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Last update on 04. Dec 2013 .
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ARB Parsimony

OCCURRENCE

ARB_NT/Tree/Add species to existing tree/Parsimony ...

 

DESCRIPTION

In this release, 'ARB Parsimony' cannot be used to reconstruct new trees.

Existing trees can be optimized at different levels (depths) according to maximum parsimony criteria.

New sequences (species) can be placed rapidly into an existing tree. This can be done without changing that tree or allowing optimization at different levels according to maximum parsimony criteria including the new information for calculation.

Filters for the in- or exclusion of alignment columns ('ARB_NT/SAI; ARB_NT/Tree/Dist Matrix) can be selected.

After selecting one of the parsimony items in 'Tree/Add species to existing tree' the 'SET PARSIMONY OPTIONS' window appears:

  • Select the tree (to be modified) from the 'Tree:' subwindow.
  • Select an 'alignment' (see ´Glossary´) from the 'alignment:' subwindow.
  • To select a filter display the 'Select Filter' window pressing the button after the 'Filter:' prompt (see ´Select Filter´).
  • Press the <GO> button to display the 'ARB_PARSIMONY' window.

 

NOTES

None

 

EXAMPLES

None

 

WARNINGS

None

 

BUGS

No bugs known