sbuild (Debian sbuild) 0.62.6 (07 Dec 2011) on build01.raspbian.lan ╔══════════════════════════════════════════════════════════════════════════════╗ ║ minc 2.1.10-1 (armhf) 21 May 2012 21:40 ║ ╚══════════════════════════════════════════════════════════════════════════════╝ Package: minc Version: 2.1.10-1 Source Version: 2.1.10-1 Distribution: testing Architecture: armhf I: NOTICE: Log filtering will replace 'build/minc-r4qZ5S/minc-2.1.10' with '«PKGBUILDDIR»' I: NOTICE: Log filtering will replace 'build/minc-r4qZ5S' with '«BUILDDIR»' I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/testing-armhf-sbuild-bdac6cfb-942a-466e-be3f-24ad14caa0bb' with '«CHROOT»' ┌──────────────────────────────────────────────────────────────────────────────┐ │ Update chroot │ └──────────────────────────────────────────────────────────────────────────────┘ Hit http://repo.raspbian.lan testing InRelease Hit http://repo.raspbian.lan testing/main Sources Hit http://repo.raspbian.lan testing/main armhf Packages Ign http://repo.raspbian.lan testing/main TranslationIndex Ign http://repo.raspbian.lan testing/main Translation-en Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Fetch source files │ └──────────────────────────────────────────────────────────────────────────────┘ Check APT ───────── Checking available source versions... Download source files with APT ────────────────────────────── Reading package lists... Building dependency tree... Reading state information... NOTICE: 'minc' packaging is maintained in the 'Svn' version control system at: svn://svn.debian.org/svn/debian-med/trunk/packages/minc/trunk/ Need to get 1664 kB of source archives. Get:1 http://repo.raspbian.lan/raspbian/ testing/main minc 2.1.10-1 (dsc) [1490 B] Get:2 http://repo.raspbian.lan/raspbian/ testing/main minc 2.1.10-1 (tar) [1656 kB] Get:3 http://repo.raspbian.lan/raspbian/ testing/main minc 2.1.10-1 (diff) [6507 B] Fetched 1664 kB in 0s (8931 kB/s) Download complete and in download only mode Check arch ────────── Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-BNkLiK/apt_archive/sbuild-build-depends-core-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install core build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy debconf: delaying package configuration, since apt-utils is not installed 0 upgraded, 1 newly installed, 0 to remove and 16 not upgraded. Need to get 0 B/704 B of archives. After this operation, 0 B of additional disk space will be used. Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 10669 files and directories currently installed.) Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), autotools-dev, dh-autoreconf, libnetcdf-dev, zlib1g-dev, texlive-latex-base, libhdf5-dev Filtered Build-Depends: libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), autotools-dev, dh-autoreconf, libnetcdf-dev, zlib1g-dev, texlive-latex-base, libhdf5-dev dpkg-deb: building package `sbuild-build-depends-minc-dummy' in `/«BUILDDIR»/resolver-D44pow/apt_archive/sbuild-build-depends-minc-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install minc build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autoconf automake autotools-dev bsdmainutils debhelper dh-autoreconf ed file fontconfig-config gettext gettext-base groff-base hdf5-helpers html2text intltool-debian libcf0 libcroco3 libcurl3-gnutls libexpat1 libffi5 libfontconfig1 libfreetype6 libgcrypt11 libgfortran3 libglib2.0-0 libgnutls26 libgpg-error0 libgraphite3 libgssapi-krb5-2 libhdf5-7 libhdf5-dev libice6 libidn11 libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblcms1 libldap-2.4-2 libmagic1 libnetcdf-dev libnetcdfc++4 libnetcdfc7 libnetcdff5 libopenjpeg2 libp11-kit0 libpaper-utils libpaper1 libpcre3 libpipeline1 libpng12-0 libpoppler13 libptexenc1 librtmp0 libsasl2-2 libsm6 libssh2-1 libtasn1-3 libtool libunistring0 libx11-6 libx11-data libxau6 libxaw7 libxcb1 libxdmcp6 libxext6 libxml2 libxmu6 libxpm4 libxt6 luatex m4 man-db mime-support po-debconf tex-common texlive-base texlive-binaries texlive-common texlive-doc-base texlive-latex-base ttf-dejavu-core x11-common zlib1g-dev Suggested packages: autoconf2.13 autoconf-archive gnu-standards autoconf-doc wamerican wordlist whois vacation dh-make gettext-doc groff rng-tools krb5-doc krb5-user libhdf5-doc liblcms-utils netcdf-bin netcdf-doc libtool-doc automaken gfortran fortran95-compiler gcj less www-browser libmail-box-perl perl-tk xpdf-reader pdf-viewer ghostscript gv postscript-viewer Recommended packages: autopoint curl wget lynx-cur ca-certificates libglib2.0-data shared-mime-info krb5-locales pkg-config poppler-data libsasl2-modules libltdl-dev xml-core texlive-luatex libmail-sendmail-perl lmodern python ruby wish texlive-latex-base-doc The following NEW packages will be installed: autoconf automake autotools-dev bsdmainutils debhelper dh-autoreconf ed file fontconfig-config gettext gettext-base groff-base hdf5-helpers html2text intltool-debian libcf0 libcroco3 libcurl3-gnutls libexpat1 libffi5 libfontconfig1 libfreetype6 libgcrypt11 libgfortran3 libglib2.0-0 libgnutls26 libgpg-error0 libgraphite3 libgssapi-krb5-2 libhdf5-7 libhdf5-dev libice6 libidn11 libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblcms1 libldap-2.4-2 libmagic1 libnetcdf-dev libnetcdfc++4 libnetcdfc7 libnetcdff5 libopenjpeg2 libp11-kit0 libpaper-utils libpaper1 libpcre3 libpipeline1 libpng12-0 libpoppler13 libptexenc1 librtmp0 libsasl2-2 libsm6 libssh2-1 libtasn1-3 libtool libunistring0 libx11-6 libx11-data libxau6 libxaw7 libxcb1 libxdmcp6 libxext6 libxml2 libxmu6 libxpm4 libxt6 luatex m4 man-db mime-support po-debconf sbuild-build-depends-minc-dummy tex-common texlive-base texlive-binaries texlive-common texlive-doc-base texlive-latex-base ttf-dejavu-core x11-common zlib1g-dev debconf: delaying package configuration, since apt-utils is not installed 0 upgraded, 89 newly installed, 0 to remove and 16 not upgraded. Need to get 0 B/67.9 MB of archives. After this operation, 172 MB of additional disk space will be used. Selecting previously unselected package libpcre3:armhf. (Reading database ... 10669 files and directories currently installed.) Unpacking libpcre3:armhf (from .../libpcre3_1%3a8.30-5_armhf.deb) ... Selecting previously unselected package libpipeline1:armhf. Unpacking libpipeline1:armhf (from .../libpipeline1_1.2.1-1_armhf.deb) ... Selecting previously unselected package libgpg-error0:armhf. Unpacking libgpg-error0:armhf (from .../libgpg-error0_1.10-3_armhf.deb) ... Selecting previously unselected package libgcrypt11:armhf. Unpacking libgcrypt11:armhf (from .../libgcrypt11_1.5.0-3_armhf.deb) ... Selecting previously unselected package libp11-kit0:armhf. Unpacking libp11-kit0:armhf (from .../libp11-kit0_0.12-3_armhf.deb) ... Selecting previously unselected package libtasn1-3:armhf. Unpacking libtasn1-3:armhf (from .../libtasn1-3_2.12-1_armhf.deb) ... 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Unpacking sbuild-build-depends-minc-dummy (from .../sbuild-build-depends-minc-dummy.deb) ... Setting up libpcre3:armhf (1:8.30-5) ... Setting up libpipeline1:armhf (1.2.1-1) ... Setting up libgpg-error0:armhf (1.10-3) ... Setting up libgcrypt11:armhf (1.5.0-3) ... Setting up libp11-kit0:armhf (0.12-3) ... Setting up libtasn1-3:armhf (2.12-1) ... Setting up libgnutls26:armhf (2.12.19-1) ... Setting up libkrb5support0:armhf (1.10+dfsg~beta1-2) ... Setting up libk5crypto3:armhf (1.10+dfsg~beta1-2) ... Setting up libkeyutils1:armhf (1.5.5-2) ... Setting up libkrb5-3:armhf (1.10+dfsg~beta1-2) ... Setting up libgssapi-krb5-2:armhf (1.10+dfsg~beta1-2) ... Setting up libidn11:armhf (1.24-2) ... Setting up libsasl2-2:armhf (2.1.25.dfsg1-4) ... Setting up libldap-2.4-2:armhf (2.4.28-1.1+rpi1) ... Setting up libmagic1:armhf (5.11-1) ... Setting up libxml2:armhf (2.7.8.dfsg-9) ... Setting up libffi5:armhf (3.0.10-3+b3) ... Setting up libglib2.0-0:armhf (2.32.2-1) ... No schema files found: doing nothing. Setting up libcroco3:armhf (0.6.5-1) ... Setting up librtmp0:armhf (2.4+20111222.git4e06e21-1) ... Setting up libssh2-1:armhf (1.4.1-1) ... Setting up libcurl3-gnutls:armhf (7.25.0-1) ... Setting up libexpat1:armhf (2.1.0-1) ... Setting up libfreetype6:armhf (2.4.9-1) ... Setting up ttf-dejavu-core (2.33-2) ... Setting up fontconfig-config (2.9.0-3) ... Setting up libfontconfig1:armhf (2.9.0-3) ... Setting up libgfortran3:armhf (4.7.0-1.1+rpi) ... Setting up x11-common (1:7.6+13) ... All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6:armhf (2:1.0.8-2) ... Setting up libjpeg8:armhf (8d-1) ... Setting up libpaper1:armhf (1.1.24+nmu2) ... Creating config file /etc/papersize with new version Setting up libpng12-0:armhf (1.2.49-1) ... Setting up libsm6:armhf (2:1.2.1-2) ... Setting up libunistring0:armhf (0.9.3-5) ... Setting up libxau6:armhf (1:1.0.7-1) ... Setting up libxdmcp6:armhf (1:1.1.1-1) ... Setting up libxcb1:armhf (1.8.1-1) ... Setting up libx11-data (2:1.4.99.901-2) ... Setting up libx11-6:armhf (2:1.4.99.901-2) ... Setting up libxext6:armhf (2:1.3.1-2) ... Setting up libxt6:armhf (1:1.1.3-1) ... Setting up libxmu6:armhf (2:1.1.1-1) ... Setting up libxpm4:armhf (1:3.5.10-1) ... Setting up libxaw7:armhf (2:1.0.10-2) ... Setting up bsdmainutils (9.0.1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up groff-base (1.21-7) ... Setting up man-db (2.6.1-2) ... Building database of manual pages ... Setting up file (5.11-1) ... Setting up gettext-base (0.18.1.1-5+rpi1) ... Setting up m4 (1.4.16-3) ... Setting up mime-support (3.52-1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode. Setting up autoconf (2.69-1) ... Setting up autotools-dev (20120210.1) ... Setting up automake (1:1.11.5-1) ... update-alternatives: using /usr/bin/automake-1.11 to provide /usr/bin/automake (automake) in auto mode. Setting up html2text (1.3.2a-15) ... Setting up gettext (0.18.1.1-5+rpi1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2) ... Setting up debhelper (9.20120419) ... Setting up libtool (2.4.2-1+b2) ... Setting up dh-autoreconf (6) ... Setting up ed (1.6-1) ... Setting up hdf5-helpers (1.8.8-9) ... Setting up libcf0 (1:4.1.3-6) ... Setting up libgraphite3 (1:2.3.1-0.2) ... Setting up libhdf5-7 (1.8.8-9) ... Setting up zlib1g-dev:armhf (1:1.2.7.dfsg-1) ... Setting up libjpeg8-dev:armhf (8d-1) ... Setting up libhdf5-dev (1.8.8-9) ... Setting up libkpathsea6 (2011.20120410-1) ... Setting up liblcms1 (1.19.dfsg-1) ... Setting up libnetcdfc7 (1:4.1.3-6) ... Setting up libnetcdff5 (1:4.1.3-6) ... Setting up libnetcdfc++4 (1:4.1.3-6) ... Setting up libnetcdf-dev (1:4.1.3-6) ... Setting up libpaper-utils (1.1.24+nmu2) ... Setting up libopenjpeg2 (1.3+dfsg-4) ... Setting up libpoppler13 (0.16.7-3) ... Setting up libptexenc1 (2011.20120410-1) ... Setting up luatex (0.70.1-3) ... texlive-base is not ready, cannot create formats Setting up tex-common (3.11) ... Running mktexlsr. This may take some time... done. texlive-base is not ready, delaying updmap-sys call texlive-base is not ready, skipping fmtutil-sys --all call Setting up texlive-common (2011.20120424-1) ... Setting up texlive-doc-base (2011.20120424-1) ... Setting up texlive-binaries (2011.20120410-1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode. update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode. Building format(s) --refresh. This may take some time... done. Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Setting up texlive-base (2011.20120424-1) ... /usr/bin/tl-paper: setting paper size for dvips to a4. /usr/bin/tl-paper: setting paper size for dvipdfmx to a4. /usr/bin/tl-paper: setting paper size for xdvi to a4. /usr/bin/tl-paper: setting paper size for pdftex to a4. Running mktexlsr. This may take some time... done. Building format(s) --all. This may take some time... done. Processing triggers for tex-common ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Setting up texlive-latex-base (2011.20120424-1) ... Running mktexlsr. This may take some time... done. Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-latex-base.cnf. This may take some time... done. Processing triggers for tex-common ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Setting up sbuild-build-depends-minc-dummy (0.invalid.0) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build environment │ └──────────────────────────────────────────────────────────────────────────────┘ Kernel: Linux 3.2.0-2-mx5 armhf (armv7l) Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1.1+rpi2 gcc-4.6_4.6.3-1.1+rpi2 libc6-dev_2.13-32 libstdc++6_4.7.0-1.1+rpi libstdc++6-4.6-dev_4.6.3-1.1+rpi2 linux-libc-dev_3.2.12-1 Package versions: apt_0.8.15.10 autoconf_2.69-1 automake_1:1.11.5-1 autotools-dev_20120210.1 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1.1+rpi2 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 dh-autoreconf_6 diffutils_1:3.2-2 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 ed_1.6-1 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 fontconfig-config_2.9.0-3 g++_4:4.6.2-4 g++-4.6_4.6.3-1.1+rpi2 gcc_4:4.6.2-4 gcc-4.4-base_4.4.7-1.1+rpi1 gcc-4.5-base_4.5.3-12+rpi1 gcc-4.6_4.6.3-1.1+rpi2 gcc-4.6-base_4.6.3-1.1+rpi2 gcc-4.7-base_4.7.0-1.1+rpi gettext_0.18.1.1-5+rpi1 gettext-base_0.18.1.1-5+rpi1 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hdf5-helpers_1.8.8-9 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-32 libc-dev-bin_2.13-32 libc6_2.13-32 libc6-dev_2.13-32 libcf0_1:4.1.3-6 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libcurl3-gnutls_7.25.0-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libexpat1_2.1.0-1 libffi5_3.0.10-3+b3 libfile-fcntllock-perl_0.14-1 libfontconfig1_2.9.0-3 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-1.1+rpi libgcrypt11_1.5.0-3 libgdbm3_1.8.3-10 libgfortran3_4.7.0-1.1+rpi libglib2.0-0_2.32.2-1 libgmp10_2:5.0.5+dfsg-1.1 libgnutls26_2.12.19-1 libgomp1_4.7.0-1.1+rpi libgpg-error0_1.10-3 libgraphite3_1:2.3.1-0.2 libgssapi-krb5-2_1.10+dfsg~beta1-2 libhdf5-7_1.8.8-9 libhdf5-dev_1.8.8-9 libice6_2:1.0.8-2 libidn11_1.24-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 libk5crypto3_1.10+dfsg~beta1-2 libkeyutils1_1.5.5-2 libkpathsea6_2011.20120410-1 libkrb5-3_1.10+dfsg~beta1-2 libkrb5support0_1.10+dfsg~beta1-2 liblcms1_1.19.dfsg-1 libldap-2.4-2_2.4.28-1.1+rpi1 liblocale-gettext-perl_1.05-7 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-7 libncursesw5_5.9-7 libnetcdf-dev_1:4.1.3-6 libnetcdfc++4_1:4.1.3-6 libnetcdfc7_1:4.1.3-6 libnetcdff5_1:4.1.3-6 libopenjpeg2_1.3+dfsg-4 libp11-kit0_0.12-3 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7.1 libpaper-utils_1.1.24+nmu2 libpaper1_1.1.24+nmu2 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libpng12-0_1.2.49-1 libpoppler13_0.16.7-3 libptexenc1_2011.20120410-1 libreadline6_6.2-8 librtmp0_2.4+20111222.git4e06e21-1 libsasl2-2_2.1.25.dfsg1-4 libselinux1_2.1.9-2 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-3 libslang2_2.2.4-10 libsm6_2:1.2.1-2 libss2_1.42.2-2 libssh2-1_1.4.1-1 libstdc++6_4.7.0-1.1+rpi libstdc++6-4.6-dev_4.6.3-1.1+rpi2 libswitch-perl_2.16-2 libtasn1-3_2.12-1 libtext-charwidth-perl_0.04-7 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-7 libtool_2.4.2-1+b2 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.99.901-2 libx11-data_2:1.4.99.901-2 libxau6_1:1.0.7-1 libxaw7_2:1.0.10-2 libxcb1_1.8.1-1 libxdmcp6_1:1.1.1-1 libxext6_2:1.3.1-2 libxml2_2.7.8.dfsg-9 libxmu6_2:1.1.1-1 libxpm4_1:3.5.10-1 libxt6_1:1.1.3-1 linux-libc-dev_3.2.12-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 luatex_0.70.1-3 m4_1.4.16-3 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-17 mime-support_3.52-1 mount_2.20.1-4 multiarch-support_2.13-30 ncurses-base_5.9-6 ncurses-bin_5.9-7 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-minc-dummy_0.invalid.0 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tex-common_3.11 texlive-base_2011.20120424-1 texlive-binaries_2011.20120410-1 texlive-common_2011.20120424-1 texlive-doc-base_2011.20120424-1 texlive-latex-base_2011.20120424-1 ttf-dejavu-core_2.33-2 tzdata_2012c-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 x11-common_1:7.6+13 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build │ └──────────────────────────────────────────────────────────────────────────────┘ Unpack source ───────────── gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error gpgv: Signature made Sun Feb 26 08:04:10 2012 UTC using DSA key ID 21DB31C5 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./minc_2.1.10-1.dsc dpkg-source: info: extracting minc in minc-2.1.10 dpkg-source: info: unpacking minc_2.1.10.orig.tar.gz dpkg-source: info: unpacking minc_2.1.10-1.debian.tar.gz dpkg-source: info: applying 01_mincedit-sensible-viewer.diff dpkg-source: info: applying hdfv2-fixes.patch Check disc space ──────────────── Sufficient free space for build User Environment ──────────────── HOME=/sbuild-nonexistent LOGNAME=buildd PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/X11R6/bin:/usr/games SCHROOT_CHROOT_NAME=testing-armhf-sbuild SCHROOT_COMMAND=env SCHROOT_GID=108 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=testing-armhf-sbuild-bdac6cfb-942a-466e-be3f-24ad14caa0bb SCHROOT_UID=106 SCHROOT_USER=buildd SHELL=/bin/sh TERM=xterm USER=buildd dpkg-buildpackage ───────────────── dpkg-buildpackage: source package minc dpkg-buildpackage: source version 2.1.10-1 dpkg-source --before-build minc-2.1.10 dpkg-buildpackage: host architecture armhf fakeroot debian/rules clean dh clean --parallel --with autotools_dev dh_testdir -O--parallel dh_auto_clean -O--parallel dh_autotools-dev_restoreconfig -O--parallel dh_clean -O--parallel debian/rules build-arch dh build-arch --parallel --with autotools_dev dh_testdir -a -O--parallel dh_autotools-dev_updateconfig -a -O--parallel debian/rules override_dh_auto_configure make[1]: Entering directory `/«PKGBUILDDIR»' dh_auto_configure -- --enable-shared --enable-minc2 --enable-acr-nema CFLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security" configure: WARNING: unrecognized options: --disable-maintainer-mode, --enable-minc2 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking dependency style of gcc... none checking whether gcc and cc understand -c and -o together... yes checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... no checking for g95... no checking for xlf95... no checking for f95... no checking for fort... no checking for ifort... no checking for ifc... no checking for efc... no checking for pgfortran... no checking for pgf95... no checking for lf95... no checking for ftn... no checking whether we are using the GNU Fortran 77 compiler... no checking whether accepts -g... no checking for flex... no checking for lex... no checking for bison... no checking for byacc... no checking whether time.h and sys/time.h may both be included... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for sys/stat.h... (cached) yes checking sys/wait.h usability... yes checking sys/wait.h presence... yes checking for sys/wait.h... yes checking for unistd.h... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking pwd.h usability... yes checking pwd.h presence... yes checking for pwd.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking values.h usability... yes checking values.h presence... yes checking for values.h... yes checking for int32_t... yes checking for int16_t... yes checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking for a sed that does not truncate output... /bin/sed checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 805306365 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for ar... ar checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for dlfcn.h... yes checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... no checking for g95... no checking for xlf95... no checking for f95... no checking for fort... no checking for ifort... no checking for ifc... no checking for efc... no checking for pgfortran... no checking for pgf95... no checking for lf95... no checking for ftn... no checking whether we are using the GNU Fortran 77 compiler... (cached) no checking whether accepts -g... (cached) no checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for pod2man... /usr/bin/pod2man checking for library m... yes checking for library netcdf... yes checking for library z... yes checking for library hdf5... yes checking for strdup... yes checking for mkstemp... yes checking for tempnam... yes checking for tmpnam... yes checking for getpwnam... yes checking for select... yes checking for strerror... yes checking for sysconf... yes checking for pid_t... yes checking vfork.h usability... no checking vfork.h presence... no checking for vfork.h... no checking for fork... yes checking for vfork... yes checking for working fork... yes checking for working vfork... (cached) yes checking for system... yes checking for popen... yes configure: creating ./config.status config.status: creating Makefile config.status: creating epm-header config.status: creating doc/Makefile config.status: creating testdir/Makefile config.status: creating libsrc2/test/Makefile config.status: creating volume_io/Makefile config.status: creating volume_io/Documentation/Makefile config.status: creating volume_io/Testing/Makefile config.status: creating progs/xfm/xfmflip config.status: creating progs/minccomplete/minccomplete config.status: creating progs/minchistory/minchistory config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode, --enable-minc2 make[1]: Leaving directory `/«PKGBUILDDIR»' dh_auto_build -a -O--parallel make[1]: Entering directory `/«PKGBUILDDIR»' make all-recursive make[2]: Entering directory `/«PKGBUILDDIR»' Making all in . make[3]: Entering directory `/«PKGBUILDDIR»' /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/ParseArgv.lo libsrc/ParseArgv.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/ParseArgv.c -fPIC -DPIC -o libsrc/.libs/ParseArgv.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/ParseArgv.c -o libsrc/ParseArgv.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/read_file_names.lo libsrc/read_file_names.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/read_file_names.c -fPIC -DPIC -o libsrc/.libs/read_file_names.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/read_file_names.c -o libsrc/read_file_names.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/dim_conversion.lo libsrc/dim_conversion.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/dim_conversion.c -fPIC -DPIC -o libsrc/.libs/dim_conversion.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/dim_conversion.c -o libsrc/dim_conversion.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/image_conversion.lo libsrc/image_conversion.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/image_conversion.c -fPIC -DPIC -o libsrc/.libs/image_conversion.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/image_conversion.c -o libsrc/image_conversion.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/minc_convenience.lo libsrc/minc_convenience.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_convenience.c -fPIC -DPIC -o libsrc/.libs/minc_convenience.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_convenience.c -o libsrc/minc_convenience.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/minc_error.lo libsrc/minc_error.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_error.c -fPIC -DPIC -o libsrc/.libs/minc_error.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_error.c -o libsrc/minc_error.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/nd_loop.lo libsrc/nd_loop.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/nd_loop.c -fPIC -DPIC -o libsrc/.libs/nd_loop.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/nd_loop.c -o libsrc/nd_loop.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/netcdf_convenience.lo libsrc/netcdf_convenience.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/netcdf_convenience.c -fPIC -DPIC -o libsrc/.libs/netcdf_convenience.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/netcdf_convenience.c -o libsrc/netcdf_convenience.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/time_stamp.lo libsrc/time_stamp.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/time_stamp.c -fPIC -DPIC -o libsrc/.libs/time_stamp.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/time_stamp.c -o libsrc/time_stamp.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/value_conversion.lo libsrc/value_conversion.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/value_conversion.c -fPIC -DPIC -o libsrc/.libs/value_conversion.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/value_conversion.c -o libsrc/value_conversion.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/voxel_loop.lo libsrc/voxel_loop.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/voxel_loop.c -fPIC -DPIC -o libsrc/.libs/voxel_loop.o libsrc/voxel_loop.c: In function 'voxel_loop': libsrc/voxel_loop.c:360:4: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat] libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/voxel_loop.c -o libsrc/voxel_loop.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/hdf_convenience.lo libsrc/hdf_convenience.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/hdf_convenience.c -fPIC -DPIC -o libsrc/.libs/hdf_convenience.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/hdf_convenience.c -o libsrc/hdf_convenience.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/minc_compat.lo libsrc/minc_compat.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_compat.c -fPIC -DPIC -o libsrc/.libs/minc_compat.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_compat.c -o libsrc/minc_compat.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/minc_simple.lo libsrc/minc_simple.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_simple.c -fPIC -DPIC -o libsrc/.libs/minc_simple.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_simple.c -o libsrc/minc_simple.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/convert.lo libsrc2/convert.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/convert.c -fPIC -DPIC -o libsrc2/.libs/convert.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/convert.c -o libsrc2/convert.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/datatype.lo libsrc2/datatype.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/datatype.c -fPIC -DPIC -o libsrc2/.libs/datatype.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/datatype.c -o libsrc2/datatype.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/dimension.lo libsrc2/dimension.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/dimension.c -fPIC -DPIC -o libsrc2/.libs/dimension.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/dimension.c -o libsrc2/dimension.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/free.lo libsrc2/free.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/free.c -fPIC -DPIC -o libsrc2/.libs/free.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/free.c -o libsrc2/free.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/grpattr.lo libsrc2/grpattr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/grpattr.c -fPIC -DPIC -o libsrc2/.libs/grpattr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/grpattr.c -o libsrc2/grpattr.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/hyper.lo libsrc2/hyper.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/hyper.c -fPIC -DPIC -o libsrc2/.libs/hyper.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/hyper.c -o libsrc2/hyper.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/label.lo libsrc2/label.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/label.c -fPIC -DPIC -o libsrc2/.libs/label.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/label.c -o libsrc2/label.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/m2util.lo libsrc2/m2util.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/m2util.c -fPIC -DPIC -o libsrc2/.libs/m2util.o libsrc2/m2util.c: In function 'minc_update_thumbnail': libsrc2/m2util.c:1627:32: warning: passing argument 4 of 'H5Sselect_elements' from incompatible pointer type [enabled by default] /usr/include/H5Spublic.h:128:15: note: expected 'const hsize_t *' but argument is of type 'const hsize_t **' libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/m2util.c -o libsrc2/m2util.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/record.lo libsrc2/record.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/record.c -fPIC -DPIC -o libsrc2/.libs/record.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/record.c -o libsrc2/record.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/slice.lo libsrc2/slice.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/slice.c -fPIC -DPIC -o libsrc2/.libs/slice.o libsrc2/slice.c: In function 'mirw_slice_minmax': libsrc2/slice.c:87:5: warning: passing argument 4 of 'H5Sselect_elements' from incompatible pointer type [enabled by default] /usr/include/H5Spublic.h:128:15: note: expected 'const hsize_t *' but argument is of type 'const hsize_t **' libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/slice.c -o libsrc2/slice.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/valid.lo libsrc2/valid.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/valid.c -fPIC -DPIC -o libsrc2/.libs/valid.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/valid.c -o libsrc2/valid.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/volprops.lo libsrc2/volprops.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/volprops.c -fPIC -DPIC -o libsrc2/.libs/volprops.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/volprops.c -o libsrc2/volprops.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/volume.lo libsrc2/volume.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/volume.c -fPIC -DPIC -o libsrc2/.libs/volume.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/volume.c -o libsrc2/volume.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -version-info 2:3:1 -Wl,-z,relro -o libminc2.la -rpath /usr/lib/arm-linux-gnueabihf libsrc/ParseArgv.lo libsrc/read_file_names.lo libsrc/dim_conversion.lo libsrc/image_conversion.lo libsrc/minc_convenience.lo libsrc/minc_error.lo libsrc/nd_loop.lo libsrc/netcdf_convenience.lo libsrc/time_stamp.lo libsrc/value_conversion.lo libsrc/voxel_loop.lo libsrc/hdf_convenience.lo libsrc/minc_compat.lo libsrc/minc_simple.lo libsrc2/convert.lo libsrc2/datatype.lo libsrc2/dimension.lo libsrc2/free.lo libsrc2/grpattr.lo libsrc2/hyper.lo libsrc2/label.lo libsrc2/m2util.lo libsrc2/record.lo libsrc2/slice.lo libsrc2/valid.lo libsrc2/volprops.lo libsrc2/volume.lo -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -shared libsrc/.libs/ParseArgv.o libsrc/.libs/read_file_names.o libsrc/.libs/dim_conversion.o libsrc/.libs/image_conversion.o libsrc/.libs/minc_convenience.o libsrc/.libs/minc_error.o libsrc/.libs/nd_loop.o libsrc/.libs/netcdf_convenience.o libsrc/.libs/time_stamp.o libsrc/.libs/value_conversion.o libsrc/.libs/voxel_loop.o libsrc/.libs/hdf_convenience.o libsrc/.libs/minc_compat.o libsrc/.libs/minc_simple.o libsrc2/.libs/convert.o libsrc2/.libs/datatype.o libsrc2/.libs/dimension.o libsrc2/.libs/free.o libsrc2/.libs/grpattr.o libsrc2/.libs/hyper.o libsrc2/.libs/label.o libsrc2/.libs/m2util.o libsrc2/.libs/record.o libsrc2/.libs/slice.o libsrc2/.libs/valid.o libsrc2/.libs/volprops.o libsrc2/.libs/volume.o -lhdf5 -lz -lnetcdf -lm -Wl,-z -Wl,relro -Wl,-soname -Wl,libminc2.so.1 -o .libs/libminc2.so.1.1.3 libtool: link: (cd ".libs" && rm -f "libminc2.so.1" && ln -s "libminc2.so.1.1.3" "libminc2.so.1") libtool: link: (cd ".libs" && rm -f "libminc2.so" && ln -s "libminc2.so.1.1.3" "libminc2.so") libtool: link: ar cru .libs/libminc2.a libsrc/ParseArgv.o libsrc/read_file_names.o libsrc/dim_conversion.o libsrc/image_conversion.o libsrc/minc_convenience.o libsrc/minc_error.o libsrc/nd_loop.o libsrc/netcdf_convenience.o libsrc/time_stamp.o libsrc/value_conversion.o libsrc/voxel_loop.o libsrc/hdf_convenience.o libsrc/minc_compat.o libsrc/minc_simple.o libsrc2/convert.o libsrc2/datatype.o libsrc2/dimension.o libsrc2/free.o libsrc2/grpattr.o libsrc2/hyper.o libsrc2/label.o libsrc2/m2util.o libsrc2/record.o libsrc2/slice.o libsrc2/valid.o libsrc2/volprops.o libsrc2/volume.o libtool: link: ranlib .libs/libminc2.a libtool: link: ( cd ".libs" && rm -f "libminc2.la" && ln -s "../libminc2.la" "libminc2.la" ) /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/colour.lo volume_io/Geometry/colour.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/colour.c -fPIC -DPIC -o volume_io/Geometry/.libs/colour.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/colour.c -o volume_io/Geometry/colour.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/colour_def.lo volume_io/Geometry/colour_def.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/colour_def.c -fPIC -DPIC -o volume_io/Geometry/.libs/colour_def.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/colour_def.c -o volume_io/Geometry/colour_def.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/gaussian.lo volume_io/Geometry/gaussian.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/gaussian.c -fPIC -DPIC -o volume_io/Geometry/.libs/gaussian.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/gaussian.c -o volume_io/Geometry/gaussian.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/inverse.lo volume_io/Geometry/inverse.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/inverse.c -fPIC -DPIC -o volume_io/Geometry/.libs/inverse.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/inverse.c -o volume_io/Geometry/inverse.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/newton.lo volume_io/Geometry/newton.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/newton.c -fPIC -DPIC -o volume_io/Geometry/.libs/newton.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/newton.c -o volume_io/Geometry/newton.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/points.lo volume_io/Geometry/points.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/points.c -fPIC -DPIC -o volume_io/Geometry/.libs/points.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/points.c -o volume_io/Geometry/points.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/splines.lo volume_io/Geometry/splines.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/splines.c -fPIC -DPIC -o volume_io/Geometry/.libs/splines.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/splines.c -o volume_io/Geometry/splines.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/tensors.lo volume_io/Geometry/tensors.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/tensors.c -fPIC -DPIC -o volume_io/Geometry/.libs/tensors.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/tensors.c -o volume_io/Geometry/tensors.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/transforms.lo volume_io/Geometry/transforms.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/transforms.c -fPIC -DPIC -o volume_io/Geometry/.libs/transforms.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/transforms.c -o volume_io/Geometry/transforms.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/MNI_formats/gen_xf_io.lo volume_io/MNI_formats/gen_xf_io.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/gen_xf_io.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/gen_xf_io.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/gen_xf_io.c -o volume_io/MNI_formats/gen_xf_io.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/MNI_formats/gen_xfs.lo volume_io/MNI_formats/gen_xfs.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/gen_xfs.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/gen_xfs.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/gen_xfs.c -o volume_io/MNI_formats/gen_xfs.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/MNI_formats/grid_transforms.lo volume_io/MNI_formats/grid_transforms.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/grid_transforms.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/grid_transforms.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/grid_transforms.c -o volume_io/MNI_formats/grid_transforms.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/MNI_formats/mni_io.lo volume_io/MNI_formats/mni_io.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/mni_io.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/mni_io.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/mni_io.c -o volume_io/MNI_formats/mni_io.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/MNI_formats/tag_points.lo volume_io/MNI_formats/tag_points.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/tag_points.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/tag_points.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/tag_points.c -o volume_io/MNI_formats/tag_points.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/MNI_formats/thin_plate_spline.lo volume_io/MNI_formats/thin_plate_spline.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/thin_plate_spline.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/thin_plate_spline.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/thin_plate_spline.c -o volume_io/MNI_formats/thin_plate_spline.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/alloc.lo volume_io/Prog_utils/alloc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/alloc.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/alloc.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/alloc.c -o volume_io/Prog_utils/alloc.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/alloc_check.lo volume_io/Prog_utils/alloc_check.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/alloc_check.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/alloc_check.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/alloc_check.c -o volume_io/Prog_utils/alloc_check.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/arrays.lo volume_io/Prog_utils/arrays.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/arrays.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/arrays.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/arrays.c -o volume_io/Prog_utils/arrays.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/files.lo volume_io/Prog_utils/files.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/files.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/files.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/files.c -o volume_io/Prog_utils/files.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/print.lo volume_io/Prog_utils/print.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/print.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/print.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/print.c -o volume_io/Prog_utils/print.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/progress.lo volume_io/Prog_utils/progress.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/progress.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/progress.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/progress.c -o volume_io/Prog_utils/progress.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/string.lo volume_io/Prog_utils/string.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/string.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/string.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/string.c -o volume_io/Prog_utils/string.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/time.lo volume_io/Prog_utils/time.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/time.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/time.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/time.c -o volume_io/Prog_utils/time.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/evaluate.lo volume_io/Volumes/evaluate.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/evaluate.c -fPIC -DPIC -o volume_io/Volumes/.libs/evaluate.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/evaluate.c -o volume_io/Volumes/evaluate.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/get_hyperslab.lo volume_io/Volumes/get_hyperslab.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/get_hyperslab.c -fPIC -DPIC -o volume_io/Volumes/.libs/get_hyperslab.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/get_hyperslab.c -o volume_io/Volumes/get_hyperslab.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/input_free.lo volume_io/Volumes/input_free.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/input_free.c -fPIC -DPIC -o volume_io/Volumes/.libs/input_free.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/input_free.c -o volume_io/Volumes/input_free.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/input_mnc.lo volume_io/Volumes/input_mnc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/input_mnc.c -fPIC -DPIC -o volume_io/Volumes/.libs/input_mnc.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/input_mnc.c -o volume_io/Volumes/input_mnc.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/input_volume.lo volume_io/Volumes/input_volume.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/input_volume.c -fPIC -DPIC -o volume_io/Volumes/.libs/input_volume.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/input_volume.c -o volume_io/Volumes/input_volume.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/multidim_arrays.lo volume_io/Volumes/multidim_arrays.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/multidim_arrays.c -fPIC -DPIC -o volume_io/Volumes/.libs/multidim_arrays.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/multidim_arrays.c -o volume_io/Volumes/multidim_arrays.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/output_mnc.lo volume_io/Volumes/output_mnc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/output_mnc.c -fPIC -DPIC -o volume_io/Volumes/.libs/output_mnc.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/output_mnc.c -o volume_io/Volumes/output_mnc.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/output_volume.lo volume_io/Volumes/output_volume.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/output_volume.c -fPIC -DPIC -o volume_io/Volumes/.libs/output_volume.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/output_volume.c -o volume_io/Volumes/output_volume.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/set_hyperslab.lo volume_io/Volumes/set_hyperslab.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/set_hyperslab.c -fPIC -DPIC -o volume_io/Volumes/.libs/set_hyperslab.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/set_hyperslab.c -o volume_io/Volumes/set_hyperslab.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/volume_cache.lo volume_io/Volumes/volume_cache.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/volume_cache.c -fPIC -DPIC -o volume_io/Volumes/.libs/volume_cache.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/volume_cache.c -o volume_io/Volumes/volume_cache.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/volumes.lo volume_io/Volumes/volumes.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/volumes.c -fPIC -DPIC -o volume_io/Volumes/.libs/volumes.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/volumes.c -o volume_io/Volumes/volumes.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -version-info 2:2:1 -Wl,-z,relro -o libvolume_io2.la -rpath /usr/lib/arm-linux-gnueabihf volume_io/Geometry/colour.lo volume_io/Geometry/colour_def.lo volume_io/Geometry/gaussian.lo volume_io/Geometry/inverse.lo volume_io/Geometry/newton.lo volume_io/Geometry/points.lo volume_io/Geometry/splines.lo volume_io/Geometry/tensors.lo volume_io/Geometry/transforms.lo volume_io/MNI_formats/gen_xf_io.lo volume_io/MNI_formats/gen_xfs.lo volume_io/MNI_formats/grid_transforms.lo volume_io/MNI_formats/mni_io.lo volume_io/MNI_formats/tag_points.lo volume_io/MNI_formats/thin_plate_spline.lo volume_io/Prog_utils/alloc.lo volume_io/Prog_utils/alloc_check.lo volume_io/Prog_utils/arrays.lo volume_io/Prog_utils/files.lo volume_io/Prog_utils/print.lo volume_io/Prog_utils/progress.lo volume_io/Prog_utils/string.lo volume_io/Prog_utils/time.lo volume_io/Volumes/evaluate.lo volume_io/Volumes/get_hyperslab.lo volume_io/Volumes/input_free.lo volume_io/Volumes/input_mnc.lo volume_io/Volumes/input_volume.lo volume_io/Volumes/multidim_arrays.lo volume_io/Volumes/output_mnc.lo volume_io/Volumes/output_volume.lo volume_io/Volumes/set_hyperslab.lo volume_io/Volumes/volume_cache.lo volume_io/Volumes/volumes.lo -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -shared volume_io/Geometry/.libs/colour.o volume_io/Geometry/.libs/colour_def.o volume_io/Geometry/.libs/gaussian.o volume_io/Geometry/.libs/inverse.o volume_io/Geometry/.libs/newton.o volume_io/Geometry/.libs/points.o volume_io/Geometry/.libs/splines.o volume_io/Geometry/.libs/tensors.o volume_io/Geometry/.libs/transforms.o volume_io/MNI_formats/.libs/gen_xf_io.o volume_io/MNI_formats/.libs/gen_xfs.o volume_io/MNI_formats/.libs/grid_transforms.o volume_io/MNI_formats/.libs/mni_io.o volume_io/MNI_formats/.libs/tag_points.o volume_io/MNI_formats/.libs/thin_plate_spline.o volume_io/Prog_utils/.libs/alloc.o volume_io/Prog_utils/.libs/alloc_check.o volume_io/Prog_utils/.libs/arrays.o volume_io/Prog_utils/.libs/files.o volume_io/Prog_utils/.libs/print.o volume_io/Prog_utils/.libs/progress.o volume_io/Prog_utils/.libs/string.o volume_io/Prog_utils/.libs/time.o volume_io/Volumes/.libs/evaluate.o volume_io/Volumes/.libs/get_hyperslab.o volume_io/Volumes/.libs/input_free.o volume_io/Volumes/.libs/input_mnc.o volume_io/Volumes/.libs/input_volume.o volume_io/Volumes/.libs/multidim_arrays.o volume_io/Volumes/.libs/output_mnc.o volume_io/Volumes/.libs/output_volume.o volume_io/Volumes/.libs/set_hyperslab.o volume_io/Volumes/.libs/volume_cache.o volume_io/Volumes/.libs/volumes.o -lhdf5 -lz -lnetcdf -lm -Wl,-z -Wl,relro -Wl,-soname -Wl,libvolume_io2.so.1 -o .libs/libvolume_io2.so.1.1.2 libtool: link: (cd ".libs" && rm -f "libvolume_io2.so.1" && ln -s "libvolume_io2.so.1.1.2" "libvolume_io2.so.1") libtool: link: (cd ".libs" && rm -f "libvolume_io2.so" && ln -s "libvolume_io2.so.1.1.2" "libvolume_io2.so") libtool: link: ar cru .libs/libvolume_io2.a volume_io/Geometry/colour.o volume_io/Geometry/colour_def.o volume_io/Geometry/gaussian.o volume_io/Geometry/inverse.o volume_io/Geometry/newton.o volume_io/Geometry/points.o volume_io/Geometry/splines.o volume_io/Geometry/tensors.o volume_io/Geometry/transforms.o volume_io/MNI_formats/gen_xf_io.o volume_io/MNI_formats/gen_xfs.o volume_io/MNI_formats/grid_transforms.o volume_io/MNI_formats/mni_io.o volume_io/MNI_formats/tag_points.o volume_io/MNI_formats/thin_plate_spline.o volume_io/Prog_utils/alloc.o volume_io/Prog_utils/alloc_check.o volume_io/Prog_utils/arrays.o volume_io/Prog_utils/files.o volume_io/Prog_utils/print.o volume_io/Prog_utils/progress.o volume_io/Prog_utils/string.o volume_io/Prog_utils/time.o volume_io/Volumes/evaluate.o volume_io/Volumes/get_hyperslab.o volume_io/Volumes/input_free.o volume_io/Volumes/input_mnc.o volume_io/Volumes/input_volume.o volume_io/Volumes/multidim_arrays.o volume_io/Volumes/output_mnc.o volume_io/Volumes/output_volume.o volume_io/Volumes/set_hyperslab.o volume_io/Volumes/volume_cache.o volume_io/Volumes/volumes.o libtool: link: ranlib .libs/libvolume_io2.a libtool: link: ( cd ".libs" && rm -f "libvolume_io2.la" && ln -s "../libvolume_io2.la" "libvolume_io2.la" ) /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/acr_io.lo conversion/Acr_nema/acr_io.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/acr_io.c -fPIC -DPIC -o conversion/Acr_nema/.libs/acr_io.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/acr_io.c -o conversion/Acr_nema/acr_io.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/dicom_client_routines.lo conversion/Acr_nema/dicom_client_routines.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/dicom_client_routines.c -fPIC -DPIC -o conversion/Acr_nema/.libs/dicom_client_routines.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/dicom_client_routines.c -o conversion/Acr_nema/dicom_client_routines.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/dicom_network.lo conversion/Acr_nema/dicom_network.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/dicom_network.c -fPIC -DPIC -o conversion/Acr_nema/.libs/dicom_network.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/dicom_network.c -o conversion/Acr_nema/dicom_network.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/element.lo conversion/Acr_nema/element.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/element.c -fPIC -DPIC -o conversion/Acr_nema/.libs/element.o conversion/Acr_nema/element.c: In function 'acr_get_element_numeric_array': conversion/Acr_nema/element.c:1603:10: warning: ignoring return value of 'strtod', declared with attribute warn_unused_result [-Wunused-result] libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/element.c -o conversion/Acr_nema/element.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/file_io.lo conversion/Acr_nema/file_io.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/file_io.c -fPIC -DPIC -o conversion/Acr_nema/.libs/file_io.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/file_io.c -o conversion/Acr_nema/file_io.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/globals.lo conversion/Acr_nema/globals.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/globals.c -fPIC -DPIC -o conversion/Acr_nema/.libs/globals.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/globals.c -o conversion/Acr_nema/globals.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/group.lo conversion/Acr_nema/group.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/group.c -fPIC -DPIC -o conversion/Acr_nema/.libs/group.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/group.c -o conversion/Acr_nema/group.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/message.lo conversion/Acr_nema/message.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/message.c -fPIC -DPIC -o conversion/Acr_nema/.libs/message.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/message.c -o conversion/Acr_nema/message.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/value_repr.lo conversion/Acr_nema/value_repr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/value_repr.c -fPIC -DPIC -o conversion/Acr_nema/.libs/value_repr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/value_repr.c -o conversion/Acr_nema/value_repr.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o libacr_nema.la -rpath /usr/lib/arm-linux-gnueabihf conversion/Acr_nema/acr_io.lo conversion/Acr_nema/dicom_client_routines.lo conversion/Acr_nema/dicom_network.lo conversion/Acr_nema/element.lo conversion/Acr_nema/file_io.lo conversion/Acr_nema/globals.lo conversion/Acr_nema/group.lo conversion/Acr_nema/message.lo conversion/Acr_nema/value_repr.lo -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -shared conversion/Acr_nema/.libs/acr_io.o conversion/Acr_nema/.libs/dicom_client_routines.o conversion/Acr_nema/.libs/dicom_network.o conversion/Acr_nema/.libs/element.o conversion/Acr_nema/.libs/file_io.o conversion/Acr_nema/.libs/globals.o conversion/Acr_nema/.libs/group.o conversion/Acr_nema/.libs/message.o conversion/Acr_nema/.libs/value_repr.o -lhdf5 -lz -lnetcdf -lm -Wl,-z -Wl,relro -Wl,-soname -Wl,libacr_nema.so.0 -o .libs/libacr_nema.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libacr_nema.so.0" && ln -s "libacr_nema.so.0.0.0" "libacr_nema.so.0") libtool: link: (cd ".libs" && rm -f "libacr_nema.so" && ln -s "libacr_nema.so.0.0.0" "libacr_nema.so") libtool: link: ar cru .libs/libacr_nema.a conversion/Acr_nema/acr_io.o conversion/Acr_nema/dicom_client_routines.o conversion/Acr_nema/dicom_network.o conversion/Acr_nema/element.o conversion/Acr_nema/file_io.o conversion/Acr_nema/globals.o conversion/Acr_nema/group.o conversion/Acr_nema/message.o conversion/Acr_nema/value_repr.o libtool: link: ranlib .libs/libacr_nema.a libtool: link: ( cd ".libs" && rm -f "libacr_nema.la" && ln -s "../libacr_nema.la" "libacr_nema.la" ) gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/coordinates/voxeltoworld.o progs/coordinates/voxeltoworld.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o voxeltoworld progs/coordinates/voxeltoworld.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/voxeltoworld progs/coordinates/voxeltoworld.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/coordinates/worldtovoxel.o progs/coordinates/worldtovoxel.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o worldtovoxel progs/coordinates/worldtovoxel.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/worldtovoxel progs/coordinates/worldtovoxel.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minc_modify_header/minc_modify_header.o progs/minc_modify_header/minc_modify_header.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o minc_modify_header progs/minc_modify_header/minc_modify_header.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minc_modify_header progs/minc_modify_header/minc_modify_header.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincaverage/mincaverage.o progs/mincaverage/mincaverage.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincaverage progs/mincaverage/mincaverage.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincaverage progs/mincaverage/mincaverage.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-minccalc.o `test -f 'progs/minccalc/minccalc.c' || echo './'`progs/minccalc/minccalc.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-gram.o `test -f 'progs/minccalc/gram.c' || echo './'`progs/minccalc/gram.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-eval.o `test -f 'progs/minccalc/eval.c' || echo './'`progs/minccalc/eval.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-ident.o `test -f 'progs/minccalc/ident.c' || echo './'`progs/minccalc/ident.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-lex.o `test -f 'progs/minccalc/lex.c' || echo './'`progs/minccalc/lex.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-node.o `test -f 'progs/minccalc/node.c' || echo './'`progs/minccalc/node.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-optim.o `test -f 'progs/minccalc/optim.c' || echo './'`progs/minccalc/optim.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-scalar.o `test -f 'progs/minccalc/scalar.c' || echo './'`progs/minccalc/scalar.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-sym.o `test -f 'progs/minccalc/sym.c' || echo './'`progs/minccalc/sym.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-vector.o `test -f 'progs/minccalc/vector.c' || echo './'`progs/minccalc/vector.c /bin/bash ./libtool --tag=CC --mode=link gcc -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o minccalc progs/minccalc/minccalc-minccalc.o progs/minccalc/minccalc-gram.o progs/minccalc/minccalc-eval.o progs/minccalc/minccalc-ident.o progs/minccalc/minccalc-lex.o progs/minccalc/minccalc-node.o progs/minccalc/minccalc-optim.o progs/minccalc/minccalc-scalar.o progs/minccalc/minccalc-sym.o progs/minccalc/minccalc-vector.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minccalc progs/minccalc/minccalc-minccalc.o progs/minccalc/minccalc-gram.o progs/minccalc/minccalc-eval.o progs/minccalc/minccalc-ident.o progs/minccalc/minccalc-lex.o progs/minccalc/minccalc-node.o progs/minccalc/minccalc-optim.o progs/minccalc/minccalc-scalar.o progs/minccalc/minccalc-sym.o progs/minccalc/minccalc-vector.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccmp/minccmp.o progs/minccmp/minccmp.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o minccmp progs/minccmp/minccmp.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minccmp progs/minccmp/minccmp.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincconcat/mincconcat.o progs/mincconcat/mincconcat.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincconcat progs/mincconcat/mincconcat.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincconcat progs/mincconcat/mincconcat.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccopy/minccopy.o progs/minccopy/minccopy.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o minccopy progs/minccopy/minccopy.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minccopy progs/minccopy/minccopy.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincexpand/mincexpand.o progs/mincexpand/mincexpand.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincexpand progs/mincexpand/mincexpand.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincexpand progs/mincexpand/mincexpand.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincextract/mincextract.o progs/mincextract/mincextract.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincextract progs/mincextract/mincextract.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincextract progs/mincextract/mincextract.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/escapes.o progs/mincgen/escapes.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/genlib.o progs/mincgen/genlib.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/getfill.o progs/mincgen/getfill.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/init.o progs/mincgen/init.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/load.o progs/mincgen/load.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/main.o progs/mincgen/main.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/ncgentab.o progs/mincgen/ncgentab.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/ncgenyy.o progs/mincgen/ncgenyy.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincgen progs/mincgen/escapes.o progs/mincgen/genlib.o progs/mincgen/getfill.o progs/mincgen/init.o progs/mincgen/load.o progs/mincgen/main.o progs/mincgen/ncgentab.o progs/mincgen/ncgenyy.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincgen progs/mincgen/escapes.o progs/mincgen/genlib.o progs/mincgen/getfill.o progs/mincgen/init.o progs/mincgen/load.o progs/mincgen/main.o progs/mincgen/ncgentab.o progs/mincgen/ncgenyy.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincinfo/mincinfo.o progs/mincinfo/mincinfo.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincinfo progs/mincinfo/mincinfo.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincinfo progs/mincinfo/mincinfo.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minclookup/minclookup.o progs/minclookup/minclookup.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o minclookup progs/minclookup/minclookup.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minclookup progs/minclookup/minclookup.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincmakescalar/mincmakescalar.o progs/mincmakescalar/mincmakescalar.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincmakescalar progs/mincmakescalar/mincmakescalar.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincmakescalar progs/mincmakescalar/mincmakescalar.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincmakevector/mincmakevector.o progs/mincmakevector/mincmakevector.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincmakevector progs/mincmakevector/mincmakevector.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincmakevector progs/mincmakevector/mincmakevector.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincmath/mincmath.o progs/mincmath/mincmath.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincmath progs/mincmath/mincmath.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincmath progs/mincmath/mincmath.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincresample/mincresample.o progs/mincresample/mincresample.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincresample/resample_volumes.o progs/mincresample/resample_volumes.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/Proglib/convert_origin_to_start.o progs/Proglib/convert_origin_to_start.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincresample progs/mincresample/mincresample.o progs/mincresample/resample_volumes.o progs/Proglib/convert_origin_to_start.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincresample progs/mincresample/mincresample.o progs/mincresample/resample_volumes.o progs/Proglib/convert_origin_to_start.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincreshape/mincreshape.o progs/mincreshape/mincreshape.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincreshape/copy_data.o progs/mincreshape/copy_data.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincreshape progs/mincreshape/mincreshape.o progs/mincreshape/copy_data.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincreshape progs/mincreshape/mincreshape.o progs/mincreshape/copy_data.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincstats/mincstats.o progs/mincstats/mincstats.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincstats progs/mincstats/mincstats.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincstats progs/mincstats/mincstats.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minctoraw/minctoraw.o progs/minctoraw/minctoraw.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o minctoraw progs/minctoraw/minctoraw.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minctoraw progs/minctoraw/minctoraw.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincview/invert_raw_image.o progs/mincview/invert_raw_image.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o invert_raw_image progs/mincview/invert_raw_image.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/invert_raw_image progs/mincview/invert_raw_image.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincwindow/mincwindow.o progs/mincwindow/mincwindow.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincwindow progs/mincwindow/mincwindow.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincwindow progs/mincwindow/mincwindow.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/rawtominc/rawtominc.o progs/rawtominc/rawtominc.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o rawtominc progs/rawtominc/rawtominc.o progs/Proglib/convert_origin_to_start.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/rawtominc progs/rawtominc/rawtominc.o progs/Proglib/convert_origin_to_start.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/xfm/transformtags.o progs/xfm/transformtags.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o transformtags progs/xfm/transformtags.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/transformtags progs/xfm/transformtags.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/xfm/xfm2def.o progs/xfm/xfm2def.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o xfm2def progs/xfm/xfm2def.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/xfm2def progs/xfm/xfm2def.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/xfm/xfmconcat.o progs/xfm/xfmconcat.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o xfmconcat progs/xfm/xfmconcat.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/xfmconcat progs/xfm/xfmconcat.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/xfm/xfminvert.o progs/xfm/xfminvert.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o xfminvert progs/xfm/xfminvert.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/xfminvert progs/xfm/xfminvert.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincconvert/mincconvert.o progs/mincconvert/mincconvert.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincconvert progs/mincconvert/mincconvert.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincconvert progs/mincconvert/mincconvert.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincdump/mincdump.o progs/mincdump/mincdump.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincdump/vardata.o progs/mincdump/vardata.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincdump/dumplib.o progs/mincdump/dumplib.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincdump progs/mincdump/mincdump.o progs/mincdump/vardata.o progs/mincdump/dumplib.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincdump progs/mincdump/mincdump.o progs/mincdump/vardata.o progs/mincdump/dumplib.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/ecattominc/ecattominc.o conversion/ecattominc/ecattominc.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/ecattominc/insertblood.o conversion/ecattominc/insertblood.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/ecattominc/ecat_file.o conversion/ecattominc/ecat_file.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/ecattominc/machine_indep.o conversion/ecattominc/machine_indep.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o ecattominc conversion/ecattominc/ecattominc.o conversion/ecattominc/insertblood.o conversion/ecattominc/ecat_file.o conversion/ecattominc/machine_indep.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/ecattominc conversion/ecattominc/ecattominc.o conversion/ecattominc/insertblood.o conversion/ecattominc/ecat_file.o conversion/ecattominc/machine_indep.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/minctoecat/minctoecat.o conversion/minctoecat/minctoecat.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/minctoecat/ecat_write.o conversion/minctoecat/ecat_write.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/minctoecat/machine_indep.o conversion/minctoecat/machine_indep.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o minctoecat conversion/minctoecat/minctoecat.o conversion/minctoecat/ecat_write.o conversion/minctoecat/machine_indep.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minctoecat conversion/minctoecat/minctoecat.o conversion/minctoecat/ecat_write.o conversion/minctoecat/machine_indep.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/nifti1/mnc2nii.o conversion/nifti1/mnc2nii.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/nifti1/nifti1_io.o conversion/nifti1/nifti1_io.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/nifti1/znzlib.o conversion/nifti1/znzlib.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mnc2nii conversion/nifti1/mnc2nii.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mnc2nii conversion/nifti1/mnc2nii.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/nifti1/nii2mnc.o conversion/nifti1/nii2mnc.c conversion/nifti1/nii2mnc.c: In function 'main': conversion/nifti1/nii2mnc.c:220:18: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o nii2mnc conversion/nifti1/nii2mnc.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/nii2mnc conversion/nifti1/nii2mnc.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/micropet/upet2mnc.o conversion/micropet/upet2mnc.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o upet2mnc conversion/micropet/upet2mnc.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/upet2mnc conversion/micropet/upet2mnc.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/dcm2mnc/dcm2mnc.o conversion/dcm2mnc/dcm2mnc.c conversion/dcm2mnc/dcm2mnc.c: In function 'is_cdexport_file': conversion/dcm2mnc/dcm2mnc.c:922:14: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] conversion/dcm2mnc/dcm2mnc.c: In function 'is_ima_file': conversion/dcm2mnc/dcm2mnc.c:945:14: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] conversion/dcm2mnc/dcm2mnc.c: In function 'use_the_files': conversion/dcm2mnc/dcm2mnc.c:884:23: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/dcm2mnc/dicom_to_minc.o conversion/dcm2mnc/dicom_to_minc.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/dcm2mnc/siemens_to_dicom.o conversion/dcm2mnc/siemens_to_dicom.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/dcm2mnc/dicom_read.o conversion/dcm2mnc/dicom_read.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/dcm2mnc/minc_file.o conversion/dcm2mnc/minc_file.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/dcm2mnc/progress.o conversion/dcm2mnc/progress.c gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/dcm2mnc/string_to_filename.o conversion/dcm2mnc/string_to_filename.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o dcm2mnc conversion/dcm2mnc/dcm2mnc.o conversion/dcm2mnc/dicom_to_minc.o conversion/dcm2mnc/siemens_to_dicom.o conversion/dcm2mnc/dicom_read.o conversion/dcm2mnc/minc_file.o conversion/dcm2mnc/progress.o conversion/dcm2mnc/string_to_filename.o libacr_nema.la libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/dcm2mnc conversion/dcm2mnc/dcm2mnc.o conversion/dcm2mnc/dicom_to_minc.o conversion/dcm2mnc/siemens_to_dicom.o conversion/dcm2mnc/dicom_read.o conversion/dcm2mnc/minc_file.o conversion/dcm2mnc/progress.o conversion/dcm2mnc/string_to_filename.o ./.libs/libacr_nema.so ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/vff2mnc/vff2mnc.o conversion/vff2mnc/vff2mnc.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o vff2mnc conversion/vff2mnc/vff2mnc.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/vff2mnc conversion/vff2mnc/vff2mnc.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/acr_test.o conversion/Acr_nema/acr_test.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o acr_test conversion/Acr_nema/acr_test.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/acr_test conversion/Acr_nema/acr_test.o ./.libs/libacr_nema.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/dump_acr_nema.o conversion/Acr_nema/dump_acr_nema.c conversion/Acr_nema/dump_acr_nema.c: In function 'main': conversion/Acr_nema/dump_acr_nema.c:218:33: warning: assignment from incompatible pointer type [enabled by default] /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o dump_acr_nema conversion/Acr_nema/dump_acr_nema.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/dump_acr_nema conversion/Acr_nema/dump_acr_nema.o ./.libs/libacr_nema.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/extract_acr_nema.o conversion/Acr_nema/extract_acr_nema.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o extract_acr_nema conversion/Acr_nema/extract_acr_nema.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/extract_acr_nema conversion/Acr_nema/extract_acr_nema.o ./.libs/libacr_nema.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/read_acr_nema.o conversion/Acr_nema/read_acr_nema.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o read_acr_nema conversion/Acr_nema/read_acr_nema.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/read_acr_nema conversion/Acr_nema/read_acr_nema.o ./.libs/libacr_nema.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/dicom_test.o conversion/Acr_nema/dicom_test.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o dicom_test conversion/Acr_nema/dicom_test.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/dicom_test conversion/Acr_nema/dicom_test.o ./.libs/libacr_nema.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/copy_acr_nema.o conversion/Acr_nema/copy_acr_nema.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o copy_acr_nema conversion/Acr_nema/copy_acr_nema.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/copy_acr_nema conversion/Acr_nema/copy_acr_nema.o ./.libs/libacr_nema.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/image_filters/byte_swap.o conversion/image_filters/byte_swap.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o byte_swap conversion/image_filters/byte_swap.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/byte_swap conversion/image_filters/byte_swap.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/image_filters/extract.o conversion/image_filters/extract.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o extract conversion/image_filters/extract.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/extract conversion/image_filters/extract.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincexample/mincexample1.o progs/mincexample/mincexample1.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincexample1 progs/mincexample/mincexample1.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincexample1 progs/mincexample/mincexample1.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincexample/mincexample2.o progs/mincexample/mincexample2.c /bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincexample2 progs/mincexample/mincexample2.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincexample2 progs/mincexample/mincexample2.o ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm /usr/bin/pod2man --section=1 progs/minccomplete/minccomplete > progs/minccomplete/minccomplete.man1 /usr/bin/pod2man --section=1 progs/minchistory/minchistory > progs/minchistory/minchistory.man1 make[3]: Leaving directory `/«PKGBUILDDIR»' Making all in volume_io make[3]: Entering directory `/«PKGBUILDDIR»/volume_io' Making all in Documentation make[4]: Entering directory `/«PKGBUILDDIR»/volume_io/Documentation' make[4]: Nothing to be done for `all'. make[4]: Leaving directory `/«PKGBUILDDIR»/volume_io/Documentation' Making all in Testing make[4]: Entering directory `/«PKGBUILDDIR»/volume_io/Testing' gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc -I../../volume_io/Include -I../../volume_io/Include -I../../progs/Proglib -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c example_modify.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o example_modify example_modify.o ../../libvolume_io2.la ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/example_modify example_modify.o ../../.libs/libvolume_io2.so ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc -I../../volume_io/Include -I../../volume_io/Include -I../../progs/Proglib -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c example_tags.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o example_tags example_tags.o ../../libvolume_io2.la ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/example_tags example_tags.o ../../.libs/libvolume_io2.so ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc -I../../volume_io/Include -I../../volume_io/Include -I../../progs/Proglib -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c example_volume_io.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o example_volume_io example_volume_io.o ../../libvolume_io2.la ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/example_volume_io example_volume_io.o ../../.libs/libvolume_io2.so ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm make[4]: Leaving directory `/«PKGBUILDDIR»/volume_io/Testing' make[4]: Entering directory `/«PKGBUILDDIR»/volume_io' make[4]: Nothing to be done for `all-am'. make[4]: Leaving directory `/«PKGBUILDDIR»/volume_io' make[3]: Leaving directory `/«PKGBUILDDIR»/volume_io' Making all in testdir make[3]: Entering directory `/«PKGBUILDDIR»/testdir' cd . && chmod +x run_test_arg_parse.sh run_tests.sh run_test2.sh xfmconcat_01.sh xfmconcat_02.sh run_test_progs.sh make[3]: Leaving directory `/«PKGBUILDDIR»/testdir' Making all in doc make[3]: Entering directory `/«PKGBUILDDIR»/doc' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/«PKGBUILDDIR»/doc' Making all in libsrc2/test make[3]: Entering directory `/«PKGBUILDDIR»/libsrc2/test' cd . && chmod +x testminctools.sh make[3]: Leaving directory `/«PKGBUILDDIR»/libsrc2/test' make[2]: Leaving directory `/«PKGBUILDDIR»' make[1]: Leaving directory `/«PKGBUILDDIR»' dh_auto_test -a -O--parallel make[1]: Entering directory `/«PKGBUILDDIR»' Making check in . make[2]: Entering directory `/«PKGBUILDDIR»' make[2]: Nothing to be done for `check-am'. make[2]: Leaving directory `/«PKGBUILDDIR»' Making check in volume_io make[2]: Entering directory `/«PKGBUILDDIR»/volume_io' Making check in Documentation make[3]: Entering directory `/«PKGBUILDDIR»/volume_io/Documentation' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/«PKGBUILDDIR»/volume_io/Documentation' Making check in Testing make[3]: Entering directory `/«PKGBUILDDIR»/volume_io/Testing' make test-xfm make[4]: Entering directory `/«PKGBUILDDIR»/volume_io/Testing' gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc -I../../volume_io/Include -I../../volume_io/Include -I../../progs/Proglib -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c test-xfm.c /bin/bash ../../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o test-xfm test-xfm.o ../../libvolume_io2.la ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/test-xfm test-xfm.o ../../.libs/libvolume_io2.so ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm make[4]: Leaving directory `/«PKGBUILDDIR»/volume_io/Testing' make check-TESTS make[4]: Entering directory `/«PKGBUILDDIR»/volume_io/Testing' Setting tolerance to 0.900000. PASS: check_xfm.sh ============= 1 test passed ============= make[4]: Leaving directory `/«PKGBUILDDIR»/volume_io/Testing' make[3]: Leaving directory `/«PKGBUILDDIR»/volume_io/Testing' make[3]: Entering directory `/«PKGBUILDDIR»/volume_io' make[3]: Nothing to be done for `check-am'. make[3]: Leaving directory `/«PKGBUILDDIR»/volume_io' make[2]: Leaving directory `/«PKGBUILDDIR»/volume_io' Making check in testdir make[2]: Entering directory `/«PKGBUILDDIR»/testdir' cd . && chmod +x run_test_arg_parse.sh run_tests.sh run_test2.sh xfmconcat_01.sh xfmconcat_02.sh run_test_progs.sh make minc test_mconv minc_types icv icv_range icv_dim test_speed icv_dim1 icv_fillvalue test_xfm create_grid_xfm mincapi test_speed test_arg_parse make[3]: Entering directory `/«PKGBUILDDIR»/testdir' gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c minc.c /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o minc minc.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minc minc.o ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c test_mconv.c /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o test_mconv test_mconv.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/test_mconv test_mconv.o ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c minc_types.c /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o minc_types minc_types.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minc_types minc_types.o ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c icv.c /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o icv icv.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/icv icv.o ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c icv_range.c icv_range.c: In function 'main': icv_range.c:61:26: warning: too many arguments for format [-Wformat-extra-args] /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o icv_range icv_range.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/icv_range icv_range.o ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c icv_dim.c /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o icv_dim icv_dim.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/icv_dim icv_dim.o ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c test_speed.c /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o test_speed test_speed.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/test_speed test_speed.o ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c icv_dim1.c /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o icv_dim1 icv_dim1.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/icv_dim1 icv_dim1.o ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c icv_fillvalue.c /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o icv_fillvalue icv_fillvalue.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/icv_fillvalue icv_fillvalue.o ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c test_xfm.c /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o test_xfm test_xfm.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/test_xfm test_xfm.o ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c create_grid_xfm.c /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o create_grid_xfm create_grid_xfm.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/create_grid_xfm create_grid_xfm.o ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c mincapi.c /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o mincapi mincapi.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincapi mincapi.o ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm make[3]: `test_speed' is up to date. gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c test_arg_parse.c /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o test_arg_parse test_arg_parse.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/test_arg_parse test_arg_parse.o ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm make[3]: Leaving directory `/«PKGBUILDDIR»/testdir' make check-TESTS make[3]: Entering directory `/«PKGBUILDDIR»/testdir' PASS: run_test_arg_parse.sh Testing minc_types Testing icv_range Testing icv Testing icv_dim Testing icv_dim1 Testing icv_fillvalue PASS: run_tests.sh Testing minc_types Testing icv_range Testing icv Testing icv_dim Testing icv_dim1 Testing icv_fillvalue PASS: run_test2.sh PASS: xfmconcat_01.sh PASS: xfmconcat_02.sh **** Tests completed with no errors PASS: mincapi PASS: run_test_progs.sh ================== All 7 tests passed ================== make[3]: Leaving directory `/«PKGBUILDDIR»/testdir' make[2]: Leaving directory `/«PKGBUILDDIR»/testdir' Making check in doc make[2]: Entering directory `/«PKGBUILDDIR»/doc' make[2]: Nothing to be done for `check'. make[2]: Leaving directory `/«PKGBUILDDIR»/doc' Making check in libsrc2/test make[2]: Entering directory `/«PKGBUILDDIR»/libsrc2/test' cd . && chmod +x testminctools.sh make create-test-images create-test-images-2 datatype-test dimension-test full-test grpattr-test hyper-test hyper-test-2 label-test record-test slice-test valid-test volprops-test multires-test convert-test vector_dimension-test make[3]: Entering directory `/«PKGBUILDDIR»/libsrc2/test' gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c create-test-images.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o create-test-images create-test-images.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/create-test-images create-test-images.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c create-test-images-2.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o create-test-images-2 create-test-images-2.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/create-test-images-2 create-test-images-2.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c datatype-test.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o datatype-test datatype-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/datatype-test datatype-test.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c dimension-test.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o dimension-test dimension-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/dimension-test dimension-test.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c full-test.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o full-test full-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/full-test full-test.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c grpattr-test.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o grpattr-test grpattr-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/grpattr-test grpattr-test.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c hyper-test.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o hyper-test hyper-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/hyper-test hyper-test.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c hyper-test-2.c hyper-test-2.c: In function 'main': hyper-test-2.c:153:5: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat] hyper-test-2.c:153:5: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat] hyper-test-2.c:153:5: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long unsigned int' [-Wformat] hyper-test-2.c:154:5: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat] hyper-test-2.c:154:5: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat] hyper-test-2.c:154:5: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long unsigned int' [-Wformat] hyper-test-2.c:164:5: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat] hyper-test-2.c:164:5: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat] hyper-test-2.c:164:5: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long unsigned int' [-Wformat] hyper-test-2.c:178:5: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat] hyper-test-2.c:178:5: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat] hyper-test-2.c:178:5: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long unsigned int' [-Wformat] /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o hyper-test-2 hyper-test-2.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/hyper-test-2 hyper-test-2.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c label-test.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o label-test label-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/label-test label-test.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c record-test.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o record-test record-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/record-test record-test.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c slice-test.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o slice-test slice-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/slice-test slice-test.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c valid-test.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o valid-test valid-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/valid-test valid-test.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volprops-test.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o volprops-test volprops-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/volprops-test volprops-test.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c multires-test.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o multires-test multires-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/multires-test multires-test.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c convert-test.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o convert-test convert-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/convert-test convert-test.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2 -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c vector_dimension-test.c /bin/bash ../../libtool --tag=CC --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z,relro -o vector_dimension-test vector_dimension-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/vector_dimension-test vector_dimension-test.o ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm make[3]: Leaving directory `/«PKGBUILDDIR»/libsrc2/test' make check-TESTS make[3]: Entering directory `/«PKGBUILDDIR»/libsrc2/test' No errors Creating 2D image with IRREGULAR sample dimension!! (2D_image.mnc) Creating 3D image with slice scaling!! (3D_image.mnc) Creating 4D image with slice scaling!! (4D_image.mnc) PASS: create-test-images No errors Creating 3D image REAL stored as INT w/ slice scaling!! (real_as_int_image.mnc) Creating 3D image REAL stored as FLOAT w/ slice scaling!! (real_as_float_image.mnc) PASS: create-test-images-2 PASS: datatype-test No errors PASS: dimension-test No errors PASS: full-test No errors ***************** PASS: grpattr-test miget_real_value_hyperslab() miget_voxel_value_hyperslab, default dimensions miget_voxel_value_hyperslab(), swapped dimensions miget_voxel_hyperslab, reversed Z axis Read 3x2x2 matrices of voxel values: miget_hyperslab_normalized() read and write entire hyperslab: Read and verify hyperslab in original dimension order: No errors PASS: hyper-test No errors Creating image with slice scaling!! Opening hyperslab-test2.mnc! Sizes: 210, 245, 142 Getting a real value hyperslab Starting at 4, 3, 5 Extending to 120, 180, 110 Test arbitrary location 70, 100, 104 Test from hyperslab: 9.519348 Test from voxel scaled: 9.519348 Test voxel value itself: 634.000000 HMMMMMMMMMM! let's try something else Test arbitrary location 104, 100, 70 Test from hyperslab: 6.105524 Test from voxel scaled: 6.105524 Test voxel value itself: 181.000000 PASS: hyper-test-2 No errors Creating label image !! 0 6 Number of defined labels 6 Print label file with file order x,y,z 0 ffffff 808080 ff0000 ff00 ff 0 ffffff 808080 ff0000 ff00 ff 0 ffffff 808080 ff0000 ff00 ff 0 ffffff 808080 ff0000 ff00 ff Print label file with apparent order z,y,x 0 808080 ff00 808080 ff00 0 ff00 0 808080 0 808080 ff00 ffffff ff0000 ff ff0000 ff ffffff ff ffffff ff0000 ffffff ff0000 ff PASS: label-test No errors PASS: record-test PASS: slice-test PASS: valid-test No errors Multiresolution enabled: 1 depth: 2 Set compression type to 0 Got compression type 0 Set zlib level to 4 Got zlib level 4 PASS: volprops-test No errors Creating volume... Writing data... Selecting half-size image Selecting quarter-size image Return to full resolution. Flush any remaining thumbnails. PASS: multires-test No errors PASS: convert-test No errors Opening vector-dimension file! Total number of dimensions : 4 Dimension Size in file order : 41 410 530 3 Dim class RECORD present check dim name for *vector_dimension* Let's get the first 10 data values of each vector component (file order) FILE ORDER --> zspace, yspace, xspace, vector_dimension Vector Componenet 1 0 3 6 9 12 15 18 21 24 27 Vector Componenet 2 1 4 7 10 13 16 19 22 25 28 Vector Componenet 3 2 5 8 11 14 17 20 23 26 29 APPARENT ORDER --> vector_dimension, zspace, yspace, xspace APPARENT ORDER SET Vector Componenet 1 0 3 6 9 12 15 18 21 24 27 Vector Componenet 2 1 4 7 10 13 16 19 22 25 28 Vector Componenet 3 2 5 8 11 14 17 20 23 26 29 PASS: vector_dimension-test Converted file to MINC2.0 format. Version: 2 (HDF5) file: t3_grid_0_2.mnc image: signed__ short -32766 to 32766 image dimensions: vector_dimension zspace yspace xspace dimension name length step start -------------- ------ ---- ----- vector_dimension 3 unknown unknown zspace 1 1 55 yspace 256 1 -145.5 xspace 224 1 -111.5 About to loop, max_buffer is 4194304 Processing:...Done Statistics on image About to loop, max_buffer is 4194304 Mean: 1.29318327 Stddev: 3.477269548 Adding const 2 to all three channels. About to loop, max_buffer is 4194304 Processing:...Done Statistics on image with added constant About to loop, max_buffer is 4194304 Mean: 3.29318327 Stddev: 3.477269548 Resampling file with t1.xfm transform Transforming slices:...Done Transformed file file: t32_transformed.mnc image: signed__ short -32766 to 32766 image dimensions: vector_dimension zspace yspace xspace dimension name length step start -------------- ------ ---- ----- vector_dimension 3 unknown unknown zspace 1 1 85 yspace 256 1 -125.5 xspace 224 1 -101.5 PASS: testminctools.sh =================== All 17 tests passed =================== make[3]: Leaving directory `/«PKGBUILDDIR»/libsrc2/test' make[2]: Leaving directory `/«PKGBUILDDIR»/libsrc2/test' make[1]: Leaving directory `/«PKGBUILDDIR»' fakeroot debian/rules binary-arch dh binary-arch --parallel --with autotools_dev dh_testroot -a -O--parallel dh_prep -a -O--parallel dh_installdirs -a -O--parallel dh_auto_install -a -O--parallel make[1]: Entering directory `/«PKGBUILDDIR»' Making install in . make[2]: Entering directory `/«PKGBUILDDIR»' make[3]: Entering directory `/«PKGBUILDDIR»' test -z "/usr/lib/arm-linux-gnueabihf" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf" /bin/bash ./libtool --mode=install /usr/bin/install -c libminc2.la libvolume_io2.la libacr_nema.la '/«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/libminc2.so.1.1.3 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc2.so.1.1.3 libtool: install: (cd /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libminc2.so.1.1.3 libminc2.so.1 || { rm -f libminc2.so.1 && ln -s libminc2.so.1.1.3 libminc2.so.1; }; }) libtool: install: (cd /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libminc2.so.1.1.3 libminc2.so || { rm -f libminc2.so && ln -s libminc2.so.1.1.3 libminc2.so; }; }) libtool: install: /usr/bin/install -c .libs/libminc2.lai /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc2.la libtool: install: /usr/bin/install -c .libs/libvolume_io2.so.1.1.2 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 libtool: install: (cd /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libvolume_io2.so.1.1.2 libvolume_io2.so.1 || { rm -f libvolume_io2.so.1 && ln -s libvolume_io2.so.1.1.2 libvolume_io2.so.1; }; }) libtool: install: (cd /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libvolume_io2.so.1.1.2 libvolume_io2.so || { rm -f libvolume_io2.so && ln -s libvolume_io2.so.1.1.2 libvolume_io2.so; }; }) libtool: install: /usr/bin/install -c .libs/libvolume_io2.lai /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libvolume_io2.la libtool: install: /usr/bin/install -c .libs/libacr_nema.so.0.0.0 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libacr_nema.so.0.0.0 libtool: install: (cd /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libacr_nema.so.0.0.0 libacr_nema.so.0 || { rm -f libacr_nema.so.0 && ln -s libacr_nema.so.0.0.0 libacr_nema.so.0; }; }) libtool: install: (cd /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libacr_nema.so.0.0.0 libacr_nema.so || { rm -f libacr_nema.so && ln -s libacr_nema.so.0.0.0 libacr_nema.so; }; }) libtool: install: /usr/bin/install -c .libs/libacr_nema.lai /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libacr_nema.la libtool: install: /usr/bin/install -c .libs/libminc2.a /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc2.a libtool: install: chmod 644 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc2.a libtool: install: ranlib /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc2.a libtool: install: /usr/bin/install -c .libs/libvolume_io2.a /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libvolume_io2.a libtool: install: chmod 644 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libvolume_io2.a libtool: install: ranlib /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libvolume_io2.a libtool: install: /usr/bin/install -c .libs/libacr_nema.a /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libacr_nema.a libtool: install: chmod 644 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libacr_nema.a libtool: install: ranlib /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libacr_nema.a libtool: install: warning: remember to run `libtool --finish /usr/lib/arm-linux-gnueabihf' test -z "/usr/bin" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/bin" /bin/bash ./libtool --mode=install /usr/bin/install -c voxeltoworld worldtovoxel minc_modify_header mincaverage minccalc minccmp mincconcat minccopy mincexpand mincextract mincgen mincinfo minclookup mincmakescalar mincmakevector mincmath mincresample mincreshape mincstats minctoraw invert_raw_image mincwindow rawtominc transformtags xfm2def xfmconcat xfminvert mincconvert mincdump ecattominc minctoecat mnc2nii nii2mnc upet2mnc dcm2mnc vff2mnc acr_test dump_acr_nema extract_acr_nema read_acr_nema dicom_test copy_acr_nema byte_swap extract '/«PKGBUILDDIR»/debian/tmp/usr/bin' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/voxeltoworld /«PKGBUILDDIR»/debian/tmp/usr/bin/voxeltoworld libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/worldtovoxel /«PKGBUILDDIR»/debian/tmp/usr/bin/worldtovoxel libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/minc_modify_header /«PKGBUILDDIR»/debian/tmp/usr/bin/minc_modify_header libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincaverage /«PKGBUILDDIR»/debian/tmp/usr/bin/mincaverage libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/minccalc /«PKGBUILDDIR»/debian/tmp/usr/bin/minccalc libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/minccmp /«PKGBUILDDIR»/debian/tmp/usr/bin/minccmp libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincconcat /«PKGBUILDDIR»/debian/tmp/usr/bin/mincconcat libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/minccopy /«PKGBUILDDIR»/debian/tmp/usr/bin/minccopy libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincexpand /«PKGBUILDDIR»/debian/tmp/usr/bin/mincexpand libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincextract /«PKGBUILDDIR»/debian/tmp/usr/bin/mincextract libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincgen /«PKGBUILDDIR»/debian/tmp/usr/bin/mincgen libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincinfo /«PKGBUILDDIR»/debian/tmp/usr/bin/mincinfo libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/minclookup /«PKGBUILDDIR»/debian/tmp/usr/bin/minclookup libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincmakescalar /«PKGBUILDDIR»/debian/tmp/usr/bin/mincmakescalar libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincmakevector /«PKGBUILDDIR»/debian/tmp/usr/bin/mincmakevector libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincmath /«PKGBUILDDIR»/debian/tmp/usr/bin/mincmath libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincresample /«PKGBUILDDIR»/debian/tmp/usr/bin/mincresample libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincreshape /«PKGBUILDDIR»/debian/tmp/usr/bin/mincreshape libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincstats /«PKGBUILDDIR»/debian/tmp/usr/bin/mincstats libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/minctoraw /«PKGBUILDDIR»/debian/tmp/usr/bin/minctoraw libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/invert_raw_image /«PKGBUILDDIR»/debian/tmp/usr/bin/invert_raw_image libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincwindow /«PKGBUILDDIR»/debian/tmp/usr/bin/mincwindow libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/rawtominc /«PKGBUILDDIR»/debian/tmp/usr/bin/rawtominc libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/transformtags /«PKGBUILDDIR»/debian/tmp/usr/bin/transformtags libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/xfm2def /«PKGBUILDDIR»/debian/tmp/usr/bin/xfm2def libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/xfmconcat /«PKGBUILDDIR»/debian/tmp/usr/bin/xfmconcat libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/xfminvert /«PKGBUILDDIR»/debian/tmp/usr/bin/xfminvert libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincconvert /«PKGBUILDDIR»/debian/tmp/usr/bin/mincconvert libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mincdump /«PKGBUILDDIR»/debian/tmp/usr/bin/mincdump libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/ecattominc /«PKGBUILDDIR»/debian/tmp/usr/bin/ecattominc libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/minctoecat /«PKGBUILDDIR»/debian/tmp/usr/bin/minctoecat libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/mnc2nii /«PKGBUILDDIR»/debian/tmp/usr/bin/mnc2nii libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/nii2mnc /«PKGBUILDDIR»/debian/tmp/usr/bin/nii2mnc libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/upet2mnc /«PKGBUILDDIR»/debian/tmp/usr/bin/upet2mnc libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/dcm2mnc /«PKGBUILDDIR»/debian/tmp/usr/bin/dcm2mnc libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/vff2mnc /«PKGBUILDDIR»/debian/tmp/usr/bin/vff2mnc libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/acr_test /«PKGBUILDDIR»/debian/tmp/usr/bin/acr_test libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/dump_acr_nema /«PKGBUILDDIR»/debian/tmp/usr/bin/dump_acr_nema libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/extract_acr_nema /«PKGBUILDDIR»/debian/tmp/usr/bin/extract_acr_nema libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/read_acr_nema /«PKGBUILDDIR»/debian/tmp/usr/bin/read_acr_nema libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/dicom_test /«PKGBUILDDIR»/debian/tmp/usr/bin/dicom_test libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/copy_acr_nema /«PKGBUILDDIR»/debian/tmp/usr/bin/copy_acr_nema libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/byte_swap /«PKGBUILDDIR»/debian/tmp/usr/bin/byte_swap libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/extract /«PKGBUILDDIR»/debian/tmp/usr/bin/extract test -z "/usr/bin" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/bin" /usr/bin/install -c progs/minccomplete/minccomplete progs/minchistory/minchistory progs/xfm/xfmflip '/«PKGBUILDDIR»/debian/tmp/usr/bin' test -z "/usr/bin" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/bin" /usr/bin/install -c progs/mincdiff/mincdiff progs/mincedit/mincedit progs/mincheader/mincheader progs/mincpik/mincpik progs/mincview/mincview '/«PKGBUILDDIR»/debian/tmp/usr/bin' test -z "/usr/include" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/include" /usr/bin/install -c -m 644 libsrc/minc.h libsrc/ParseArgv.h libsrc/voxel_loop.h libsrc/nd_loop.h libsrc/time_stamp.h libsrc/minc_compat.h volume_io/Include/volume_io.h libsrc2/minc2.h libsrc/minc_simple.h conversion/Acr_nema/acr_nema.h '/«PKGBUILDDIR»/debian/tmp/usr/include' test -z "/usr/include/acr_nema" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/include/acr_nema" /usr/bin/install -c -m 644 conversion/Acr_nema/acr_nema/acr_io.h conversion/Acr_nema/acr_nema/dicom_client_routines.h conversion/Acr_nema/acr_nema/dicom_network.h conversion/Acr_nema/acr_nema/element.h conversion/Acr_nema/acr_nema/file_io.h conversion/Acr_nema/acr_nema/group.h conversion/Acr_nema/acr_nema/message.h conversion/Acr_nema/acr_nema/value_repr.h '/«PKGBUILDDIR»/debian/tmp/usr/include/acr_nema' test -z "/usr/include/volume_io" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/include/volume_io" /usr/bin/install -c -m 644 volume_io/Include/volume_io/alloc.h volume_io/Include/volume_io/arrays.h volume_io/Include/volume_io/basic.h volume_io/Include/volume_io/def_math.h volume_io/Include/volume_io/files.h volume_io/Include/volume_io/geom_structs.h volume_io/Include/volume_io/geometry.h volume_io/Include/internal_volume_io.h volume_io/Include/volume_io/multidim.h volume_io/Include/volume_io/progress.h volume_io/Include/volume_io/string_funcs.h volume_io/Include/volume_io/system_dependent.h volume_io/Include/volume_io/transforms.h volume_io/Include/volume_io/vol_io_prototypes.h volume_io/Include/volume_io/volume.h volume_io/Include/volume_io/volume_cache.h '/«PKGBUILDDIR»/debian/tmp/usr/include/volume_io' test -z "/usr/share/man/man1" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1" /usr/bin/install -c -m 644 'progs/coordinates/voxeltoworld.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/voxeltoworld.1' /usr/bin/install -c -m 644 'progs/minc_modify_header/minc_modify_header.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minc_modify_header.1' /usr/bin/install -c -m 644 'progs/mincaverage/mincaverage.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincaverage.1' /usr/bin/install -c -m 644 'progs/minccalc/minccalc.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minccalc.1' /usr/bin/install -c -m 644 'progs/minccomplete/minccomplete.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minccomplete.1' /usr/bin/install -c -m 644 'progs/mincconcat/mincconcat.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincconcat.1' /usr/bin/install -c -m 644 'progs/minccmp/minccmp.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minccmp.1' /usr/bin/install -c -m 644 'progs/minccopy/minccopy.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minccopy.1' /usr/bin/install -c -m 644 'progs/mincdiff/mincdiff.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincdiff.1' /usr/bin/install -c -m 644 'progs/mincedit/mincedit.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincedit.1' /usr/bin/install -c -m 644 'progs/mincexpand/mincexpand.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincexpand.1' /usr/bin/install -c -m 644 'progs/mincextract/mincextract.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincextract.1' /usr/bin/install -c -m 644 'progs/mincgen/mincgen.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincgen.1' /usr/bin/install -c -m 644 'progs/mincheader/mincheader.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincheader.1' /usr/bin/install -c -m 644 'progs/minchistory/minchistory.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minchistory.1' /usr/bin/install -c -m 644 'progs/mincinfo/mincinfo.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincinfo.1' /usr/bin/install -c -m 644 'progs/minclookup/minclookup.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minclookup.1' /usr/bin/install -c -m 644 'progs/mincmakescalar/mincmakescalar.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincmakescalar.1' /usr/bin/install -c -m 644 'progs/mincmakevector/mincmakevector.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincmakevector.1' /usr/bin/install -c -m 644 'progs/mincmath/mincmath.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincmath.1' /usr/bin/install -c -m 644 'progs/mincpik/mincpik.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincpik.1' /usr/bin/install -c -m 644 'progs/mincresample/mincresample.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincresample.1' /usr/bin/install -c -m 644 'progs/mincreshape/mincreshape.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincreshape.1' /usr/bin/install -c -m 644 'progs/mincstats/mincstats.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincstats.1' /usr/bin/install -c -m 644 'progs/minctoraw/minctoraw.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minctoraw.1' /usr/bin/install -c -m 644 'progs/mincview/invert_raw_image.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/invert_raw_image.1' /usr/bin/install -c -m 644 'progs/mincview/mincview.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincview.1' /usr/bin/install -c -m 644 'progs/mincwindow/mincwindow.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincwindow.1' /usr/bin/install -c -m 644 'progs/rawtominc/rawtominc.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/rawtominc.1' /usr/bin/install -c -m 644 'progs/xfm/transformtags.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/transformtags.1' /usr/bin/install -c -m 644 'progs/xfm/xfm2def.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/xfm2def.1' /usr/bin/install -c -m 644 'progs/xfm/xfmconcat.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/xfmconcat.1' /usr/bin/install -c -m 644 'progs/xfm/xfminvert.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/xfminvert.1' /usr/bin/install -c -m 644 'progs/xfm/xfmflip.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/xfmflip.1' /usr/bin/install -c -m 644 'progs/mincconvert/mincconvert.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincconvert.1' /usr/bin/install -c -m 644 'conversion/ecattominc/ecattominc.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/ecattominc.1' /usr/bin/install -c -m 644 'conversion/minctoecat/minctoecat.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minctoecat.1' /usr/bin/install -c -m 644 'conversion/nifti1/nii2mnc.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/nii2mnc.1' /usr/bin/install -c -m 644 'conversion/nifti1/mnc2nii.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mnc2nii.1' /usr/bin/install -c -m 644 'conversion/micropet/upet2mnc.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/upet2mnc.1' /usr/bin/install -c -m 644 'conversion/dcm2mnc/dcm2mnc.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/dcm2mnc.1' /usr/bin/install -c -m 644 'conversion/vff2mnc/vff2mnc.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/vff2mnc.1' test -z "/usr/share/man/man3" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/share/man/man3" /usr/bin/install -c -m 644 'libsrc/ParseArgv.man3' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man3/ParseArgv.3' make[3]: Leaving directory `/«PKGBUILDDIR»' make[2]: Leaving directory `/«PKGBUILDDIR»' Making install in volume_io make[2]: Entering directory `/«PKGBUILDDIR»/volume_io' Making install in Documentation make[3]: Entering directory `/«PKGBUILDDIR»/volume_io/Documentation' make[4]: Entering directory `/«PKGBUILDDIR»/volume_io/Documentation' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/«PKGBUILDDIR»/volume_io/Documentation' make[3]: Leaving directory `/«PKGBUILDDIR»/volume_io/Documentation' Making install in Testing make[3]: Entering directory `/«PKGBUILDDIR»/volume_io/Testing' make[4]: Entering directory `/«PKGBUILDDIR»/volume_io/Testing' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/«PKGBUILDDIR»/volume_io/Testing' make[3]: Leaving directory `/«PKGBUILDDIR»/volume_io/Testing' make[3]: Entering directory `/«PKGBUILDDIR»/volume_io' make[4]: Entering directory `/«PKGBUILDDIR»/volume_io' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/«PKGBUILDDIR»/volume_io' make[3]: Leaving directory `/«PKGBUILDDIR»/volume_io' make[2]: Leaving directory `/«PKGBUILDDIR»/volume_io' Making install in testdir make[2]: Entering directory `/«PKGBUILDDIR»/testdir' cd . && chmod +x run_test_arg_parse.sh run_tests.sh run_test2.sh xfmconcat_01.sh xfmconcat_02.sh run_test_progs.sh make[3]: Entering directory `/«PKGBUILDDIR»/testdir' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/«PKGBUILDDIR»/testdir' make[2]: Leaving directory `/«PKGBUILDDIR»/testdir' Making install in doc make[2]: Entering directory `/«PKGBUILDDIR»/doc' make[3]: Entering directory `/«PKGBUILDDIR»/doc' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/«PKGBUILDDIR»/doc' make[2]: Leaving directory `/«PKGBUILDDIR»/doc' Making install in libsrc2/test make[2]: Entering directory `/«PKGBUILDDIR»/libsrc2/test' cd . && chmod +x testminctools.sh make[3]: Entering directory `/«PKGBUILDDIR»/libsrc2/test' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/«PKGBUILDDIR»/libsrc2/test' make[2]: Leaving directory `/«PKGBUILDDIR»/libsrc2/test' make[1]: Leaving directory `/«PKGBUILDDIR»' debian/rules override_dh_install make[1]: Entering directory `/«PKGBUILDDIR»' /usr/bin/make -C doc docs make[2]: Entering directory `/«PKGBUILDDIR»/doc' latex prog_ref.tex This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (./prog_ref.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) No file prog_ref.aux. No file prog_ref.toc. [1] [2] [3] [4] [5] [6] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd ) [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] (./prog_ref.aux) ) Output written on prog_ref.dvi (18 pages, 57980 bytes). Transcript written on prog_ref.log. latex prog_ref.tex This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (./prog_ref.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (./prog_ref.aux) (./prog_ref.toc) [1] [2] [3] [4] [5] [6] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] (./prog_ref.aux) ) Output written on prog_ref.dvi (18 pages, 64764 bytes). Transcript written on prog_ref.log. dvips prog_ref.dvi -o prog_ref.ps This is dvips(k) 5.991 Copyright 2011 Radical Eye Software (www.radicaleye.com) ' TeX output 2012.05.22:0501' -> prog_ref.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] latex prog_guide.tex This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (./prog_guide.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) No file prog_guide.aux. No file prog_guide.toc. [1] [2] [3] [4] [5] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [6] [7] [8] [9] [10] [11] [12] (./prog_guide.aux) ) Output written on prog_guide.dvi (12 pages, 42568 bytes). Transcript written on prog_guide.log. latex prog_guide.tex This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (./prog_guide.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (./prog_guide.aux) (./prog_guide.toc) [1] [2] [3] [4] [5] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [6] [7] [8] [9] [10] [11] [12] (./prog_guide.aux) ) Output written on prog_guide.dvi (12 pages, 50236 bytes). Transcript written on prog_guide.log. dvips prog_guide.dvi -o prog_guide.ps This is dvips(k) 5.991 Copyright 2011 Radical Eye Software (www.radicaleye.com) ' TeX output 2012.05.22:0501' -> prog_guide.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] make[2]: Leaving directory `/«PKGBUILDDIR»/doc' /usr/bin/make -C volume_io/Documentation docs make[2]: Entering directory `/«PKGBUILDDIR»/volume_io/Documentation' latex volume_io.tex This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (./volume_io.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. (/usr/share/texlive/texmf-dist/tex/latex/base/latex209.def Entering LaTeX 2.09 COMPATIBILITY MODE ************************************************************* !!WARNING!! !!WARNING!! !!WARNING!! !!WARNING!! This mode attempts to provide an emulation of the LaTeX 2.09 author environment so that OLD documents can be successfully processed. It should NOT be used for NEW documents! New documents should use Standard LaTeX conventions and start with the \documentclass command. Compatibility mode is UNLIKELY TO WORK with LaTeX 2.09 style files that change any internal macros, especially not with those that change the FONT SELECTION or OUTPUT ROUTINES. Therefore such style files MUST BE UPDATED to use Current Standard LaTeX: LaTeX2e. If you suspect that you may be using such a style file, which is probably very, very old by now, then you should attempt to get it updated by sending a copy of this error message to the author of that file. ************************************************************* (/usr/share/texlive/texmf-dist/tex/latex/base/tracefnt.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/latexsym.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document Class: report 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) No file volume_io.aux. (/usr/share/texlive/texmf-dist/tex/latex/base/ulasy.fd) [0] No file volume_io.toc. [1] Chapter 1. [2] Chapter 2. [3] Chapter 3. [4] [5] Chapter 4. [6] [7] [8] [9] Chapter 5. [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] Chapter 6. [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] Chapter 7. [51] [52] [53] [54] [55] [56] Chapter 8. [57] [58] [59] [60] [61] [62] [63] Chapter 9. [64] [65] [66] (./volume_io.aux) ) Output written on volume_io.dvi (67 pages, 138128 bytes). Transcript written on volume_io.log. latex volume_io.tex This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian) restricted \write18 enabled. entering extended mode (./volume_io.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. (/usr/share/texlive/texmf-dist/tex/latex/base/latex209.def Entering LaTeX 2.09 COMPATIBILITY MODE ************************************************************* !!WARNING!! !!WARNING!! !!WARNING!! !!WARNING!! This mode attempts to provide an emulation of the LaTeX 2.09 author environment so that OLD documents can be successfully processed. It should NOT be used for NEW documents! New documents should use Standard LaTeX conventions and start with the \documentclass command. Compatibility mode is UNLIKELY TO WORK with LaTeX 2.09 style files that change any internal macros, especially not with those that change the FONT SELECTION or OUTPUT ROUTINES. Therefore such style files MUST BE UPDATED to use Current Standard LaTeX: LaTeX2e. If you suspect that you may be using such a style file, which is probably very, very old by now, then you should attempt to get it updated by sending a copy of this error message to the author of that file. ************************************************************* (/usr/share/texlive/texmf-dist/tex/latex/base/tracefnt.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/latexsym.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document Class: report 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (./volume_io.aux) (/usr/share/texlive/texmf-dist/tex/latex/base/ulasy.fd) [0] (./volume_io.toc [1]) [2] Chapter 1. [3] Chapter 2. [4] Chapter 3. [5] [6] Chapter 4. [7] [8] [9] [10] Chapter 5. [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] Chapter 6. [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] Chapter 7. [52] [53] [54] [55] [56] [57] Chapter 8. [58] [59] [60] [61] [62] [63] [64] Chapter 9. [65] [66] [67] (./volume_io.aux) ) Output written on volume_io.dvi (68 pages, 146956 bytes). Transcript written on volume_io.log. dvips volume_io.dvi -o volume_io.ps This is dvips(k) 5.991 Copyright 2011 Radical Eye Software (www.radicaleye.com) ' TeX output 2012.05.22:0501' -> volume_io.ps . [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] [63] [64] [65] [66] [67] make[2]: Leaving directory `/«PKGBUILDDIR»/volume_io/Documentation' # minc-tools rm -f debian/tmp/usr/bin/byte_swap rm -f debian/tmp/usr/bin/extract rm -f debian/tmp/usr/bin/acr_test rm -f debian/tmp/usr/bin/dicom_test dh_install -pminc-tools --autodest debian/tmp/usr/bin dh_install -pminc-tools --autodest debian/tmp/usr/share/man dh_link -pminc-tools \ /usr/share/man/man1/voxeltoworld.1 \ /usr/share/man/man1/worldtovoxel.1 # libminc2-1 dh_install -plibminc2-1 --autodest debian/tmp/usr/lib/*/lib*.so.* # libminc-dev dh_install -plibminc-dev --autodest debian/tmp/usr/lib/*/lib*.so dh_install -plibminc-dev --autodest debian/tmp/usr/lib/*/lib*.a dh_install -plibminc-dev --autodest debian/tmp/usr/include dh_installdocs -plibminc-dev doc/prog_ref.ps doc/prog_guide.ps volume_io/Documentation/volume_io.ps debian/index.html make[1]: Leaving directory `/«PKGBUILDDIR»' dh_installdocs -a -O--parallel dh_installchangelogs -a -O--parallel dh_installexamples -a -O--parallel dh_installman -a -O--parallel dh_installcatalogs -a -O--parallel dh_installcron -a -O--parallel dh_installdebconf -a -O--parallel dh_installemacsen -a -O--parallel dh_installifupdown -a -O--parallel dh_installinfo -a -O--parallel dh_installinit -a -O--parallel dh_installmenu -a -O--parallel dh_installmime -a -O--parallel dh_installmodules -a -O--parallel dh_installlogcheck -a -O--parallel dh_installlogrotate -a -O--parallel dh_installpam -a -O--parallel dh_installppp -a -O--parallel dh_installudev -a -O--parallel dh_installwm -a -O--parallel dh_installxfonts -a -O--parallel dh_installgsettings -a -O--parallel dh_bugfiles -a -O--parallel dh_ucf -a -O--parallel dh_lintian -a -O--parallel dh_gconf -a -O--parallel dh_icons -a -O--parallel dh_perl -a -O--parallel dh_usrlocal -a -O--parallel dh_link -a -O--parallel dh_compress -a -O--parallel dh_fixperms -a -O--parallel dh_strip -a -O--parallel dh_makeshlibs -a -O--parallel dh_shlibdeps -a -O--parallel dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/minc-tools/usr/bin/mincstats debian/minc-tools/usr/bin/nii2mnc debian/minc-tools/usr/bin/invert_raw_image debian/minc-tools/usr/bin/mincmakescalar debian/minc-tools/usr/bin/mincexpand debian/minc-tools/usr/bin/dump_acr_nema debian/minc-tools/usr/bin/upet2mnc debian/minc-tools/usr/bin/minccopy debian/minc-tools/usr/bin/xfminvert debian/minc-tools/usr/bin/read_acr_nema debian/minc-tools/usr/bin/mincconvert debian/minc-tools/usr/bin/minctoraw debian/minc-tools/usr/bin/xfm2def debian/minc-tools/usr/bin/mincreshape debian/minc-tools/usr/bin/mincresample debian/minc-tools/usr/bin/minccmp debian/minc-tools/usr/bin/minccalc debian/minc-tools/usr/bin/mincinfo debian/minc-tools/usr/bin/copy_acr_nema debian/minc-tools/usr/bin/vff2mnc debian/minc-tools/usr/bin/mincdump debian/minc-tools/usr/bin/mincmakevector debian/minc-tools/usr/bin/minctoecat debian/minc-tools/usr/bin/mincconcat debian/minc-tools/usr/bin/mincaverage debian/minc-tools/usr/bin/minc_modify_header debian/minc-tools/usr/bin/ecattominc debian/minc-tools/usr/bin/mincextract debian/minc-tools/usr/bin/voxeltoworld debian/minc-tools/usr/bin/mnc2nii debian/minc-tools/usr/bin/mincwindow debian/minc-tools/usr/bin/worldtovoxel debian/minc-tools/usr/bin/dcm2mnc debian/minc-tools/usr/bin/mincmath debian/minc-tools/usr/bin/mincgen debian/minc-tools/usr/bin/xfmconcat debian/minc-tools/usr/bin/rawtominc debian/minc-tools/usr/bin/transformtags debian/minc-tools/usr/bin/extract_acr_nema debian/minc-tools/usr/bin/minclookup were not linked against libz.so.1 (they use none of the library's symbols). dpkg-shlibdeps: warning: symbol miicv_setdbl used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries. dpkg-shlibdeps: warning: symbol miattputstr used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries. dpkg-shlibdeps: warning: symbol miicv_detach used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries. dpkg-shlibdeps: warning: symbol micopy_all_var_defs used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries. dpkg-shlibdeps: warning: symbol miget_valid_range used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries. dpkg-shlibdeps: warning: symbol miicv_put used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries. dpkg-shlibdeps: warning: symbol miopen used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries. dpkg-shlibdeps: warning: symbol MI2attput used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries. dpkg-shlibdeps: warning: symbol MI2diminq used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries. dpkg-shlibdeps: warning: symbol miicv_create used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries. dpkg-shlibdeps: warning: 26 other similar warnings have been skipped (use -v to see them all). dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libacr_nema.so.0.0.0 debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libminc2.so.1.1.3 were not linked against libz.so.1 (they use none of the library's symbols). dh_installdeb -a -O--parallel dh_gencontrol -a -O--parallel dpkg-gencontrol: warning: package minc-tools: unused substitution variable ${perl:Depends} dh_md5sums -a -O--parallel dh_builddeb -a -O--parallel dpkg-deb: building package `minc-tools' in `../minc-tools_2.1.10-1_armhf.deb'. dpkg-deb: building package `libminc2-1:armhf' in `../libminc2-1_2.1.10-1_armhf.deb'. dpkg-deb: building package `libminc-dev' in `../libminc-dev_2.1.10-1_armhf.deb'. dpkg-genchanges -B -mbuildd >../minc_2.1.10-1_armhf.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build minc-2.1.10 dpkg-buildpackage: binary only upload (no source included) ──────────────────────────────────────────────────────────────────────────────── Build finished at 20120521-2203 Finished ──────── I: Built successfully ┌──────────────────────────────────────────────────────────────────────────────┐ │ Changes │ └──────────────────────────────────────────────────────────────────────────────┘ minc_2.1.10-1_armhf.changes: ──────────────────────────── Format: 1.8 Date: Sun, 26 Feb 2012 01:37:47 -0600 Source: minc Binary: minc-tools libminc2-1 libminc-dev Architecture: armhf Version: 2.1.10-1 Distribution: testing Urgency: low Maintainer: buildd Changed-By: Steve M. Robbins Description: libminc-dev - MNI medical image format development environment libminc2-1 - MNI medical image format library minc-tools - MNI medical image format tools Changes: minc (2.1.10-1) unstable; urgency=low . * New upstream. . * patches/03_mincview.diff: Remove. Script mincview rewritten to use Imagemagick . * patches/decompress-whole-file.diff: * patches/read_file_names-refactor.patch: Remove. Applied upstream. * rules: Remove use of dh_autoreconf. . * patches/hdfv2-fixes.patch: New. Ensure using HDF5 v2 API. . * control: Remove dependency and build-dependency on csh. Checksums-Sha1: b3a360533cc991e107ea9560759c3f8b2c53b967 506678 minc-tools_2.1.10-1_armhf.deb 3f025fdb6631f0f7aade956922e8b6715ad4e8c5 236418 libminc2-1_2.1.10-1_armhf.deb 3d5e8b9d4ab4fea09f47fbebef194a87c1bb4c18 846202 libminc-dev_2.1.10-1_armhf.deb Checksums-Sha256: 5d7235c656b9d205c070c8675a9b2589256f85209af34a06516e0c41bf19a77c 506678 minc-tools_2.1.10-1_armhf.deb 90ea42b01601aa0743b378b42cb3bbf2a98871e6923ad762fb6de5ed664da5cb 236418 libminc2-1_2.1.10-1_armhf.deb 056f70c6b515469660b82c9e55b57bf128408abb14cf4519c5f002d35138588a 846202 libminc-dev_2.1.10-1_armhf.deb Files: 3badcbd2d6274ef171e8937723fdbba9 506678 science optional minc-tools_2.1.10-1_armhf.deb 9b453968710c5cfdc221802aee25d15f 236418 libs optional libminc2-1_2.1.10-1_armhf.deb a6ef0fcd425019d5346e7badf8a2db23 846202 libdevel optional libminc-dev_2.1.10-1_armhf.deb ┌──────────────────────────────────────────────────────────────────────────────┐ │ Package contents │ └──────────────────────────────────────────────────────────────────────────────┘ minc-tools_2.1.10-1_armhf.deb ───────────────────────────── new debian package, version 2.0. size 506678 bytes: control archive= 3386 bytes. 1100 bytes, 22 lines control 5721 bytes, 94 lines md5sums Package: minc-tools Source: minc Version: 2.1.10-1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 1088 Depends: libc6 (>= 2.13-28), libhdf5-7, libminc2-1, libnetcdfc7, zlib1g (>= 1:1.1.4), netcdf-bin, libgetopt-tabular-perl, libtext-format-perl, imagemagick Section: science Priority: optional Homepage: http://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage Description: MNI medical image format tools This package contains tools to manipulate MINC files. . The Minc file format is a highly flexible medical image file format built on top of the NetCDF generalized data format. The format is simple, self-describing, extensible, portable and N-dimensional, with programming interfaces for both low-level data access and high-level volume manipulation. On top of the libraries is a suite of generic image-file manipulation tools. 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root/root 3289 2012-05-21 22:01 ./usr/bin/mincview -rwxr-xr-x root/root 14920 2012-05-21 22:01 ./usr/bin/mincinfo -rwxr-xr-x root/root 100432 2012-05-21 22:01 ./usr/bin/nii2mnc -rwxr-xr-x root/root 5736 2012-05-21 22:01 ./usr/bin/mincconvert -rwxr-xr-x root/root 100380 2012-05-21 22:01 ./usr/bin/mnc2nii -rwxr-xr-x root/root 5608 2012-05-21 22:01 ./usr/bin/worldtovoxel -rwxr-xr-x root/root 3604 2012-05-21 22:01 ./usr/bin/xfmflip -rwxr-xr-x root/root 47804 2012-05-21 22:01 ./usr/bin/minccalc lrwxrwxrwx root/root 0 2012-05-21 22:01 ./usr/share/man/man1/worldtovoxel.1.gz -> voxeltoworld.1.gz libminc2-1_2.1.10-1_armhf.deb ───────────────────────────── new debian package, version 2.0. size 236418 bytes: control archive= 1262 bytes. 1223 bytes, 26 lines control 468 bytes, 6 lines md5sums 135 bytes, 7 lines * postinst #!/bin/sh 132 bytes, 7 lines * postrm #!/bin/sh 74 bytes, 3 lines shlibs Package: libminc2-1 Source: minc Version: 2.1.10-1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 490 Pre-Depends: multiarch-support Depends: libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libhdf5-7, libnetcdfc7, zlib1g (>= 1:1.1.4) Section: libs Priority: optional Multi-Arch: same Homepage: http://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage Description: MNI medical image format library This package contains the libraries libminc2 and libvolume_io2. . The Minc file format is a highly flexible medical image file format. Minc version 1 is built on top of the NetCDF generalized data format. Minc version 2 is built on top of the HDF data format. This library handles both formats. In each case the format is simple, self-describing, extensible, portable and N-dimensional, with programming interfaces for both low-level data access and high-level volume manipulation. On top of the libraries is a suite of generic image-file manipulation tools. The format, libraries and tools are designed for use in a medical-imaging research environment : they are simple and powerful and make no attempt to provide a pretty interface to users. drwxr-xr-x root/root 0 2012-05-21 22:01 ./ drwxr-xr-x root/root 0 2012-05-21 22:01 ./usr/ drwxr-xr-x root/root 0 2012-05-21 22:01 ./usr/share/ drwxr-xr-x root/root 0 2012-05-21 22:01 ./usr/share/doc/ drwxr-xr-x root/root 0 2012-05-21 22:01 ./usr/share/doc/libminc2-1/ -rw-r--r-- root/root 3552 2012-02-25 23:44 ./usr/share/doc/libminc2-1/changelog.Debian.gz -rw-r--r-- root/root 848 2008-06-17 21:03 ./usr/share/doc/libminc2-1/copyright -rw-r--r-- root/root 11740 2012-02-21 07:08 ./usr/share/doc/libminc2-1/changelog.gz drwxr-xr-x root/root 0 2012-05-21 22:01 ./usr/lib/ drwxr-xr-x root/root 0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 204092 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 -rw-r--r-- root/root 60580 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libacr_nema.so.0.0.0 -rw-r--r-- root/root 187528 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libminc2.so.1.1.3 lrwxrwxrwx root/root 0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libacr_nema.so.0 -> libacr_nema.so.0.0.0 lrwxrwxrwx root/root 0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1 -> libvolume_io2.so.1.1.2 lrwxrwxrwx root/root 0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libminc2.so.1 -> libminc2.so.1.1.3 libminc-dev_2.1.10-1_armhf.deb ────────────────────────────── new debian package, version 2.0. size 846202 bytes: control archive= 2198 bytes. 1225 bytes, 27 lines control 3021 bytes, 45 lines md5sums Package: libminc-dev Source: minc Version: 2.1.10-1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 1455 Depends: libminc2-1 (= 2.1.10-1), libnetcdf-dev, libhdf5-dev Conflicts: libminc0-dev Replaces: libminc0-dev Section: libdevel Priority: optional Homepage: http://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage Description: MNI medical image format development environment This package contains the library and headers for libminc2 and libvolume_io2. . The Minc file format is a highly flexible medical image file format. Minc version 1 is built on top of the NetCDF generalized data format. Minc version 2 is built on top of the HDF data format. This library handles both formats. In each case the format is simple, self-describing, extensible, portable and N-dimensional, with programming interfaces for both low-level data access and high-level volume manipulation. On top of the libraries is a suite of generic image-file manipulation tools. The format, libraries and tools are designed for use in a medical-imaging research environment : they are simple and powerful and make no attempt to provide a pretty interface to users. drwxr-xr-x root/root 0 2012-05-21 22:01 ./ drwxr-xr-x root/root 0 2012-05-21 22:01 ./usr/ drwxr-xr-x root/root 0 2012-05-21 22:01 ./usr/include/ -rw-r--r-- root/root 2150 2012-05-21 22:01 ./usr/include/volume_io.h -rw-r--r-- root/root 2972 2012-05-21 22:01 ./usr/include/minc_compat.h -rw-r--r-- root/root 2692 2012-05-21 22:01 ./usr/include/ParseArgv.h -rw-r--r-- root/root 24435 2012-05-21 22:01 ./usr/include/minc.h -rw-r--r-- root/root 2148 2012-05-21 22:01 ./usr/include/time_stamp.h -rw-r--r-- root/root 23057 2012-05-21 22:01 ./usr/include/minc2.h -rw-r--r-- root/root 3194 2012-05-21 22:01 ./usr/include/minc_simple.h -rw-r--r-- root/root 2942 2012-05-21 22:01 ./usr/include/nd_loop.h -rw-r--r-- root/root 3236 2012-05-21 22:01 ./usr/include/acr_nema.h -rw-r--r-- root/root 15000 2012-05-21 22:01 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root/root 0 2012-05-21 22:01 ./usr/lib/ drwxr-xr-x root/root 0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 284868 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libvolume_io2.a -rw-r--r-- root/root 249458 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libminc2.a -rw-r--r-- root/root 85390 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libacr_nema.a lrwxrwxrwx root/root 0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libminc2.so -> libminc2.so.1.1.3 lrwxrwxrwx root/root 0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libacr_nema.so -> libacr_nema.so.0.0.0 lrwxrwxrwx root/root 0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libvolume_io2.so -> libvolume_io2.so.1.1.2 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Post Build │ └──────────────────────────────────────────────────────────────────────────────┘ ┌──────────────────────────────────────────────────────────────────────────────┐ │ Cleanup │ └──────────────────────────────────────────────────────────────────────────────┘ Purging /«BUILDDIR» Reading package lists... Building dependency tree... Reading state information... 0 upgraded, 0 newly installed, 0 to remove and 16 not upgraded. Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: autoconf* automake* autotools-dev* bsdmainutils* debhelper* dh-autoreconf* ed* file* fontconfig-config* gettext* gettext-base* groff-base* hdf5-helpers* html2text* intltool-debian* libcf0* libcroco3* libcurl3-gnutls* libexpat1* libffi5* libfontconfig1* libfreetype6* libgcrypt11* libgfortran3* libglib2.0-0* libgnutls26* libgpg-error0* libgraphite3* libgssapi-krb5-2* libhdf5-7* libhdf5-dev* libice6* libidn11* libjpeg8* libjpeg8-dev* libk5crypto3* libkeyutils1* libkpathsea6* libkrb5-3* libkrb5support0* liblcms1* libldap-2.4-2* libmagic1* libnetcdf-dev* libnetcdfc++4* libnetcdfc7* libnetcdff5* libopenjpeg2* libp11-kit0* libpaper-utils* libpaper1* libpcre3* libpipeline1* libpng12-0* libpoppler13* libptexenc1* librtmp0* libsasl2-2* libsm6* libssh2-1* libtasn1-3* libtool* libunistring0* libx11-6* libx11-data* libxau6* libxaw7* libxcb1* libxdmcp6* libxext6* libxml2* libxmu6* libxpm4* libxt6* luatex* m4* man-db* mime-support* po-debconf* sbuild-build-depends-core-dummy* sbuild-build-depends-minc-dummy* tex-common* texlive-base* texlive-binaries* texlive-common* texlive-doc-base* texlive-latex-base* ttf-dejavu-core* x11-common* zlib1g-dev* 0 upgraded, 0 newly installed, 90 to remove and 16 not upgraded. After this operation, 172 MB disk space will be freed. (Reading database ... 17339 files and directories currently installed.) Removing sbuild-build-depends-minc-dummy ... Removing dh-autoreconf ... Removing automake ... Removing autoconf ... Purging configuration files for autoconf ... Removing libtool ... Removing autotools-dev ... Removing debhelper ... Removing man-db ... Purging configuration files for man-db ... Removing bsdmainutils ... Purging configuration files for bsdmainutils ... Removing texlive-latex-base ... Purging configuration files for texlive-latex-base ... Removing texlive-base ... Purging configuration files for texlive-base ... Removing texlive-binaries ... Removing ed ... Removing file ... Removing luatex ... Removing libpoppler13 ... Purging configuration files for libpoppler13 ... Removing libfontconfig1:armhf ... Purging configuration files for libfontconfig1:armhf ... Removing fontconfig-config ... Purging configuration files for fontconfig-config ... Removing po-debconf ... Removing intltool-debian ... Removing gettext ... Removing gettext-base ... Removing groff-base ... Purging configuration files for groff-base ... Removing libhdf5-dev ... Removing hdf5-helpers ... Removing html2text ... Purging configuration files for html2text ... Removing libnetcdf-dev ... Removing libcf0 ... Purging configuration files for libcf0 ... Removing libcroco3:armhf ... Purging configuration files for libcroco3:armhf ... Removing libnetcdff5 ... Purging configuration files for libnetcdff5 ... Removing libnetcdfc++4 ... Purging configuration files for libnetcdfc++4 ... Removing libnetcdfc7 ... Purging configuration files for libnetcdfc7 ... Removing libcurl3-gnutls:armhf ... Purging configuration files for libcurl3-gnutls:armhf ... Removing libexpat1:armhf ... Purging configuration files for libexpat1:armhf ... Removing libglib2.0-0:armhf ... Purging configuration files for libglib2.0-0:armhf ... Removing libffi5:armhf ... Purging configuration files for libffi5:armhf ... Removing libfreetype6:armhf ... Purging configuration files for libfreetype6:armhf ... Removing libssh2-1:armhf ... Purging configuration files for libssh2-1:armhf ... Removing librtmp0:armhf ... Purging configuration files for librtmp0:armhf ... Removing libldap-2.4-2:armhf ... Purging configuration files for libldap-2.4-2:armhf ... Removing libgnutls26:armhf ... Purging configuration files for libgnutls26:armhf ... Removing libgcrypt11:armhf ... Purging configuration files for libgcrypt11:armhf ... Removing libhdf5-7 ... Purging configuration files for libhdf5-7 ... Removing libgfortran3:armhf ... Purging configuration files for libgfortran3:armhf ... Removing libgpg-error0:armhf ... Purging configuration files for libgpg-error0:armhf ... Removing libgraphite3 ... Purging configuration files for libgraphite3 ... Removing libgssapi-krb5-2:armhf ... Purging configuration files for libgssapi-krb5-2:armhf ... Removing libxaw7:armhf ... Purging configuration files for libxaw7:armhf ... Removing libxmu6:armhf ... Purging configuration files for libxmu6:armhf ... Removing libxt6:armhf ... Purging configuration files for libxt6:armhf ... Removing libsm6:armhf ... Purging configuration files for libsm6:armhf ... Removing libice6:armhf ... Purging configuration files for libice6:armhf ... Removing libidn11:armhf ... Purging configuration files for libidn11:armhf ... Removing libjpeg8-dev:armhf ... Removing libjpeg8:armhf ... Removing libkrb5-3:armhf ... Purging configuration files for libkrb5-3:armhf ... Removing libk5crypto3:armhf ... Purging configuration files for libk5crypto3:armhf ... Removing libkeyutils1:armhf ... Purging configuration files for libkeyutils1:armhf ... Removing libptexenc1 ... Purging configuration files for libptexenc1 ... Removing libkpathsea6 ... Purging configuration files for libkpathsea6 ... Removing libkrb5support0:armhf ... Purging configuration files for libkrb5support0:armhf ... Removing liblcms1 ... Purging configuration files for liblcms1 ... Removing libmagic1:armhf ... Purging configuration files for libmagic1:armhf ... Removing libopenjpeg2 ... Purging configuration files for libopenjpeg2 ... Removing libp11-kit0:armhf ... Purging configuration files for libp11-kit0:armhf ... Removing libpaper-utils ... Removing libpaper1:armhf ... Purging configuration files for libpaper1:armhf ... Removing libpcre3:armhf ... Purging configuration files for libpcre3:armhf ... Removing libpipeline1:armhf ... Purging configuration files for libpipeline1:armhf ... Removing libpng12-0:armhf ... Purging configuration files for libpng12-0:armhf ... Removing libsasl2-2:armhf ... Purging configuration files for libsasl2-2:armhf ... Removing libtasn1-3:armhf ... Purging configuration files for libtasn1-3:armhf ... Removing libunistring0:armhf ... Purging configuration files for libunistring0:armhf ... Removing libxpm4:armhf ... Purging configuration files for libxpm4:armhf ... Removing libxext6:armhf ... Purging configuration files for libxext6:armhf ... Removing libx11-6:armhf ... Purging configuration files for libx11-6:armhf ... Removing libx11-data ... Removing libxcb1:armhf ... Purging configuration files for libxcb1:armhf ... Removing libxau6:armhf ... Purging configuration files for libxau6:armhf ... Removing libxdmcp6:armhf ... Purging configuration files for libxdmcp6:armhf ... Removing libxml2:armhf ... Purging configuration files for libxml2:armhf ... Removing m4 ... Removing mime-support ... Purging configuration files for mime-support ... Removing sbuild-build-depends-core-dummy ... Removing texlive-doc-base ... Purging configuration files for texlive-doc-base ... Removing texlive-common ... Removing tex-common ... Purging configuration files for tex-common ... Removing ttf-dejavu-core ... Removing x11-common ... All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of stop. Purging configuration files for x11-common ... Removing zlib1g-dev:armhf ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Summary │ └──────────────────────────────────────────────────────────────────────────────┘ Architecture: armhf Build-Space: 115888 Build-Time: 1097 Distribution: testing Install-Time: 222 Job: minc_2.1.10-1 Package: minc Package-Time: 1339 Source-Version: 2.1.10-1 Space: 115888 Status: successful Version: 2.1.10-1 ──────────────────────────────────────────────────────────────────────────────── Finished at 20120521-2203 Build needed 00:22:19, 115888k disc space