mia-3dgetslice
{-i io
} {-o io
} [
options
...]
This program is used to extract 2D slices from a 3D data set and store them in separate files. Output files will be numbered according to their slice index.
input image(s) to be filtered. For supported file types see Plugin type: 3dimage/io
output image(s) base name, give without extension since this will be based on the '--type' option. For supported file types see Plugin type: 2dimage/io
output file type
start slice number
number of slices (all=0)
minimum number of digits of the file name numbers
slice direction (xy=axial, xz=coronal, yz=saggital)
xz: | get xz (coronal) slice |
yz: | get yz (saggital) slice |
xy: | get xy (axial) slice |
verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:
info: | Low level messages |
trace: | Function call trace |
fail: | Report test failures |
warning: | Warnings |
error: | Report errors |
debug: | Debug output |
message: | Normal messages |
fatal: | Report only fatal errors |
print copyright information
print this help
print a short help
print the version number and exit
Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).
Store 5 coronal slices starting at slice 120 coronalXXXX.png from image.v.
mia-3dgetslice -i image.v -o coronal -t png -n 5 -s 120
Gert Wollny