g.begin_domain(); i != i.end_d omain(); i++) {[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 126--126 [] @texttt void write_gnuplot_postscript_options (std::ostream& plot, const p lot_options& opt) const;[] Overfull \hbox (106.92076pt too wide) in paragraph at lines 144--144 [] @texttt explicit geo (const std::string& filename, const std::string& coor d_sys = "cartesian");[] [57] Overfull \hbox (20.69044pt too wide) in paragraph at lines 191--191 [] @texttt void build_subregion(const domain& start_from, const domain& dont_ cross,[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 193--193 [] @texttt // Builds a new domain on the side of domain `dont_cross' on whic h `start_from'[] [58] Overfull \hbox (112.66945pt too wide) in paragraph at lines 230--230 [] @texttt void localize_nearest (const point& x, point& y, geo_element::size _type& element) const;[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 231--231 [] @texttt bool trace (const point& x0, const point& v, point& x, Float& t, s ize_type& element) const;[] [59] Overfull \hbox (37.93651pt too wide) in paragraph at lines 249--249 [] @texttt normal (const class space& Nh, const domain& d, const interface& b c) const;[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 254--254 [] @texttt tangent (const class space& Nh, const domain& d, const interface& bc) const;[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 259--259 [] @texttt tangent_spline (const space& Nh, const domain& d, const interface& bc) const;[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 268--268 [] @texttt // Gives curvature of d in the (x,y) or (r,z) plane based on a s pline interpolation.[] Overfull \hbox (152.91026pt too wide) in paragraph at lines 272--272 [] @texttt // Gives curvature of d in the (x,y) or (r,z) plane based on a l ocal quadratic interpolation.[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 281--281 [] @texttt // Can also initialize orientation of domain through `bc' data s tructure.[] [60] Overfull \hbox (37.93651pt too wide) in paragraph at lines 305--305 [] @texttt void set_coordinate_system (const std::string&); // "cartesian", " rz", "zr"[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 307--307 [] @texttt void label_interface(const domain& dom1, const domain& dom2, const std::string& name);[] Overfull \hbox (112.66945pt too wide) in paragraph at lines 315--315 [] @texttt void init_localizer (const domain& boundary, Float tolerance=-1, i nt list_size=0) const;[] [61]) (../../nfem/lib/domain.3texi Overfull \hbox (106.92076pt too wide) in paragraph at lines 47--47 [] @texttt void set(IteratorElement p, size_type n, size_type dim, cons t std::string& name);[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 51--51 [] @texttt friend std::ostream& operator << (std::ostream& s, const domai n& d);[] [62] Overfull \hbox (89.6747pt too wide) in paragraph at lines 53--53 [] @texttt std::ostream& put_vtk (std::ostream& vtk, Vector::const _iterator first_p,[] ) (../../nfem/basis/point.3texi Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [] @texttt explicit basic_point () { _x[0] = T(); _x[1] = T(); _x[2] = T(); }[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 39--39 [] @texttt { _x[0] = p._x[0]; _x[1] = p._x[1]; _x[2] = p._x[2]; return *this; }[] [63] Overfull \hbox (14.94176pt too wide) in paragraph at lines 43--43 [] @texttt T& operator[](int i_coord) { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 44--44 [] @texttt const T& operator[](int i_coord) const { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 45--45 [] @texttt T& operator()(int i_coord) { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 46--46 [] @texttt const T& operator()(int i_coord) const { return _x[i_coord% 3]; }[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 75--75 [] @texttt friend bool operator == (const basic_point& u, const basi c_point& v)[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 79--79 [] @texttt { _x[0] += v[0]; _x[1] += v[1]; _x[2] += v[2]; retur n *this; }[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 82--82 [] @texttt { _x[0] -= v[0]; _x[1] -= v[1]; _x[2] -= v[2]; retur n *this; }[] [64] Overfull \hbox (112.66945pt too wide) in paragraph at lines 90--90 [] @texttt friend basic_point operator+ (const basic_point& u, co nst basic_point& v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 91--91 [] @texttt { return basic_point (u[0]+v[0], u[1]+v[1], u[2]+ v[2]); }[] Overfull \hbox (112.66945pt too wide) in paragraph at lines 96--96 [] @texttt friend basic_point operator- (const basic_point& u, co nst basic_point& v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 97--97 [] @texttt { return basic_point (u[0]-v[0], u[1]-v[1], u[2]- v[2]); }[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 100--100 [] @texttt friend basic_point operator* (const T1& a, const basic_po int& u)[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 106--106 [] @texttt friend basic_point operator/ (const basic_point& u, co nst T& a)[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 109--109 [] @texttt friend basic_point operator/ (const basic_point& u, ba sic_point v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 110--110 [] @texttt { return basic_point (u[0]/v[0], u[1]/v[1], u[2]/ v[2]); }[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 112--112 [] @texttt friend basic_point vect (const basic_point& v, const b asic_point& w)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 129--129 [] @texttt friend T dist2 (const basic_point& x, const basic_point< T>& y)[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 132--132 [] @texttt friend T dist (const basic_point& x, const basic_point& y)[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 135--135 [] @texttt friend T dist_infty (const basic_point& x, const basic_p oint& y)[] [65] Overfull \hbox (32.18782pt too wide) in paragraph at lines 137--137 [] @texttt max(_my_abs(x[1]-y[1]), _my_abs(x[2]-y[ 2]))); }[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 149--149 []@texttt T mixt (const basic_point& u, const basic_point& v, const basi c_point& w);[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 151--151 []@texttt // robust(exact) floating point predicates: return value as (0, > 0, < 0)[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 160--160 [] @texttt const basic_point& c, const basic_point& x = basic_poi nt());[] ) (../../nfem/basis/tensor.3texi [66] Overfull \hbox (43.6852pt too wide) in paragraph at lines 54--54 [] @texttt friend std::ostream& operator << (std::ostream& out, const t ensor& a);[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 78--78 [] @texttt friend Float dist2 (const tensor& a, const tensor& b) { retu rn norm2(a-b); }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 79--79 [] @texttt friend Float norm (const tensor& a) { return ::sqrt(norm2(a )); }[] [67] Overfull \hbox (72.42863pt too wide) in paragraph at lines 80--80 [] @texttt friend Float dist (const tensor& a, const tensor& b) { retu rn norm(a-b); }[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 89--89 [] @texttt // where q=(q1,q2,q3) are eigenvectors in rows (othonormal m atrix)[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 90--90 [] @texttt // and d=(d1,d2,d3) are eigenvalues, sorted in decreasing order d1 >= d2 >= d3[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 98--98 [] @texttt // where u=(u1,u2,u3) are left pseudo-eigenvectors in rows ( othonormal matrix)[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 99--99 [] @texttt // v=(v1,v2,v3) are right pseudo-eigenvectors in rows (othonormal matrix)[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 100--100 [] @texttt // and s=(s1,s2,s3) are eigenvalues, sorted in decreasing order s1 >= s2 >= s3[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 112--112 []@texttt void cumul_otimes (tensor& t, const point& a, const point& b, size_t na = 3);[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 113--113 []@texttt void cumul_otimes (tensor& t, const point& a, const point& b, size_t na, size_t nb);[] ) (../../skit/lib/ic0.3texi [68]) (../../skit/lib/ssk.3texi [69] [70]) (../../skit/lib/permutation.3texi [71]) (../../skit/lib/vec.3texi [72] Overfull \hbox (135.6642pt too wide) in paragraph at lines 106--106 [] @texttt explicit vec (unsigned int n = 0, const T& init_value = std: :numeric_limits::max())[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 117--117 [] @texttt vec(const VExpr& x) : Array(x.size()) { assign (*this, x); }[] [73] Overfull \hbox (43.6852pt too wide) in paragraph at lines 121--121 [] @texttt { logmodif(*this); return assign (*t his, x); }[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 126--126 []@texttt template std::ostream& operator << (std::ostream&, const v ec&);[] ) (../../skit/lib/diag.3texi [74]) (../../skit/lib/csr.3texi [75] [76]) (../../util/lib/iorheo.3texi [77]) (../../util/lib/rheostream.3texi [78] Overfull \hbox (78.17732pt too wide) in paragraph at lines 133--133 [] @texttt irheostream(const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 135--135 [] @texttt void open (const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 143--143 [] @texttt orheostream(const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 145--145 [] @texttt void open (const std::string& name, const std::string& suffix = std::string());[] [79] Overfull \hbox (49.43388pt too wide) in paragraph at lines 160--160 []@texttt std::string delete_suffix (const std::string& name, const std::strin g& suffix);[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 169--169 []@texttt std::string get_full_name_from_rheo_path (const std::string& rootnam e, const std::string& suffix);[] ) (../../util/lib/Vector.3texi [80] [81] Overfull \hbox (49.43388pt too wide) in paragraph at lines 103--103 [] @texttt void insert (iterator position, const_iterator first, const_iter ator last);[] ) (../../util/lib/catchmark.3texi Overfull \hbox (55.18257pt too wide) in paragraph at lines 26--26 [] @texttt friend std::istream& operator >> (std::istream& is, const ca tchmark& m);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 27--27 [] @texttt friend std::ostream& operator << (std::ostream& os, const ca tchmark& m);[] ) Chapter 6 [82] [83] [84] (../../nfem/lib/riesz_representer.5texi) (../../nfem/lib/newton.5texi [85] Overfull \hbox (118.41814pt too wide) in paragraph at lines 40--40 []@texttt int newton (Problem P, Field& uh, Float& tol, size_t& max_iter, std: :ostream *p_cerr = 0) {[] ) (../../nfem/lib/damped-newton.5texi [86] Overfull \hbox (124.16682pt too wide) in paragraph at lines 41--41 []@texttt int damped_newton (Problem P, Field& u, Real& tol, Size& max_iter, s td::ostream* p_cerr=0) {[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 42--42 [] @texttt return damped_newton(P, newton_identity_preconditioner(), u, tol, max_iter, p_cerr);[] ) (../../skit/lib/pminres.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (89.6747pt too wide) in paragraph at lines 13--13 [] @texttt int pminres (const Matrix &A, Vector &x, const Vector &b, const Preconditioner &M,[] [87] Overfull \hbox (72.42863pt too wide) in paragraph at lines 62--62 []@texttt template [] Overfull \hbox (66.67995pt too wide) in paragraph at lines 63--63 []@texttt int pminres(const Matrix &A, Vector &x, const Vector &Mb, const Prec onditioner &M,[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 64--64 [] @texttt Size &max_iter, Real &tol, std::ostream *p_cerr = 0, std::string l abel = "minres")[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 74--74 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 75--75 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] 0 " << norm_r/norm_b < < std::endl;[] [88] [89] Overfull \hbox (124.16682pt too wide) in paragraph at lines 135--135 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << nor m_r/norm_b << std::endl;[] ) (../../skit/lib/puzawa.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (83.92601pt too wide) in paragraph at lines 13--13 [] @texttt int puzawa (const Matrix &A, Vector &x, const Vector &b, const P reconditioner &M,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14--14 [] @texttt int &max_iter, Real &tol, const Real& rho, std::ostream *p_cer r=0);[] [90] Overfull \hbox (78.17732pt too wide) in paragraph at lines 58--58 []@texttt template < class Matrix, class Vector, class Preconditioner, class R eal, class Size>[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 59--59 []@texttt int puzawa(const Matrix &A, Vector &x, const Vector &Mb, const Preco nditioner &M,[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 67--67 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (193.15108pt too wide) in paragraph at lines 72--72 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << sqrt(norm2_r/norm2_b) << std::endl;[] ) (../../skit/lib/gmres.5texi Overfull \hbox (60.93126pt too wide) in paragraph at lines 14--14 [] @texttt const Preconditioner &M, Matrix &H, Int m, Int &max_iter , Real &tol);[] [91] Overfull \hbox (98.24414pt too wide) in paragraph at lines 91--94 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . [92] [93] [94]) (../../skit/lib/pcg.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14--14 [] @texttt const Preconditioner &M, int &max_iter, Real &tol, std::ostrea m *p_cerr=0);[] [95] Overfull \hbox (98.24414pt too wide) in paragraph at lines 66--70 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . Overfull \hbox (78.17732pt too wide) in paragraph at lines 75--75 []@texttt template < class Matrix, class Vector, class Preconditioner, class R eal, class Size>[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 76--76 []@texttt int pcg(const Matrix &A, Vector &x, const Vector &Mb, const Precondi tioner &M,[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 77--77 [] @texttt Size &max_iter, Real &tol, std::ostream *p_cerr = 0, std::st ring label = "cg")[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 84--84 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (204.64845pt too wide) in paragraph at lines 90--90 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << ::sqrt(norm2_r/norm2_b) << std::endl;[] ) (../../skit/lib/qmr.5texi [96] Overfull \hbox (98.24414pt too wide) in paragraph at lines 75--78 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . ) (../../skit/lib/bicgstab.5texi [97] Overfull \hbox (98.24414pt too wide) in paragraph at lines 58--61 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . ) (../../skit/lib/mixed_solver.5texi Overfull \hbox (175.90501pt too wide) in paragraph at lines 20--20 [] @texttt template [] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21--21 [] @texttt int pcg_abtb (const Matrix& A, const Matrix& B, Vector& u, Vecto r& p,[] [98] Overfull \hbox (175.90501pt too wide) in paragraph at lines 26--26 [] @texttt template [] Overfull \hbox (118.41814pt too wide) in paragraph at lines 27--27 [] @texttt int pcg_abtbc (const Matrix& A, const Matrix& B, const Matrix& C , Vector& u, Vector& p,[] ) Chapter 7 [99] [100] (../../nfem/form_element/d_dx.7texi) (../../nfem/form_element/2W.7texi [101]) (../../nfem/form_element/2D.7texi) (../../nfem/form_element/convect.7texi) (../../nfem/form_element/div_div.7texi [102]) (../../nfem/form_element/inv_mass.7texi [103]) (../../nfem/form_element/mass.7texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 24--24 [] @texttt form (const space& V, const space& V, "mass", const domain& gamma);[] [104]) (../../nfem/form_element/div.7texi [105]) (../../nfem/form_element/d_ds.7texi) (../../nfem/form_element/curl.7texi [106]) (../../nfem/form_element/d2_ds2.7texi) (../../nfem/form_element/grad.7texi [107]) (../../nfem/form_element/grad_grad.7texi) (../../nfem/form_element/2D_D.7texi [108]) Chapter 8 [109] [110] (../../nfem/lib/form_element.9texi Overfull \hbox (118.41814pt too wide) in paragraph at lines 52--52 [] @texttt // for special forms for which coordinate-system specific w eights (ie, cylindrical[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 58--58 [] @texttt void operator() (const geo_element& K, ublas::matrix& m) const;[] ) (../../nfem/lib/iofem.9texi [111] Overfull \hbox (141.74222pt too wide) in paragraph at lines 24--24 [] @texttt cout << cut << origin(point(0.5, 0.5, 0.5)) << normal(po int(1,1,0) << uh;[] ) (../../nfem/lib/geomap.9texi [112] Overfull \hbox (66.67995pt too wide) in paragraph at lines 37--37 [] @texttt // Maps a quadrature-dependent lattice over Th_1 onto Th_2 triangulation.[] Overfull \hbox (221.89452pt too wide) in paragraph at lines 39--39 [] @texttt std::string quadrature="default", size_t ord er=0, bool allow_approximate_edges=true);[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 41--41 [] @texttt // Maps a quadrature-dependent lattice over Th_1 onto Th_2 triangulation[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 43--43 [] @texttt geomap (const geo& Th_2, const geo& Th_1, const field& advec tion_h_1,[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 44--44 [] @texttt std::string quadrature="default", size_t ord er=0) ;[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 47--47 [] @texttt // Maps space Vh_1 dof's onto the meshpoints of Th_2 triang ulation[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 52--52 [] @texttt // Same but for P1d, using points inside the triangle to pr eserve discontinuity[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 57--57 [] @texttt // Maps space Vh_1 dof's onto the meshpoints of Th_2 triang ulation[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 61--61 [] @texttt geomap (const geo& Th_2, const space& Vh_1, const field& adv ection_h_1);[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 63--63 [] @texttt // Does the same, but assumes that Th_2 is the triangulatio n for Vh_1[] Overfull \hbox (273.6327pt too wide) in paragraph at lines 64--64 [] @texttt geomap (const space& Vh_2, const field& advection_h_1, const geomap_option_type& opts = geomap_option_type());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 72--72 [] @texttt { if (!use_space) error_macro("Lattice-based geomaps use no space");[] [113] Overfull \hbox (89.6747pt too wide) in paragraph at lines 100--100 [] @texttt bool no_barycentric_weight() const { return _barycentric_wei ght == Float(0); }[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 110--110 [] @texttt meshpoint robust_advect_1 (const point& x0, const point& va, bool& is_inside) const;[] Overfull \hbox (279.3814pt too wide) in paragraph at lines 111--111 [] @texttt meshpoint robust_advect_N (const point& x0, const point& v0, const field& vh, size_t n, bool& is_inside) const;[] [114] Overfull \hbox (37.93651pt too wide) in paragraph at lines 138--138 []@texttt geomap::geomap (const geo& Th_2, const space& Vh_1, const field& adv ection) :[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 139--139 [] @texttt _Th_1 (Vh_1.get_geo()), _Th_2 (Th_2), _advection(advection), advected(true),[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 146--146 []@texttt geomap::geomap (const space& Vh_1, const field& advection, const geo map_option_type& opt) :[] Overfull \hbox (135.6642pt too wide) in paragraph at lines 147--147 [] @texttt _Th_1 (Vh_1.get_geo()), _Th_2 (Vh_1.get_geo()), _advection(a dvection), advected(true),[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 175--175 [] @texttt error_macro("The advection field should be defined on the or iginal mesh Th_1="[] [115] Overfull \hbox (20.69044pt too wide) in paragraph at lines 176--176 [] @texttt << Th_1.name() << " and not " << _advection.get_geo().na me());[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 204--204 []@texttt /* f being a field of space V, X a geomap on this space, foX=compos e(f,X) is their[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 211--211 []@texttt field compose (const field& f, const geomap& g, Float (*f_outside)(c onst point&));[] [116]) (../../nfem/lib/characteristic.9texi [117] Overfull \hbox (14.94176pt too wide) in paragraph at lines 57--57 [] @texttt field_o_characteristic(const field& fh, const characteristic & X);[] ) (../../nfem/basis/geo_element.9texi [118] [119] Overfull \hbox (89.6747pt too wide) in paragraph at lines 76--76 [] @texttt void build_subgeo(size_type subgeo_dim, size_type i_subgeo, geo_ element& S) const;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 98--98 [] @texttt friend std::ostream& operator << (std::ostream&, const geo_eleme nt&);[] ) (../../nfem/basis/prism.9texi [120] [121]) (../../nfem/basis/edge.9texi) (../../nfem/basis/tetra.9texi [122]) (../../nfem/basis/quadrature.9texi [123] Overfull \hbox (20.69044pt too wide) in paragraph at lines 68--68 [] @texttt mutable quadrature_on_geo _quad [reference_element::max_ size];[] ) (../../nfem/basis/reference_element.9texi [124] [125] Overfull \hbox (20.69044pt too wide) in paragraph at lines 81--81 [] @texttt size_type subgeo_size(size_type subgeo_dim, size_type i_subgeo) const;[] Overfull \hbox (221.89452pt too wide) in paragraph at lines 82--82 [] @texttt size_type subgeo_local_vertex(size_type subgeo_dim, size_type i_ subgeo, size_type i_subgeo_vertex) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 104--104 [] @texttt static const size_type _subgeo_size [max_size*4*max_n_su bgeo];[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 105--105 [] @texttt static const size_type _subgeo_local_vertex [max_size*4*max_n_su bgeo*max_subgeo_vertex];[] ) (../../nfem/basis/numbering.9texi [126] [127]) (../../nfem/basis/triangle.9texi) (../../nfem/basis/point.9texi [128]) (../../nfem/basis/basis.9texi Overfull \hbox (233.39189pt too wide) in paragraph at lines 49--49 [] @texttt size_type size (reference_element hat_K, dof_family_type famil y=reference_element::dof_family_max) const;[] [129]) (../../nfem/basis/hexa.9texi [130] [131]) (../../nfem/basis/quadrangle.9texi) (../../util/lib/heap_allocator.9texi [132] Overfull \hbox (147.16158pt too wide) in paragraph at lines 20--20 [] @texttt typedef map , heap_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24--24 [] @texttt for (map_type::iterator iter = a.begin(), last = a.end(); iter ! = last; iter++) {[] [133] Overfull \hbox (14.94176pt too wide) in paragraph at lines 60--60 [] @texttt : handler ((typename heap_allocator::handler_type*)(ha.hand ler))[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 88--88 [] @texttt size_type max_size() const { return std::numeric_limits::max() / sizeof(T); }[] [134]) (../../util/lib/pretty_name.9texi Overfull \hbox (135.6642pt too wide) in paragraph at lines 16--16 [] @texttt typedef map , heap_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24--24 []@texttt /// @brief get string from a type, with an optional pretty-printing for complex types[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 29--29 []@texttt template std::string typename_of (T x) { return typename_macro(T); }[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 30--30 []@texttt template std::string pretty_typename_of (T x) { return pre tty_typename_macro(T); }[] ) (../../util/lib/smart_pointer.9texi [135] [136]) (../../util/lib/stack_allocator.9texi Overfull \hbox (35.10944pt too wide) in paragraph at lines 16--19 @textrm ex-cep-tion is em-mited. For a non-limited mem-ory han-dler in the same spirit, see @texttt "@textrm heap[]allocator@texttt "@textrm (9). Overfull \hbox (72.42863pt too wide) in paragraph at lines 24--24 [] @texttt stack_allocator stack_alloc (stack.begin().operator->(), stack.size());[] Overfull \hbox (152.91026pt too wide) in paragraph at lines 25--25 [] @texttt typedef map , stack_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 29--29 [] @texttt for (map_type::iterator iter = a.begin(), last = a.end(); iter ! = last; iter++) {[] [137] Overfull \hbox (20.69044pt too wide) in paragraph at lines 70--70 [] @texttt : handler ((typename stack_allocator::handler_type*)(sa.han dler))[] [138] Overfull \hbox (129.91551pt too wide) in paragraph at lines 99--99 [] @texttt size_type max_size() const { return std::numeric_limits::max() / sizeof(T); }[] [139] Overfull \hbox (43.6852pt too wide) in paragraph at lines 161--161 [] @texttt warning_macro ("stack_allocator::mem_info cstori: size="<< max_size);[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 165--165 [] @texttt warning_macro ("stack_allocator::mem_info dstor: size="<& lhs, const stack_allocat or& rhs) throw()[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 178--178 []@texttt bool operator!=( const stack_allocator& lhs, const stack_allocat or& rhs) throw()[] ) (../../config/acinclude.9texi [140] Overfull \hbox (17.42508pt too wide) in paragraph at lines 107--118 []@textrm Check to see if spooles li-brary and head-ers ex-ists. If so, set the shell vari-able @texttt "@textrm rheo[]have[]spooles@texttt " Overfull \hbox (24.59909pt too wide) in paragraph at lines 107--118 @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]SPOOLES and su b-stitues IN-CLUDES[]SPOOLES and LADD[]SPOOLES [141] Overfull \hbox (29.95679pt too wide) in paragraph at lines 122--133 []@textrm Check to see if umf-pack li-brary and head-ers ex-ists. If so, set th e shell vari-able @texttt "@textrm rheo[]have[]umfpack@texttt " Overfull \hbox (40.56772pt too wide) in paragraph at lines 122--133 @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]UMFPACK and su b-stitues IN-CLUDES[]UMFPACK and LADD[]UMFPACK Overfull \hbox (33.95523pt too wide) in paragraph at lines 137--148 @textrm ex-ists. If so, set the shell vari-able @texttt rheo_have_malloc_dbg[] @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]MALLOC[]DBG, Overfull \hbox (37.5711pt too wide) in paragraph at lines 155--160 []@textrm Check whether the dmal-loc pack-age ex-ists and set the cor-re-spond- ing shell value @texttt "@textrm rheo[]have[]dmalloc@texttt " Overfull \hbox (10.89465pt too wide) in paragraph at lines 155--160 @textrm and HAVE[]DMALLOC (in Make-file.am and con-fig.h) ac-cord-ingly, cre-at e LDADD[]DMALLOC [142] [143] [144] Overfull \hbox (18.00768pt too wide) in paragraph at lines 372--377 []@textrm Check wheter we are us-ing CRAY C@texttt ++ @textrm com-piler. If so, set the shell vari-able @texttt "@textrm ac[]cv[]prog[]cray[]cc@texttt " Overfull \hbox (5.96268pt too wide) in paragraph at lines 380--386 []@textrm Check wheter we are us-ing DEC C@texttt ++ @textrm com-piler. If so, set the shell vari-able @texttt "@textrm ac[]cv[]prog[]dec[]cc@texttt " Overfull \hbox (83.07622pt too wide) in paragraph at lines 398--406 []@textrm If so, sub-stitue REC-OG-NIZED[]CXX to a spe-cific com-piler's rule f ile, e.g, @texttt "@textrm $@texttt {@textrm top[]srcdir@texttt }@textrm /confi g/gnu[]cxx.mk@texttt "@textrm , [145])) (./FAQ.texi Chapter 9 [146] Overfull \hbox (10.36597pt too wide) in paragraph at lines 77--82 []@textrm the au-to-mat-i-cally gen-er-ated script, scan the ma-chine and tran s-late `@texttt config.h.in[]@textrm '[], [147] [148]) (./gpl.texi Appendix @char @appendixno [149] [150] Underfull \hbox (badness 2368) in paragraph at lines 63--63 []@secrm TERMS AND CON-DI-TIONS FOR COPY-ING, [151] [152] [153] [154] [155] [156]) (Concept Index) [157] [158] (./rheolef.cps [159]) (Program Index) [160] (./rheolef.pgs) (Class Index) [161] [162] (./rheolef.cls) (Form Index) [163] [164] (./rheolef.bfs) (Approximation Index) [165] [166] (./rheolef.aps) (Function Index) [167] [168] (./rheolef.fns) (File Format Index) [169] [170] (./rheolef.fis) (Related Tool Index) [171] [172] (./rheolef.tos [173]) [174] (./rheolef.toc) [-1] [-2] (./rheolef.toc [-3] [-4] [-5]) [-6] ) (see the transcript file for additional information) Output written on rheolef.dvi (182 pages, 453508 bytes). Transcript written on rheolef.log. This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (././rheolef.texi (./texinfo.tex Loading texinfo [version 1999-03-26.17]: Basics, fonts, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, localization, and turning on texinfo input format.) (./rheolef.aux) (./myversion.texi) [1] [2] Chapter 1 (./introduction.texi) (./INSTALL.texi Chapter 2 [1] [2] Overfull \hbox (55.18257pt too wide) in paragraph at lines 60--60 [] @texttt firefox http://ljk.imag.fr/membres/Pierre.Saramito/rheolef/ rheolef.html[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 76--76 [] @texttt firefox http://ljk.imag.fr/membres/Pierre.Saramito/rheolef/ source_html/[] [3] [4] Overfull \hbox (49.43388pt too wide) in paragraph at lines 259--259 [] @texttt ./configure --with-taucs-ldadd='-ltaucs -llapack -lblas -lm etis -lg2c'[] [5] [6] Overfull \hbox (1.0965pt too wide) in paragraph at lines 443--445 []@textrm Set the home di-rec-tory for the @texttt cln[] @textrm li-brary. De- fault @textsl dir[]cln @textrm is `@texttt /usr/local/math[]@textrm '[]. [7] Overfull \hbox (31.82034pt too wide) in paragraph at lines 500--506 @textsl dir[]parmetis @textrm for @texttt libparmetis.so[]@textrm , @texttt li bparmetis.a[] @textrm and also @texttt libmetis.a[] libmetis.so[]@textrm . Overfull \hbox (83.97032pt too wide) in paragraph at lines 529--537 @texttt libumfpack.a[] @textrm and for header @textsl in-cdir[]umfpack@textrm /umfpack.h or @textsl in-cdir[]umfpack@textrm /umfpack/umfpack.h. [8] Overfull \hbox (0.94188pt too wide) in paragraph at lines 607--610 @textrm The user's man-ual goes into `@texttt doc/usrman/[]@textrm '[] and the the ref-er-ence man-ual into `@texttt doc/refman/[]@textrm '[]. [9] [10] Overfull \hbox (61.22774pt too wide) in paragraph at lines 782--786 $@textsy ^^O$ @textrm For par-tic-i-pat-ing to the rhe-olef con-cur-rent de-vel -op-ment, please con-tact also @texttt Pierre.Saramito@imag.fr[] ) Chapter 3 [11] [12] (./includes.texi Chapter 4 [13] [14] (../../nfem/bin/cemagref2field.1texi) (../../nfem/bin/bamg2geo.1texi [15] [16]) (../../nfem/bin/geo.1texi [17] [18] [19] Overfull \hbox (141.74222pt too wide) in paragraph at lines 293--293 [] @texttt geo -input-grummp -geo -upgrade -noverbose - < hex-multi. g > hex-multi.geo[] [20] Overfull \hbox (26.76846pt too wide) in paragraph at lines 332--332 [] @texttt geo -input-grummp -upgrade -geo - > multi-domain.geo[] [21] [22]) (../../nfem/bin/mesh2geo.1texi) (../../nfem/bin/mfield.1texi [23] [24] [25]) (../../nfem/bin/tetgen2geo.1texi [26]) (../../nfem/bin/branch.1texi [27] [28]) (../../nfem/bin/field.1texi [29] Overfull \hbox (26.43913pt too wide) in paragraph at lines 116--116 [] @texttt field -input-cemagref -field - < mytopo.cemagref > mytop o.field[] [30] [31] [32] Overfull \hbox (66.67995pt too wide) in paragraph at lines 298--298 [] @texttt field cube.field -cut -normal 0 1 0 -origin 0.5 0.5 0.5 -text > cube-cut.field[] ) (../../nfem/bin/space.1texi [33]) (../../nfem/bin/mkgeo_grid.1texi [34]) (../../nfem/bin/qmg2geo.1texi [35]) (../../nfem/bin/cad.1texi [36] [37]) (../../nfem/bin/grummp2geo.1texi) (../../nfem/bin/msh2geo.1texi) (../../config/rheolef-config.1texi [38] [39]) Chapter 5 [40] (../../nfem/lib/field.3texi) (../../nfem/lib/cad.3texi [41] Overfull \hbox (124.16682pt too wide) in paragraph at lines 57--57 [] @texttt void eval (const cad_element& S, const point& ref_coord, po int & real_coord) const;[] [42] Overfull \hbox (20.69044pt too wide) in paragraph at lines 63--63 [] @texttt friend std::ostream& operator << (std::ostream& os, const ca d& x);[] ) (../../nfem/lib/form.3texi Overfull \hbox (95.42339pt too wide) in paragraph at lines 51--51 [] @texttt form (const space& X, const space& Y, const std::string& op_name , const domain& d);[] [43] Overfull \hbox (72.42863pt too wide) in paragraph at lines 52--52 [] @texttt // Currently weighted forms in P2 spaces use a quadrature f ormula which is[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 54--54 [] @texttt form (const space& X, const space& Y, const std::string& op_name , const field& wh,[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 57--57 [] @texttt const domain& d, const field& wh, bool use_coordinate_system _weight=true);[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 68--68 [] @texttt bool for_locked_boundaries() const { return _for_locked_boundari es; }[] [44]) (../../nfem/lib/form_manip.3texi [45]) (../../nfem/lib/trace.3texi [46]) (../../nfem/lib/form_diag.3texi Overfull \hbox (37.93651pt too wide) in paragraph at lines 45--45 [] @texttt friend class field operator * (const form_diag& a, const class f ield& x);[] [47] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [] @texttt friend form_diag operator / (const Float& lambda, const form_dia g& m);[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 56--56 [] @texttt friend std::ostream& operator << (std::ostream& s, const form_di ag& a);[] ) (../../nfem/lib/form_diag_manip.3texi [48] Overfull \hbox (26.43913pt too wide) in paragraph at lines 48--48 [] @texttt form_diag_manip& operator<< (form_diag_manip& (*pf)(form_diag_ma nip&));[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 53--53 [] @texttt friend form_diag_manip& operator << (form_diag_manip &fm, const class sized& s);[] ) (../../nfem/lib/branch.3texi [49] Overfull \hbox (43.6852pt too wide) in paragraph at lines 47--47 [] @texttt branch (const std::string& parameter_name, const std::string & u_name);[] Overfull \hbox (198.89977pt too wide) in paragraph at lines 48--48 [] @texttt branch (const std::string& parameter_name, const std::string & u_name, const std::string& p_name);[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 73--73 [] @texttt __obranch operator() (const Float& t, const field& u, const field& p);[] ) (../../nfem/lib/space.3texi [50] [51] Overfull \hbox (141.41289pt too wide) in paragraph at lines 147--147 [] @texttt space (const geo& g, const std::string& approx_name, const std:: string& valued = "scalar");[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 149--149 [] @texttt const domain& interface, const domain& subgeo, const std::st ring& valued = "scalar");[] Overfull \hbox (147.16158pt too wide) in paragraph at lines 150--150 [] @texttt // For spaces with a discontinuity through domain `interfac e', but otherwise continuous[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 151--151 [] @texttt space (const geo& g, const domain& d, const std::string& approx_ name);[] [52] Overfull \hbox (83.92601pt too wide) in paragraph at lines 173--173 [] @texttt void set_periodic (const std::string& d1_name, const std::string & d2_name) const;[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 175--175 [] @texttt void lock_components (const std::string& d_name, point locked_di r) const;[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 177--177 [] @texttt void lock_components (const std::string& d_name, Function locked _dir) const;[] Overfull \hbox (164.40764pt too wide) in paragraph at lines 181--181 [] @texttt *! Current limitation: only 2D vector fields with component s having same FE approximation.[] Overfull \hbox (135.6642pt too wide) in paragraph at lines 182--182 [] @texttt *! The space has a dof for the direction normal to locked_d ir, while the value in the[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 184--184 [] @texttt *! The field::at function implements the reconstruction of the original cartesian components.[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 201--201 [] @texttt const basis& get_basis (size_type i_component = 0) const;[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 202--202 [] @texttt const numbering& get_numbering (size_type i_component = 0) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 203--203 [] @texttt std::string get_approx(size_type i_component = 0) const;[] [53] Overfull \hbox (101.17207pt too wide) in paragraph at lines 226--226 [] @texttt // for (2D) vector spaces only, field is only bloc ked along locked_dir[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 232--232 [] @texttt Float locked_component (size_type dof, size_type i_comp) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 234--234 [] @texttt Float unlocked_component (size_type dof, size_type i_comp) const;[] Overfull \hbox (221.89452pt too wide) in paragraph at lines 251--251 [] @texttt // "global" variants differ only for boundary spaces (n on-global uses domain-indices, global use[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 253--253 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx) const;[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 254--254 [] @texttt void set_global_dof (const geo_element& K, tiny_vector& idx) const;[] [54] Overfull \hbox (175.90501pt too wide) in paragraph at lines 255--255 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx, size_type i_comp) const;[] Overfull \hbox (175.90501pt too wide) in paragraph at lines 256--256 [] @texttt void set_global_dof (const geo_element& K, tiny_vector& idx, size_type i_comp) const;[] Overfull \hbox (423.09859pt too wide) in paragraph at lines 257--257 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx, size_type i_comp, reference_element::dof_family_type family) const;[] Overfull \hbox (239.14058pt too wide) in paragraph at lines 259--259 [] @texttt // Hermite/Argyris: returns 1 if the global dof contains the d erivative along outward normal of K, -1 else[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 260--260 [] @texttt void dof_orientation(const geo_element& K, tiny_vector& or ientation) const;[] ) (../../nfem/lib/geo.3texi [55] Overfull \hbox (60.93126pt too wide) in paragraph at lines 90--90 [] @texttt for (geo::const_iterator_vertex i = g.begin_vertex(); i != g.end_n ode(); i++) {[] [56] Overfull \hbox (72.42863pt too wide) in paragraph at lines 102--102 [] @texttt for (geo::const_iterator_domain i = g.begin_domain(); i != i.end_d omain(); i++) {[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 126--126 [] @texttt void write_gnuplot_postscript_options (std::ostream& plot, const p lot_options& opt) const;[] Overfull \hbox (106.92076pt too wide) in paragraph at lines 144--144 [] @texttt explicit geo (const std::string& filename, const std::string& coor d_sys = "cartesian");[] [57] Overfull \hbox (20.69044pt too wide) in paragraph at lines 191--191 [] @texttt void build_subregion(const domain& start_from, const domain& dont_ cross,[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 193--193 [] @texttt // Builds a new domain on the side of domain `dont_cross' on whic h `start_from'[] [58] Overfull \hbox (112.66945pt too wide) in paragraph at lines 230--230 [] @texttt void localize_nearest (const point& x, point& y, geo_element::size _type& element) const;[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 231--231 [] @texttt bool trace (const point& x0, const point& v, point& x, Float& t, s ize_type& element) const;[] [59] Overfull \hbox (37.93651pt too wide) in paragraph at lines 249--249 [] @texttt normal (const class space& Nh, const domain& d, const interface& b c) const;[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 254--254 [] @texttt tangent (const class space& Nh, const domain& d, const interface& bc) const;[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 259--259 [] @texttt tangent_spline (const space& Nh, const domain& d, const interface& bc) const;[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 268--268 [] @texttt // Gives curvature of d in the (x,y) or (r,z) plane based on a s pline interpolation.[] Overfull \hbox (152.91026pt too wide) in paragraph at lines 272--272 [] @texttt // Gives curvature of d in the (x,y) or (r,z) plane based on a l ocal quadratic interpolation.[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 281--281 [] @texttt // Can also initialize orientation of domain through `bc' data s tructure.[] [60] Overfull \hbox (37.93651pt too wide) in paragraph at lines 305--305 [] @texttt void set_coordinate_system (const std::string&); // "cartesian", " rz", "zr"[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 307--307 [] @texttt void label_interface(const domain& dom1, const domain& dom2, const std::string& name);[] Overfull \hbox (112.66945pt too wide) in paragraph at lines 315--315 [] @texttt void init_localizer (const domain& boundary, Float tolerance=-1, i nt list_size=0) const;[] [61]) (../../nfem/lib/domain.3texi Overfull \hbox (106.92076pt too wide) in paragraph at lines 47--47 [] @texttt void set(IteratorElement p, size_type n, size_type dim, cons t std::string& name);[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 51--51 [] @texttt friend std::ostream& operator << (std::ostream& s, const domai n& d);[] [62] Overfull \hbox (89.6747pt too wide) in paragraph at lines 53--53 [] @texttt std::ostream& put_vtk (std::ostream& vtk, Vector::const _iterator first_p,[] ) (../../nfem/basis/point.3texi Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [] @texttt explicit basic_point () { _x[0] = T(); _x[1] = T(); _x[2] = T(); }[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 39--39 [] @texttt { _x[0] = p._x[0]; _x[1] = p._x[1]; _x[2] = p._x[2]; return *this; }[] [63] Overfull \hbox (14.94176pt too wide) in paragraph at lines 43--43 [] @texttt T& operator[](int i_coord) { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 44--44 [] @texttt const T& operator[](int i_coord) const { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 45--45 [] @texttt T& operator()(int i_coord) { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 46--46 [] @texttt const T& operator()(int i_coord) const { return _x[i_coord% 3]; }[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 75--75 [] @texttt friend bool operator == (const basic_point& u, const basi c_point& v)[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 79--79 [] @texttt { _x[0] += v[0]; _x[1] += v[1]; _x[2] += v[2]; retur n *this; }[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 82--82 [] @texttt { _x[0] -= v[0]; _x[1] -= v[1]; _x[2] -= v[2]; retur n *this; }[] [64] Overfull \hbox (112.66945pt too wide) in paragraph at lines 90--90 [] @texttt friend basic_point operator+ (const basic_point& u, co nst basic_point& v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 91--91 [] @texttt { return basic_point (u[0]+v[0], u[1]+v[1], u[2]+ v[2]); }[] Overfull \hbox (112.66945pt too wide) in paragraph at lines 96--96 [] @texttt friend basic_point operator- (const basic_point& u, co nst basic_point& v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 97--97 [] @texttt { return basic_point (u[0]-v[0], u[1]-v[1], u[2]- v[2]); }[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 100--100 [] @texttt friend basic_point operator* (const T1& a, const basic_po int& u)[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 106--106 [] @texttt friend basic_point operator/ (const basic_point& u, co nst T& a)[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 109--109 [] @texttt friend basic_point operator/ (const basic_point& u, ba sic_point v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 110--110 [] @texttt { return basic_point (u[0]/v[0], u[1]/v[1], u[2]/ v[2]); }[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 112--112 [] @texttt friend basic_point vect (const basic_point& v, const b asic_point& w)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 129--129 [] @texttt friend T dist2 (const basic_point& x, const basic_point< T>& y)[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 132--132 [] @texttt friend T dist (const basic_point& x, const basic_point& y)[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 135--135 [] @texttt friend T dist_infty (const basic_point& x, const basic_p oint& y)[] [65] Overfull \hbox (32.18782pt too wide) in paragraph at lines 137--137 [] @texttt max(_my_abs(x[1]-y[1]), _my_abs(x[2]-y[ 2]))); }[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 149--149 []@texttt T mixt (const basic_point& u, const basic_point& v, const basi c_point& w);[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 151--151 []@texttt // robust(exact) floating point predicates: return value as (0, > 0, < 0)[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 160--160 [] @texttt const basic_point& c, const basic_point& x = basic_poi nt());[] ) (../../nfem/basis/tensor.3texi [66] Overfull \hbox (43.6852pt too wide) in paragraph at lines 54--54 [] @texttt friend std::ostream& operator << (std::ostream& out, const t ensor& a);[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 78--78 [] @texttt friend Float dist2 (const tensor& a, const tensor& b) { retu rn norm2(a-b); }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 79--79 [] @texttt friend Float norm (const tensor& a) { return ::sqrt(norm2(a )); }[] [67] Overfull \hbox (72.42863pt too wide) in paragraph at lines 80--80 [] @texttt friend Float dist (const tensor& a, const tensor& b) { retu rn norm(a-b); }[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 89--89 [] @texttt // where q=(q1,q2,q3) are eigenvectors in rows (othonormal m atrix)[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 90--90 [] @texttt // and d=(d1,d2,d3) are eigenvalues, sorted in decreasing order d1 >= d2 >= d3[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 98--98 [] @texttt // where u=(u1,u2,u3) are left pseudo-eigenvectors in rows ( othonormal matrix)[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 99--99 [] @texttt // v=(v1,v2,v3) are right pseudo-eigenvectors in rows (othonormal matrix)[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 100--100 [] @texttt // and s=(s1,s2,s3) are eigenvalues, sorted in decreasing order s1 >= s2 >= s3[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 112--112 []@texttt void cumul_otimes (tensor& t, const point& a, const point& b, size_t na = 3);[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 113--113 []@texttt void cumul_otimes (tensor& t, const point& a, const point& b, size_t na, size_t nb);[] ) (../../skit/lib/ic0.3texi [68]) (../../skit/lib/ssk.3texi [69] [70]) (../../skit/lib/permutation.3texi [71]) (../../skit/lib/vec.3texi [72] Overfull \hbox (135.6642pt too wide) in paragraph at lines 106--106 [] @texttt explicit vec (unsigned int n = 0, const T& init_value = std: :numeric_limits::max())[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 117--117 [] @texttt vec(const VExpr& x) : Array(x.size()) { assign (*this, x); }[] [73] Overfull \hbox (43.6852pt too wide) in paragraph at lines 121--121 [] @texttt { logmodif(*this); return assign (*t his, x); }[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 126--126 []@texttt template std::ostream& operator << (std::ostream&, const v ec&);[] ) (../../skit/lib/diag.3texi [74]) (../../skit/lib/csr.3texi [75] [76]) (../../util/lib/iorheo.3texi [77]) (../../util/lib/rheostream.3texi [78] Overfull \hbox (78.17732pt too wide) in paragraph at lines 133--133 [] @texttt irheostream(const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 135--135 [] @texttt void open (const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 143--143 [] @texttt orheostream(const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 145--145 [] @texttt void open (const std::string& name, const std::string& suffix = std::string());[] [79] Overfull \hbox (49.43388pt too wide) in paragraph at lines 160--160 []@texttt std::string delete_suffix (const std::string& name, const std::strin g& suffix);[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 169--169 []@texttt std::string get_full_name_from_rheo_path (const std::string& rootnam e, const std::string& suffix);[] ) (../../util/lib/Vector.3texi [80] [81] Overfull \hbox (49.43388pt too wide) in paragraph at lines 103--103 [] @texttt void insert (iterator position, const_iterator first, const_iter ator last);[] ) (../../util/lib/catchmark.3texi Overfull \hbox (55.18257pt too wide) in paragraph at lines 26--26 [] @texttt friend std::istream& operator >> (std::istream& is, const ca tchmark& m);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 27--27 [] @texttt friend std::ostream& operator << (std::ostream& os, const ca tchmark& m);[] ) Chapter 6 [82] [83] [84] (../../nfem/lib/riesz_representer.5texi) (../../nfem/lib/newton.5texi [85] Overfull \hbox (118.41814pt too wide) in paragraph at lines 40--40 []@texttt int newton (Problem P, Field& uh, Float& tol, size_t& max_iter, std: :ostream *p_cerr = 0) {[] ) (../../nfem/lib/damped-newton.5texi [86] Overfull \hbox (124.16682pt too wide) in paragraph at lines 41--41 []@texttt int damped_newton (Problem P, Field& u, Real& tol, Size& max_iter, s td::ostream* p_cerr=0) {[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 42--42 [] @texttt return damped_newton(P, newton_identity_preconditioner(), u, tol, max_iter, p_cerr);[] ) (../../skit/lib/pminres.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (89.6747pt too wide) in paragraph at lines 13--13 [] @texttt int pminres (const Matrix &A, Vector &x, const Vector &b, const Preconditioner &M,[] [87] Overfull \hbox (72.42863pt too wide) in paragraph at lines 62--62 []@texttt template [] Overfull \hbox (66.67995pt too wide) in paragraph at lines 63--63 []@texttt int pminres(const Matrix &A, Vector &x, const Vector &Mb, const Prec onditioner &M,[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 64--64 [] @texttt Size &max_iter, Real &tol, std::ostream *p_cerr = 0, std::string l abel = "minres")[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 74--74 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 75--75 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] 0 " << norm_r/norm_b < < std::endl;[] [88] [89] Overfull \hbox (124.16682pt too wide) in paragraph at lines 135--135 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << nor m_r/norm_b << std::endl;[] ) (../../skit/lib/puzawa.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (83.92601pt too wide) in paragraph at lines 13--13 [] @texttt int puzawa (const Matrix &A, Vector &x, const Vector &b, const P reconditioner &M,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14--14 [] @texttt int &max_iter, Real &tol, const Real& rho, std::ostream *p_cer r=0);[] [90] Overfull \hbox (78.17732pt too wide) in paragraph at lines 58--58 []@texttt template < class Matrix, class Vector, class Preconditioner, class R eal, class Size>[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 59--59 []@texttt int puzawa(const Matrix &A, Vector &x, const Vector &Mb, const Preco nditioner &M,[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 67--67 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (193.15108pt too wide) in paragraph at lines 72--72 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << sqrt(norm2_r/norm2_b) << std::endl;[] ) (../../skit/lib/gmres.5texi Overfull \hbox (60.93126pt too wide) in paragraph at lines 14--14 [] @texttt const Preconditioner &M, Matrix &H, Int m, Int &max_iter , Real &tol);[] [91] Overfull \hbox (98.24414pt too wide) in paragraph at lines 91--94 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . [92] [93] [94]) (../../skit/lib/pcg.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14--14 [] @texttt const Preconditioner &M, int &max_iter, Real &tol, std::ostrea m *p_cerr=0);[] [95] Overfull \hbox (98.24414pt too wide) in paragraph at lines 66--70 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . Overfull \hbox (78.17732pt too wide) in paragraph at lines 75--75 []@texttt template < class Matrix, class Vector, class Preconditioner, class R eal, class Size>[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 76--76 []@texttt int pcg(const Matrix &A, Vector &x, const Vector &Mb, const Precondi tioner &M,[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 77--77 [] @texttt Size &max_iter, Real &tol, std::ostream *p_cerr = 0, std::st ring label = "cg")[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 84--84 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (204.64845pt too wide) in paragraph at lines 90--90 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << ::sqrt(norm2_r/norm2_b) << std::endl;[] ) (../../skit/lib/qmr.5texi [96] Overfull \hbox (98.24414pt too wide) in paragraph at lines 75--78 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . ) (../../skit/lib/bicgstab.5texi [97] Overfull \hbox (98.24414pt too wide) in paragraph at lines 58--61 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . ) (../../skit/lib/mixed_solver.5texi Overfull \hbox (175.90501pt too wide) in paragraph at lines 20--20 [] @texttt template [] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21--21 [] @texttt int pcg_abtb (const Matrix& A, const Matrix& B, Vector& u, Vecto r& p,[] [98] Overfull \hbox (175.90501pt too wide) in paragraph at lines 26--26 [] @texttt template [] Overfull \hbox (118.41814pt too wide) in paragraph at lines 27--27 [] @texttt int pcg_abtbc (const Matrix& A, const Matrix& B, const Matrix& C , Vector& u, Vector& p,[] ) Chapter 7 [99] [100] (../../nfem/form_element/d_dx.7texi) (../../nfem/form_element/2W.7texi [101]) (../../nfem/form_element/2D.7texi) (../../nfem/form_element/convect.7texi) (../../nfem/form_element/div_div.7texi [102]) (../../nfem/form_element/inv_mass.7texi [103]) (../../nfem/form_element/mass.7texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 24--24 [] @texttt form (const space& V, const space& V, "mass", const domain& gamma);[] [104]) (../../nfem/form_element/div.7texi [105]) (../../nfem/form_element/d_ds.7texi) (../../nfem/form_element/curl.7texi [106]) (../../nfem/form_element/d2_ds2.7texi) (../../nfem/form_element/grad.7texi [107]) (../../nfem/form_element/grad_grad.7texi) (../../nfem/form_element/2D_D.7texi [108]) Chapter 8 [109] [110] (../../nfem/lib/form_element.9texi Overfull \hbox (118.41814pt too wide) in paragraph at lines 52--52 [] @texttt // for special forms for which coordinate-system specific w eights (ie, cylindrical[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 58--58 [] @texttt void operator() (const geo_element& K, ublas::matrix& m) const;[] ) (../../nfem/lib/iofem.9texi [111] Overfull \hbox (141.74222pt too wide) in paragraph at lines 24--24 [] @texttt cout << cut << origin(point(0.5, 0.5, 0.5)) << normal(po int(1,1,0) << uh;[] ) (../../nfem/lib/geomap.9texi [112] Overfull \hbox (66.67995pt too wide) in paragraph at lines 37--37 [] @texttt // Maps a quadrature-dependent lattice over Th_1 onto Th_2 triangulation.[] Overfull \hbox (221.89452pt too wide) in paragraph at lines 39--39 [] @texttt std::string quadrature="default", size_t ord er=0, bool allow_approximate_edges=true);[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 41--41 [] @texttt // Maps a quadrature-dependent lattice over Th_1 onto Th_2 triangulation[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 43--43 [] @texttt geomap (const geo& Th_2, const geo& Th_1, const field& advec tion_h_1,[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 44--44 [] @texttt std::string quadrature="default", size_t ord er=0) ;[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 47--47 [] @texttt // Maps space Vh_1 dof's onto the meshpoints of Th_2 triang ulation[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 52--52 [] @texttt // Same but for P1d, using points inside the triangle to pr eserve discontinuity[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 57--57 [] @texttt // Maps space Vh_1 dof's onto the meshpoints of Th_2 triang ulation[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 61--61 [] @texttt geomap (const geo& Th_2, const space& Vh_1, const field& adv ection_h_1);[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 63--63 [] @texttt // Does the same, but assumes that Th_2 is the triangulatio n for Vh_1[] Overfull \hbox (273.6327pt too wide) in paragraph at lines 64--64 [] @texttt geomap (const space& Vh_2, const field& advection_h_1, const geomap_option_type& opts = geomap_option_type());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 72--72 [] @texttt { if (!use_space) error_macro("Lattice-based geomaps use no space");[] [113] Overfull \hbox (89.6747pt too wide) in paragraph at lines 100--100 [] @texttt bool no_barycentric_weight() const { return _barycentric_wei ght == Float(0); }[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 110--110 [] @texttt meshpoint robust_advect_1 (const point& x0, const point& va, bool& is_inside) const;[] Overfull \hbox (279.3814pt too wide) in paragraph at lines 111--111 [] @texttt meshpoint robust_advect_N (const point& x0, const point& v0, const field& vh, size_t n, bool& is_inside) const;[] [114] Overfull \hbox (37.93651pt too wide) in paragraph at lines 138--138 []@texttt geomap::geomap (const geo& Th_2, const space& Vh_1, const field& adv ection) :[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 139--139 [] @texttt _Th_1 (Vh_1.get_geo()), _Th_2 (Th_2), _advection(advection), advected(true),[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 146--146 []@texttt geomap::geomap (const space& Vh_1, const field& advection, const geo map_option_type& opt) :[] Overfull \hbox (135.6642pt too wide) in paragraph at lines 147--147 [] @texttt _Th_1 (Vh_1.get_geo()), _Th_2 (Vh_1.get_geo()), _advection(a dvection), advected(true),[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 175--175 [] @texttt error_macro("The advection field should be defined on the or iginal mesh Th_1="[] [115] Overfull \hbox (20.69044pt too wide) in paragraph at lines 176--176 [] @texttt << Th_1.name() << " and not " << _advection.get_geo().na me());[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 204--204 []@texttt /* f being a field of space V, X a geomap on this space, foX=compos e(f,X) is their[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 211--211 []@texttt field compose (const field& f, const geomap& g, Float (*f_outside)(c onst point&));[] [116]) (../../nfem/lib/characteristic.9texi [117] Overfull \hbox (14.94176pt too wide) in paragraph at lines 57--57 [] @texttt field_o_characteristic(const field& fh, const characteristic & X);[] ) (../../nfem/basis/geo_element.9texi [118] [119] Overfull \hbox (89.6747pt too wide) in paragraph at lines 76--76 [] @texttt void build_subgeo(size_type subgeo_dim, size_type i_subgeo, geo_ element& S) const;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 98--98 [] @texttt friend std::ostream& operator << (std::ostream&, const geo_eleme nt&);[] ) (../../nfem/basis/prism.9texi [120] [121]) (../../nfem/basis/edge.9texi) (../../nfem/basis/tetra.9texi [122]) (../../nfem/basis/quadrature.9texi [123] Overfull \hbox (20.69044pt too wide) in paragraph at lines 68--68 [] @texttt mutable quadrature_on_geo _quad [reference_element::max_ size];[] ) (../../nfem/basis/reference_element.9texi [124] [125] Overfull \hbox (20.69044pt too wide) in paragraph at lines 81--81 [] @texttt size_type subgeo_size(size_type subgeo_dim, size_type i_subgeo) const;[] Overfull \hbox (221.89452pt too wide) in paragraph at lines 82--82 [] @texttt size_type subgeo_local_vertex(size_type subgeo_dim, size_type i_ subgeo, size_type i_subgeo_vertex) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 104--104 [] @texttt static const size_type _subgeo_size [max_size*4*max_n_su bgeo];[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 105--105 [] @texttt static const size_type _subgeo_local_vertex [max_size*4*max_n_su bgeo*max_subgeo_vertex];[] ) (../../nfem/basis/numbering.9texi [126] [127]) (../../nfem/basis/triangle.9texi) (../../nfem/basis/point.9texi [128]) (../../nfem/basis/basis.9texi Overfull \hbox (233.39189pt too wide) in paragraph at lines 49--49 [] @texttt size_type size (reference_element hat_K, dof_family_type famil y=reference_element::dof_family_max) const;[] [129]) (../../nfem/basis/hexa.9texi [130] [131]) (../../nfem/basis/quadrangle.9texi) (../../util/lib/heap_allocator.9texi [132] Overfull \hbox (147.16158pt too wide) in paragraph at lines 20--20 [] @texttt typedef map , heap_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24--24 [] @texttt for (map_type::iterator iter = a.begin(), last = a.end(); iter ! = last; iter++) {[] [133] Overfull \hbox (14.94176pt too wide) in paragraph at lines 60--60 [] @texttt : handler ((typename heap_allocator::handler_type*)(ha.hand ler))[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 88--88 [] @texttt size_type max_size() const { return std::numeric_limits::max() / sizeof(T); }[] [134]) (../../util/lib/pretty_name.9texi Overfull \hbox (135.6642pt too wide) in paragraph at lines 16--16 [] @texttt typedef map , heap_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24--24 []@texttt /// @brief get string from a type, with an optional pretty-printing for complex types[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 29--29 []@texttt template std::string typename_of (T x) { return typename_macro(T); }[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 30--30 []@texttt template std::string pretty_typename_of (T x) { return pre tty_typename_macro(T); }[] ) (../../util/lib/smart_pointer.9texi [135] [136]) (../../util/lib/stack_allocator.9texi Overfull \hbox (35.10944pt too wide) in paragraph at lines 16--19 @textrm ex-cep-tion is em-mited. For a non-limited mem-ory han-dler in the same spirit, see @texttt "@textrm heap[]allocator@texttt "@textrm (9). Overfull \hbox (72.42863pt too wide) in paragraph at lines 24--24 [] @texttt stack_allocator stack_alloc (stack.begin().operator->(), stack.size());[] Overfull \hbox (152.91026pt too wide) in paragraph at lines 25--25 [] @texttt typedef map , stack_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 29--29 [] @texttt for (map_type::iterator iter = a.begin(), last = a.end(); iter ! = last; iter++) {[] [137] Overfull \hbox (20.69044pt too wide) in paragraph at lines 70--70 [] @texttt : handler ((typename stack_allocator::handler_type*)(sa.han dler))[] [138] Overfull \hbox (129.91551pt too wide) in paragraph at lines 99--99 [] @texttt size_type max_size() const { return std::numeric_limits::max() / sizeof(T); }[] [139] Overfull \hbox (43.6852pt too wide) in paragraph at lines 161--161 [] @texttt warning_macro ("stack_allocator::mem_info cstori: size="<< max_size);[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 165--165 [] @texttt warning_macro ("stack_allocator::mem_info dstor: size="<& lhs, const stack_allocat or& rhs) throw()[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 178--178 []@texttt bool operator!=( const stack_allocator& lhs, const stack_allocat or& rhs) throw()[] ) (../../config/acinclude.9texi [140] Overfull \hbox (17.42508pt too wide) in paragraph at lines 107--118 []@textrm Check to see if spooles li-brary and head-ers ex-ists. If so, set the shell vari-able @texttt "@textrm rheo[]have[]spooles@texttt " Overfull \hbox (24.59909pt too wide) in paragraph at lines 107--118 @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]SPOOLES and su b-stitues IN-CLUDES[]SPOOLES and LADD[]SPOOLES [141] Overfull \hbox (29.95679pt too wide) in paragraph at lines 122--133 []@textrm Check to see if umf-pack li-brary and head-ers ex-ists. If so, set th e shell vari-able @texttt "@textrm rheo[]have[]umfpack@texttt " Overfull \hbox (40.56772pt too wide) in paragraph at lines 122--133 @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]UMFPACK and su b-stitues IN-CLUDES[]UMFPACK and LADD[]UMFPACK Overfull \hbox (33.95523pt too wide) in paragraph at lines 137--148 @textrm ex-ists. If so, set the shell vari-able @texttt rheo_have_malloc_dbg[] @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]MALLOC[]DBG, Overfull \hbox (37.5711pt too wide) in paragraph at lines 155--160 []@textrm Check whether the dmal-loc pack-age ex-ists and set the cor-re-spond- ing shell value @texttt "@textrm rheo[]have[]dmalloc@texttt " Overfull \hbox (10.89465pt too wide) in paragraph at lines 155--160 @textrm and HAVE[]DMALLOC (in Make-file.am and con-fig.h) ac-cord-ingly, cre-at e LDADD[]DMALLOC [142] [143] [144] Overfull \hbox (18.00768pt too wide) in paragraph at lines 372--377 []@textrm Check wheter we are us-ing CRAY C@texttt ++ @textrm com-piler. If so, set the shell vari-able @texttt "@textrm ac[]cv[]prog[]cray[]cc@texttt " Overfull \hbox (5.96268pt too wide) in paragraph at lines 380--386 []@textrm Check wheter we are us-ing DEC C@texttt ++ @textrm com-piler. If so, set the shell vari-able @texttt "@textrm ac[]cv[]prog[]dec[]cc@texttt " Overfull \hbox (83.07622pt too wide) in paragraph at lines 398--406 []@textrm If so, sub-stitue REC-OG-NIZED[]CXX to a spe-cific com-piler's rule f ile, e.g, @texttt "@textrm $@texttt {@textrm top[]srcdir@texttt }@textrm /confi g/gnu[]cxx.mk@texttt "@textrm , [145])) (./FAQ.texi Chapter 9 [146] Overfull \hbox (10.36597pt too wide) in paragraph at lines 77--82 []@textrm the au-to-mat-i-cally gen-er-ated script, scan the ma-chine and tran s-late `@texttt config.h.in[]@textrm '[], [147] [148]) (./gpl.texi Appendix @char @appendixno [149] [150] Underfull \hbox (badness 2368) in paragraph at lines 63--63 []@secrm TERMS AND CON-DI-TIONS FOR COPY-ING, [151] [152] [153] [154] [155] [156]) (Concept Index) [157] [158] (./rheolef.cps [159]) (Program Index) [160] (./rheolef.pgs) (Class Index) [161] [162] (./rheolef.cls) (Form Index) [163] [164] (./rheolef.bfs) (Approximation Index) [165] [166] (./rheolef.aps) (Function Index) [167] [168] (./rheolef.fns) (File Format Index) [169] [170] (./rheolef.fis) (Related Tool Index) [171] [172] (./rheolef.tos [173]) [174] (./rheolef.toc) [-1] [-2] (./rheolef.toc [-3] [-4] [-5]) [-6] ) (see the transcript file for additional information) Output written on rheolef.dvi (182 pages, 453508 bytes). Transcript written on rheolef.log. TEXINPUTS=./:./:../../demo/:../../config/: MAKEINFO='makeinfo -I . -I .' texi2pdf ./ This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (././rheolef.texi (./texinfo.tex Loading texinfo [version 1999-03-26.17]: Basics, fonts, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, localization, and turning on texinfo input format.) (./rheolef.aux) (./myversion.texi) [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] Chapter 1 (./introduction.texi) (./INSTALL.texi Chapter 2 [1] [2] Overfull \hbox (55.18257pt too wide) in paragraph at lines 60--60 [] @texttt firefox http://ljk.imag.fr/membres/Pierre.Saramito/rheolef/ rheolef.html[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 76--76 [] @texttt firefox http://ljk.imag.fr/membres/Pierre.Saramito/rheolef/ source_html/[] [3] [4] Overfull \hbox (49.43388pt too wide) in paragraph at lines 259--259 [] @texttt ./configure --with-taucs-ldadd='-ltaucs -llapack -lblas -lm etis -lg2c'[] [5] [6] Overfull \hbox (1.0965pt too wide) in paragraph at lines 443--445 []@textrm Set the home di-rec-tory for the @texttt cln[] @textrm li-brary. De- fault @textsl dir[]cln @textrm is `@texttt /usr/local/math[]@textrm '[]. [7] Overfull \hbox (31.82034pt too wide) in paragraph at lines 500--506 @textsl dir[]parmetis @textrm for @texttt libparmetis.so[]@textrm , @texttt li bparmetis.a[] @textrm and also @texttt libmetis.a[] libmetis.so[]@textrm . Overfull \hbox (83.97032pt too wide) in paragraph at lines 529--537 @texttt libumfpack.a[] @textrm and for header @textsl in-cdir[]umfpack@textrm /umfpack.h or @textsl in-cdir[]umfpack@textrm /umfpack/umfpack.h. [8] Overfull \hbox (0.94188pt too wide) in paragraph at lines 607--610 @textrm The user's man-ual goes into `@texttt doc/usrman/[]@textrm '[] and the the ref-er-ence man-ual into `@texttt doc/refman/[]@textrm '[]. [9] [10] Overfull \hbox (61.22774pt too wide) in paragraph at lines 782--786 $@textsy ^^O$ @textrm For par-tic-i-pat-ing to the rhe-olef con-cur-rent de-vel -op-ment, please con-tact also @texttt Pierre.Saramito@imag.fr[] ) Chapter 3 [11] [12] (./includes.texi Chapter 4 [13] [14] (../../nfem/bin/cemagref2field.1texi) (../../nfem/bin/bamg2geo.1texi [15] [16]) (../../nfem/bin/geo.1texi [17] [18] [19] Overfull \hbox (141.74222pt too wide) in paragraph at lines 293--293 [] @texttt geo -input-grummp -geo -upgrade -noverbose - < hex-multi. g > hex-multi.geo[] [20] Overfull \hbox (26.76846pt too wide) in paragraph at lines 332--332 [] @texttt geo -input-grummp -upgrade -geo - > multi-domain.geo[] [21] [22]) (../../nfem/bin/mesh2geo.1texi) (../../nfem/bin/mfield.1texi [23] [24] [25]) (../../nfem/bin/tetgen2geo.1texi [26]) (../../nfem/bin/branch.1texi [27] [28]) (../../nfem/bin/field.1texi [29] Overfull \hbox (26.43913pt too wide) in paragraph at lines 116--116 [] @texttt field -input-cemagref -field - < mytopo.cemagref > mytop o.field[] [30] [31] [32] Overfull \hbox (66.67995pt too wide) in paragraph at lines 298--298 [] @texttt field cube.field -cut -normal 0 1 0 -origin 0.5 0.5 0.5 -text > cube-cut.field[] ) (../../nfem/bin/space.1texi [33]) (../../nfem/bin/mkgeo_grid.1texi [34]) (../../nfem/bin/qmg2geo.1texi [35]) (../../nfem/bin/cad.1texi [36] [37]) (../../nfem/bin/grummp2geo.1texi) (../../nfem/bin/msh2geo.1texi) (../../config/rheolef-config.1texi [38] [39]) Chapter 5 [40] (../../nfem/lib/field.3texi) (../../nfem/lib/cad.3texi [41] Overfull \hbox (124.16682pt too wide) in paragraph at lines 57--57 [] @texttt void eval (const cad_element& S, const point& ref_coord, po int & real_coord) const;[] [42] Overfull \hbox (20.69044pt too wide) in paragraph at lines 63--63 [] @texttt friend std::ostream& operator << (std::ostream& os, const ca d& x);[] ) (../../nfem/lib/form.3texi Overfull \hbox (95.42339pt too wide) in paragraph at lines 51--51 [] @texttt form (const space& X, const space& Y, const std::string& op_name , const domain& d);[] [43] Overfull \hbox (72.42863pt too wide) in paragraph at lines 52--52 [] @texttt // Currently weighted forms in P2 spaces use a quadrature f ormula which is[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 54--54 [] @texttt form (const space& X, const space& Y, const std::string& op_name , const field& wh,[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 57--57 [] @texttt const domain& d, const field& wh, bool use_coordinate_system _weight=true);[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 68--68 [] @texttt bool for_locked_boundaries() const { return _for_locked_boundari es; }[] [44]) (../../nfem/lib/form_manip.3texi [45]) (../../nfem/lib/trace.3texi [46]) (../../nfem/lib/form_diag.3texi Overfull \hbox (37.93651pt too wide) in paragraph at lines 45--45 [] @texttt friend class field operator * (const form_diag& a, const class f ield& x);[] [47] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [] @texttt friend form_diag operator / (const Float& lambda, const form_dia g& m);[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 56--56 [] @texttt friend std::ostream& operator << (std::ostream& s, const form_di ag& a);[] ) (../../nfem/lib/form_diag_manip.3texi [48] Overfull \hbox (26.43913pt too wide) in paragraph at lines 48--48 [] @texttt form_diag_manip& operator<< (form_diag_manip& (*pf)(form_diag_ma nip&));[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 53--53 [] @texttt friend form_diag_manip& operator << (form_diag_manip &fm, const class sized& s);[] ) (../../nfem/lib/branch.3texi [49] Overfull \hbox (43.6852pt too wide) in paragraph at lines 47--47 [] @texttt branch (const std::string& parameter_name, const std::string & u_name);[] Overfull \hbox (198.89977pt too wide) in paragraph at lines 48--48 [] @texttt branch (const std::string& parameter_name, const std::string & u_name, const std::string& p_name);[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 73--73 [] @texttt __obranch operator() (const Float& t, const field& u, const field& p);[] ) (../../nfem/lib/space.3texi [50] [51] Overfull \hbox (141.41289pt too wide) in paragraph at lines 147--147 [] @texttt space (const geo& g, const std::string& approx_name, const std:: string& valued = "scalar");[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 149--149 [] @texttt const domain& interface, const domain& subgeo, const std::st ring& valued = "scalar");[] Overfull \hbox (147.16158pt too wide) in paragraph at lines 150--150 [] @texttt // For spaces with a discontinuity through domain `interfac e', but otherwise continuous[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 151--151 [] @texttt space (const geo& g, const domain& d, const std::string& approx_ name);[] [52] Overfull \hbox (83.92601pt too wide) in paragraph at lines 173--173 [] @texttt void set_periodic (const std::string& d1_name, const std::string & d2_name) const;[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 175--175 [] @texttt void lock_components (const std::string& d_name, point locked_di r) const;[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 177--177 [] @texttt void lock_components (const std::string& d_name, Function locked _dir) const;[] Overfull \hbox (164.40764pt too wide) in paragraph at lines 181--181 [] @texttt *! Current limitation: only 2D vector fields with component s having same FE approximation.[] Overfull \hbox (135.6642pt too wide) in paragraph at lines 182--182 [] @texttt *! The space has a dof for the direction normal to locked_d ir, while the value in the[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 184--184 [] @texttt *! The field::at function implements the reconstruction of the original cartesian components.[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 201--201 [] @texttt const basis& get_basis (size_type i_component = 0) const;[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 202--202 [] @texttt const numbering& get_numbering (size_type i_component = 0) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 203--203 [] @texttt std::string get_approx(size_type i_component = 0) const;[] [53] Overfull \hbox (101.17207pt too wide) in paragraph at lines 226--226 [] @texttt // for (2D) vector spaces only, field is only bloc ked along locked_dir[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 232--232 [] @texttt Float locked_component (size_type dof, size_type i_comp) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 234--234 [] @texttt Float unlocked_component (size_type dof, size_type i_comp) const;[] Overfull \hbox (221.89452pt too wide) in paragraph at lines 251--251 [] @texttt // "global" variants differ only for boundary spaces (n on-global uses domain-indices, global use[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 253--253 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx) const;[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 254--254 [] @texttt void set_global_dof (const geo_element& K, tiny_vector& idx) const;[] [54] Overfull \hbox (175.90501pt too wide) in paragraph at lines 255--255 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx, size_type i_comp) const;[] Overfull \hbox (175.90501pt too wide) in paragraph at lines 256--256 [] @texttt void set_global_dof (const geo_element& K, tiny_vector& idx, size_type i_comp) const;[] Overfull \hbox (423.09859pt too wide) in paragraph at lines 257--257 [] @texttt void set_dof (const geo_element& K, tiny_vector& idx, size_type i_comp, reference_element::dof_family_type family) const;[] Overfull \hbox (239.14058pt too wide) in paragraph at lines 259--259 [] @texttt // Hermite/Argyris: returns 1 if the global dof contains the d erivative along outward normal of K, -1 else[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 260--260 [] @texttt void dof_orientation(const geo_element& K, tiny_vector& or ientation) const;[] ) (../../nfem/lib/geo.3texi [55] Overfull \hbox (60.93126pt too wide) in paragraph at lines 90--90 [] @texttt for (geo::const_iterator_vertex i = g.begin_vertex(); i != g.end_n ode(); i++) {[] [56] Overfull \hbox (72.42863pt too wide) in paragraph at lines 102--102 [] @texttt for (geo::const_iterator_domain i = g.begin_domain(); i != i.end_d omain(); i++) {[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 126--126 [] @texttt void write_gnuplot_postscript_options (std::ostream& plot, const p lot_options& opt) const;[] Overfull \hbox (106.92076pt too wide) in paragraph at lines 144--144 [] @texttt explicit geo (const std::string& filename, const std::string& coor d_sys = "cartesian");[] [57] Overfull \hbox (20.69044pt too wide) in paragraph at lines 191--191 [] @texttt void build_subregion(const domain& start_from, const domain& dont_ cross,[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 193--193 [] @texttt // Builds a new domain on the side of domain `dont_cross' on whic h `start_from'[] [58] Overfull \hbox (112.66945pt too wide) in paragraph at lines 230--230 [] @texttt void localize_nearest (const point& x, point& y, geo_element::size _type& element) const;[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 231--231 [] @texttt bool trace (const point& x0, const point& v, point& x, Float& t, s ize_type& element) const;[] [59] Overfull \hbox (37.93651pt too wide) in paragraph at lines 249--249 [] @texttt normal (const class space& Nh, const domain& d, const interface& b c) const;[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 254--254 [] @texttt tangent (const class space& Nh, const domain& d, const interface& bc) const;[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 259--259 [] @texttt tangent_spline (const space& Nh, const domain& d, const interface& bc) const;[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 268--268 [] @texttt // Gives curvature of d in the (x,y) or (r,z) plane based on a s pline interpolation.[] Overfull \hbox (152.91026pt too wide) in paragraph at lines 272--272 [] @texttt // Gives curvature of d in the (x,y) or (r,z) plane based on a l ocal quadratic interpolation.[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 281--281 [] @texttt // Can also initialize orientation of domain through `bc' data s tructure.[] [60] Overfull \hbox (37.93651pt too wide) in paragraph at lines 305--305 [] @texttt void set_coordinate_system (const std::string&); // "cartesian", " rz", "zr"[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 307--307 [] @texttt void label_interface(const domain& dom1, const domain& dom2, const std::string& name);[] Overfull \hbox (112.66945pt too wide) in paragraph at lines 315--315 [] @texttt void init_localizer (const domain& boundary, Float tolerance=-1, i nt list_size=0) const;[] [61]) (../../nfem/lib/domain.3texi Overfull \hbox (106.92076pt too wide) in paragraph at lines 47--47 [] @texttt void set(IteratorElement p, size_type n, size_type dim, cons t std::string& name);[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 51--51 [] @texttt friend std::ostream& operator << (std::ostream& s, const domai n& d);[] [62] Overfull \hbox (89.6747pt too wide) in paragraph at lines 53--53 [] @texttt std::ostream& put_vtk (std::ostream& vtk, Vector::const _iterator first_p,[] ) (../../nfem/basis/point.3texi Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [] @texttt explicit basic_point () { _x[0] = T(); _x[1] = T(); _x[2] = T(); }[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 39--39 [] @texttt { _x[0] = p._x[0]; _x[1] = p._x[1]; _x[2] = p._x[2]; return *this; }[] [63] Overfull \hbox (14.94176pt too wide) in paragraph at lines 43--43 [] @texttt T& operator[](int i_coord) { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 44--44 [] @texttt const T& operator[](int i_coord) const { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 45--45 [] @texttt T& operator()(int i_coord) { return _x[i_coord% 3]; }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 46--46 [] @texttt const T& operator()(int i_coord) const { return _x[i_coord% 3]; }[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 75--75 [] @texttt friend bool operator == (const basic_point& u, const basi c_point& v)[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 79--79 [] @texttt { _x[0] += v[0]; _x[1] += v[1]; _x[2] += v[2]; retur n *this; }[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 82--82 [] @texttt { _x[0] -= v[0]; _x[1] -= v[1]; _x[2] -= v[2]; retur n *this; }[] [64] Overfull \hbox (112.66945pt too wide) in paragraph at lines 90--90 [] @texttt friend basic_point operator+ (const basic_point& u, co nst basic_point& v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 91--91 [] @texttt { return basic_point (u[0]+v[0], u[1]+v[1], u[2]+ v[2]); }[] Overfull \hbox (112.66945pt too wide) in paragraph at lines 96--96 [] @texttt friend basic_point operator- (const basic_point& u, co nst basic_point& v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 97--97 [] @texttt { return basic_point (u[0]-v[0], u[1]-v[1], u[2]- v[2]); }[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 100--100 [] @texttt friend basic_point operator* (const T1& a, const basic_po int& u)[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 106--106 [] @texttt friend basic_point operator/ (const basic_point& u, co nst T& a)[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 109--109 [] @texttt friend basic_point operator/ (const basic_point& u, ba sic_point v)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 110--110 [] @texttt { return basic_point (u[0]/v[0], u[1]/v[1], u[2]/ v[2]); }[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 112--112 [] @texttt friend basic_point vect (const basic_point& v, const b asic_point& w)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 129--129 [] @texttt friend T dist2 (const basic_point& x, const basic_point< T>& y)[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 132--132 [] @texttt friend T dist (const basic_point& x, const basic_point& y)[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 135--135 [] @texttt friend T dist_infty (const basic_point& x, const basic_p oint& y)[] [65] Overfull \hbox (32.18782pt too wide) in paragraph at lines 137--137 [] @texttt max(_my_abs(x[1]-y[1]), _my_abs(x[2]-y[ 2]))); }[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 149--149 []@texttt T mixt (const basic_point& u, const basic_point& v, const basi c_point& w);[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 151--151 []@texttt // robust(exact) floating point predicates: return value as (0, > 0, < 0)[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 160--160 [] @texttt const basic_point& c, const basic_point& x = basic_poi nt());[] ) (../../nfem/basis/tensor.3texi [66] Overfull \hbox (43.6852pt too wide) in paragraph at lines 54--54 [] @texttt friend std::ostream& operator << (std::ostream& out, const t ensor& a);[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 78--78 [] @texttt friend Float dist2 (const tensor& a, const tensor& b) { retu rn norm2(a-b); }[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 79--79 [] @texttt friend Float norm (const tensor& a) { return ::sqrt(norm2(a )); }[] [67] Overfull \hbox (72.42863pt too wide) in paragraph at lines 80--80 [] @texttt friend Float dist (const tensor& a, const tensor& b) { retu rn norm(a-b); }[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 89--89 [] @texttt // where q=(q1,q2,q3) are eigenvectors in rows (othonormal m atrix)[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 90--90 [] @texttt // and d=(d1,d2,d3) are eigenvalues, sorted in decreasing order d1 >= d2 >= d3[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 98--98 [] @texttt // where u=(u1,u2,u3) are left pseudo-eigenvectors in rows ( othonormal matrix)[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 99--99 [] @texttt // v=(v1,v2,v3) are right pseudo-eigenvectors in rows (othonormal matrix)[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 100--100 [] @texttt // and s=(s1,s2,s3) are eigenvalues, sorted in decreasing order s1 >= s2 >= s3[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 112--112 []@texttt void cumul_otimes (tensor& t, const point& a, const point& b, size_t na = 3);[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 113--113 []@texttt void cumul_otimes (tensor& t, const point& a, const point& b, size_t na, size_t nb);[] ) (../../skit/lib/ic0.3texi [68]) (../../skit/lib/ssk.3texi [69] [70]) (../../skit/lib/permutation.3texi [71]) (../../skit/lib/vec.3texi [72] Overfull \hbox (135.6642pt too wide) in paragraph at lines 106--106 [] @texttt explicit vec (unsigned int n = 0, const T& init_value = std: :numeric_limits::max())[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 117--117 [] @texttt vec(const VExpr& x) : Array(x.size()) { assign (*this, x); }[] [73] Overfull \hbox (43.6852pt too wide) in paragraph at lines 121--121 [] @texttt { logmodif(*this); return assign (*t his, x); }[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 126--126 []@texttt template std::ostream& operator << (std::ostream&, const v ec&);[] ) (../../skit/lib/diag.3texi [74]) (../../skit/lib/csr.3texi [75] [76]) (../../util/lib/iorheo.3texi [77]) (../../util/lib/rheostream.3texi [78] Overfull \hbox (78.17732pt too wide) in paragraph at lines 133--133 [] @texttt irheostream(const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 135--135 [] @texttt void open (const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 143--143 [] @texttt orheostream(const std::string& name, const std::string& suffix = std::string());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 145--145 [] @texttt void open (const std::string& name, const std::string& suffix = std::string());[] [79] Overfull \hbox (49.43388pt too wide) in paragraph at lines 160--160 []@texttt std::string delete_suffix (const std::string& name, const std::strin g& suffix);[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 169--169 []@texttt std::string get_full_name_from_rheo_path (const std::string& rootnam e, const std::string& suffix);[] ) (../../util/lib/Vector.3texi [80] [81] Overfull \hbox (49.43388pt too wide) in paragraph at lines 103--103 [] @texttt void insert (iterator position, const_iterator first, const_iter ator last);[] ) (../../util/lib/catchmark.3texi Overfull \hbox (55.18257pt too wide) in paragraph at lines 26--26 [] @texttt friend std::istream& operator >> (std::istream& is, const ca tchmark& m);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 27--27 [] @texttt friend std::ostream& operator << (std::ostream& os, const ca tchmark& m);[] ) Chapter 6 [82] [83] [84] (../../nfem/lib/riesz_representer.5texi) (../../nfem/lib/newton.5texi [85] Overfull \hbox (118.41814pt too wide) in paragraph at lines 40--40 []@texttt int newton (Problem P, Field& uh, Float& tol, size_t& max_iter, std: :ostream *p_cerr = 0) {[] ) (../../nfem/lib/damped-newton.5texi [86] Overfull \hbox (124.16682pt too wide) in paragraph at lines 41--41 []@texttt int damped_newton (Problem P, Field& u, Real& tol, Size& max_iter, s td::ostream* p_cerr=0) {[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 42--42 [] @texttt return damped_newton(P, newton_identity_preconditioner(), u, tol, max_iter, p_cerr);[] ) (../../skit/lib/pminres.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (89.6747pt too wide) in paragraph at lines 13--13 [] @texttt int pminres (const Matrix &A, Vector &x, const Vector &b, const Preconditioner &M,[] [87] Overfull \hbox (72.42863pt too wide) in paragraph at lines 62--62 []@texttt template [] Overfull \hbox (66.67995pt too wide) in paragraph at lines 63--63 []@texttt int pminres(const Matrix &A, Vector &x, const Vector &Mb, const Prec onditioner &M,[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 64--64 [] @texttt Size &max_iter, Real &tol, std::ostream *p_cerr = 0, std::string l abel = "minres")[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 74--74 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 75--75 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] 0 " << norm_r/norm_b < < std::endl;[] [88] [89] Overfull \hbox (124.16682pt too wide) in paragraph at lines 135--135 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << nor m_r/norm_b << std::endl;[] ) (../../skit/lib/puzawa.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (83.92601pt too wide) in paragraph at lines 13--13 [] @texttt int puzawa (const Matrix &A, Vector &x, const Vector &b, const P reconditioner &M,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14--14 [] @texttt int &max_iter, Real &tol, const Real& rho, std::ostream *p_cer r=0);[] [90] Overfull \hbox (78.17732pt too wide) in paragraph at lines 58--58 []@texttt template < class Matrix, class Vector, class Preconditioner, class R eal, class Size>[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 59--59 []@texttt int puzawa(const Matrix &A, Vector &x, const Vector &Mb, const Preco nditioner &M,[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 67--67 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (193.15108pt too wide) in paragraph at lines 72--72 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << sqrt(norm2_r/norm2_b) << std::endl;[] ) (../../skit/lib/gmres.5texi Overfull \hbox (60.93126pt too wide) in paragraph at lines 14--14 [] @texttt const Preconditioner &M, Matrix &H, Int m, Int &max_iter , Real &tol);[] [91] Overfull \hbox (98.24414pt too wide) in paragraph at lines 91--94 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . [92] [93] [94]) (../../skit/lib/pcg.5texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 12--12 [] @texttt template [] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14--14 [] @texttt const Preconditioner &M, int &max_iter, Real &tol, std::ostrea m *p_cerr=0);[] [95] Overfull \hbox (98.24414pt too wide) in paragraph at lines 66--70 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . Overfull \hbox (78.17732pt too wide) in paragraph at lines 75--75 []@texttt template < class Matrix, class Vector, class Preconditioner, class R eal, class Size>[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 76--76 []@texttt int pcg(const Matrix &A, Vector &x, const Vector &Mb, const Precondi tioner &M,[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 77--77 [] @texttt Size &max_iter, Real &tol, std::ostream *p_cerr = 0, std::st ring label = "cg")[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 84--84 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] #iteration residue" << std::endl;[] Overfull \hbox (204.64845pt too wide) in paragraph at lines 90--90 [] @texttt if (p_cerr) (*p_cerr) << "[" << label << "] " << n << " " << ::sqrt(norm2_r/norm2_b) << std::endl;[] ) (../../skit/lib/qmr.5texi [96] Overfull \hbox (98.24414pt too wide) in paragraph at lines 75--78 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . ) (../../skit/lib/bicgstab.5texi [97] Overfull \hbox (98.24414pt too wide) in paragraph at lines 58--61 @textrm The present im-ple-men-ta-tion is in-spired from @texttt IML++ 1.2[] @t extrm it-er-a-tive method li-brary, @texttt http://math.nist.gov/iml++[]@textrm . ) (../../skit/lib/mixed_solver.5texi Overfull \hbox (175.90501pt too wide) in paragraph at lines 20--20 [] @texttt template [] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21--21 [] @texttt int pcg_abtb (const Matrix& A, const Matrix& B, Vector& u, Vecto r& p,[] [98] Overfull \hbox (175.90501pt too wide) in paragraph at lines 26--26 [] @texttt template [] Overfull \hbox (118.41814pt too wide) in paragraph at lines 27--27 [] @texttt int pcg_abtbc (const Matrix& A, const Matrix& B, const Matrix& C , Vector& u, Vector& p,[] ) Chapter 7 [99] [100] (../../nfem/form_element/d_dx.7texi) (../../nfem/form_element/2W.7texi [101]) (../../nfem/form_element/2D.7texi) (../../nfem/form_element/convect.7texi) (../../nfem/form_element/div_div.7texi [102]) (../../nfem/form_element/inv_mass.7texi [103]) (../../nfem/form_element/mass.7texi Overfull \hbox (26.43913pt too wide) in paragraph at lines 24--24 [] @texttt form (const space& V, const space& V, "mass", const domain& gamma);[] [104]) (../../nfem/form_element/div.7texi [105]) (../../nfem/form_element/d_ds.7texi) (../../nfem/form_element/curl.7texi [106]) (../../nfem/form_element/d2_ds2.7texi) (../../nfem/form_element/grad.7texi [107]) (../../nfem/form_element/grad_grad.7texi) (../../nfem/form_element/2D_D.7texi [108]) Chapter 8 [109] [110] (../../nfem/lib/form_element.9texi Overfull \hbox (118.41814pt too wide) in paragraph at lines 52--52 [] @texttt // for special forms for which coordinate-system specific w eights (ie, cylindrical[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 58--58 [] @texttt void operator() (const geo_element& K, ublas::matrix& m) const;[] ) (../../nfem/lib/iofem.9texi [111] Overfull \hbox (141.74222pt too wide) in paragraph at lines 24--24 [] @texttt cout << cut << origin(point(0.5, 0.5, 0.5)) << normal(po int(1,1,0) << uh;[] ) (../../nfem/lib/geomap.9texi [112] Overfull \hbox (66.67995pt too wide) in paragraph at lines 37--37 [] @texttt // Maps a quadrature-dependent lattice over Th_1 onto Th_2 triangulation.[] Overfull \hbox (221.89452pt too wide) in paragraph at lines 39--39 [] @texttt std::string quadrature="default", size_t ord er=0, bool allow_approximate_edges=true);[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 41--41 [] @texttt // Maps a quadrature-dependent lattice over Th_1 onto Th_2 triangulation[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 43--43 [] @texttt geomap (const geo& Th_2, const geo& Th_1, const field& advec tion_h_1,[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 44--44 [] @texttt std::string quadrature="default", size_t ord er=0) ;[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 47--47 [] @texttt // Maps space Vh_1 dof's onto the meshpoints of Th_2 triang ulation[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 52--52 [] @texttt // Same but for P1d, using points inside the triangle to pr eserve discontinuity[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 57--57 [] @texttt // Maps space Vh_1 dof's onto the meshpoints of Th_2 triang ulation[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 61--61 [] @texttt geomap (const geo& Th_2, const space& Vh_1, const field& adv ection_h_1);[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 63--63 [] @texttt // Does the same, but assumes that Th_2 is the triangulatio n for Vh_1[] Overfull \hbox (273.6327pt too wide) in paragraph at lines 64--64 [] @texttt geomap (const space& Vh_2, const field& advection_h_1, const geomap_option_type& opts = geomap_option_type());[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 72--72 [] @texttt { if (!use_space) error_macro("Lattice-based geomaps use no space");[] [113] Overfull \hbox (89.6747pt too wide) in paragraph at lines 100--100 [] @texttt bool no_barycentric_weight() const { return _barycentric_wei ght == Float(0); }[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 110--110 [] @texttt meshpoint robust_advect_1 (const point& x0, const point& va, bool& is_inside) const;[] Overfull \hbox (279.3814pt too wide) in paragraph at lines 111--111 [] @texttt meshpoint robust_advect_N (const point& x0, const point& v0, const field& vh, size_t n, bool& is_inside) const;[] [114] Overfull \hbox (37.93651pt too wide) in paragraph at lines 138--138 []@texttt geomap::geomap (const geo& Th_2, const space& Vh_1, const field& adv ection) :[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 139--139 [] @texttt _Th_1 (Vh_1.get_geo()), _Th_2 (Th_2), _advection(advection), advected(true),[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 146--146 []@texttt geomap::geomap (const space& Vh_1, const field& advection, const geo map_option_type& opt) :[] Overfull \hbox (135.6642pt too wide) in paragraph at lines 147--147 [] @texttt _Th_1 (Vh_1.get_geo()), _Th_2 (Vh_1.get_geo()), _advection(a dvection), advected(true),[] Overfull \hbox (89.6747pt too wide) in paragraph at lines 175--175 [] @texttt error_macro("The advection field should be defined on the or iginal mesh Th_1="[] [115] Overfull \hbox (20.69044pt too wide) in paragraph at lines 176--176 [] @texttt << Th_1.name() << " and not " << _advection.get_geo().na me());[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 204--204 []@texttt /* f being a field of space V, X a geomap on this space, foX=compos e(f,X) is their[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 211--211 []@texttt field compose (const field& f, const geomap& g, Float (*f_outside)(c onst point&));[] [116]) (../../nfem/lib/characteristic.9texi [117] Overfull \hbox (14.94176pt too wide) in paragraph at lines 57--57 [] @texttt field_o_characteristic(const field& fh, const characteristic & X);[] ) (../../nfem/basis/geo_element.9texi [118] [119] Overfull \hbox (89.6747pt too wide) in paragraph at lines 76--76 [] @texttt void build_subgeo(size_type subgeo_dim, size_type i_subgeo, geo_ element& S) const;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 98--98 [] @texttt friend std::ostream& operator << (std::ostream&, const geo_eleme nt&);[] ) (../../nfem/basis/prism.9texi [120] [121]) (../../nfem/basis/edge.9texi) (../../nfem/basis/tetra.9texi [122]) (../../nfem/basis/quadrature.9texi [123] Overfull \hbox (20.69044pt too wide) in paragraph at lines 68--68 [] @texttt mutable quadrature_on_geo _quad [reference_element::max_ size];[] ) (../../nfem/basis/reference_element.9texi [124] [125] Overfull \hbox (20.69044pt too wide) in paragraph at lines 81--81 [] @texttt size_type subgeo_size(size_type subgeo_dim, size_type i_subgeo) const;[] Overfull \hbox (221.89452pt too wide) in paragraph at lines 82--82 [] @texttt size_type subgeo_local_vertex(size_type subgeo_dim, size_type i_ subgeo, size_type i_subgeo_vertex) const;[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 104--104 [] @texttt static const size_type _subgeo_size [max_size*4*max_n_su bgeo];[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 105--105 [] @texttt static const size_type _subgeo_local_vertex [max_size*4*max_n_su bgeo*max_subgeo_vertex];[] ) (../../nfem/basis/numbering.9texi [126] [127]) (../../nfem/basis/triangle.9texi) (../../nfem/basis/point.9texi [128]) (../../nfem/basis/basis.9texi Overfull \hbox (233.39189pt too wide) in paragraph at lines 49--49 [] @texttt size_type size (reference_element hat_K, dof_family_type famil y=reference_element::dof_family_max) const;[] [129]) (../../nfem/basis/hexa.9texi [130] [131]) (../../nfem/basis/quadrangle.9texi) (../../util/lib/heap_allocator.9texi [132] Overfull \hbox (147.16158pt too wide) in paragraph at lines 20--20 [] @texttt typedef map , heap_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24--24 [] @texttt for (map_type::iterator iter = a.begin(), last = a.end(); iter ! = last; iter++) {[] [133] Overfull \hbox (14.94176pt too wide) in paragraph at lines 60--60 [] @texttt : handler ((typename heap_allocator::handler_type*)(ha.hand ler))[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 88--88 [] @texttt size_type max_size() const { return std::numeric_limits::max() / sizeof(T); }[] [134]) (../../util/lib/pretty_name.9texi Overfull \hbox (135.6642pt too wide) in paragraph at lines 16--16 [] @texttt typedef map , heap_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 24--24 []@texttt /// @brief get string from a type, with an optional pretty-printing for complex types[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 29--29 []@texttt template std::string typename_of (T x) { return typename_macro(T); }[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 30--30 []@texttt template std::string pretty_typename_of (T x) { return pre tty_typename_macro(T); }[] ) (../../util/lib/smart_pointer.9texi [135] [136]) (../../util/lib/stack_allocator.9texi Overfull \hbox (35.10944pt too wide) in paragraph at lines 16--19 @textrm ex-cep-tion is em-mited. For a non-limited mem-ory han-dler in the same spirit, see @texttt "@textrm heap[]allocator@texttt "@textrm (9). Overfull \hbox (72.42863pt too wide) in paragraph at lines 24--24 [] @texttt stack_allocator stack_alloc (stack.begin().operator->(), stack.size());[] Overfull \hbox (152.91026pt too wide) in paragraph at lines 25--25 [] @texttt typedef map , stack_allocator > > map_type;[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 29--29 [] @texttt for (map_type::iterator iter = a.begin(), last = a.end(); iter ! = last; iter++) {[] [137] Overfull \hbox (20.69044pt too wide) in paragraph at lines 70--70 [] @texttt : handler ((typename stack_allocator::handler_type*)(sa.han dler))[] [138] Overfull \hbox (129.91551pt too wide) in paragraph at lines 99--99 [] @texttt size_type max_size() const { return std::numeric_limits::max() / sizeof(T); }[] [139] Overfull \hbox (43.6852pt too wide) in paragraph at lines 161--161 [] @texttt warning_macro ("stack_allocator::mem_info cstori: size="<< max_size);[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 165--165 [] @texttt warning_macro ("stack_allocator::mem_info dstor: size="<& lhs, const stack_allocat or& rhs) throw()[] Overfull \hbox (101.17207pt too wide) in paragraph at lines 178--178 []@texttt bool operator!=( const stack_allocator& lhs, const stack_allocat or& rhs) throw()[] ) (../../config/acinclude.9texi [140] Overfull \hbox (17.42508pt too wide) in paragraph at lines 107--118 []@textrm Check to see if spooles li-brary and head-ers ex-ists. If so, set the shell vari-able @texttt "@textrm rheo[]have[]spooles@texttt " Overfull \hbox (24.59909pt too wide) in paragraph at lines 107--118 @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]SPOOLES and su b-stitues IN-CLUDES[]SPOOLES and LADD[]SPOOLES [141] Overfull \hbox (29.95679pt too wide) in paragraph at lines 122--133 []@textrm Check to see if umf-pack li-brary and head-ers ex-ists. If so, set th e shell vari-able @texttt "@textrm rheo[]have[]umfpack@texttt " Overfull \hbox (40.56772pt too wide) in paragraph at lines 122--133 @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]UMFPACK and su b-stitues IN-CLUDES[]UMFPACK and LADD[]UMFPACK Overfull \hbox (33.95523pt too wide) in paragraph at lines 137--148 @textrm ex-ists. If so, set the shell vari-able @texttt rheo_have_malloc_dbg[] @textrm to @texttt "@textrm yes@texttt "@textrm , de-fines HAVE[]MALLOC[]DBG, Overfull \hbox (37.5711pt too wide) in paragraph at lines 155--160 []@textrm Check whether the dmal-loc pack-age ex-ists and set the cor-re-spond- ing shell value @texttt "@textrm rheo[]have[]dmalloc@texttt " Overfull \hbox (10.89465pt too wide) in paragraph at lines 155--160 @textrm and HAVE[]DMALLOC (in Make-file.am and con-fig.h) ac-cord-ingly, cre-at e LDADD[]DMALLOC [142] [143] [144] Overfull \hbox (18.00768pt too wide) in paragraph at lines 372--377 []@textrm Check wheter we are us-ing CRAY C@texttt ++ @textrm com-piler. If so, set the shell vari-able @texttt "@textrm ac[]cv[]prog[]cray[]cc@texttt " Overfull \hbox (5.96268pt too wide) in paragraph at lines 380--386 []@textrm Check wheter we are us-ing DEC C@texttt ++ @textrm com-piler. If so, set the shell vari-able @texttt "@textrm ac[]cv[]prog[]dec[]cc@texttt " Overfull \hbox (83.07622pt too wide) in paragraph at lines 398--406 []@textrm If so, sub-stitue REC-OG-NIZED[]CXX to a spe-cific com-piler's rule f ile, e.g, @texttt "@textrm $@texttt {@textrm top[]srcdir@texttt }@textrm /confi g/gnu[]cxx.mk@texttt "@textrm , [145])) (./FAQ.texi Chapter 9 [146] Overfull \hbox (10.36597pt too wide) in paragraph at lines 77--82 []@textrm the au-to-mat-i-cally gen-er-ated script, scan the ma-chine and tran s-late `@texttt config.h.in[]@textrm '[], [147] [148]) (./gpl.texi Appendix @char @appendixno [149] [150] Underfull \hbox (badness 2368) in paragraph at lines 63--63 []@secrm TERMS AND CON-DI-TIONS FOR COPY-ING, [151] [152] [153] [154] [155] [156]) (Concept Index) [157] [158] (./rheolef.cps [159]) (Program Index) [160] (./rheolef.pgs) (Class Index) [161] [162] (./rheolef.cls) (Form Index) [163] [164] (./rheolef.bfs) (Approximation Index) [165] [166] (./rheolef.aps) (Function Index) [167] [168] (./rheolef.fns) (File Format Index) [169] [170] (./rheolef.fis) (Related Tool Index) [171] [172] (./rheolef.tos [173]) [174] (./rheolef.toc) [-1] [-2] (./rheolef.toc [-3] [-4] [-5]) [-6] ) (see the transcript file for additional information) Output written on rheolef.pdf (182 pages, 460599 bytes). Transcript written on rheolef.log. /bin/bash /«PKGBUILDDIR»/config/install-sh -d "/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef" if test -f rheolef.pdf; then /bin/sh ../../config/install-sh -c -m 644 rheolef.pdf "/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef/rheolef-refman.pdf"; fi /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef' /bin/sh ../../config/install-sh -c -m 644 rheolef.html '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/info' /bin/sh ../../config/install-sh -c -m 644 ./rheolef.info '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/info' install-info --info-dir='/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/info' '/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/info/rheolef.info' This is not dpkg install-info anymore, but GNU install-info See the man page for ginstall-info for command line arguments make install-data-hook if test -f "/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef/rheolef.html"; then mv "/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef/rheolef.html" "/«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef/rheolef-refman.html"; fi Making install in usrman make[4]: Nothing to be done for `install-exec-am'. cat dirichlet-nh-error.cc | col -b -x | ../../config/doc2texi -latex -file doc/usrman/dirichlet-nh-error.cc > dirichlet-nh-error.ctex cat d-dx.cc | col -b -x | ../../config/doc2texi -latex -file doc/usrman/d-dx.cc > d-dx.ctex cat demo2-error-grad.cc | col -b -x | ../../config/doc2texi -latex -file doc/usrman/demo2-error-grad.cc > demo2-error-grad.ctex cat crack.cc | col -b -x | ../../config/doc2texi -latex -file doc/usrman/crack.cc > crack.ctex Updating version.tex if test x"YES" = x"YES"; then \ echo "\\usepackage{hyperref}" > have_hyperref.tex; \ else \ echo "\\newcommand{\url}[1]{{\\tt {#1}}}" > have_hyperref.tex; \ fi /bin/rm -f usrman.aux usrman.idx usrman.ind /bin/rm -f usrman.toc usrman.lot usrman.lof if test x"latex" != x"" -a x"bibtex" != x"" \ -a x"makeindex" != x""; then \ TEXINPUTS=":.:./:$TEXINPUTS"; \ BIBINPUTS=":.:./:$TEXINPUTS"; \ export TEXINPUTS BIBINPUTS; \ rm -f usrman.idx; \ rm -f usrman.bbl usrman.aux usrman.toc usrman.lof; \ rm -f usrman.cnd usrman.exd usrman.fod usrman.prd; \ rm -f usrman.cnx usrman.exx usrman.fox usrman.prx; \ pdflatex usrman \ && bibtex usrman \ && makeindex -o usrman.cnd usrman.cnx \ && makeindex -o usrman.fod usrman.fox \ && makeindex -o usrman.exd usrman.exx \ && makeindex -o usrman.prd usrman.prx \ && pdflatex usrman \ && pdflatex usrman \ && pdflatex usrman \ && (grep Warning usrman.log | \ grep -v -e 'Foreign command' -e 'hyperref' || true) \ && test `grep Warning usrman.log | \ grep -v -i -e 'float' \ -e 'Foreign command' \ -e 'hyperref' \ -e 'minitoc' \ -e 'has changed' \ | wc -l` -eq 0; \ else \ true; \ fi This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (./usrman.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. 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(/usr/share/texlive/texmf-dist/tex/context/base/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./version.tex) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) Overfull \hbox (96.07477pt too wide) in paragraph at lines 107--111 [][] [0{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map} <./dirichlet-3d-mayavi-mi x-fig.png> <./streamf-cavity-3d-fig.png (PNG copy)>] Underfull \vbox (badness 10000) has occurred while \output is activepdfTeX warn ing (ext4): destination with the same identifier (name{page.0}) has been alread y used, duplicate ignored \relax l.127 \vfill [0] (./introduction.tex Underfull \hbox (badness 10000) in paragraph at lines 59--61 []\OT1/cmr/m/n/10 Please send all com-ments and bug re-ports by elec-tronic mai l to ) [1] Underfull \vbox (badness 10000) has occurred while \output is active [2] [3] [4] [5] [6] (./dirichlet.tex Chapter 1. LaTeX Warning: Citation `brenner-scott-91' on page 7 undefined on input line 5. Underfull \vbox (badness 1466) has occurred while \output is active [7] [8] [9] [10] Overfull \hbox (51.4995pt too wide) in paragraph at lines 322--326 [] Underfull \vbox (badness 10000) has occurred while \output is active [11 <./dir ichlet-2d-P1.pdf> <./dirichlet-2d-P2.pdf>] LaTeX Warning: Reference `fig-dirichlet-2d-alt' on page 12 undefined on input l ine 335. LaTeX Warning: Reference `fig-dirichlet-3d' on page 12 undefined on input line 344. LaTeX Warning: Reference `fig-anaglyph-glasses' on page 12 undefined on input l ine 347. Underfull \hbox (badness 10000) in paragraph at lines 355--361 []\OT1/cmr/m/n/10 See \OT1/cmtt/m/n/10 http://en.wikipedia.org/wiki/Anaglyph[]i mage \OT1/cmr/m/n/10 for more and [12 <./dirichlet-2d-bw.pdf> <./dirichlet-2d-elevation.png> <./red-cyan-glasses. png (PNG copy)>] LaTeX Warning: Reference `fig-dirichlet-2d' on page 13 undefined on input line 370. 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[18] Overfull \hbox (47.90964pt too wide) in paragraph at lines 75--75 []\OT1/cmtt/m/n/10 Float f (const point& x) { return 1+(0.5/N)*(x[0]*(1-x[0])+x [1]*(1-x[1])+x[2]*(1-x[2])); }[] Overfull \hbox (11.15996pt too wide) in paragraph at lines 75--75 [] \OT1/cmtt/m/n/10 uh.u = fact.solve(m.uu*fh.u + m.ub*fh.b + mb.uu*gh.u + m b.ub*gh.b - a.ub*uh.b);[] Overfull \hbox (68.90945pt too wide) in paragraph at lines 75--75 [] \OT1/cmtt/m/n/10 int status = pcg (a.uu, uh.u, m.uu*fh.u + m.ub*fh.b + mb .uu*gh.u + mb.ub*gh.b - a.ub*uh.b,[] [19] Overfull \hbox (11.15996pt too wide) in paragraph at lines 93--93 [] \OT1/cmtt/m/n/10 uh.u = fact.solve(m.uu*fh.u + m.ub*fh.b + mb.uu*gh.u + m b.ub*gh.b - a.ub*uh.b); ) (./robin.tex [20] Overfull \hbox (16.40991pt too wide) in paragraph at lines 67--67 []\OT1/cmtt/m/n/10 Float u_ex (const point& x) { return 0.5*(x[0]*(1-x[0]) + x[ 1]*(1-x[1]))/Float(N); }[] [21] Overfull \hbox (11.15996pt too wide) in paragraph at lines 67--67 [] \OT1/cmtt/m/n/10 uh.u = fact.solve(m.uu*fh.u + m.ub*fh.b + mb.uu*gh.u + m b.ub*gh.b - a.ub*uh.b);[] Overfull \hbox (68.90945pt too wide) in paragraph at lines 67--67 [] \OT1/cmtt/m/n/10 int status = pcg (a.uu, uh.u, m.uu*fh.u + m.ub*fh.b + mb .uu*gh.u + mb.ub*gh.b - a.ub*uh.b,[] ) (./neumann-laplace.tex [22] LaTeX Warning: Citation `girault-raviart-86' on page 23 undefined on input line 28. 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[33] Underfull \vbox (badness 10000) has occurred while \output is active [34] Overfull \hbox (38.20508pt too wide) in paragraph at lines 299--308 [] Underfull \vbox (badness 10000) has occurred while \output is active [35 <./emb ankment-2d-tensor-fig.png> <./embankment-3d-tensor-fig.png>] LaTeX Warning: Reference `fig-embankment-s01' on page 36 undefined on input lin e 318. Overfull \hbox (16.40991pt too wide) in paragraph at lines 333--333 [] \OT1/cmtt/m/n/10 ./stress < square-P1.mfield | mfield -s01 - | field -p roj -elevation -stereo - Overfull \hbox (16.40991pt too wide) in paragraph at lines 334--334 [] \OT1/cmtt/m/n/10 ./stress < square-P2.mfield | mfield -s01 - | field -p roj -elevation -stereo -[] LaTeX Warning: Reference `fig-embankment-s01' on page 36 undefined on input lin e 337. [36 <./embankment-2d-s01-P0-fig.pdf> <./embankment-2d-s01-P1d-elevation-fig.png > <./embankment-3d-s01-P0-fig.png> <./embankment-3d-s01-P1d-fig.png>] LaTeX Warning: Citation `roquet-michel-saramito-2000' on page 37 undefined on i nput line 355. LaTeX Warning: Citation `roquet' on page 37 undefined on input line 355. LaTeX Warning: Citation `bamg' on page 37 undefined on input line 355. LaTeX Warning: Citation `borouchaki-97' on page 37 undefined on input line 355. LaTeX Warning: Citation `castro-diaz-97' on page 37 undefined on input line 355 . LaTeX Warning: Citation `vallet' on page 37 undefined on input line 355. [37] Overfull \hbox (39.53334pt too wide) in paragraph at lines 414--421 [] Underfull \vbox (badness 10000) has occurred while \output is active [38] LaTeX Warning: Reference `fig-embankment-adapt-deformation' on page 39 undefine d on input line 447. ) (./stokes.tex [39 <./embankment-adapt-2d-P1-fig.pdf> <./embankment-adapt-2d-P 2-fig.pdf>] LaTeX Warning: Reference `fig-square-cube' on page 40 undefined on input line 3 2. LaTeX Warning: Reference `fig-square-cube' on page 40 undefined on input line 3 2. Overfull \hbox (18.84868pt too wide) in alignment at lines 44--63 [][][] [] LaTeX Warning: Citation `hood-taylor-73' on page 40 undefined on input line 66. [40] Underfull \hbox (badness 1616) in paragraph at lines 100--104 \OT1/cmr/m/n/10 This file is suit-able for a fu-ture reusage. Next, forms are d e-fined as usual, in file Underfull \vbox (badness 10000) has occurred while \output is active [41] LaTeX Warning: Citation `Kla-1998' on page 42 undefined on input line 136. 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[49] Overfull \hbox (11.15996pt too wide) in paragraph at lines 86--86 [] \OT1/cmtt/m/n/10 int status = pcg_abtbc (a.uu, b.uu, c.uu, uh.u, ph.u, -( a.ub*uh.b) + (mu*fh).u,[] Overfull \hbox (11.15996pt too wide) in paragraph at lines 86--86 [] \OT1/cmtt/m/n/10 int status = pcg_abtbc (a.uu, b.uu, c.uu, uh.u, ph.u, -( a.ub*uh.b) + (mu*fh).u,[] Overfull \hbox (0.66005pt too wide) in paragraph at lines 86--86 [] \OT1/cmtt/m/n/10 -(b.ub*uh.b), pcg_solver(mp.uu), pcg_solver(a.uu), m ax_iter, tol, &cerr);[] Underfull \vbox (badness 2142) has occurred while \output is active [50] LaTeX Warning: Reference `ref-pcg-abtb' on page 51 undefined on input line 110. Overfull \hbox (11.15996pt too wide) in paragraph at lines 113--113 [] \OT1/cmtt/m/n/10 int status = pcg_abtbc (a.uu, b.uu, c.uu, uh.u, ph.u, -( a.ub*uh.b) + (mu*fh).u, LaTeX Warning: Citation `Kla-1998' on page 51 undefined on input line 117. 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[59 <./heat-fig.png>]) (./convect.tex [60] LaTeX Warning: Citation `pironneau-88' on page 61 undefined on input line 66. LaTeX Warning: Citation `rui-tabata-2001' on page 61 undefined on input line 80 . [61] LaTeX Warning: Citation `musser-saini-1997' on page 62 undefined on input line 108. Overfull \hbox (14.90907pt too wide) in paragraph at lines 127--128 [] Underfull \vbox (badness 10000) has occurred while \output is active [62] LaTeX Warning: Reference `makefile' on page 63 undefined on input line 135. LaTeX Warning: Reference `sec-heat' on page 63 undefined on input line 146. LaTeX Warning: Reference `fig-convect' on page 63 undefined on input line 151. ) (./navier-stokes.tex [63 <./convect-fig.png (PNG copy)>] Overfull \hbox (15.38992pt too wide) detected at line 52 [] LaTeX Warning: Reference `sec-navier-stokes' on page 64 undefined on input line 55. LaTeX Warning: Reference `sec-navier-stokes' on page 64 undefined on input line 56. 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Overfull \hbox (5.91pt too wide) in paragraph at lines 186--186 []\OT1/cmtt/m/n/10 int navier_stokes_solve (Float Re, Float delta_t, field f0h, field& uh, field& ph,[] Overfull \hbox (79.40936pt too wide) in paragraph at lines 186--186 [] \OT1/cmtt/m/n/10 size_t& max_iter, Float& tol, std::ostream *p_cerr=0, st d::string label = "navier-stokes") {[] Overfull \hbox (26.90982pt too wide) in paragraph at lines 186--186 [] \OT1/cmtt/m/n/10 int status = pcg_abtb (a.uu, b.uu, uh.u, ph.u, (m*fh).u - a.ub*uh.b, -(b.ub*uh.b),[] [65] Overfull \hbox (105.65913pt too wide) in paragraph at lines 186--186 [] \OT1/cmtt/m/n/10 if (status != 0) warning_macro ("solve generalized stoke s: precision not reached: tol = " << tol)[] Overfull \hbox (16.40991pt too wide) in paragraph at lines 186--186 [] \OT1/cmtt/m/n/10 if (p_cerr != 0) *p_cerr << "[" << label << "] "<< n << " " << residual << endl;[] Overfull \hbox (26.90982pt too wide) in paragraph at lines 208--208 [] \OT1/cmtt/m/n/10 int status = pcg_abtb (a.uu, b.uu, uh.u, ph.u, (m*fh).u - a.ub*uh.b, -(b.ub*uh.b), LaTeX Warning: Citation `CahCha-1988' on page 66 undefined on input line 212. LaTeX Warning: Citation `KobOls-2000-precond-uzawa-stokes-gen' on page 66 undef ined on input line 213. LaTeX Warning: Reference `sec-neumann-laplace' on page 66 undefined on input li ne 229. LaTeX Warning: Reference `sec-neumann-laplace' on page 66 undefined on input li ne 230. [66] Overfull \hbox (68.90945pt too wide) in paragraph at lines 239--239 [] \OT1/cmtt/m/n/10 field c2 = sqr(field(two_Duh(0,0))) + sqr(field(two_Duh(1, 1))) + 2*sqr(field(two_Duh(0,1)));[] Overfull \hbox (63.6595pt too wide) in paragraph at lines 239--239 [] \OT1/cmtt/m/n/10 cerr << "usage: " << argv[0] << " < n_adapt> " << endl;[] [67] LaTeX Warning: Reference `ex-cavity-h' on page 68 undefined on input line 255. Overfull \hbox (4.41896pt too wide) in paragraph at lines 279--296 [][] [] [] Overfull \hbox (4.41896pt too wide) in paragraph at lines 300--311 [][] [] [] Underfull \vbox (badness 10000) has occurred while \output is active [68] Underfull \vbox (badness 10000) has occurred while \output is active [69 <./xsq uare-Re=100-geo.pdf> <./xsquare-Re=100-phi.pdf> <./xsquare-Re=400-geo.pdf> <./x square-Re=400-phi.pdf>] LaTeX Warning: Reference `ex-vorticity-cc' on page 70 undefined on input line 3 42. LaTeX Warning: Reference `ex-streamf-cavity-cc' on page 70 undefined on input l ine 343. LaTeX Warning: Reference `fig-navier-stokes' on page 70 undefined on input line 346. Overfull \hbox (43.71436pt too wide) in paragraph at lines 356--364 [][] LaTeX Warning: Citation `GhiGhiShi-1982' on page 70 undefined on input line 364 . LaTeX Warning: Citation `GhiGhiShi-1982' on page 70 undefined on input line 364 . 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LaTeX Warning: Citation `AutParQua-2002' on page 72 undefined on input line 438 . LaTeX Warning: Citation `ErtCorGok-2005' on page 72 undefined on input line 441 . LaTeX Warning: Citation `GelLubOlsSta-2005' on page 72 undefined on input line 443. LaTeX Warning: Citation `AutParQua-2002' on page 72 undefined on input line 445 . LaTeX Warning: Citation `MinEth-1998' on page 72 undefined on input line 446. ) [72] [73] [74] Chapter 6. (./transmission.tex [75] [76] Underfull \vbox (badness 10000) has occurred while \output is active [77] [78] LaTeX Warning: Reference `fig-transmission' on page 79 undefined on input line 292. ) [79 <./transmission-1d-fig.pdf>] [80] Chapter 7. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 195. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 195. (./p-laplacian.tex LaTeX Warning: Citation `brenner-scott-91' on page 81 undefined on input line 5 . LaTeX Warning: Citation `Bre-1983' on page 81 undefined on input line 49. [81] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) Overfull \hbox (0.66005pt too wide) in paragraph at lines 133--133 []\OT1/cmtt/m/n/10 int p_laplacian_fixed_point (Float p, field fh, field& uh, F loat& r, size_t& n) {[] [82] Underfull \vbox (badness 10000) has occurred while \output is active [83] LaTeX Warning: Reference `fig-p-laplacian' on page 84 undefined on input line 1 96. LaTeX Warning: Reference `fig-p-laplacian' on page 84 undefined on input line 1 98. [84 <./p-laplacian-square-p=1,1-elevation.pdf> <./p-laplacian-square-p=1,1-cut. pdf>] [85 <./p-laplacian-square-r2.pdf> <./p-laplacian -square-r1.pdf> <./p-laplacian-rate.pdf> <./p-laplacian-rate-log.pdf>] LaTeX Warning: Reference `fig-p-laplacian-rate' on page 86 undefined on input l ine 279. 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Rerun to get cross-references right. ) (see the transcript file for additional information)< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb> Output written on usrman.pdf (119 pages, 5007884 bytes). Transcript written on usrman.log. This is BibTeX, Version 0.99d (TeX Live 2012/dev/Debian) The top-level auxiliary file: usrman.aux The style file: unsrt.bst Database file #1: usrman.bib Warning--empty journal in arnold-brezzi-fortin-83 (There was 1 warning) This is makeindex, version 2.15 [TeX Live 2012/dev] (kpathsea + Thai support). Scanning input file usrman.cnx....done (242 entries accepted, 0 rejected). Sorting entries.....done (2174 comparisons). Generating output file usrman.cnd....done (231 lines written, 0 warnings). Output written in usrman.cnd. Transcript written in usrman.ilg. This is makeindex, version 2.15 [TeX Live 2012/dev] (kpathsea + Thai support). Scanning input file usrman.fox....done (18 entries accepted, 0 rejected). Sorting entries....done (76 comparisons). Generating output file usrman.fod....done (20 lines written, 0 warnings). Output written in usrman.fod. Transcript written in usrman.ilg. This is makeindex, version 2.15 [TeX Live 2012/dev] (kpathsea + Thai support). Scanning input file usrman.exx....done (46 entries accepted, 0 rejected). Sorting entries....done (256 comparisons). Generating output file usrman.exd....done (45 lines written, 0 warnings). Output written in usrman.exd. Transcript written in usrman.ilg. This is makeindex, version 2.15 [TeX Live 2012/dev] (kpathsea + Thai support). Scanning input file usrman.prx....done (51 entries accepted, 0 rejected). Sorting entries....done (311 comparisons). Generating output file usrman.prd....done (34 lines written, 0 warnings). Output written in usrman.prd. Transcript written in usrman.ilg. This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (./usrman.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. 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[81] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) Overfull \hbox (0.66005pt too wide) in paragraph at lines 133--133 []\OT1/cmtt/m/n/10 int p_laplacian_fixed_point (Float p, field fh, field& uh, F loat& r, size_t& n) {[] [82] Underfull \vbox (badness 10000) has occurred while \output is active [83] [84 <./p-laplacian-square-p=1,1-elevatio n.pdf> <./p-laplacian-square-p=1,1-cut.pdf>] [85 <./p-laplacian-square-r2.pdf> <./p-laplacian -square-r1.pdf> <./p-laplacian-rate.pdf> <./p-laplacian-rate-log.pdf>] Underfull \hbox (badness 10000) in paragraph at lines 349--354 [86] [87] [88] [89] [90 <./p-laplacian-newton-square-r1.pdf> <./p-laplacian-newton-square-r2.pdf>] LaTeX Warning: Citation `DenSch-1983' on page 91 undefined on input line 644. LaTeX Warning: Citation `PreTeuVetFla-1997-C-2ed' on page 91 undefined on input line 645. 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Ef-fec-tive pre-con- di-tion-ing of Uzawa type Underfull \hbox (badness 5374) in paragraph at lines 138--138 \OT1/cmr/m/n/10 schemes for a gen-er-al-ized Stokes prob-lem. \OT1/cmr/m/it/10 Nu-mer. Math.\OT1/cmr/m/n/10 , 86:443--470, 2000. Underfull \hbox (badness 3780) in paragraph at lines 151--151 \OT1/cmr/m/n/10 tions: streamfunction-velocity for-mu-la-tion. \OT1/cmr/m/it/1 0 J. Com-put. Phys.\OT1/cmr/m/n/10 , 207:52--68, 2005. [104]) [105] [106] [107] [108] (./how-to-mesh.tex Appendix A. LaTeX Warning: Citation `bamg' on page 109 undefined on input line 14. LaTeX Warning: Citation `gmsh' on page 109 undefined on input line 22. (./how-to-mesh-bamg.tex LaTeX Warning: Citation `bamg' on page 109 undefined on input line 14. 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Rerun to get cross-references right. ) (see the transcript file for additional information)< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb> Output written on usrman.pdf (130 pages, 5062872 bytes). Transcript written on usrman.log. This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (./usrman.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. 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(./heat.tex [57] Overfull \hbox (17.46867pt too wide) in paragraph at lines 88--89 [] Underfull \vbox (badness 10000) has occurred while \output is active [58] [59 <./heat-fig.png>]) (./convect.tex [60] [61] Overfull \hbox (14.90907pt too wide) in paragraph at lines 127--128 [] Underfull \vbox (badness 10000) has occurred while \output is active [62]) (./navier-stokes.tex [63 <./convect-fig.png (PNG copy)>] Overfull \hbox (15.38992pt too wide) detected at line 52 [] Overfull \hbox (65.0328pt too wide) detected at line 101 [] [64] Overfull \hbox (5.91pt too wide) in paragraph at lines 186--186 []\OT1/cmtt/m/n/10 int navier_stokes_solve (Float Re, Float delta_t, field f0h, field& uh, field& ph,[] Overfull \hbox (79.40936pt too wide) in paragraph at lines 186--186 [] \OT1/cmtt/m/n/10 size_t& max_iter, Float& tol, std::ostream *p_cerr=0, st d::string label = "navier-stokes") {[] Overfull \hbox (26.90982pt too wide) in paragraph at lines 186--186 [] \OT1/cmtt/m/n/10 int status = pcg_abtb (a.uu, b.uu, uh.u, ph.u, (m*fh).u - a.ub*uh.b, -(b.ub*uh.b),[] [65] Overfull \hbox (105.65913pt too wide) in paragraph at lines 186--186 [] \OT1/cmtt/m/n/10 if (status != 0) warning_macro ("solve generalized stoke s: precision not reached: tol = " << tol)[] Overfull \hbox (16.40991pt too wide) in paragraph at lines 186--186 [] \OT1/cmtt/m/n/10 if (p_cerr != 0) *p_cerr << "[" << label << "] "<< n << " " << residual << endl;[] Overfull \hbox (26.90982pt too wide) in paragraph at lines 208--208 [] \OT1/cmtt/m/n/10 int status = pcg_abtb (a.uu, b.uu, uh.u, ph.u, (m*fh).u - a.ub*uh.b, -(b.ub*uh.b), [66] Overfull \hbox (68.90945pt too wide) in paragraph at lines 239--239 [] \OT1/cmtt/m/n/10 field c2 = sqr(field(two_Duh(0,0))) + sqr(field(two_Duh(1, 1))) + 2*sqr(field(two_Duh(0,1)));[] Overfull \hbox (63.6595pt too wide) in paragraph at lines 239--239 [] \OT1/cmtt/m/n/10 cerr << "usage: " << argv[0] << " < n_adapt> " << endl;[] [67] Overfull \hbox (4.41896pt too wide) in paragraph at lines 279--296 [][] [] [] Overfull \hbox (4.41896pt too wide) in paragraph at lines 300--311 [][] [] [] Underfull \vbox (badness 10000) has occurred while \output is active [68] Underfull \vbox (badness 10000) has occurred while \output is active [69 <./xsq uare-Re=100-geo.pdf> <./xsquare-Re=100-phi.pdf> <./xsquare-Re=400-geo.pdf> <./x square-Re=400-phi.pdf>] Overfull \hbox (43.71436pt too wide) in paragraph at lines 356--364 [][] [70 <./xsquare-Re=1000-geo.pdf> <./xsquare-Re=1000-phi.pdf>] [71 <./navier-stok es-cut-u0.pdf> <./navier-stokes-cut-u1.pdf>]) [72] [73] [74] Chapter 6. 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(./p-laplacian.tex [81] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd ) Overfull \hbox (0.66005pt too wide) in paragraph at lines 133--133 []\OT1/cmtt/m/n/10 int p_laplacian_fixed_point (Float p, field fh, field& uh, F loat& r, size_t& n) {[] [82] Underfull \vbox (badness 10000) has occurred while \output is active [83] [84 <./p-laplacian-square-p=1,1-elevatio n.pdf> <./p-laplacian-square-p=1,1-cut.pdf>] [85 <./p-laplacian-square-r2.pdf> <./p-laplacian -square-r1.pdf> <./p-laplacian-rate.pdf> <./p-laplacian-rate-log.pdf>] Underfull \hbox (badness 10000) in paragraph at lines 349--354 [86] [87] [88] [89] [90 <./p-laplacian-newton-square-r1.pdf> <./p-laplacian-newton-square-r2.pdf>] [91] [92] [93 <./p-laplacian-damped-newton- square-r2.pdf> <./p-laplacian-damped-newton-square-r1.pdf>] Overfull \hbox (28.6581pt too wide) in paragraph at lines 808--826 [][] ) [94 <./p-laplacian-newton-p=1,7.pdf> <./p-laplacian-newton-p=1,6.pdf> <./p-la placian-newton-p=1,5.pdf> <./p-laplacian-damped-newton-p=1,5.pdf>] Chapter 8. (./dirichlet-nh-error.ctex [95] Overfull \hbox (52.90381pt too wide) in paragraph at lines 81--86 [] ) (./d-dx.ctex [96 <./demo2-P1-uniform.pdf> <./demo2-P2-uniform.pdf>]) (./demo2-error-grad.ctex Overfull \hbox (52.90381pt too wide) in paragraph at lines 19--24 [] [97]) (./crack.ctex [98 <./demo2-P1-uniform-grad.pdf> <./demo2-P2-uniform-grad. pdf>] [99 <./crack-fig.pdf>] [100] Overfull \hbox (52.90381pt too wide) in paragraph at lines 132--137 [] Package amsmath Warning: Foreign command \over; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 150. ) Underfull \vbox (badness 10000) has occurred while \output is active [101 <./cr ack-P1-uniform.pdf> <./crack-P2-uniform.pdf>] (./usrman.bbl (./usrman.brf) [102] Underfull \hbox (badness 10000) in paragraph at lines 25--25 []\OT1/cmr/m/n/10 C. C. Paige and M. A. Saun-ders. So-lu-tion of sparse in-def -i-nite sys- Underfull \hbox (badness 10000) in paragraph at lines 25--25 \OT1/cmr/m/n/10 tems of lin-ear equa-tions. \OT1/cmr/m/it/10 SIAM J. Nu-mer. A nal.\OT1/cmr/m/n/10 , 12(4):617--629, 1975. [103] Underfull \hbox (badness 1648) in paragraph at lines 138--138 []\OT1/cmr/m/n/10 G. M. Ko-belkov and M. A. Ol-shan-skii. Ef-fec-tive pre-con- di-tion-ing of Uzawa type Underfull \hbox (badness 5374) in paragraph at lines 138--138 \OT1/cmr/m/n/10 schemes for a gen-er-al-ized Stokes prob-lem. \OT1/cmr/m/it/10 Nu-mer. Math.\OT1/cmr/m/n/10 , 86:443--470, 2000. Underfull \hbox (badness 3780) in paragraph at lines 151--151 \OT1/cmr/m/n/10 tions: streamfunction-velocity for-mu-la-tion. \OT1/cmr/m/it/1 0 J. Com-put. Phys.\OT1/cmr/m/n/10 , 207:52--68, 2005. [104]) [105] [106] [107] [108] (./how-to-mesh.tex Appendix A. (./how-to-mesh-bamg.tex [109] No file my-square-cut.bamgcad. ) (./how-to-mesh-gmsh.tex Overfull \hbox (45.47188pt too wide) in paragraph at lines 9--15 [][] Underfull \vbox (badness 10000) has occurred while \output is active [110] [111 <./square-gmsh-geo.pdf> <./cube-gmsh-geo.png>] [112])) (./fdl.tex [113] [114] Appendix B. Underfull \hbox (badness 10000) in paragraph at lines 7--8 [115] [116] [117] [118] [119]) (./usrman.cnd [120] [121] [122]) (./usrman.fod [123]) (./usrman.exd [124]) (./usrman.prd [125]) [126] (./usrman.lof [127]) [128] (./usrman.aux) ) (see the transcript file for additional information)< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb> Output written on usrman.pdf (130 pages, 5067438 bytes). Transcript written on usrman.log. This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (./usrman.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/pdftex-def/pdftex.def (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/infwarerr.sty) (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ltxcmds.sty)))) (./a4wide.sty (./a4.sty)) (./index.sty LaTeX Warning: Command \markboth has changed. Check if current package is valid. LaTeX Warning: Command \markright has changed. Check if current package is valid. ) (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texlive/texmf-dist/tex/latex/float/float.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/color.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/cite/cite.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty)) (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/backref.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)) Package hyperref Message: Driver (autodetected): hpdftex. (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def) (./usrman.aux) (/usr/share/texlive/texmf-dist/tex/context/base/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./usrman.out) (./usrman.out) (./version.tex) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) Overfull \hbox (96.07477pt too wide) in paragraph at lines 107--111 [][] [0{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map} <./dirichlet-3d-mayavi-mi x-fig.png> <./streamf-cavity-3d-fig.png (PNG copy)>] Underfull \vbox (badness 10000) has occurred while \output is activepdfTeX warn ing (ext4): destination with the same identifier (name{page.0}) has been alread y used, duplicate ignored \relax l.127 \vfill [0] (./introduction.tex Underfull \hbox (badness 10000) in paragraph at lines 59--61 []\OT1/cmr/m/n/10 Please send all com-ments and bug re-ports by elec-tronic mai l to ) [1] Underfull \vbox (badness 10000) has occurred while \output is active [2] (./usrman.toc [3]) [4] [5] [6] (./dirichlet.tex Chapter 1. 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[18] Overfull \hbox (47.90964pt too wide) in paragraph at lines 75--75 []\OT1/cmtt/m/n/10 Float f (const point& x) { return 1+(0.5/N)*(x[0]*(1-x[0])+x [1]*(1-x[1])+x[2]*(1-x[2])); }[] Overfull \hbox (11.15996pt too wide) in paragraph at lines 75--75 [] \OT1/cmtt/m/n/10 uh.u = fact.solve(m.uu*fh.u + m.ub*fh.b + mb.uu*gh.u + m b.ub*gh.b - a.ub*uh.b);[] Overfull \hbox (68.90945pt too wide) in paragraph at lines 75--75 [] \OT1/cmtt/m/n/10 int status = pcg (a.uu, uh.u, m.uu*fh.u + m.ub*fh.b + mb .uu*gh.u + mb.ub*gh.b - a.ub*uh.b,[] [19] Overfull \hbox (11.15996pt too wide) in paragraph at lines 93--93 [] \OT1/cmtt/m/n/10 uh.u = fact.solve(m.uu*fh.u + m.ub*fh.b + mb.uu*gh.u + m b.ub*gh.b - a.ub*uh.b); ) (./robin.tex [20] Overfull \hbox (16.40991pt too wide) in paragraph at lines 67--67 []\OT1/cmtt/m/n/10 Float u_ex (const point& x) { return 0.5*(x[0]*(1-x[0]) + x[ 1]*(1-x[1]))/Float(N); }[] [21] Overfull \hbox (11.15996pt too wide) in paragraph at lines 67--67 [] \OT1/cmtt/m/n/10 uh.u = fact.solve(m.uu*fh.u + m.ub*fh.b + mb.uu*gh.u + m b.ub*gh.b - a.ub*uh.b);[] Overfull \hbox (68.90945pt too wide) in paragraph at lines 67--67 [] \OT1/cmtt/m/n/10 int status = pcg (a.uu, uh.u, m.uu*fh.u + m.ub*fh.b + mb .uu*gh.u + mb.ub*gh.b - a.ub*uh.b,[] ) (./neumann-laplace.tex [22] [23] [24]) [25] [26] [27] [28] Chapter 3. 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Next, forms are d e-fined as usual, in file Underfull \vbox (badness 10000) has occurred while \output is active [41] [42] [43 <./stokes-cavity-2d-fig.pdf> <./stokes- cavity-3d-fig.png>] [44] Overfull \hbox (30.87141pt too wide) in paragraph at lines 292--299 [] [45 <./vorticity-cavity-2d-fig.png (PNG copy)> <./vorticity-cavity-3d-fig.png>] Overfull \hbox (55.63402pt too wide) in paragraph at lines 371--377 [] Underfull \vbox (badness 1348) has occurred while \output is active [46] Overfull \hbox (0.66005pt too wide) in paragraph at lines 386--386 [] \OT1/cmtt/m/n/10 ./vorticity < cavity2d.mfield | ./streamf-cavity | fie ld -black-and-white -[] ) [47 <./streamf-cavity-2d-fig.pdf>] [48] Chapter 4. (./incompressible-elasticity.tex [49] Overfull \hbox (11.15996pt too wide) in paragraph at lines 86--86 [] \OT1/cmtt/m/n/10 int status = pcg_abtbc (a.uu, b.uu, c.uu, uh.u, ph.u, -( a.ub*uh.b) + (mu*fh).u,[] Overfull \hbox (11.15996pt too wide) in paragraph at lines 86--86 [] \OT1/cmtt/m/n/10 int status = pcg_abtbc (a.uu, b.uu, c.uu, uh.u, ph.u, -( a.ub*uh.b) + (mu*fh).u,[] Overfull \hbox (0.66005pt too wide) in paragraph at lines 86--86 [] \OT1/cmtt/m/n/10 -(b.ub*uh.b), pcg_solver(mp.uu), pcg_solver(a.uu), m ax_iter, tol, &cerr);[] Underfull \vbox (badness 2142) has occurred while \output is active [50] Overfull \hbox (11.15996pt too wide) in paragraph at lines 113--113 [] \OT1/cmtt/m/n/10 int status = pcg_abtbc (a.uu, b.uu, c.uu, uh.u, ph.u, -( a.ub*uh.b) + (mu*fh).u, Overfull \hbox (23.9787pt too wide) in paragraph at lines 131--138 [] [51 <./incompressible-elasticity-square-fig.pdf> <./incompressible-elasticity-c ube-fig.png>]) (./stabilized-stokes.tex Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 1. 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(./transmission.tex [75] [76] Underfull \vbox (badness 10000) has occurred while \output is active [77] [78] ) [79 <./transmission-1d-fig.pdf>] [80] Chapter 7. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 195. Package hyperref Warning: Token not allowed in a PDF string (PDFDocEncoding): (hyperref) removing `math shift' on input line 195. (./p-laplacian.tex [81] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd ) Overfull \hbox (0.66005pt too wide) in paragraph at lines 133--133 []\OT1/cmtt/m/n/10 int p_laplacian_fixed_point (Float p, field fh, field& uh, F loat& r, size_t& n) {[] [82] Underfull \vbox (badness 10000) has occurred while \output is active [83] [84 <./p-laplacian-square-p=1,1-elevatio n.pdf> <./p-laplacian-square-p=1,1-cut.pdf>] [85 <./p-laplacian-square-r2.pdf> <./p-laplacian -square-r1.pdf> <./p-laplacian-rate.pdf> <./p-laplacian-rate-log.pdf>] Underfull \hbox (badness 10000) in paragraph at lines 349--354 [86] [87] [88] [89] [90 <./p-laplacian-newton-square-r1.pdf> <./p-laplacian-newton-square-r2.pdf>] [91] [92] [93 <./p-laplacian-damped-newton- square-r2.pdf> <./p-laplacian-damped-newton-square-r1.pdf>] Overfull \hbox (28.6581pt too wide) in paragraph at lines 808--826 [][] ) [94 <./p-laplacian-newton-p=1,7.pdf> <./p-laplacian-newton-p=1,6.pdf> <./p-la placian-newton-p=1,5.pdf> <./p-laplacian-damped-newton-p=1,5.pdf>] Chapter 8. (./dirichlet-nh-error.ctex [95] Overfull \hbox (52.90381pt too wide) in paragraph at lines 81--86 [] ) (./d-dx.ctex [96 <./demo2-P1-uniform.pdf> <./demo2-P2-uniform.pdf>]) (./demo2-error-grad.ctex Overfull \hbox (52.90381pt too wide) in paragraph at lines 19--24 [] [97]) (./crack.ctex [98 <./demo2-P1-uniform-grad.pdf> <./demo2-P2-uniform-grad. pdf>] [99 <./crack-fig.pdf>] [100] Overfull \hbox (52.90381pt too wide) in paragraph at lines 132--137 [] Package amsmath Warning: Foreign command \over; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 150. ) Underfull \vbox (badness 10000) has occurred while \output is active [101 <./cr ack-P1-uniform.pdf> <./crack-P2-uniform.pdf>] (./usrman.bbl (./usrman.brf) [102] Underfull \hbox (badness 10000) in paragraph at lines 25--25 []\OT1/cmr/m/n/10 C. C. Paige and M. A. Saun-ders. So-lu-tion of sparse in-def -i-nite sys- Underfull \hbox (badness 10000) in paragraph at lines 25--25 \OT1/cmr/m/n/10 tems of lin-ear equa-tions. \OT1/cmr/m/it/10 SIAM J. Nu-mer. A nal.\OT1/cmr/m/n/10 , 12(4):617--629, 1975. [103] Underfull \hbox (badness 1648) in paragraph at lines 138--138 []\OT1/cmr/m/n/10 G. M. Ko-belkov and M. A. Ol-shan-skii. Ef-fec-tive pre-con- di-tion-ing of Uzawa type Underfull \hbox (badness 5374) in paragraph at lines 138--138 \OT1/cmr/m/n/10 schemes for a gen-er-al-ized Stokes prob-lem. \OT1/cmr/m/it/10 Nu-mer. Math.\OT1/cmr/m/n/10 , 86:443--470, 2000. Underfull \hbox (badness 3780) in paragraph at lines 151--151 \OT1/cmr/m/n/10 tions: streamfunction-velocity for-mu-la-tion. \OT1/cmr/m/it/1 0 J. Com-put. Phys.\OT1/cmr/m/n/10 , 207:52--68, 2005. [104]) [105] [106] [107] [108] (./how-to-mesh.tex Appendix A. (./how-to-mesh-bamg.tex [109] No file my-square-cut.bamgcad. ) (./how-to-mesh-gmsh.tex Overfull \hbox (45.47188pt too wide) in paragraph at lines 9--15 [][] Underfull \vbox (badness 10000) has occurred while \output is active [110] [111 <./square-gmsh-geo.pdf> <./cube-gmsh-geo.png>] [112])) (./fdl.tex [113] [114] Appendix B. Underfull \hbox (badness 10000) in paragraph at lines 7--8 [115] [116] [117] [118] [119]) (./usrman.cnd [120] [121] [122]) (./usrman.fod [123]) (./usrman.exd [124]) (./usrman.prd [125]) [126] (./usrman.lof [127]) [128] (./usrman.aux) ) (see the transcript file for additional information)< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb> Output written on usrman.pdf (130 pages, 5067438 bytes). Transcript written on usrman.log. LaTeX Warning: Command \markboth has changed. LaTeX Warning: Command \markright has changed. mkdirhier /«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef if test -f usrman.pdf; then \ /bin/sh ../../config/install-sh -c -m 644 usrman.pdf /«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef/rheolef.pdf; \ fi mkdirhier /«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef/examples rm -f /«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef/examples/* for f in dirichlet.cc Makefile.demo dirichlet-nh.cc embankment.cc stress.cc embankment-adapt-2d.cc my-square.bamgcad my-square.dmn my-line.mshcad my-square.mshcad my-cube.mshcad square-gmsh.mshcad cube-gmsh.mshcad user2D.template user3D.template square-region.bdry square-region.dmn cube.bdry cube.dmn cube-old.dmn incompressible-elasticity.cc neumann.cc neumann-laplace.cc robin.cc contraction-bubble.cc contraction.bamgcad contraction.dmn cavity.h pcg_solver.h embankment.h stokes-cavity.cc vorticity.cc streamf-cavity.cc transmission.cc transmission-weight.cc stokes-poiseuille.cc stokes-poiseuille-bubble.cc square-qmg.tcl cube-qmg.off cube-qmg.tcl heat.cc convect.cc navier-stokes-cavity.cc vortex-position.cc navier-stokes-solve.h navier-stokes-solve0.h cahouet-chabart.h neumann-laplace-assembly.h stokes-assembly.h p-laplacian-fixed-point.h p-laplacian-fixed-point.cc poisson-dirichlet.icc p-laplacian-newton.cc p-laplacian.h p-laplacian.icc p-laplacian-damped-newton.cc; do \ /bin/sh ../../config/install-sh -c -m 644 ./$f /«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef/examples/$f; \ done cd /«PKGBUILDDIR»/debian/tmp-rheolef/usr/share/doc/rheolef/examples; \ mv Makefile.demo Makefile Making install in doxygen make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[1]: Leaving directory `/«PKGBUILDDIR»' dh_movefiles --sourcedir=debian/tmp-rheolef # removing some useless progs rm -f debian/tmp-rheolef/usr/bin/doc2man rm -f debian/tmp-rheolef/usr/bin/doc2texi rm -f debian/tmp-rheolef/usr/bin/doc2oxy # remove info/dir rm -f debian/tmp-rheolef/usr/share/info/dir* # respect debian naming conventions test -d debian/tmp-rheolef/usr/share/doc/rheolef && mv debian/tmp-rheolef/usr/share/doc/rheolef debian/tmp-rheolef/usr/share/doc/rheolef-doc # Changing file access permissions chmod 755 debian/tmp-rheolef/usr/share/rheolef/check-shlibpath_var.sh dh_testdir dh_testroot dh_install --sourcedir=debian/tmp-rheolef dh_lintian dh_installinfo dh_installman dh_installexamples dh_makeshlibs dh_shlibdeps --dpkg-shlibdeps-params="--ignore-missing-info" dpkg-shlibdeps: warning: symbol _ZNSt11logic_errorD2Ev used by debian/librheolef1/usr/lib/librheolef-5.93.so.5.0.93 found in none of the libraries. dpkg-shlibdeps: warning: symbol _ZNKSt19basic_ostringstreamIcSt11char_traitsIcESaIcEE3strEv used by debian/librheolef1/usr/lib/librheolef-5.93.so.5.0.93 found in none of the libraries. dpkg-shlibdeps: warning: symbol _ZNKSt9basic_iosIcSt11char_traitsIcEEntEv used by debian/librheolef1/usr/lib/librheolef-5.93.so.5.0.93 found in none of the libraries. dpkg-shlibdeps: warning: symbol _ZTISt11logic_error used by debian/librheolef1/usr/lib/librheolef-5.93.so.5.0.93 found in none of the libraries. dpkg-shlibdeps: warning: symbol _ZStlsISt11char_traitsIcEERSt13basic_ostreamIcT_ES5_c used by debian/librheolef1/usr/lib/librheolef-5.93.so.5.0.93 found in none of the libraries. dpkg-shlibdeps: warning: symbol _ZSt20__throw_out_of_rangePKc used by debian/librheolef1/usr/lib/librheolef-5.93.so.5.0.93 found in none of the libraries. dpkg-shlibdeps: warning: symbol _ZNSt15basic_streambufIcSt11char_traitsIcEE5pbumpEi used by debian/librheolef1/usr/lib/librheolef-5.93.so.5.0.93 found in none of the libraries. dpkg-shlibdeps: warning: symbol _ZNSsixEj used by debian/librheolef1/usr/lib/librheolef-5.93.so.5.0.93 found in none of the libraries. dpkg-shlibdeps: warning: symbol _ZNSi4peekEv used by debian/librheolef1/usr/lib/librheolef-5.93.so.5.0.93 found in none of the libraries. dpkg-shlibdeps: warning: symbol _ZNSt15basic_streambufIcSt11char_traitsIcEE4setgEPcS3_S3_ used by debian/librheolef1/usr/lib/librheolef-5.93.so.5.0.93 found in none of the libraries. dpkg-shlibdeps: warning: 199 other similar warnings have been skipped (use -v to see them all). dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/librheolef1/usr/lib/librheolef-5.93.so.5.0.93 was not linked against libamd.so.2.2.0 (it uses none of the library's symbols). dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/librheolef1/usr/lib/librheolef-5.93.so.5.0.93 was not linked against libblas.so.3gf (it uses none of the library's symbols). dpkg-shlibdeps: warning: debian/rheolef/usr/bin/cad contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: debian/rheolef/usr/lib/rheolef/mkgeo_grid_1d contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: debian/rheolef/usr/bin/mfield contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: debian/rheolef/usr/bin/branch contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: debian/rheolef/usr/bin/csr contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: debian/rheolef/usr/bin/geo contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: debian/rheolef/usr/lib/rheolef/mkgeo_grid_3d contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: debian/rheolef/usr/bin/space contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: debian/rheolef/usr/bin/bamg contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: debian/rheolef/usr/lib/rheolef/mkgeo_grid_2d contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: debian/rheolef/usr/bin/field contains an unresolvable reference to symbol __aeabi_unwind_cpp_pr1@GCC_3.5: it's probably a plugin. dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/rheolef/usr/bin/cad debian/rheolef/usr/lib/rheolef/mkgeo_grid_1d debian/rheolef/usr/bin/mfield debian/rheolef/usr/bin/branch debian/rheolef/usr/bin/csr debian/rheolef/usr/bin/geo debian/rheolef/usr/lib/rheolef/mkgeo_grid_3d debian/rheolef/usr/bin/space debian/rheolef/usr/lib/rheolef/mkgeo_grid_2d debian/rheolef/usr/bin/field were not linked against libamd.so.2.2.0 (they use none of the library's symbols). dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/rheolef/usr/bin/cad debian/rheolef/usr/lib/rheolef/mkgeo_grid_1d debian/rheolef/usr/bin/mfield debian/rheolef/usr/bin/branch debian/rheolef/usr/bin/csr debian/rheolef/usr/bin/geo debian/rheolef/usr/lib/rheolef/mkgeo_grid_3d debian/rheolef/usr/bin/space debian/rheolef/usr/lib/rheolef/mkgeo_grid_2d debian/rheolef/usr/bin/field were not linked against libblas.so.3gf (they use none of the library's symbols). dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/rheolef/usr/bin/cad debian/rheolef/usr/lib/rheolef/mkgeo_grid_1d debian/rheolef/usr/bin/mfield debian/rheolef/usr/bin/branch debian/rheolef/usr/bin/csr debian/rheolef/usr/bin/geo debian/rheolef/usr/lib/rheolef/mkgeo_grid_3d debian/rheolef/usr/bin/space debian/rheolef/usr/lib/rheolef/mkgeo_grid_2d debian/rheolef/usr/bin/field were not linked against libumfpack.so.5.4.0 (they use none of the library's symbols). dh_installdocs dh_installchangelogs ChangeLog dh_compress -X.pdf dh_strip dh_link dh_fixperms dh_installdeb dh_gencontrol --dpkg-gencontrol-params="-Tdebian/librheolef1.substvars" dpkg-gencontrol: warning: package librheolef-dev: unused substitution variable ${shlibs:Depends} dpkg-gencontrol: warning: package rheolef-doc: unused substitution variable ${shlibs:Depends} dh_md5sums dh_builddeb || true dpkg-deb: building package `librheolef1' in `../librheolef1_5.93-2_armhf.deb'. dpkg-deb: building package `librheolef-dev' in `../librheolef-dev_5.93-2_armhf.deb'. dpkg-deb: building package `rheolef-doc' in `../rheolef-doc_5.93-2_all.deb'. dpkg-deb: building package `rheolef' in `../rheolef_5.93-2_armhf.deb'. dpkg-genchanges -B -mbuildd >../rheolef_5.93-2_armhf.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build rheolef-5.93 dpkg-buildpackage: binary only upload (no source included) ──────────────────────────────────────────────────────────────────────────────── Build finished at 20120515-0750 Finished ──────── I: Built successfully E: Package builds rheolef-doc_5.93-2_all.deb when binary-indep target is not called. This is a bug in the packaging. ┌──────────────────────────────────────────────────────────────────────────────┐ │ Changes │ └──────────────────────────────────────────────────────────────────────────────┘ rheolef_5.93-2_armhf.changes: ───────────────────────────── Format: 1.8 Date: Thu, 26 March 2011 08:10:11 +0200 Source: rheolef Binary: librheolef1 librheolef-dev rheolef-doc rheolef Architecture: armhf Version: 5.93-2 Distribution: testing Urgency: low Maintainer: buildd Changed-By: Pierre Saramito Description: librheolef-dev - Finite elements for partial differential equations (headers) librheolef1 - Finite elements for partial differential equations (shared librar rheolef - Finite elements for partial differential equations rheolef-doc - Finite elements for partial differential equations (documentation Closes: 616276 619917 Changes: rheolef (5.93-2) unstable; urgency=low . * debian/control: - "vtk-tcl" dependency changed to "tcl-vtk|vtk-tcl" (closes: #619917) - "doxygen" dependency removed (closes: #616276) * debian/rheolef-doc.install : add refman in .info format * debian/rheolef-doc.doc-base.refman: created for .pdf .html & .info * debian/rules: - clean some obsolete Makefile commandes Checksums-Sha1: 8b364068320a211fb32248c3f8b2312fbe062574 1051780 librheolef1_5.93-2_armhf.deb 6376e06fe7017d00870a8a21d26d595c59f78eac 284712 librheolef-dev_5.93-2_armhf.deb 0ee4d83a674854ea5cdf800788abeb4d3f974c8e 515080 rheolef_5.93-2_armhf.deb Checksums-Sha256: ce28a8485e7fd3edeb775343cfae411b00d0cf7be2f5f03d2c9f5532d50cd4bb 1051780 librheolef1_5.93-2_armhf.deb 4c12a496db496bc14de1a2732c9cf0036d302126ef87f68662f5da4e49b947d1 284712 librheolef-dev_5.93-2_armhf.deb 28bc2ea8ac3e1a4abc091b2c304edf6050a7aba7565b18f6d26cea18233be2f2 515080 rheolef_5.93-2_armhf.deb Files: e2f1893a4c29404cfc1c9ed8562f8804 1051780 libs optional librheolef1_5.93-2_armhf.deb 0561e664d91f0d12e2cd8e0aebc3e544 284712 libdevel optional librheolef-dev_5.93-2_armhf.deb 5d5359b22b0aae62696a9a214b194582 515080 math optional rheolef_5.93-2_armhf.deb ┌──────────────────────────────────────────────────────────────────────────────┐ │ Package contents │ └──────────────────────────────────────────────────────────────────────────────┘ librheolef1_5.93-2_armhf.deb ──────────────────────────── new debian package, version 2.0. size 1051780 bytes: control archive= 1489 bytes. 1689 bytes, 38 lines control 574 bytes, 8 lines md5sums 135 bytes, 7 lines * postinst #!/bin/sh 132 bytes, 7 lines * postrm #!/bin/sh 30 bytes, 1 lines shlibs Package: librheolef1 Source: rheolef Version: 5.93-2 Architecture: armhf Maintainer: Debian Science Maintainers Installed-Size: 3854 Depends: libamd2.2.0 (>= 1:3.4.0), libblas3gf | libblas.so.3gf | libatlas3gf-base, libboost-iostreams1.49.0 (>= 1.49.0-1), libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libumfpack5.4.0 (>= 1:3.4.0) Suggests: rheolef-doc Conflicts: librheolef5.89, librheolef5.90 Replaces: librheolef5.89, librheolef5.90 Section: libs Priority: optional Homepage: http://ljk.imag.fr/membres/Pierre.Saramito/rheolef Description: Finite elements for partial differential equations (shared library) Rheolef is a computer environment that serves as a convenient laboratory for computations in applied mathematics, involving finite element-like methods. It provides a set of unix commands and C++ algorithms and containers. . Containers covers first the classic graph data structure for sparse matrix formats and finite element meshes. . An higher level of abstraction is provided by containers related to approximate finite element spaces, discrete fields and bilinear forms. . . Current applications cover . - Poisson problems in 1D 2D and 3D with P1 or P2 elements - Stokes problems in 2D and 3D, with P2-P1 or P1 bubble-P1 elements - linear elasticity in 2D and 3D, with P1 and P2 elements, including the incompressible and nearly incompressible elasticity - characteristic method for convection-difusion, time-dependent problems and Navier-Stokes equations. - auto-adaptive mesh based for 2D problems - axisymetric problems - multi-regions and non-constant coefficients - axisymetric problems drwxr-xr-x root/root 0 2012-05-15 07:49 ./ drwxr-xr-x root/root 0 2012-05-15 07:48 ./usr/ drwxr-xr-x root/root 0 2012-05-15 07:49 ./usr/lib/ -rw-r--r-- root/root 3899464 2012-05-15 07:49 ./usr/lib/librheolef-5.93.so.5.0.93 drwxr-xr-x root/root 0 2012-05-15 07:49 ./usr/share/ drwxr-xr-x root/root 0 2012-05-15 07:49 ./usr/share/doc/ drwxr-xr-x root/root 0 2012-05-15 07:49 ./usr/share/doc/librheolef1/ -rw-r--r-- root/root 2523 2005-07-18 05:03 ./usr/share/doc/librheolef1/changelog.gz -rw-r--r-- root/root 1041 2006-01-16 10:11 ./usr/share/doc/librheolef1/README -rw-r--r-- root/root 1336 2011-03-31 01:55 ./usr/share/doc/librheolef1/changelog.Debian.gz -rw-r--r-- root/root 2821 2010-10-27 10:26 ./usr/share/doc/librheolef1/copyright -rw-r--r-- root/root 39 2010-04-13 08:07 ./usr/share/doc/librheolef1/README.Debian -rw-r--r-- root/root 1039 2011-03-19 03:42 ./usr/share/doc/librheolef1/NEWS.gz drwxr-xr-x root/root 0 2012-05-15 07:48 ./usr/share/lintian/ drwxr-xr-x root/root 0 2012-05-15 07:48 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 65 2012-05-15 07:08 ./usr/share/lintian/overrides/librheolef1 lrwxrwxrwx root/root 0 2012-05-15 07:49 ./usr/lib/librheolef-5.93.so.5 -> librheolef-5.93.so.5.0.93 librheolef-dev_5.93-2_armhf.deb ─────────────────────────────── new debian package, version 2.0. size 284712 bytes: control archive= 8453 bytes. 1563 bytes, 36 lines control 18787 bytes, 273 lines md5sums Package: librheolef-dev Source: rheolef Version: 5.93-2 Architecture: armhf Maintainer: Debian Science Maintainers Installed-Size: 1093 Depends: librheolef1 (= 5.93-2), rheolef (= 5.93-2), libboost-dev, libboost-iostreams-dev, libboost-serialization-dev, libsuitesparse-dev Recommends: rheolef-doc (= 5.93-2) Section: libdevel Priority: optional Homepage: http://ljk.imag.fr/membres/Pierre.Saramito/rheolef Description: Finite elements for partial differential equations (headers) Rheolef is a computer environment that serves as a convenient laboratory for computations in applied mathematics, involving finite element-like methods. It provides a set of unix commands and C++ algorithms and containers. . Containers covers first the classic graph data structure for sparse matrix formats and finite element meshes. . An higher level of abstraction is provided by containers related to approximate finite element spaces, discrete fields and bilinear forms. . . Current applications cover . - Poisson problems in 1D 2D and 3D with P1 or P2 elements - Stokes problems in 2D and 3D, with P2-P1 or P1 bubble-P1 elements - linear elasticity in 2D and 3D, with P1 and P2 elements, including the incompressible and nearly incompressible elasticity - characteristic method for convection-difusion, time-dependent problems and Navier-Stokes equations. - auto-adaptive mesh based for 2D problems - axisymetric problems - multi-regions and non-constant coefficients - axisymetric problems drwxr-xr-x root/root 0 2012-05-15 07:49 ./ drwxr-xr-x root/root 0 2012-05-15 07:48 ./usr/ drwxr-xr-x root/root 0 2012-05-15 07:49 ./usr/lib/ drwxr-xr-x root/root 0 2012-05-15 07:48 ./usr/lib/rheolef/ -rw-r--r-- root/root 11180 2012-05-15 07:45 ./usr/lib/rheolef/config.h -rw-r--r-- root/root 1510 2012-05-15 07:45 ./usr/lib/rheolef/rheolef.mk drwxr-xr-x root/root 0 2012-05-15 07:49 ./usr/share/ drwxr-xr-x root/root 0 2012-05-15 07:49 ./usr/share/doc/ drwxr-xr-x root/root 0 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2012-05-15 07:45 ./usr/include/rheolef/dmalloc_return.h -rw-r--r-- root/root 11231 2012-05-15 07:45 ./usr/include/rheolef/hazel.h -rw-r--r-- root/root 1664 2012-05-15 07:45 ./usr/include/rheolef/form_assembly.h -rw-r--r-- root/root 4381 2012-05-15 07:45 ./usr/include/rheolef/cheby.h -rw-r--r-- root/root 2266 2012-05-15 07:45 ./usr/include/rheolef/pstream.h lrwxrwxrwx root/root 0 2012-05-15 07:49 ./usr/lib/librheolef.so -> librheolef-5.93.so.5.0.93 lrwxrwxrwx root/root 0 2012-05-15 07:49 ./usr/include/rheolef.h -> rheolef/rheolef.h rheolef_5.93-2_armhf.deb ──────────────────────── new debian package, version 2.0. size 515080 bytes: control archive= 3169 bytes. 1834 bytes, 38 lines control 4586 bytes, 71 lines md5sums Package: rheolef Version: 5.93-2 Architecture: armhf Maintainer: Debian Science Maintainers Installed-Size: 1659 Depends: libamd2.2.0 (>= 1:3.4.0), libblas3gf | libblas.so.3gf | libatlas3gf-base, libboost-iostreams1.49.0 (>= 1.49.0-1), libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libumfpack5.4.0 (>= 1:3.4.0), librheolef1 (= 5.93-2) Recommends: librheolef-dev, rheolef-doc, gnuplot, imagemagik, tcl-vtk | vtk-tcl, gmsh, mayavi2 | mayavi, paraview, ffmpeg Section: math Priority: optional Homepage: http://ljk.imag.fr/membres/Pierre.Saramito/rheolef Description: Finite elements for partial differential equations Rheolef is a computer environment that serves as a convenient laboratory for computations in applied mathematics, involving finite element-like methods. It provides a set of unix commands and C++ algorithms and containers. . Containers covers first the classic graph data structure for sparse matrix formats and finite element meshes. . An higher level of abstraction is provided by containers related to approximate finite element spaces, discrete fields and bilinear forms. . . Current applications cover . - Poisson problems in 1D 2D and 3D with P1 or P2 elements - Stokes problems in 2D and 3D, with P2-P1 or P1 bubble-P1 elements - linear elasticity in 2D and 3D, with P1 and P2 elements, including the incompressible and nearly incompressible elasticity - characteristic method for convection-difusion, time-dependent problems and Navier-Stokes equations. - auto-adaptive mesh based for 2D problems - axisymetric problems - multi-regions and non-constant coefficients - axisymetric problems . Input and Output in various file format for meshes generators and numerical data visualization systems (mayavi, vtk, plotmtv, gnuplot). drwxr-xr-x root/root 0 2012-05-15 07:49 ./ drwxr-xr-x root/root 0 2012-05-15 07:48 ./usr/ drwxr-xr-x root/root 0 2012-05-15 07:48 ./usr/lib/ drwxr-xr-x root/root 0 2012-05-15 07:49 ./usr/lib/rheolef/ -rwxr-xr-x root/root 8164 2012-05-15 07:49 ./usr/lib/rheolef/mkgeo_grid_1d -rwxr-xr-x root/root 13172 2012-05-15 07:49 ./usr/lib/rheolef/mkgeo_grid_2d -rwxr-xr-x root/root 17308 2012-05-15 07:49 ./usr/lib/rheolef/mkgeo_grid_3d drwxr-xr-x root/root 0 2012-05-15 07:49 ./usr/share/ drwxr-xr-x root/root 0 2012-05-15 07:49 ./usr/share/doc/ drwxr-xr-x root/root 0 2012-05-15 07:49 ./usr/share/doc/rheolef/ -rw-r--r-- root/root 2523 2005-07-18 05:03 ./usr/share/doc/rheolef/changelog.gz -rw-r--r-- root/root 1336 2011-03-31 01:55 ./usr/share/doc/rheolef/changelog.Debian.gz -rw-r--r-- root/root 2821 2010-10-27 10:26 ./usr/share/doc/rheolef/copyright drwxr-xr-x 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2012-05-15 07:45 ./usr/bin/rheolef-config -rwxr-xr-x root/root 84928 2012-05-15 07:49 ./usr/bin/geo -rwxr-xr-x root/root 61960 2012-05-15 07:49 ./usr/bin/space ┌──────────────────────────────────────────────────────────────────────────────┐ │ Post Build │ └──────────────────────────────────────────────────────────────────────────────┘ ┌──────────────────────────────────────────────────────────────────────────────┐ │ Cleanup │ └──────────────────────────────────────────────────────────────────────────────┘ Purging /«BUILDDIR» Reading package lists... Building dependency tree... Reading state information... 0 upgraded, 0 newly installed, 0 to remove and 13 not upgraded. Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: autoconf* automake* autotools-dev* bison* bsdmainutils* debhelper* ed* file* flex* fontconfig* fontconfig-config* gawk* gettext* gettext-base* ghostscript* ginac-tools* gnuplot* gnuplot-nox* gnuplot-x11* graphviz* groff-base* gs-cjk-resource* gsfonts* html2text* imagemagick* imagemagick-common* install-info* intltool-debian* libamd2.2.0* libatk1.0-0* libatk1.0-data* libaudio2* libavahi-client3* libavahi-common-data* libavahi-common3* libbison-dev* libblas-dev* libblas3gf* libboost-dev* libboost-iostreams-dev* libboost-iostreams1.49-dev* libboost-iostreams1.49.0* libboost-regex1.49-dev* libboost-regex1.49.0* libboost-serialization-dev* libboost-serialization1.49-dev* libboost-serialization1.49.0* libboost1.49-dev* libbsd0* libbtf1.1.0* libcairo2* libcamd2.2.0* libccolamd2.7.1* libcdt4* libcgraph5* libcholmod1.7.1* libcln-dev* libcln6* libcolamd2.7.1* libcroco3* libcsparse2.2.3* libcups2* libcupsimage2* libcxsparse2.2.3* libdatrie1* libdbus-1-3* libdrm2* libedit2* libexpat1* libffi5* libfontconfig1* libfreetype6* libgcrypt11* libgd2-noxpm* libgdk-pixbuf2.0-0* libgdk-pixbuf2.0-common* libgfortran3* libginac-dev* libginac2* libgl1-mesa-glx* libglapi-mesa* libglib2.0-0* libglu1-mesa* libgmp-dev* libgmpxx4ldbl* libgnutls26* libgpg-error0* libgraph4* libgraphite3* libgs9* libgs9-common* libgssapi-krb5-2* libgtk2.0-0* libgtk2.0-common* libgvc5* libgvpr1* libice6* libicu-dev* libicu48* libidn11* libijs-0.35* libjasper1* libjbig0* libjbig2dec0* libjpeg8* libk5crypto3* libkeyutils1* libklu1.1.0* libkpathsea6* libkrb5-3* libkrb5support0* liblapack-dev* liblapack3gf* liblcms1* liblcms2-2* libldl2.0.1* liblqr-1-0* libltdl-dev* libltdl7* liblua5.1-0* libmagic1* libmagickcore5* libmagickwand5* libmng1* libopenjpeg2* libp11-kit0* libpango1.0-0* libpaper-utils* libpaper1* libpathplan4* libpcre3* libpipeline1* libpixman-1-0* libpng12-0* libpoppler13* libptexenc1* libqt4-dbus* libqt4-network* libqt4-svg* libqt4-xml* libqtcore4* libqtgui4* libsigsegv2* libsm6* libsuitesparse-dev* libtasn1-3* libthai-data* libthai0* libtiff4* libtool* libumfpack5.4.0* libunistring0* libwxbase2.8-0* libwxgtk2.8-0* libx11-6* libx11-data* libxau6* libxaw7* libxcb-render0* libxcb-shm0* libxcb1* libxcomposite1* libxcursor1* libxdamage1* libxdmcp6* libxdot4* libxext6* libxfixes3* libxft2* libxi6* libxinerama1* libxml2* libxmu6* libxpm4* libxrandr2* libxrender1* libxt6* libxxf86vm1* luatex* m4* man-db* mime-support* po-debconf* preview-latex-style* qdbus* sbuild-build-depends-core-dummy* sbuild-build-depends-rheolef-dummy* shared-mime-info* tex-common* texi2html* texinfo* texlive-base* texlive-binaries* texlive-common* texlive-doc-base* texlive-font-utils* texlive-fonts-recommended* texlive-latex-base* texlive-latex-extra* texlive-latex-recommended* texlive-math-extra* texlive-pictures* transfig* ttf-dejavu-core* ttf-marvosym* x11-common* xaw3dg* xfig* xutils-dev* 0 upgraded, 0 newly installed, 209 to remove and 13 not upgraded. After this operation, 560 MB disk space will be freed. (Reading database ... 41061 files and directories currently installed.) Removing sbuild-build-depends-rheolef-dummy ... Removing automake ... Removing autoconf ... Purging configuration files for autoconf ... Removing libtool ... Removing autotools-dev ... Removing bison ... Removing debhelper ... Removing man-db ... Purging configuration files for man-db ... Removing bsdmainutils ... Purging configuration files for bsdmainutils ... Removing texlive-latex-extra ... Purging configuration files for texlive-latex-extra ... Removing texlive-pictures ... Purging configuration files for texlive-pictures ... Removing texlive-math-extra ... Purging configuration files for texlive-math-extra ... Removing texlive-latex-recommended ... Purging configuration files for texlive-latex-recommended ... Removing texlive-latex-base ... Purging configuration files for texlive-latex-base ... Removing texlive-font-utils ... Purging configuration files for texlive-font-utils ... Removing texlive-fonts-recommended ... Purging configuration files for texlive-fonts-recommended ... Removing texlive-base ... Purging configuration files for texlive-base ... Removing texlive-binaries ... Removing ed ... Removing file ... Removing flex ... Removing gnuplot ... Removing gnuplot-x11 ... Removing 'diversion of /usr/bin/gnuplot to /usr/bin/gnuplot-nox by gnuplot-x11' Removing 'diversion of /usr/share/man/man1/gnuplot.1.gz to /usr/share/man/man1/gnuplot-nox.1.gz by gnuplot-x11' Purging configuration files for gnuplot-x11 ... Removing libqt4-svg ... Purging configuration files for libqt4-svg ... Removing libqtgui4 ... Purging configuration files for libqtgui4 ... Removing libwxgtk2.8-0:armhf ... Purging configuration files for libwxgtk2.8-0:armhf ... Removing graphviz ... Purging configuration files for graphviz ... Removing libgvc5 ... Purging configuration files for libgvc5 ... Removing libgtk2.0-0:armhf ... Purging configuration files for libgtk2.0-0:armhf ... Removing gnuplot-nox ... Purging configuration files for gnuplot-nox ... Removing libpango1.0-0:armhf ... Purging configuration files for libpango1.0-0:armhf ... Removing fontconfig ... Purging configuration files for fontconfig ... Removing libxft2:armhf ... Purging configuration files for libxft2:armhf ... Removing luatex ... Removing libpoppler13 ... Purging configuration files for libpoppler13 ... Removing imagemagick ... Purging configuration files for imagemagick ... Removing libmagickwand5:armhf ... Purging configuration files for libmagickwand5:armhf ... Removing libmagickcore5:armhf ... Purging configuration files for libmagickcore5:armhf ... Removing libcairo2:armhf ... Purging configuration files for libcairo2:armhf ... Removing transfig ... Removing gawk ... update-alternatives: using /usr/bin/mawk to provide /usr/bin/awk (awk) in auto mode. Removing po-debconf ... Removing intltool-debian ... Removing gettext ... Removing gettext-base ... Removing ginac-tools ... Purging configuration files for ginac-tools ... Removing groff-base ... Purging configuration files for groff-base ... Removing html2text ... Purging configuration files for html2text ... Removing imagemagick-common ... Purging configuration files for imagemagick-common ... Removing texi2html ... Removing m4 ... Removing libginac-dev ... Removing libcln-dev ... Removing install-info ... Removing libsuitesparse-dev ... Removing libumfpack5.4.0 ... Purging configuration files for libumfpack5.4.0 ... Removing libklu1.1.0 ... Purging configuration files for libklu1.1.0 ... Removing libcholmod1.7.1 ... Purging configuration files for libcholmod1.7.1 ... Removing libamd2.2.0 ... Purging configuration files for libamd2.2.0 ... Removing libatk1.0-0:armhf ... Purging configuration files for libatk1.0-0:armhf ... Removing libatk1.0-data ... Removing libaudio2:armhf ... Removing libbison-dev:armhf ... Removing liblapack-dev ... Removing libblas-dev ... Removing liblapack3gf ... Purging configuration files for liblapack3gf ... Removing libblas3gf ... Purging configuration files for libblas3gf ... Removing libboost-dev ... Removing libboost-iostreams-dev ... Removing libboost-iostreams1.49-dev ... Removing libboost-iostreams1.49.0 ... Purging configuration files for libboost-iostreams1.49.0 ... Removing libboost-regex1.49-dev ... Removing libboost-regex1.49.0 ... Purging configuration files for libboost-regex1.49.0 ... Removing libboost-serialization-dev ... Removing libboost-serialization1.49-dev ... Removing libboost-serialization1.49.0 ... Purging configuration files for libboost-serialization1.49.0 ... Removing libboost1.49-dev ... Removing libedit2:armhf ... Purging configuration files for libedit2:armhf ... Removing libbsd0:armhf ... Purging configuration files for libbsd0:armhf ... Removing libbtf1.1.0 ... Purging configuration files for libbtf1.1.0 ... Removing libcamd2.2.0 ... Purging configuration files for libcamd2.2.0 ... Removing libccolamd2.7.1 ... Purging configuration files for libccolamd2.7.1 ... Removing libgvpr1 ... Purging configuration files for libgvpr1 ... Removing libgraph4 ... Purging configuration files for libgraph4 ... Removing libcgraph5 ... Purging configuration files for libcgraph5 ... Removing libcdt4 ... Purging configuration files for libcdt4 ... Removing libginac2 ... Purging configuration files for libginac2 ... Removing libcln6 ... Purging configuration files for libcln6 ... Removing libcolamd2.7.1 ... Purging configuration files for libcolamd2.7.1 ... Removing libcroco3:armhf ... Purging configuration files for libcroco3:armhf ... Removing libcsparse2.2.3 ... Purging configuration files for libcsparse2.2.3 ... Removing libcxsparse2.2.3 ... Purging configuration files for libcxsparse2.2.3 ... Removing libthai0:armhf ... Purging configuration files for libthai0:armhf ... Removing libdatrie1:armhf ... Purging configuration files for libdatrie1:armhf ... Removing libqt4-network ... Purging configuration files for libqt4-network ... Removing libglu1-mesa:armhf ... Purging configuration files for libglu1-mesa:armhf ... Removing libgl1-mesa-glx:armhf ... Purging configuration files for libgl1-mesa-glx:armhf ... Removing libdrm2:armhf ... Purging configuration files for libdrm2:armhf ... Removing libwxbase2.8-0:armhf ... Purging configuration files for libwxbase2.8-0:armhf ... Removing shared-mime-info ... Purging configuration files for shared-mime-info ... Removing liblqr-1-0 ... Purging configuration files for liblqr-1-0 ... Removing libgdk-pixbuf2.0-0:armhf ... Purging configuration files for libgdk-pixbuf2.0-0:armhf ... Removing libgd2-noxpm ... Purging configuration files for libgd2-noxpm ... Removing libgdk-pixbuf2.0-common ... Removing libgfortran3:armhf ... Purging configuration files for libgfortran3:armhf ... Removing libglapi-mesa:armhf ... Purging configuration files for libglapi-mesa:armhf ... Removing libgmp-dev ... Removing libgmpxx4ldbl:armhf ... Purging configuration files for libgmpxx4ldbl:armhf ... Removing libgraphite3 ... Purging configuration files for libgraphite3 ... Removing libgtk2.0-common ... Purging configuration files for libgtk2.0-common ... Removing xfig ... Purging configuration files for xfig ... Removing xaw3dg ... Purging configuration files for xaw3dg ... Removing libxaw7:armhf ... Purging configuration files for libxaw7:armhf ... Removing libxmu6:armhf ... Purging configuration files for libxmu6:armhf ... Removing libxt6:armhf ... Purging configuration files for libxt6:armhf ... Removing libsm6:armhf ... Purging configuration files for libsm6:armhf ... Removing libice6:armhf ... Purging configuration files for libice6:armhf ... Removing libicu-dev ... Removing libicu48:armhf ... Purging configuration files for libicu48:armhf ... Removing libmng1:armhf ... Purging configuration files for libmng1:armhf ... Removing libptexenc1 ... Purging configuration files for libptexenc1 ... Removing libkpathsea6 ... Purging configuration files for libkpathsea6 ... Removing liblcms1 ... Purging configuration files for liblcms1 ... Removing libldl2.0.1 ... Purging configuration files for libldl2.0.1 ... Removing libltdl-dev:armhf ... Removing libltdl7:armhf ... Purging configuration files for libltdl7:armhf ... Removing liblua5.1-0:armhf ... Purging configuration files for liblua5.1-0:armhf ... Removing libmagic1:armhf ... Purging configuration files for libmagic1:armhf ... Removing libopenjpeg2 ... Purging configuration files for libopenjpeg2 ... Removing libpaper-utils ... Removing libpathplan4 ... Purging configuration files for libpathplan4 ... Removing libpipeline1:armhf ... Purging configuration files for libpipeline1:armhf ... Removing libpixman-1-0:armhf ... Purging configuration files for libpixman-1-0:armhf ... Removing libsigsegv2 ... Purging configuration files for libsigsegv2 ... Removing libthai-data ... Removing libunistring0:armhf ... Purging configuration files for libunistring0:armhf ... Removing libxxf86vm1:armhf ... Purging configuration files for libxxf86vm1:armhf ... Removing libxrandr2:armhf ... Purging configuration files for libxrandr2:armhf ... Removing libxcursor1:armhf ... Purging configuration files for libxcursor1:armhf ... Removing libxrender1:armhf ... Purging configuration files for libxrender1:armhf ... Removing libxpm4:armhf ... Purging configuration files for libxpm4:armhf ... Removing libxinerama1:armhf ... Purging configuration files for libxinerama1:armhf ... Removing libxi6:armhf ... Purging configuration files for libxi6:armhf ... Removing libxfixes3:armhf ... Purging configuration files for libxfixes3:armhf ... Removing libxext6:armhf ... Purging configuration files for libxext6:armhf ... Removing libxdamage1:armhf ... Purging configuration files for libxdamage1:armhf ... Removing libxcomposite1:armhf ... Purging configuration files for libxcomposite1:armhf ... Removing libx11-6:armhf ... Purging configuration files for libx11-6:armhf ... Removing libx11-data ... Removing libxcb-shm0:armhf ... Purging configuration files for libxcb-shm0:armhf ... Removing libxcb-render0:armhf ... Purging configuration files for libxcb-render0:armhf ... Removing libxcb1:armhf ... Purging configuration files for libxcb1:armhf ... Removing libxau6:armhf ... Purging configuration files for libxau6:armhf ... Removing libxdmcp6:armhf ... Purging configuration files for libxdmcp6:armhf ... Removing libxdot4 ... Purging configuration files for libxdot4 ... Removing libxml2:armhf ... Purging configuration files for libxml2:armhf ... Removing mime-support ... Purging configuration files for mime-support ... Removing preview-latex-style ... Purging configuration files for preview-latex-style ... Removing sbuild-build-depends-core-dummy ... Removing texlive-doc-base ... Purging configuration files for texlive-doc-base ... Removing texlive-common ... Removing tex-common ... Purging configuration files for tex-common ... Removing texinfo ... Purging configuration files for texinfo ... Removing ttf-marvosym ... Removing x11-common ... All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of stop. Purging configuration files for x11-common ... Removing xutils-dev ... Removing libqt4-dbus ... Purging configuration files for libqt4-dbus ... Removing qdbus ... Removing libqt4-xml ... Purging configuration files for libqt4-xml ... Removing libqtcore4 ... Purging configuration files for libqtcore4 ... Removing libglib2.0-0:armhf ... Purging configuration files for libglib2.0-0:armhf ... Removing libffi5:armhf ... Purging configuration files for libffi5:armhf ... Removing libpcre3:armhf ... Purging configuration files for libpcre3:armhf ... Removing libgs9 ... Purging configuration files for libgs9 ... Removing gs-cjk-resource ... Purging configuration files for gs-cjk-resource ... Removing libfontconfig1:armhf ... Purging configuration files for libfontconfig1:armhf ... Removing fontconfig-config ... Purging configuration files for fontconfig-config ... Removing libcupsimage2:armhf ... Purging configuration files for libcupsimage2:armhf ... Removing libcups2:armhf ... Purging configuration files for libcups2:armhf ... Removing libavahi-client3:armhf ... Purging configuration files for libavahi-client3:armhf ... Removing libavahi-common3:armhf ... Purging configuration files for libavahi-common3:armhf ... Removing libavahi-common-data:armhf ... Removing libdbus-1-3:armhf ... Purging configuration files for libdbus-1-3:armhf ... Removing libexpat1:armhf ... Purging configuration files for libexpat1:armhf ... Removing libfreetype6:armhf ... Purging configuration files for libfreetype6:armhf ... Removing libgnutls26:armhf ... Purging configuration files for libgnutls26:armhf ... Removing libgcrypt11:armhf ... Purging configuration files for libgcrypt11:armhf ... Removing libgpg-error0:armhf ... Purging configuration files for libgpg-error0:armhf ... Removing libgs9-common ... Removing libgssapi-krb5-2:armhf ... Purging configuration files for libgssapi-krb5-2:armhf ... Removing libidn11:armhf ... Purging configuration files for libidn11:armhf ... Removing libijs-0.35 ... Purging configuration files for libijs-0.35 ... Removing libjasper1:armhf ... Purging configuration files for libjasper1:armhf ... Removing libtiff4:armhf ... Purging configuration files for libtiff4:armhf ... Removing libjbig0:armhf ... Purging configuration files for libjbig0:armhf ... Removing libjbig2dec0 ... Purging configuration files for libjbig2dec0 ... Removing libjpeg8:armhf ... Removing libkrb5-3:armhf ... Purging configuration files for libkrb5-3:armhf ... Removing libk5crypto3:armhf ... Purging configuration files for libk5crypto3:armhf ... Removing libkeyutils1:armhf ... Purging configuration files for libkeyutils1:armhf ... Removing libkrb5support0:armhf ... Purging configuration files for libkrb5support0:armhf ... Removing liblcms2-2 ... Purging configuration files for liblcms2-2 ... Removing libp11-kit0:armhf ... Purging configuration files for libp11-kit0:armhf ... Removing libpaper1 ... Purging configuration files for libpaper1 ... Removing libpng12-0:armhf ... Purging configuration files for libpng12-0:armhf ... Removing libtasn1-3:armhf ... Purging configuration files for libtasn1-3:armhf ... Removing ttf-dejavu-core ... Removing ghostscript ... Removing gsfonts ... Purging configuration files for gsfonts ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Summary │ └──────────────────────────────────────────────────────────────────────────────┘ Architecture: armhf Build-Space: 157076 Build-Time: 2515 Distribution: testing Install-Time: 471 Job: rheolef_5.93-2 Package: rheolef Package-Time: 3009 Source-Version: 5.93-2 Space: 157076 Status: successful Version: 5.93-2 ──────────────────────────────────────────────────────────────────────────────── Finished at 20120515-0750 Build needed 00:50:09, 157076k disc space