How to define the alignment detail visualized in the ARB_EDIT4 window?
Use the scroll bars:
click on the triangles to move one position left/right or
one line up/down drag the rectangles while keeping the
left mouse button pressed position the cursor in the
scroll bar area and press the middle mouse button
How to position the cursor:
-
to visualize the editor cursor, position the mouse cursor
and press the left button (note: the cursor is placed
between the sequences positions; counting is for the
position next right to the cursor)
-
to move the editor cursor (it has to be placed somewhere
before) to a given alignment position type a (position)
number in one of the 'Position' (absolute alignment
position - characters and gaps), 'E.coli' (homologous
position in the E. coli standard), 'Base' (position in the
current sequence - only characters, no gaps) or 'Helix #'
(5'-end of 3' helix half; type a '-' for 5'-end of the 5'
helix half) and move the mouse cursor back to the editing
area of the ARB_EDIT4 window.
-
to move the editor cursor to the next character (gap
symbols neglected) press the 'ctrl' and one of 'right',
'left', 'up' or 'down' keys.
How to compress and uncompress groups?
click (left mouse button) on the triangle on the top of
the group brackets
How to move sequences?
ensure the move mode has been activated (by pressing the
'MOVE' button; upper most in the left panel of the
ARB_EDIT4 window), position the mouse cursor
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