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Last update on 04. Dec 2013 .
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ARB_SECEDIT modes

OCCURRENCE

ARB_SECEDIT/mode buttons

 

DESCRIPTION

ZOOM MODE       Mode to zoom the displayed secondary structure.
  • You can zoom in by dragging a rectangle with the left mouse button.
  • You can zoom out by clicking or dragging the right mouse button.

HELIX MODE      Mode to build and destroy helix regions.
  • Left mouse button converts the clicked loop region into a helix region (if possible).
  • Right mouse button removes the clicked helix region.
  • Hint: If you display SAI: HELIX it's easy to detect the helix
          regions.

SET ROOT MODE

  • Left click on a loop which should be the fixpoint of your secondary structure. The root loop will not move if you create or remove helix region nor if you rotate branches of the secondary structure.
  • Right click onto a loop or helix to reset the angles between it and its neighbours.

ROTATE MODE

  • Left click onto a helix or loop to rotate it (and its complete substructure).
  • Use right click to rotate w/o rotating the substructure.

STRETCH MODE

  • Left click and drag a helix or loop to stretch or compress its size.
  • Right click to remove size constraints.

CONSTRAINT MODE

Left click on a helix or loop and edit its size constraints manually.

SET CURSOR MODE

Left click on a base character to set the cursor position in the primary structure editor.

PROBE INFO MODE

Left click on

 

NOTES

None

 

EXAMPLES

None

 

WARNINGS

None

 

BUGS

No bugs known