sbuild (Debian sbuild) 0.62.6 (07 Dec 2011) on build04.raspbian.lan ╔══════════════════════════════════════════════════════════════════════════════╗ ║ silo-llnl 4.8-13 (armhf) 25 Jun 2012 03:42 ║ ╚══════════════════════════════════════════════════════════════════════════════╝ Package: silo-llnl Version: 4.8-13 Source Version: 4.8-13 Distribution: testing Architecture: armhf I: NOTICE: Log filtering will replace 'build/silo-llnl-pFdIXd/silo-llnl-4.8' with '«PKGBUILDDIR»' I: NOTICE: Log filtering will replace 'build/silo-llnl-pFdIXd' with '«BUILDDIR»' I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/testing-armhf-sbuild-7cb0c04c-f30a-4eec-9e41-e2558839b22e' with '«CHROOT»' ┌──────────────────────────────────────────────────────────────────────────────┐ │ Update chroot │ └──────────────────────────────────────────────────────────────────────────────┘ Hit http://repo.raspbian.lan testing InRelease Hit http://repo.raspbian.lan testing/main Sources Hit http://repo.raspbian.lan testing/main armhf Packages Ign http://repo.raspbian.lan testing/main Translation-en Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Fetch source files │ └──────────────────────────────────────────────────────────────────────────────┘ Check APT ───────── Checking available source versions... Download source files with APT ────────────────────────────── Reading package lists... Building dependency tree... Reading state information... Need to get 11.9 MB of source archives. Get:1 http://repo.raspbian.lan/raspbian/ testing/main silo-llnl 4.8-13 (dsc) [2116 B] Get:2 http://repo.raspbian.lan/raspbian/ testing/main silo-llnl 4.8-13 (tar) [11.9 MB] Get:3 http://repo.raspbian.lan/raspbian/ testing/main silo-llnl 4.8-13 (diff) [12.0 kB] Fetched 11.9 MB in 3s (3574 kB/s) Download complete and in download only mode Check arch ────────── Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-qvkrPE/apt_archive/sbuild-build-depends-core-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install core build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy debconf: delaying package configuration, since apt-utils is not installed 0 upgraded, 1 newly installed, 0 to remove and 13 not upgraded. Need to get 0 B/704 B of archives. After this operation, 0 B of additional disk space will be used. Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 10654 files and directories currently installed.) Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8.1.3~), libreadline-dev, libhdf5-mpi-dev | libhdf5-dev, zlib1g-dev, libqt4-dev (<< 4:4.9~), gfortran, python-dev, chrpath, python-all-dev, mpi-default-dev, autoconf-archive, autoconf, automake, libtool, dh-autoreconf (>= 4~) Merged Build-Conflicts: qt3-dev-tools Filtered Build-Depends: libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8.1.3~), libreadline-dev, libhdf5-mpi-dev, zlib1g-dev, libqt4-dev (<< 4:4.9~), gfortran, python-dev, chrpath, python-all-dev, mpi-default-dev, autoconf-archive, autoconf, automake, libtool, dh-autoreconf (>= 4~) Filtered Build-Conflicts: qt3-dev-tools dpkg-deb: building package `sbuild-build-depends-silo-llnl-dummy' in `/«BUILDDIR»/resolver-1lvVGI/apt_archive/sbuild-build-depends-silo-llnl-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install silo-llnl build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: adduser autoconf autoconf-archive automake autotools-dev bsdmainutils chrpath debhelper dh-autoreconf file fontconfig fontconfig-config gettext gettext-base gfortran gfortran-4.6 groff-base hdf5-helpers html2text intltool-debian libasprintf0c2 libaudio2 libcroco3 libdb4.8 libdbus-1-3 libexpat1 libexpat1-dev libffi5 libfontconfig1 libfreetype6 libgettextpo0 libgfortran3 libglib2.0-0 libhdf5-mpi-dev libhdf5-openmpi-7 libhdf5-openmpi-dev libibverbs-dev libibverbs1 libice6 libjbig0 libjpeg8 libjpeg8-dev liblcms1 libmagic1 libmng1 libopenmpi-dev libopenmpi1.3 libpcre3 libpipeline1 libpng12-0 libpython2.6 libpython2.7 libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtgui4 libreadline-dev libreadline6-dev libsm6 libsqlite3-0 libssl-dev libssl1.0.0 libtiff4 libtinfo-dev libtool libtorque2 libunistring0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxrender1 libxt6 m4 man-db mime-support mpi-default-dev openmpi-common po-debconf python python-all python-all-dev python-dev python-minimal python2.6 python2.6-dev python2.6-minimal python2.7 python2.7-dev python2.7-minimal qdbus qt4-linguist-tools qt4-qmake ttf-dejavu-core x11-common zlib1g-dev Suggested packages: autoconf2.13 gnu-standards autoconf-doc wamerican wordlist whois vacation dh-make gettext-doc gfortran-doc gfortran-4.6-doc libgfortran3-dbg groff nas libhdf5-doc liblcms-utils libqt4-declarative-folderlistmodel libqt4-declarative-gestures libqt4-declarative-particles libqt4-declarative-shaders qt4-qmlviewer firebird-dev libmysqlclient-dev libpq-dev libsqlite0-dev libsqlite3-dev qt4-dev-tools qt4-doc unixodbc-dev libthai0 qt4-qtconfig libtool-doc automaken gcj less www-browser libmail-box-perl python-doc python-tk python2.6-doc binfmt-support python2.7-doc Recommended packages: autopoint curl wget lynx-cur dbus libglib2.0-data shared-mime-info libqt4-opengl-dev libqtwebkit-dev libqt4-sql-mysql libqt4-sql-odbc libqt4-sql-psql libqt4-sql-sqlite libqt4-sql-sqlite2 libcups2 libssl-doc libltdl-dev xml-core libmail-sendmail-perl The following NEW packages will be installed: adduser autoconf autoconf-archive automake autotools-dev bsdmainutils chrpath debhelper dh-autoreconf file fontconfig fontconfig-config gettext gettext-base gfortran gfortran-4.6 groff-base hdf5-helpers html2text intltool-debian libasprintf0c2 libaudio2 libcroco3 libdb4.8 libdbus-1-3 libexpat1 libexpat1-dev libffi5 libfontconfig1 libfreetype6 libgettextpo0 libgfortran3 libglib2.0-0 libhdf5-mpi-dev libhdf5-openmpi-7 libhdf5-openmpi-dev libibverbs-dev libibverbs1 libice6 libjbig0 libjpeg8 libjpeg8-dev liblcms1 libmagic1 libmng1 libopenmpi-dev libopenmpi1.3 libpcre3 libpipeline1 libpng12-0 libpython2.6 libpython2.7 libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtgui4 libreadline-dev libreadline6-dev libsm6 libsqlite3-0 libssl-dev libssl1.0.0 libtiff4 libtinfo-dev libtool libtorque2 libunistring0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxrender1 libxt6 m4 man-db mime-support mpi-default-dev openmpi-common po-debconf python python-all python-all-dev python-dev python-minimal python2.6 python2.6-dev python2.6-minimal python2.7 python2.7-dev python2.7-minimal qdbus qt4-linguist-tools qt4-qmake sbuild-build-depends-silo-llnl-dummy ttf-dejavu-core x11-common zlib1g-dev 0 upgraded, 113 newly installed, 0 to remove and 13 not upgraded. Need to get 4753 kB/104 MB of archives. After this operation, 257 MB of additional disk space will be used. Get:1 http://repo.raspbian.lan/raspbian/ testing/main autoconf-archive all 20111221-1 [834 kB] Get:2 http://repo.raspbian.lan/raspbian/ testing/main libhdf5-openmpi-7 armhf 1.8.8-9 [1445 kB] Get:3 http://repo.raspbian.lan/raspbian/ testing/main libhdf5-openmpi-dev armhf 1.8.8-9 [2451 kB] Get:4 http://repo.raspbian.lan/raspbian/ testing/main libhdf5-mpi-dev armhf 1.8.8-9 [24.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 4753 kB in 1s (3434 kB/s) Selecting previously unselected package libpcre3:armhf. (Reading database ... 10654 files and directories currently installed.) Unpacking libpcre3:armhf (from .../libpcre3_1%3a8.30-5_armhf.deb) ... Selecting previously unselected package libpipeline1:armhf. Unpacking libpipeline1:armhf (from .../libpipeline1_1.2.1-1_armhf.deb) ... Selecting previously unselected package libssl1.0.0:armhf. 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Selecting previously unselected package python2.6-dev. Unpacking python2.6-dev (from .../python2.6-dev_2.6.7-4_armhf.deb) ... Selecting previously unselected package python-all-dev. Unpacking python-all-dev (from .../python-all-dev_2.7.3~rc2-1_all.deb) ... Selecting previously unselected package libibverbs1. Unpacking libibverbs1 (from .../libibverbs1_1.1.6-1_armhf.deb) ... Selecting previously unselected package libopenmpi1.3. Unpacking libopenmpi1.3 (from .../libopenmpi1.3_1.4.5-1_armhf.deb) ... Selecting previously unselected package libhdf5-openmpi-7. Unpacking libhdf5-openmpi-7 (from .../libhdf5-openmpi-7_1.8.8-9_armhf.deb) ... Selecting previously unselected package openmpi-common. Unpacking openmpi-common (from .../openmpi-common_1.4.5-1_all.deb) ... Selecting previously unselected package libibverbs-dev. Unpacking libibverbs-dev (from .../libibverbs-dev_1.1.6-1_armhf.deb) ... Selecting previously unselected package libopenmpi-dev. Unpacking libopenmpi-dev (from .../libopenmpi-dev_1.4.5-1_armhf.deb) ... Selecting previously unselected package libhdf5-openmpi-dev. Unpacking libhdf5-openmpi-dev (from .../libhdf5-openmpi-dev_1.8.8-9_armhf.deb) ... Selecting previously unselected package mpi-default-dev. Unpacking mpi-default-dev (from .../mpi-default-dev_1.0.1_armhf.deb) ... Selecting previously unselected package libhdf5-mpi-dev. Unpacking libhdf5-mpi-dev (from .../libhdf5-mpi-dev_1.8.8-9_armhf.deb) ... Selecting previously unselected package sbuild-build-depends-silo-llnl-dummy. Unpacking sbuild-build-depends-silo-llnl-dummy (from .../sbuild-build-depends-silo-llnl-dummy.deb) ... Setting up libpcre3:armhf (1:8.30-5) ... Setting up libpipeline1:armhf (1.2.1-1) ... Setting up libssl1.0.0:armhf (1.0.1c-3+rpi1) ... Setting up libasprintf0c2:armhf (0.18.1.1-9) ... Setting up libmagic1:armhf (5.11-1) ... Setting up libsqlite3-0:armhf (3.7.13-1) ... Setting up libxml2:armhf (2.8.0+dfsg1-4) ... Setting up libxau6:armhf (1:1.0.7-1) ... Setting up x11-common (1:7.6+13) ... All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6:armhf (2:1.0.8-2) ... Setting up libsm6:armhf (2:1.2.1-2) ... Setting up libxdmcp6:armhf (1:1.1.1-1) ... Setting up libxcb1:armhf (1.8.1-1) ... Setting up libx11-data (2:1.5.0-1) ... Setting up libx11-6:armhf (2:1.5.0-1) ... Setting up libxt6:armhf (1:1.1.3-1) ... Setting up libaudio2:armhf (1.9.3-5) ... Setting up libffi5:armhf (3.0.10-3+b3) ... Setting up libglib2.0-0:armhf (2.32.3-1) ... No schema files found: doing nothing. Setting up libcroco3:armhf (0.6.5-1) ... Setting up libdbus-1-3:armhf (1.6.0-1) ... Setting up libexpat1:armhf (2.1.0-1) ... Setting up libfreetype6:armhf (2.4.9-1) ... Setting up ttf-dejavu-core (2.33-2) ... Setting up fontconfig-config (2.9.0-6) ... Setting up libfontconfig1:armhf (2.9.0-6) ... Setting up libunistring0:armhf (0.9.3-5) ... Setting up libgettextpo0:armhf (0.18.1.1-9) ... Setting up libgfortran3:armhf (4.7.0-1.1+rpi) ... Setting up libjpeg8:armhf (8d-1) ... Setting up liblcms1:armhf (1.19.dfsg-1.1) ... Setting up libmng1:armhf (1.0.10-3) ... Setting up libpng12-0:armhf (1.2.49-1) ... Setting up libqtcore4:armhf (4:4.8.1-1+rpi1) ... Setting up libqt4-xml:armhf (4:4.8.1-1+rpi1) ... Setting up libqt4-sql:armhf (4:4.8.1-1+rpi1) ... Setting up fontconfig (2.9.0-6) ... Cleaning up old fontconfig caches... done. Regenerating fonts cache... done. Setting up libjbig0:armhf (2.0-2) ... Setting up libtiff4:armhf (3.9.6-5) ... Setting up libxext6:armhf (2:1.3.1-2) ... Setting up libxrender1:armhf (1:0.9.7-1) ... Setting up libqtgui4:armhf (4:4.8.1-1+rpi1) ... Setting up libqt4-svg:armhf (4:4.8.1-1+rpi1) ... Setting up libqt4-test:armhf (4:4.8.1-1+rpi1) ... Setting up libdb4.8:armhf (4.8.30-11) ... Setting up adduser (3.113+nmu3) ... Setting up bsdmainutils (9.0.3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up groff-base (1.21-7) ... Setting up man-db (2.6.1-2) ... Building database of manual pages ... Setting up file (5.11-1) ... Setting up gettext-base (0.18.1.1-9) ... Setting up m4 (1.4.16-3) ... Setting up mime-support (3.52-1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode. Setting up python2.7-minimal (2.7.3~rc2-2.1) ... Setting up python2.7 (2.7.3~rc2-2.1) ... Setting up python-minimal (2.7.3~rc2-1) ... Setting up python (2.7.3~rc2-1) ... Setting up python2.6-minimal (2.6.7-4) ... Setting up python2.6 (2.6.7-4) ... Setting up autoconf (2.69-1) ... Setting up autoconf-archive (20111221-1) ... Setting up autotools-dev (20120608.1) ... Setting up automake (1:1.11.5-2) ... update-alternatives: using /usr/bin/automake-1.11 to provide /usr/bin/automake (automake) in auto mode. Setting up chrpath (0.13-2) ... Setting up html2text (1.3.2a-15) ... Setting up gettext (0.18.1.1-9) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2) ... Setting up debhelper (9.20120608) ... Setting up libtool (2.4.2-1+b2) ... Setting up dh-autoreconf (6) ... Setting up gfortran-4.6 (4.6.3-1.1+rpi2) ... Setting up gfortran (4:4.6.2-4) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode. Setting up hdf5-helpers (1.8.8-9) ... Setting up libexpat1-dev (2.1.0-1) ... Setting up libjpeg8-dev:armhf (8d-1) ... Setting up libpython2.6 (2.6.7-4) ... Setting up libpython2.7 (2.7.3~rc2-2.1) ... Setting up qt4-linguist-tools (4:4.8.1-1+rpi1) ... update-alternatives: using /usr/bin/lupdate-qt4 to provide /usr/bin/lupdate (lupdate) in auto mode. update-alternatives: using /usr/bin/lrelease-qt4 to provide /usr/bin/lrelease (lrelease) in auto mode. Setting up qt4-qmake (4:4.8.1-1+rpi1) ... update-alternatives: using /usr/bin/qmake-qt4 to provide /usr/bin/qmake (qmake) in auto mode. Setting up libtinfo-dev:armhf (5.9-9) ... Setting up libreadline6-dev:armhf (6.2-8) ... Setting up libreadline-dev:armhf (6.2-8) ... Setting up zlib1g-dev:armhf (1:1.2.7.dfsg-13) ... Setting up libssl-dev (1.0.1c-3+rpi1) ... Setting up libtorque2 (2.4.16+dfsg-1) ... Setting up python-all (2.7.3~rc2-1) ... Setting up python2.7-dev (2.7.3~rc2-2.1) ... Setting up python-dev (2.7.3~rc2-1) ... Setting up python2.6-dev (2.6.7-4) ... Setting up python-all-dev (2.7.3~rc2-1) ... Setting up libibverbs1 (1.1.6-1) ... Setting up libopenmpi1.3 (1.4.5-1) ... Setting up libhdf5-openmpi-7 (1.8.8-9) ... Setting up openmpi-common (1.4.5-1) ... Setting up libibverbs-dev (1.1.6-1) ... Setting up libopenmpi-dev (1.4.5-1) ... update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode. Setting up libhdf5-openmpi-dev (1.8.8-9) ... Setting up mpi-default-dev (1.0.1) ... Setting up libhdf5-mpi-dev (1.8.8-9) ... Setting up qdbus (4:4.8.1-1+rpi1) ... Setting up libqt4-dbus:armhf (4:4.8.1-1+rpi1) ... Setting up libqt4-network:armhf (4:4.8.1-1+rpi1) ... Setting up libqt4-script:armhf (4:4.8.1-1+rpi1) ... Setting up libqt4-xmlpatterns:armhf (4:4.8.1-1+rpi1) ... Setting up libqt4-declarative:armhf (4:4.8.1-1+rpi1) ... Setting up libqt4-designer:armhf (4:4.8.1-1+rpi1) ... Setting up libqt4-help:armhf (4:4.8.1-1+rpi1) ... Setting up libqt4-qt3support:armhf (4:4.8.1-1+rpi1) ... Setting up libqt4-scripttools:armhf (4:4.8.1-1+rpi1) ... Setting up libqt4-dev-bin (4:4.8.1-1+rpi1) ... update-alternatives: using /usr/bin/moc-qt4 to provide /usr/bin/moc (moc) in auto mode. update-alternatives: using /usr/bin/uic-qt4 to provide /usr/bin/uic (uic) in auto mode. update-alternatives: warning: skip creation of /usr/share/man/man1/uic.1.gz because associated file /usr/share/man/man1/uic-qt4.1.gz (of link group uic) doesn't exist. Setting up libqt4-dev (4:4.8.1-1+rpi1) ... Setting up sbuild-build-depends-silo-llnl-dummy (0.invalid.0) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build environment │ └──────────────────────────────────────────────────────────────────────────────┘ Kernel: Linux 3.2.0-2-mx5 armhf (armv7l) Toolchain package versions: binutils_2.22-6.1 dpkg-dev_1.16.3 g++-4.6_4.6.3-1.1+rpi2 gcc-4.6_4.6.3-1.1+rpi2 libc6-dev_2.13-33 libstdc++6_4.7.0-1.1+rpi libstdc++6-4.6-dev_4.6.3-1.1+rpi2 linux-libc-dev_3.2.18-1 Package versions: adduser_3.113+nmu3 apt_0.9.3+rpi1 autoconf_2.69-1 autoconf-archive_20111221-1 automake_1:1.11.5-2 autotools-dev_20120608.1 base-files_6.9 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6.1 bsdmainutils_9.0.3 bsdutils_1:2.20.1-5 build-essential_11.5+b1 bzip2_1.0.6-3 chrpath_0.13-2 coreutils_8.13-3.2 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1.1+rpi2 dash_0.5.7-3 debconf_1.5.43 debfoster_2.7-1.1 debhelper_9.20120608 debian-archive-keyring_2012.3 debianutils_4.3.1 dh-autoreconf_6 diffutils_1:3.2-6 dpkg_1.16.3 dpkg-dev_1.16.3 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 fontconfig_2.9.0-6 fontconfig-config_2.9.0-6 g++_4:4.6.2-4 g++-4.6_4.6.3-1.1+rpi2 gcc_4:4.6.2-4 gcc-4.4-base_4.4.7-1.1+rpi1 gcc-4.5-base_4.5.3-12+rpi1 gcc-4.6_4.6.3-1.1+rpi2 gcc-4.6-base_4.6.3-1.1+rpi2 gcc-4.7-base_4.7.0-1.1+rpi gettext_0.18.1.1-9 gettext-base_0.18.1.1-9 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1.1+rpi2 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.12-2 groff-base_1.21-7 gzip_1.4-5 hdf5-helpers_1.8.8-9 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-7 libapt-pkg4.12_0.9.3+rpi1 libasprintf0c2_0.18.1.1-9 libattr1_1:2.4.46-7 libaudio2_1.9.3-5 libblkid1_2.20.1-5 libbz2-1.0_1.0.6-3 libc-bin_2.13-33 libc-dev-bin_2.13-33 libc6_2.13-33 libc6-dev_2.13-33 libclass-isa-perl_0.36-3 libcomerr2_1.42.4-3 libcroco3_0.6.5-1 libdb4.8_4.8.30-11 libdb5.1_5.1.29-1 libdbus-1-3_1.6.0-1 libdpkg-perl_1.16.3 libexpat1_2.1.0-1 libexpat1-dev_2.1.0-1 libffi5_3.0.10-3+b3 libfile-fcntllock-perl_0.14-1 libfontconfig1_2.9.0-6 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-1.1+rpi libgdbm3_1.8.3-11 libgettextpo0_0.18.1.1-9 libgfortran3_4.7.0-1.1+rpi libglib2.0-0_2.32.3-1 libgmp10_2:5.0.5+dfsg-2 libgomp1_4.7.0-1.1+rpi libhdf5-mpi-dev_1.8.8-9 libhdf5-openmpi-7_1.8.8-9 libhdf5-openmpi-dev_1.8.8-9 libibverbs-dev_1.1.6-1 libibverbs1_1.1.6-1 libice6_2:1.0.8-2 libjbig0_2.0-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblcms1_1.19.dfsg-1.1 liblocale-gettext-perl_1.05-7 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmng1_1.0.10-3 libmount1_2.20.1-5 libmpc2_0.9-4 libmpfr4_3.1.0-5 libncurses5_5.9-9 libncursesw5_5.9-9 libopenmpi-dev_1.4.5-1 libopenmpi1.3_1.4.5-1 libpam-modules_1.1.3-7.1 libpam-modules-bin_1.1.3-7.1 libpam-runtime_1.1.3-7.1 libpam0g_1.1.3-7.1 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libpng12-0_1.2.49-1 libpython2.6_2.6.7-4 libpython2.7_2.7.3~rc2-2.1 libqt4-dbus_4:4.8.1-1+rpi1 libqt4-declarative_4:4.8.1-1+rpi1 libqt4-designer_4:4.8.1-1+rpi1 libqt4-dev_4:4.8.1-1+rpi1 libqt4-dev-bin_4:4.8.1-1+rpi1 libqt4-help_4:4.8.1-1+rpi1 libqt4-network_4:4.8.1-1+rpi1 libqt4-qt3support_4:4.8.1-1+rpi1 libqt4-script_4:4.8.1-1+rpi1 libqt4-scripttools_4:4.8.1-1+rpi1 libqt4-sql_4:4.8.1-1+rpi1 libqt4-svg_4:4.8.1-1+rpi1 libqt4-test_4:4.8.1-1+rpi1 libqt4-xml_4:4.8.1-1+rpi1 libqt4-xmlpatterns_4:4.8.1-1+rpi1 libqtcore4_4:4.8.1-1+rpi1 libqtgui4_4:4.8.1-1+rpi1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.9-5 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-3 libslang2_2.2.4-10 libsm6_2:1.2.1-2 libsqlite3-0_3.7.13-1 libss2_1.42.2-2 libssl-dev_1.0.1c-3+rpi1 libssl1.0.0_1.0.1c-3+rpi1 libstdc++6_4.7.0-1.1+rpi libstdc++6-4.6-dev_4.6.3-1.1+rpi2 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtiff4_3.9.6-5 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-9 libtinfo5_5.9-9 libtool_2.4.2-1+b2 libtorque2_2.4.16+dfsg-1 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-5 libx11-6_2:1.5.0-1 libx11-data_2:1.5.0-1 libxau6_1:1.0.7-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.1-1 libxext6_2:1.3.1-2 libxml2_2.8.0+dfsg1-4 libxrender1_1:0.9.7-1 libxt6_1:1.1.3-1 linux-libc-dev_3.2.18-1 login_1:4.1.5.1-1 lsb-base_4.1+Debian6 m4_1.4.16-3 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mime-support_3.52-1 mount_2.20.1-5 mpi-default-dev_1.0.1 multiarch-support_2.13-33 ncurses-base_5.9-7 ncurses-bin_5.9-8 openmpi-common_1.4.5-1 passwd_1:4.1.5.1-1 patch_2.6.1-3 perl_5.14.2-11 perl-base_5.14.2-11 perl-modules_5.14.2-11 po-debconf_1.0.16+nmu2 python_2.7.3~rc2-1 python-all_2.7.3~rc2-1 python-all-dev_2.7.3~rc2-1 python-dev_2.7.3~rc2-1 python-minimal_2.7.3~rc2-1 python2.6_2.6.7-4 python2.6-dev_2.6.7-4 python2.6-minimal_2.6.7-4 python2.7_2.7.3~rc2-2.1 python2.7-dev_2.7.3~rc2-2.1 python2.7-minimal_2.7.3~rc2-2.1 qdbus_4:4.8.1-1+rpi1 qt4-linguist-tools_4:4.8.1-1+rpi1 qt4-qmake_4:4.8.1-1+rpi1 raspbian-archive-keyring_20120528.2 readline-common_6.2-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-silo-llnl-dummy_0.invalid.0 sed_4.2.1-10 sensible-utils_0.0.7 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 ttf-dejavu-core_2.33-2 tzdata_2012c-1 ucf_3.0025+nmu3 util-linux_2.20.1-5 x11-common_1:7.6+13 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-13 zlib1g-dev_1:1.2.7.dfsg-13 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build │ └──────────────────────────────────────────────────────────────────────────────┘ Unpack source ───────────── gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error gpgv: Signature made Sat Jun 16 20:11:03 2012 UTC using RSA key ID 5127742C gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./silo-llnl_4.8-13.dsc dpkg-source: info: extracting silo-llnl in silo-llnl-4.8 dpkg-source: info: unpacking silo-llnl_4.8.orig.tar.gz dpkg-source: info: unpacking silo-llnl_4.8-13.debian.tar.gz dpkg-source: info: applying add-lib-version.patch dpkg-source: info: applying dist-undo.patch dpkg-source: info: applying qt-version.patch dpkg-source: info: applying testsuite-fix.patch dpkg-source: info: applying testsuite-python-write.patch dpkg-source: info: applying testsuite-skip-szip.patch dpkg-source: info: applying test-disable-largefile.patch dpkg-source: info: applying pkgconfig.patch dpkg-source: info: applying version-script.patch dpkg-source: info: applying autoreconf.patch dpkg-source: info: applying security-fix.patch Check disc space ──────────────── Sufficient free space for build User Environment ──────────────── HOME=/sbuild-nonexistent LOGNAME=buildd PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/X11R6/bin:/usr/games SCHROOT_CHROOT_NAME=testing-armhf-sbuild SCHROOT_COMMAND=env SCHROOT_GID=108 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=testing-armhf-sbuild-7cb0c04c-f30a-4eec-9e41-e2558839b22e SCHROOT_UID=106 SCHROOT_USER=buildd SHELL=/bin/sh TERM=xterm USER=buildd dpkg-buildpackage ───────────────── dpkg-buildpackage: source package silo-llnl dpkg-buildpackage: source version 4.8-13 dpkg-source --before-build silo-llnl-4.8 dpkg-buildpackage: host architecture armhf fakeroot debian/rules clean dh clean --with python2,autoreconf dh_testdir debian/rules override_dh_auto_clean make[1]: Entering directory `/«PKGBUILDDIR»' dh_clean rm -f debian/Silo.so.* config.log ( [ -f Makefile ] && make distclean) make[1]: [override_dh_auto_clean] Error 1 (ignored) make[1]: Leaving directory `/«PKGBUILDDIR»' dh_autoreconf_clean dh_clean debian/rules build-arch dh build-arch --with python2,autoreconf dh_testdir -a debian/rules override_dh_autoreconf make[1]: Entering directory `/«PKGBUILDDIR»' libtoolize -c -f libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, `config'. libtoolize: copying file `config/ltmain.sh' libtoolize: putting macros in `config'. libtoolize: copying file `config/libtool.m4' libtoolize: copying file `config/ltoptions.m4' libtoolize: copying file `config/ltsugar.m4' libtoolize: copying file `config/ltversion.m4' libtoolize: copying file `config/lt~obsolete.m4' libtoolize: Consider adding `AC_CONFIG_MACRO_DIR([m4])' to configure.ac and libtoolize: rerunning libtoolize, to keep the correct libtool macros in-tree. dh_autoreconf --as-needed libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, `config'. libtoolize: copying file `config/ltmain.sh' libtoolize: putting macros in `config'. libtoolize: copying file `config/libtool.m4' libtoolize: copying file `config/ltoptions.m4' libtoolize: copying file `config/ltsugar.m4' libtoolize: copying file `config/ltversion.m4' libtoolize: copying file `config/lt~obsolete.m4' libtoolize: Consider adding `AC_CONFIG_MACRO_DIR([m4])' to configure.ac and libtoolize: rerunning libtoolize, to keep the correct libtool macros in-tree. patching file ./config/ltmain.sh make[1]: Leaving directory `/«PKGBUILDDIR»' debian/rules override_dh_auto_configure make[1]: Entering directory `/«PKGBUILDDIR»' LDFLAGS="-Wl,-z,relro -Wl,--as-needed" dh_auto_configure -- --enable-pythonmodule --enable-silex --with-qt=/usr --enable-pythonmodule --enable-silex --with-qt-bin=/usr/bin --with-qt-lib=/usr/lib --with-qt-include=/usr/include/qt4 --with-hdf5=/usr/include,/usr/lib CPPFLAGS=" -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2" CC=mpicc CFLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... gfortran checking whether the Fortran 77 compiler works... yes checking for Fortran 77 compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking what version the package is... 4.8 checking version script options... checking for site config host file... no checking for config-site arm-unknown-linux-gnueabihf... no checking for config-site arm-unknown-linux-gnueabihf... no checking for config-site unknown-linux-gnueabihf... no checking for config-site unknown-linux-gnueabihf... no checking for config-site arm-linux-gnueabihf... no checking for config-site arm-linux-gnueabihf... no checking for config-site arm-unknown... no checking for config-site linux-gnueabihf... no checking for config-site linux-gnueabihf... no checking for config-site unknown... no checking for config-site arm... no checking for config-site Linux... found checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for style of include used by make... GNU checking dependency style of g++... none checking for gcc... mpicc checking whether we are using the GNU C compiler... yes checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking dependency style of mpicc... none checking how to run the C preprocessor... mpicc -E checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking whether make sets $(MAKE)... (cached) yes checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 805306365 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... yes checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for library containing strerror... none required checking for hzip... hzip compression not available in BSD version checking for fpzip... fpzip compression not available in BSD version checking compiler optimization... disabled checking whether C compiler accepts "-D_LARGEFILE_SOURCE"... yes checking whether C compiler accepts "-D_LARGEFILE64_SOURCE"... yes checking whether C compiler accepts "-D_FILE_OFFSET_BITS=64"... yes checking whether C compiler accepts "-Wdeclaration-after-statement"... yes checking size of off64_t... 8 checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking for sys/stat.h... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking sys/fcntl.h usability... yes checking sys/fcntl.h presence... yes checking for sys/fcntl.h... yes checking fnmatch.h usability... yes checking fnmatch.h presence... yes checking for fnmatch.h... yes checking ieeefp.h usability... no checking ieeefp.h presence... no checking for ieeefp.h... no checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for ANSI C header files... (cached) yes checking for fclose function pointer... yes checking for fflush function pointer... yes checking for fopen function pointer... yes checking for fprintf function pointer... yes checking for fread function pointer... yes checking for fseek function pointer... yes checking for setvbuf function pointer... yes checking for ftell function pointer... yes checking for fwrite function pointer... yes checking for memmove... yes checking for fnmatch... yes checking for isnan... yes checking for fpclass... no checking for strerror... yes checking if setjmp and longjmp work... yes checking for cos in -lm... yes checking for szlib... suppressed checking for hdf5... configure: checking for hdf5 and supporting libraries... checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for H5open... yes checking for a readline compatible library... -lreadline checking readline.h usability... no checking readline.h presence... no checking for readline.h... no checking readline/readline.h usability... yes checking readline/readline.h presence... yes checking for readline/readline.h... yes checking whether readline supports history... yes checking history.h usability... no checking history.h presence... no checking for history.h... no checking readline/history.h usability... yes checking readline/history.h presence... yes checking for readline/history.h... yes checking for supported Qt version... Qt in Qt 4.8.1 in /usr/include/qt4 checking for a Python interpreter with version >= 2.1... python checking for python... /usr/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/dist-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/dist-packages checking for Python include path... -I/usr/include/python2.7 configure: creating ./config.status config.status: creating Makefile config.status: creating SiloWindows/Makefile config.status: creating svn_bin/Makefile config.status: creating config/Makefile config.status: creating config-site/Makefile config.status: creating docs/Makefile config.status: creating src/Makefile config.status: creating src/score/Makefile config.status: creating src/pdb/Makefile config.status: creating src/silo/Makefile config.status: creating src/silo/silo.h config.status: creating src/debug/Makefile config.status: creating src/netcdf/Makefile config.status: creating src/pdb_drv/Makefile config.status: creating src/pdbp_drv/Makefile config.status: creating src/hdf5_drv/Makefile config.status: creating src/taurus/Makefile config.status: creating src/unknown/Makefile config.status: creating src/filters/Makefile config.status: creating tests/Makefile config.status: creating tools/Makefile config.status: creating tools/browser/Makefile config.status: creating tools/python/Makefile config.status: creating tools/silex/Makefile config.status: creating tools/silock/Makefile config.status: creating silo.pc config.status: creating src/libsiloh5.settings config.status: creating config.h config.status: executing tests/atconfig commands config.status: executing depfiles commands config.status: executing libtool commands SUMMARY OF THE Silo with HDF5 CONFIGURATION ================================= Silo Version: 4.8 Configured on: Mon Jun 25 10:50:26 UTC 2012 Configured by: buildd@build04.raspbian.lan Configure command: ./configure '--build=arm-linux-gnueabihf' '--prefix=/usr' '--includedir=${prefix}/include' '--mandir=${prefix}/share/man' '--infodir=${prefix}/share/info' '--sysconfdir=/etc' '--localstatedir=/var' '--libdir=${prefix}/lib/arm-linux-gnueabihf' '--libexecdir=${prefix}/lib/arm-linux-gnueabihf' '--disable-maintainer-mode' '--disable-dependency-tracking' '--with-qt=/usr' '--enable-pythonmodule' '--enable-silex' '--with-qt-bin=/usr/bin' '--with-qt-lib=/usr/lib' '--with-qt-include=/usr/include/qt4' '--with-hdf5=/usr/include,/usr/lib' 'CPPFLAGS= -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2' 'CC=mpicc' 'CFLAGS=-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security' 'build_alias=arm-linux-gnueabihf' 'FFLAGS=-g -O2' 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed' 'CXXFLAGS=-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security' Host system: arm-unknown-linux-gnueabihf Build system: arm-unknown-linux-gnueabihf Installation point: /usr Source directory: @UsingSrcDir@ Archiver: ar Ranlib: ranlib Configure Summary Compiling Options: C Compiler /usr/bin/mpicc CPPFLAGS -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 CFLAGS -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement LDFLAGS -L/usr/lib -Wl,-z,relro -Wl,--as-needed LIBS -lhdf5 -lm Languages: C++ Compiler /usr/bin/g++ CXXFLAGS -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security Fortran Compiler /usr/bin/gfortran FCFLAGS -g -O2 FCLIBS -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm Features: Browser @UsingBrowser@ Readline @UsingReadline@ HDF5 @UsingHDF5@ Silex @UsingSilex@ Qt @UsingQt@ Qt moc Compiler $(QT_BIN)/moc Qt CXXFLAGS -I$(QT_INCLUDE) -I$(QT_INCLUDE)/Qt -I$(QT_INCLUDE)/QtCore -I$(QT_INCLUDE)/QtGui Qt LIBS $(QT_CORE_LIB) $(QT_GUI_LIB) Python @UsingPython@ Python Compiler /usr/bin/python Python CPPFLAGS -I/usr/include/python2.7 make[1]: Leaving directory `/«PKGBUILDDIR»' debian/rules override_dh_auto_build make[1]: Entering directory `/«PKGBUILDDIR»' dh_auto_build make[2]: Entering directory `/«PKGBUILDDIR»' make all-recursive make[3]: Entering directory `/«PKGBUILDDIR»' Making all in . make[4]: Entering directory `/«PKGBUILDDIR»' make[4]: Nothing to be done for `all-am'. make[4]: Leaving directory `/«PKGBUILDDIR»' Making all in src make[4]: Entering directory `/«PKGBUILDDIR»/src' make all-recursive make[5]: Entering directory `/«PKGBUILDDIR»/src' Making all in score make[6]: Entering directory `/«PKGBUILDDIR»/src/score' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o memmove.lo memmove.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c memmove.c -fPIC -DPIC -o .libs/memmove.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c memmove.c -o memmove.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o scctla.lo scctla.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c scctla.c -fPIC -DPIC -o .libs/scctla.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c scctla.c -o scctla.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o scctl.lo scctl.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c scctl.c -fPIC -DPIC -o .libs/scctl.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c scctl.c -o scctl.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o schash.lo schash.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c schash.c -fPIC -DPIC -o .libs/schash.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c schash.c -o schash.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o scstr.lo scstr.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c scstr.c -fPIC -DPIC -o .libs/scstr.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c scstr.c -o scstr.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o libsilo_score.la memmove.lo scctla.lo scctl.lo schash.lo scstr.lo -lhdf5 -lm libtool: link: ar cru .libs/libsilo_score.a .libs/memmove.o .libs/scctla.o .libs/scctl.o .libs/schash.o .libs/scstr.o libtool: link: ranlib .libs/libsilo_score.a libtool: link: ( cd ".libs" && rm -f "libsilo_score.la" && ln -s "../libsilo_score.la" "libsilo_score.la" ) make[6]: Leaving directory `/«PKGBUILDDIR»/src/score' Making all in pdb make[6]: Entering directory `/«PKGBUILDDIR»/src/pdb' mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c detect.c mpicc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -o detect detect.o ./detect >> pdform.h make all-am make[7]: Entering directory `/«PKGBUILDDIR»/src/pdb' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdb.lo pdb.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdb.c -fPIC -DPIC -o .libs/pdb.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdb.c -o pdb.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdbdir.lo pdbdir.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdbdir.c -fPIC -DPIC -o .libs/pdbdir.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdbdir.c -o pdbdir.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdbio.lo pdbio.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdbio.c -fPIC -DPIC -o .libs/pdbio.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdbio.c -o pdbio.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdbmm.lo pdbmm.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdbmm.c -fPIC -DPIC -o .libs/pdbmm.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdbmm.c -o pdbmm.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdbx.lo pdbx.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdbx.c -fPIC -DPIC -o .libs/pdbx.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdbx.c -o pdbx.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdconv.lo pdconv.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdconv.c -fPIC -DPIC -o .libs/pdconv.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdconv.c -o pdconv.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdlow.lo pdlow.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdlow.c -fPIC -DPIC -o .libs/pdlow.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdlow.c -o pdlow.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdmemb.lo pdmemb.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdmemb.c -fPIC -DPIC -o .libs/pdmemb.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdmemb.c -o pdmemb.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdpath.lo pdpath.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdpath.c -fPIC -DPIC -o .libs/pdpath.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdpath.c -o pdpath.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdrdwr.lo pdrdwr.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdrdwr.c -fPIC -DPIC -o .libs/pdrdwr.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdrdwr.c -o pdrdwr.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o libsilo_pdb.la pdb.lo pdbdir.lo pdbio.lo pdbmm.lo pdbx.lo pdconv.lo pdlow.lo pdmemb.lo pdpath.lo pdrdwr.lo -lhdf5 -lm libtool: link: ar cru .libs/libsilo_pdb.a .libs/pdb.o .libs/pdbdir.o .libs/pdbio.o .libs/pdbmm.o .libs/pdbx.o .libs/pdconv.o .libs/pdlow.o .libs/pdmemb.o .libs/pdpath.o .libs/pdrdwr.o libtool: link: ranlib .libs/libsilo_pdb.a libtool: link: ( cd ".libs" && rm -f "libsilo_pdb.la" && ln -s "../libsilo_pdb.la" "libsilo_pdb.la" ) make[7]: Leaving directory `/«PKGBUILDDIR»/src/pdb' make[6]: Leaving directory `/«PKGBUILDDIR»/src/pdb' Making all in silo make[6]: Entering directory `/«PKGBUILDDIR»/src/silo' make all-am make[7]: Entering directory `/«PKGBUILDDIR»/src/silo' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o alloc.lo alloc.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c alloc.c -fPIC -DPIC -o .libs/alloc.o alloc.c: In function 'DBAllocGroupelmap': alloc.c:1916:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:1916:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocNamescheme': alloc.c:1898:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:1898:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocCurve': alloc.c:1769:4: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:1769:4: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocCompoundarray': alloc.c:1708:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:1708:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocMatspecies': alloc.c:1625:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:1625:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocMaterial': alloc.c:1557:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:1557:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocFacelist': alloc.c:1504:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:1504:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocEdgelist': alloc.c:1456:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:1456:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocCSGZonelist': alloc.c:1337:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:1337:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocPHZonelist': alloc.c:1312:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:1312:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocZonelist': alloc.c:1287:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:1287:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocUcdvar': alloc.c:1201:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:1201:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocQuadvar': alloc.c:1115:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:1115:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocCsgvar': alloc.c:1054:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:1054:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocUcdmesh': alloc.c:980:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:980:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocMeshvar': alloc.c:911:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:911:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocPointmesh': alloc.c:849:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:849:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocQuadmesh': alloc.c:785:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:785:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocCsgmesh': alloc.c:705:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:705:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocMultimatspecies': alloc.c:382:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:382:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocMultimat': alloc.c:333:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:333:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocMultivar': alloc.c:283:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:283:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocMultimeshadj': alloc.c:235:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:235:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocMultimesh': alloc.c:178:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:178:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c: In function 'DBAllocDefvars': alloc.c:124:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] alloc.c:124:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c alloc.c -o alloc.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o extface.lo extface.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c extface.c -fPIC -DPIC -o .libs/extface.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c extface.c -o extface.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo.lo silo.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo.c -fPIC -DPIC -o .libs/silo.o silo.c: In function 'DBGetMrgvar': silo.c:13371:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:13371:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutMrgvar': silo.c:13331:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:13331:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetGroupelmap': silo.c:13308:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:13308:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutGroupelmap': silo.c:13271:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:13271:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetMrgtree': silo.c:13247:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:13247:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutMrgtree': silo.c:13214:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:13214:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetCwr': silo.c:13197:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:13197:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBSetCwr': silo.c:13156:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:13156:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBAddRegionArray': silo.c:13063:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:13063:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBAddRegion': silo.c:12971:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:12971:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBMakeMrgtree': silo.c:12908:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:12908:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBSortObjectsByOffset': silo.c:11927:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:11927:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetComponentNames': silo.c:11227:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:11227:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBInqCompoundarray': silo.c:11151:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:11151:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetCsgvar': silo.c:9320:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:9320:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutCsgvar': silo.c:9257:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:9257:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetCSGZonelist': silo.c:9217:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:9217:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutCSGZonelist': silo.c:9161:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:9161:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetCsgmesh': silo.c:9118:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:9118:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutCsgmesh': silo.c:9058:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:9058:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutPHZonelist': silo.c:8989:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8989:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutZonelist2': silo.c:8917:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8917:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutZonelist': silo.c:8842:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8842:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutUcdvar1': silo.c:8794:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8794:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutUcdvar': silo.c:8724:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8724:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutUcdsubmesh': silo.c:8649:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8649:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutUcdmesh': silo.c:8589:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8589:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutQuadvar1': silo.c:8538:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8538:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutQuadvar': silo.c:8463:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8463:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutQuadmesh': silo.c:8391:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8391:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutPointvar1': silo.c:8340:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8340:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutPointvar': silo.c:8281:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8281:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutPointmesh': silo.c:8221:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8221:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutMultimatspecies': silo.c:8161:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8161:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutMultimat': silo.c:8101:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8101:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutMultivar': silo.c:8038:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:8038:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutMultimeshadj': silo.c:7969:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7969:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutMultimesh': silo.c:7911:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7911:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutMatspecies': silo.c:7827:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7827:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutMaterial': silo.c:7728:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7728:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutFacelist': silo.c:7645:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7645:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutDefvars': silo.c:7577:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7577:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutCurve': silo.c:7532:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7532:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPutCompoundarray': silo.c:7469:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7469:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBInqMeshtype': silo.c:7421:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7421:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBInqMeshname': silo.c:7378:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7378:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetVarType': silo.c:7334:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7334:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetVarDims': silo.c:7288:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7288:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetVarLength': silo.c:7246:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7246:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetVarByteLength': silo.c:7206:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7206:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBReadVarSlice': silo.c:7155:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7155:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBReadVar1': silo.c:7111:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7111:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBReadVar': silo.c:7069:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7069:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetVar': silo.c:7025:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:7025:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetPHZonelist': silo.c:6984:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6984:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetZonelist': silo.c:6950:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6950:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetFacelist': silo.c:6907:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6907:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetUcdvar': silo.c:6864:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6864:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetUcdmesh': silo.c:6785:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6785:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetQuadvar1': silo.c:6630:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6630:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetQuadvar': silo.c:6591:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6591:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetQuadmesh': silo.c:6510:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6510:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetPointvar': silo.c:6461:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6461:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetPointmesh': silo.c:6417:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6417:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetMultimatspecies': silo.c:6373:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6373:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetMultimat': silo.c:6331:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6331:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetMultivar': silo.c:6289:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6289:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetMultimeshadj': silo.c:6242:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6242:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetMultimesh': silo.c:6205:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6205:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetMatspecies': silo.c:6160:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6160:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetMaterial': silo.c:6104:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6104:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetDefvars': silo.c:6062:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6062:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetCurve': silo.c:6027:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:6027:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetCompoundarray': silo.c:5989:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5989:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBReadAtt': silo.c:5944:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5944:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBWriteSlice': silo.c:5871:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5871:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBWrite': silo.c:5801:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5801:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBWriteComponent': silo.c:5716:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5716:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetObject': silo.c:5656:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5656:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBWriteObject': silo.c:5609:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5609:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBChangeObject': silo.c:5557:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5557:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBCpDir': silo.c:5500:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5500:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBMkDir': silo.c:5462:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5462:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBFilters': silo.c:5413:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5413:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBListDir': silo.c:5371:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5371:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBSetDirID': silo.c:5320:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5320:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBSetDir': silo.c:5266:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5266:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetDir': silo.c:5216:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5216:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetComponentType': silo.c:5175:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5175:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetComponent': silo.c:5128:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5128:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetAtt': silo.c:5061:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5061:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBNewToc': silo.c:5017:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:5017:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBInqVarType': silo.c:4974:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4974:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBGetToc': silo.c:4938:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4938:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBClearOption': silo.c:4850:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4850:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBAddOption': silo.c:4817:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4817:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBClearOptlist': silo.c:4774:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4774:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBFreeOptlist': silo.c:4734:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4734:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBMakeOptlist': silo.c:4689:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4689:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBForceSingle': silo.c:4652:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4652:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBInqVarExists': silo.c:4591:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4591:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBContinue': silo.c:4555:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4555:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBPause': silo.c:4519:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4519:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBInqFileReal': silo.c:4457:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4457:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBClose': silo.c:4318:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4318:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBCreateReal': silo.c:4203:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4203:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBOpenReal': silo.c:4010:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:4010:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBAddStrComponent': silo.c:3564:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:3564:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBAddDblComponent': silo.c:3504:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:3504:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBAddFltComponent': silo.c:3453:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:3453:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBAddIntComponent': silo.c:3388:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:3388:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBAddVarComponent': silo.c:3327:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:3327:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBClearObject': silo.c:3274:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:3274:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBFreeObject': silo.c:3223:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:3223:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBMakeObject': silo.c:3165:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:3165:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBJoinPath': silo.c:3117:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:3117:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBUnregisterFileOptionsSet': silo.c:2968:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:2968:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBRegisterFileOptionsSet': silo.c:2949:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:2949:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBFreeCompressionResources': silo.c:2763:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:2763:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBUninstall': silo.c:2604:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:2604:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c: In function 'DBFilterRegistration': silo.c:2538:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo.c:2538:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo.c -o silo.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo_ns.lo silo_ns.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_ns.c -fPIC -DPIC -o .libs/silo_ns.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_ns.c -o silo_ns.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo_f.lo silo_f.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_f.c -fPIC -DPIC -o .libs/silo_f.o silo_f.c: In function 'dbpmrgv_': silo_f.c:5273:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:5273:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputcsgzl_': silo_f.c:5198:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:5198:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputcsgv_': silo_f.c:5124:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:5124:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputcsgm_': silo_f.c:5044:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:5044:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputgrplmap_': silo_f.c:4969:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4969:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputmrgtree_': silo_f.c:4885:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4885:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbsetcwr_': silo_f.c:4824:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4824:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbaddregiona_': silo_f.c:4735:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4735:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbaddregion_': silo_f.c:4653:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4653:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbfreemrgtree_': silo_f.c:4610:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4610:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbmkmrgtree_': silo_f.c:4570:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4570:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbunregafopts_': silo_f.c:4533:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4533:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbunregfopts_': silo_f.c:4524:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4524:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbregfopts_': silo_f.c:4514:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4514:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbgetdepwarn_': silo_f.c:4503:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4503:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbsetdepwarn_': silo_f.c:4475:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4475:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbgethdfnms_': silo_f.c:4447:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4447:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbsethdfnms_': silo_f.c:4416:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4416:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbgetcompress_': silo_f.c:4377:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4377:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbsetcompress_': silo_f.c:4324:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4324:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbgetcksums_': silo_f.c:4282:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4282:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbsetcksums_': silo_f.c:4250:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4250:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbgetovrwrt_': silo_f.c:4218:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4218:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbsetovrwrt_': silo_f.c:4186:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4186:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbget2dstrlen_': silo_f.c:4154:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4154:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbset2dstrlen_': silo_f.c:4119:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4119:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbinqfile_': silo_f.c:4069:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:4069:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbgetqv1_': silo_f.c:3981:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3981:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbfreeobject_': silo_f.c:3928:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3928:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbmkobject_': silo_f.c:3884:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3884:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbaddccmp_': silo_f.c:3841:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3841:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbaddrcmp_': silo_f.c:3795:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3795:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbaddicmp_': silo_f.c:3756:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3756:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbinqca_': silo_f.c:3683:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3683:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbgetcurve_': silo_f.c:3593:4: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3593:4: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputcurve_': silo_f.c:3529:4: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3529:4: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbfgetca_': silo_f.c:3480:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3480:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbgetca_': silo_f.c:3376:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3376:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputca_': silo_f.c:3265:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3265:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbwrite_': silo_f.c:3188:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3188:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbsetdirid_': silo_f.c:3098:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3098:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbsetdir_': silo_f.c:3031:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:3031:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbwriteslice_': silo_f.c:2957:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:2957:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbrdvarslice_': silo_f.c:2889:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:2889:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbrdvar_': silo_f.c:2817:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:2817:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputzl2_': silo_f.c:2744:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:2744:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputzl_': silo_f.c:2681:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:2681:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputuv1_': silo_f.c:2593:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:2593:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputum_': silo_f.c:2425:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:2425:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputqv_': silo_f.c:2260:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:2260:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputqv1_': silo_f.c:2180:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:2180:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputqm_': silo_f.c:2043:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:2043:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputpv1_': silo_f.c:1946:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:1946:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputpm_': silo_f.c:1870:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:1870:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputmmat_': silo_f.c:1763:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:1763:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputmvar_': silo_f.c:1665:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:1665:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputdefvars_': silo_f.c:1522:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:1522:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputmmesh_': silo_f.c:1421:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:1421:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbwrtfl_': silo_f.c:1333:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:1333:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputfl_': silo_f.c:1263:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:1263:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbopen_': silo_f.c:1185:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:1185:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbmkdir_': silo_f.c:1109:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:1109:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbinqlen_': silo_f.c:1034:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:1034:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbcreate_': silo_f.c:952:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:952:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbclose_': silo_f.c:900:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:900:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbcalcfl_': silo_f.c:844:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:844:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputmsp_': silo_f.c:747:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:747:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbputmat_': silo_f.c:659:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:659:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbfreeoptlist_': silo_f.c:602:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:602:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbmkoptlist_': silo_f.c:561:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:561:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbaddcaopt_': silo_f.c:493:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:493:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbaddcopt_': silo_f.c:426:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:426:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbadddopt_': silo_f.c:367:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:367:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbaddropt_': silo_f.c:323:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:323:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c: In function 'dbaddiopt_': silo_f.c:279:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] silo_f.c:279:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_f.c -o silo_f.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o libsilo_silo.la alloc.lo extface.lo silo.lo silo_ns.lo silo_f.lo -lhdf5 -lm libtool: link: ar cru .libs/libsilo_silo.a .libs/alloc.o .libs/extface.o .libs/silo.o .libs/silo_ns.o .libs/silo_f.o libtool: link: ranlib .libs/libsilo_silo.a libtool: link: ( cd ".libs" && rm -f "libsilo_silo.la" && ln -s "../libsilo_silo.la" "libsilo_silo.la" ) make[7]: Leaving directory `/«PKGBUILDDIR»/src/silo' make[6]: Leaving directory `/«PKGBUILDDIR»/src/silo' Making all in debug make[6]: Entering directory `/«PKGBUILDDIR»/src/debug' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo_debug.lo silo_debug.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_debug.c -fPIC -DPIC -o .libs/silo_debug.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_debug.c -o silo_debug.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o libsilo_debug.la silo_debug.lo -lhdf5 -lm libtool: link: ar cru .libs/libsilo_debug.a .libs/silo_debug.o libtool: link: ranlib .libs/libsilo_debug.a libtool: link: ( cd ".libs" && rm -f "libsilo_debug.la" && ln -s "../libsilo_debug.la" "libsilo_debug.la" ) make[6]: Leaving directory `/«PKGBUILDDIR»/src/debug' Making all in netcdf make[6]: Entering directory `/«PKGBUILDDIR»/src/netcdf' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o api.lo api.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c api.c -fPIC -DPIC -o .libs/api.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c api.c -o api.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o ent.lo ent.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c ent.c -fPIC -DPIC -o .libs/ent.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c ent.c -o ent.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o netcdf.lo netcdf.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c netcdf.c -fPIC -DPIC -o .libs/netcdf.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c netcdf.c -o netcdf.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o obj.lo obj.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c obj.c -fPIC -DPIC -o .libs/obj.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c obj.c -o obj.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo_netcdf.lo silo_netcdf.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_netcdf.c -fPIC -DPIC -o .libs/silo_netcdf.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_netcdf.c -o silo_netcdf.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o table.lo table.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c table.c -fPIC -DPIC -o .libs/table.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c table.c -o table.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o libsilo_netcdf.la api.lo ent.lo netcdf.lo obj.lo silo_netcdf.lo table.lo -lhdf5 -lm libtool: link: ar cru .libs/libsilo_netcdf.a .libs/api.o .libs/ent.o .libs/netcdf.o .libs/obj.o .libs/silo_netcdf.o .libs/table.o libtool: link: ranlib .libs/libsilo_netcdf.a libtool: link: ( cd ".libs" && rm -f "libsilo_netcdf.la" && ln -s "../libsilo_netcdf.la" "libsilo_netcdf.la" ) make[6]: Leaving directory `/«PKGBUILDDIR»/src/netcdf' Making all in pdb_drv make[6]: Entering directory `/«PKGBUILDDIR»/src/pdb_drv' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo_pdb.lo silo_pdb.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_pdb.c -fPIC -DPIC -o .libs/silo_pdb.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_pdb.c -o silo_pdb.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o libsilo_pdb_drv.la silo_pdb.lo -lhdf5 -lm libtool: link: ar cru .libs/libsilo_pdb_drv.a .libs/silo_pdb.o libtool: link: ranlib .libs/libsilo_pdb_drv.a libtool: link: ( cd ".libs" && rm -f "libsilo_pdb_drv.la" && ln -s "../libsilo_pdb_drv.la" "libsilo_pdb_drv.la" ) make[6]: Leaving directory `/«PKGBUILDDIR»/src/pdb_drv' Making all in hdf5_drv make[6]: Entering directory `/«PKGBUILDDIR»/src/hdf5_drv' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo_hdf5.lo silo_hdf5.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_hdf5.c -fPIC -DPIC -o .libs/silo_hdf5.o silo_hdf5.c: In function 'db_hdf5_process_file_options': silo_hdf5.c:4559:2: warning: #warning REMOVED WINDOWS SPECIFIC CHECK [-Wcpp] silo_hdf5.c:4700:2: warning: #warning REMOVED WINDOWS SPECIFIC CHECK [-Wcpp] libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_hdf5.c -o silo_hdf5.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o H5FDsilo.lo H5FDsilo.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c H5FDsilo.c -fPIC -DPIC -o .libs/H5FDsilo.o H5FDsilo.c: In function 'H5FD_silo_close': H5FDsilo.c:1600:9: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'int' [-Wformat] libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c H5FDsilo.c -o H5FDsilo.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o libsilo_hdf5_drv.la silo_hdf5.lo H5FDsilo.lo -lhdf5 -lm libtool: link: ar cru .libs/libsilo_hdf5_drv.a .libs/silo_hdf5.o .libs/H5FDsilo.o libtool: link: ranlib .libs/libsilo_hdf5_drv.a libtool: link: ( cd ".libs" && rm -f "libsilo_hdf5_drv.la" && ln -s "../libsilo_hdf5_drv.la" "libsilo_hdf5_drv.la" ) make[6]: Leaving directory `/«PKGBUILDDIR»/src/hdf5_drv' Making all in taurus make[6]: Entering directory `/«PKGBUILDDIR»/src/taurus' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo_taurus.lo silo_taurus.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_taurus.c -fPIC -DPIC -o .libs/silo_taurus.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_taurus.c -o silo_taurus.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o taurus.lo taurus.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c taurus.c -fPIC -DPIC -o .libs/taurus.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c taurus.c -o taurus.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o libsilo_taurus.la silo_taurus.lo taurus.lo -lhdf5 -lm libtool: link: ar cru .libs/libsilo_taurus.a .libs/silo_taurus.o .libs/taurus.o libtool: link: ranlib .libs/libsilo_taurus.a libtool: link: ( cd ".libs" && rm -f "libsilo_taurus.la" && ln -s "../libsilo_taurus.la" "libsilo_taurus.la" ) make[6]: Leaving directory `/«PKGBUILDDIR»/src/taurus' Making all in unknown make[6]: Entering directory `/«PKGBUILDDIR»/src/unknown' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo_unknown.lo silo_unknown.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_unknown.c -fPIC -DPIC -o .libs/silo_unknown.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_unknown.c -o silo_unknown.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o libsilo_unknown.la silo_unknown.lo -lhdf5 -lm libtool: link: ar cru .libs/libsilo_unknown.a .libs/silo_unknown.o libtool: link: ranlib .libs/libsilo_unknown.a libtool: link: ( cd ".libs" && rm -f "libsilo_unknown.la" && ln -s "../libsilo_unknown.la" "libsilo_unknown.la" ) make[6]: Leaving directory `/«PKGBUILDDIR»/src/unknown' Making all in filters make[6]: Entering directory `/«PKGBUILDDIR»/src/filters' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o f_ale3d.lo f_ale3d.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c f_ale3d.c -fPIC -DPIC -o .libs/f_ale3d.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c f_ale3d.c -o f_ale3d.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o f_sample.lo f_sample.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c f_sample.c -fPIC -DPIC -o .libs/f_sample.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c f_sample.c -o f_sample.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o libsilo_filters.la f_ale3d.lo f_sample.lo -lhdf5 -lm libtool: link: ar cru .libs/libsilo_filters.a .libs/f_ale3d.o .libs/f_sample.o libtool: link: ranlib .libs/libsilo_filters.a libtool: link: ( cd ".libs" && rm -f "libsilo_filters.la" && ln -s "../libsilo_filters.la" "libsilo_filters.la" ) make[6]: Leaving directory `/«PKGBUILDDIR»/src/filters' Making all in . make[6]: Entering directory `/«PKGBUILDDIR»/src' /bin/bash ../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o siloh5_version.lo siloh5_version.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c siloh5_version.c -fPIC -DPIC -o .libs/siloh5_version.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c siloh5_version.c -o siloh5_version.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -export-dynamic -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o libsiloh5.la -rpath /usr/lib/arm-linux-gnueabihf siloh5_version.lo score/libsilo_score.la pdb/libsilo_pdb.la silo/libsilo_silo.la debug/libsilo_debug.la netcdf/libsilo_netcdf.la pdb_drv/libsilo_pdb_drv.la hdf5_drv/libsilo_hdf5_drv.la taurus/libsilo_taurus.la unknown/libsilo_unknown.la filters/libsilo_filters.la -lhdf5 -lm libtool: link: mpicc -shared -fPIC -DPIC .libs/siloh5_version.o -Wl,--whole-archive score/.libs/libsilo_score.a pdb/.libs/libsilo_pdb.a silo/.libs/libsilo_silo.a debug/.libs/libsilo_debug.a netcdf/.libs/libsilo_netcdf.a pdb_drv/.libs/libsilo_pdb_drv.a hdf5_drv/.libs/libsilo_hdf5_drv.a taurus/.libs/libsilo_taurus.a unknown/.libs/libsilo_unknown.a filters/.libs/libsilo_filters.a -Wl,--no-whole-archive -L/usr/lib -Wl,--as-needed -lhdf5 -lm -O2 -Wl,-z -Wl,relro -Wl,-soname -Wl,libsiloh5.so.0 -o .libs/libsiloh5.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libsiloh5.so.0" && ln -s "libsiloh5.so.0.0.0" "libsiloh5.so.0") libtool: link: (cd ".libs" && rm -f "libsiloh5.so" && ln -s "libsiloh5.so.0.0.0" "libsiloh5.so") libtool: link: (cd .libs/libsiloh5.lax/libsilo_score.a && ar x "/«PKGBUILDDIR»/src/score/.libs/libsilo_score.a") libtool: link: (cd .libs/libsiloh5.lax/libsilo_pdb.a && ar x "/«PKGBUILDDIR»/src/pdb/.libs/libsilo_pdb.a") libtool: link: (cd .libs/libsiloh5.lax/libsilo_silo.a && ar x "/«PKGBUILDDIR»/src/silo/.libs/libsilo_silo.a") libtool: link: (cd .libs/libsiloh5.lax/libsilo_debug.a && ar x "/«PKGBUILDDIR»/src/debug/.libs/libsilo_debug.a") libtool: link: (cd .libs/libsiloh5.lax/libsilo_netcdf.a && ar x "/«PKGBUILDDIR»/src/netcdf/.libs/libsilo_netcdf.a") libtool: link: (cd .libs/libsiloh5.lax/libsilo_pdb_drv.a && ar x "/«PKGBUILDDIR»/src/pdb_drv/.libs/libsilo_pdb_drv.a") libtool: link: (cd .libs/libsiloh5.lax/libsilo_hdf5_drv.a && ar x "/«PKGBUILDDIR»/src/hdf5_drv/.libs/libsilo_hdf5_drv.a") libtool: link: (cd .libs/libsiloh5.lax/libsilo_taurus.a && ar x "/«PKGBUILDDIR»/src/taurus/.libs/libsilo_taurus.a") libtool: link: (cd .libs/libsiloh5.lax/libsilo_unknown.a && ar x "/«PKGBUILDDIR»/src/unknown/.libs/libsilo_unknown.a") libtool: link: (cd .libs/libsiloh5.lax/libsilo_filters.a && ar x "/«PKGBUILDDIR»/src/filters/.libs/libsilo_filters.a") libtool: link: ar cru .libs/libsiloh5.a siloh5_version.o .libs/libsiloh5.lax/libsilo_score.a/memmove.o .libs/libsiloh5.lax/libsilo_score.a/scctl.o .libs/libsiloh5.lax/libsilo_score.a/scctla.o .libs/libsiloh5.lax/libsilo_score.a/schash.o .libs/libsiloh5.lax/libsilo_score.a/scstr.o .libs/libsiloh5.lax/libsilo_pdb.a/pdb.o .libs/libsiloh5.lax/libsilo_pdb.a/pdbdir.o .libs/libsiloh5.lax/libsilo_pdb.a/pdbio.o .libs/libsiloh5.lax/libsilo_pdb.a/pdbmm.o .libs/libsiloh5.lax/libsilo_pdb.a/pdbx.o .libs/libsiloh5.lax/libsilo_pdb.a/pdconv.o .libs/libsiloh5.lax/libsilo_pdb.a/pdlow.o .libs/libsiloh5.lax/libsilo_pdb.a/pdmemb.o .libs/libsiloh5.lax/libsilo_pdb.a/pdpath.o .libs/libsiloh5.lax/libsilo_pdb.a/pdrdwr.o .libs/libsiloh5.lax/libsilo_silo.a/alloc.o .libs/libsiloh5.lax/libsilo_silo.a/extface.o .libs/libsiloh5.lax/libsilo_silo.a/silo.o .libs/libsiloh5.lax/libsilo_silo.a/silo_f.o .libs/libsiloh5.lax/libsilo_silo.a/silo_ns.o .libs/libsiloh5.lax/libsilo_debug.a/silo_debug.o .libs/libsiloh5.lax/libsilo_netcdf.a/api.o .libs/libsiloh5.lax/libsilo_netcdf.a/ent.o .libs/libsiloh5.lax/libsilo_netcdf.a/netcdf.o .libs/libsiloh5.lax/libsilo_netcdf.a/obj.o .libs/libsiloh5.lax/libsilo_netcdf.a/silo_netcdf.o .libs/libsiloh5.lax/libsilo_netcdf.a/table.o .libs/libsiloh5.lax/libsilo_pdb_drv.a/silo_pdb.o .libs/libsiloh5.lax/libsilo_hdf5_drv.a/H5FDsilo.o .libs/libsiloh5.lax/libsilo_hdf5_drv.a/silo_hdf5.o .libs/libsiloh5.lax/libsilo_taurus.a/silo_taurus.o .libs/libsiloh5.lax/libsilo_taurus.a/taurus.o .libs/libsiloh5.lax/libsilo_unknown.a/silo_unknown.o .libs/libsiloh5.lax/libsilo_filters.a/f_ale3d.o .libs/libsiloh5.lax/libsilo_filters.a/f_sample.o libtool: link: ranlib .libs/libsiloh5.a libtool: link: rm -fr .libs/libsiloh5.lax libtool: link: ( cd ".libs" && rm -f "libsiloh5.la" && ln -s "../libsiloh5.la" "libsiloh5.la" ) make[6]: Leaving directory `/«PKGBUILDDIR»/src' make[5]: Leaving directory `/«PKGBUILDDIR»/src' make[4]: Leaving directory `/«PKGBUILDDIR»/src' Making all in tools make[4]: Entering directory `/«PKGBUILDDIR»/tools' Making all in . make[5]: Entering directory `/«PKGBUILDDIR»/tools' make[5]: Nothing to be done for `all-am'. make[5]: Leaving directory `/«PKGBUILDDIR»/tools' Making all in browser make[5]: Entering directory `/«PKGBUILDDIR»/tools/browser' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c array.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c bif.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c browser.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c cons.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c file.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c func.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c lex.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c num.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c obj.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c output.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c parse.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c prim.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c ptr.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c range.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c sdo.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c stc.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c str.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c switch.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c sym.c sym.c: In function 'sym_bi_set': sym.c:590:15: warning: ignoring return value of 'strtod', declared with attribute warn_unused_result [-Wunused-result] /bin/bash ../../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o browser array.o bif.o browser.o cons.o file.o func.o lex.o num.o obj.o output.o parse.o prim.o ptr.o range.o sdo.o stc.o str.o switch.o sym.o ../../src/libsiloh5.la -lreadline -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/browser array.o bif.o browser.o cons.o file.o func.o lex.o num.o obj.o output.o parse.o prim.o ptr.o range.o sdo.o stc.o str.o switch.o sym.o -L/usr/lib -Wl,--as-needed ../../src/.libs/libsiloh5.so -lreadline -lhdf5 -lm make[5]: Leaving directory `/«PKGBUILDDIR»/tools/browser' Making all in silock make[5]: Entering directory `/«PKGBUILDDIR»/tools/silock' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silock.c /bin/bash ../../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o silock silock.o ../../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/silock silock.o -L/usr/lib -Wl,--as-needed ../../src/.libs/libsiloh5.so -lhdf5 -lm make[5]: Leaving directory `/«PKGBUILDDIR»/tools/silock' Making all in python make[5]: Entering directory `/«PKGBUILDDIR»/tools/python' /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o pydbfile.lo pydbfile.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c pydbfile.cpp -fPIC -DPIC -o .libs/pydbfile.o pydbfile.cpp:622:31: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c pydbfile.cpp -o pydbfile.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o pydbtoc.lo pydbtoc.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c pydbtoc.cpp -fPIC -DPIC -o .libs/pydbtoc.o pydbtoc.cpp:305:30: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c pydbtoc.cpp -o pydbtoc.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o pysilo.lo pysilo.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c pysilo.cpp -fPIC -DPIC -o .libs/pysilo.o pysilo.cpp: In function 'void initSilo()': pysilo.cpp:236:68: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c pysilo.cpp -o pysilo.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -module -avoid-version -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o Silo.la -rpath /usr/lib/arm-linux-gnueabihf pydbfile.lo pydbtoc.lo pysilo.lo ../../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/4.6/crtbeginS.o .libs/pydbfile.o .libs/pydbtoc.o .libs/pysilo.o -Wl,-rpath -Wl,/«PKGBUILDDIR»/src/.libs -L/usr/lib -Wl,--as-needed ../../src/.libs/libsiloh5.so -lhdf5 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/4.6/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf/crtn.o -O2 -Wl,-z -Wl,relro -Wl,-soname -Wl,Silo.so -o .libs/Silo.so libtool: link: ar cru .libs/Silo.a pydbfile.o pydbtoc.o pysilo.o libtool: link: ranlib .libs/Silo.a libtool: link: ( cd ".libs" && rm -f "Silo.la" && ln -s "../Silo.la" "Silo.la" ) make[5]: Leaving directory `/«PKGBUILDDIR»/tools/python' Making all in silex make[5]: Entering directory `/«PKGBUILDDIR»/tools/silex' /usr/bin/moc -o Explorer_moc.cpp Explorer.h /usr/bin/moc -o SiloView_moc.cpp SiloView.h /usr/bin/moc -o SiloDirView_moc.cpp SiloDirView.h /usr/bin/moc -o SiloDirTreeView_moc.cpp SiloDirTreeView.h /usr/bin/moc -o SiloArrayView_moc.cpp SiloArrayView.h /usr/bin/moc -o SiloValueView_moc.cpp SiloValueView.h /usr/bin/moc -o SiloObjectView_moc.cpp SiloObjectView.h make all-am make[6]: Entering directory `/«PKGBUILDDIR»/tools/silex' g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o Explorer.o Explorer.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qmainwindow.h:45, from /usr/include/qt4/QtGui/QMainWindow:1, from Explorer.h:58, from Explorer.cpp:55: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o SiloView.o SiloView.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qframe.h:45, from /usr/include/qt4/QtGui/qsplitter.h:45, from /usr/include/qt4/QtGui/QSplitter:1, from SiloView.h:58, from SiloView.cpp:55: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o SiloDirView.o SiloDirView.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qframe.h:45, from /usr/include/qt4/QtGui/qabstractscrollarea.h:45, from /usr/include/qt4/QtGui/qabstractitemview.h:45, from /usr/include/qt4/QtGui/qtreeview.h:45, from /usr/include/qt4/QtGui/qtreewidget.h:45, from /usr/include/qt4/QtGui/QTreeWidget:1, from SiloDirView.h:58, from SiloDirView.cpp:55: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o SiloDirTreeView.o SiloDirTreeView.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qframe.h:45, from /usr/include/qt4/QtGui/qabstractscrollarea.h:45, from /usr/include/qt4/QtGui/qabstractitemview.h:45, from /usr/include/qt4/QtGui/qtreeview.h:45, from /usr/include/qt4/QtGui/qtreewidget.h:45, from /usr/include/qt4/QtGui/QTreeWidget:1, from SiloDirTreeView.h:58, from SiloDirTreeView.cpp:55: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o SiloArrayView.o SiloArrayView.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qmainwindow.h:45, from /usr/include/qt4/QtGui/QMainWindow:1, from SiloArrayView.h:58, from SiloArrayView.cpp:55: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o SiloValueView.o SiloValueView.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qmainwindow.h:45, from /usr/include/qt4/QtGui/QMainWindow:1, from SiloValueView.h:58, from SiloValueView.cpp:55: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o SiloObjectView.o SiloObjectView.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qframe.h:45, from /usr/include/qt4/QtGui/qabstractscrollarea.h:45, from /usr/include/qt4/QtGui/qabstractitemview.h:45, from /usr/include/qt4/QtGui/qtreeview.h:45, from /usr/include/qt4/QtGui/qtreewidget.h:45, from /usr/include/qt4/QtGui/QTreeWidget:1, from SiloObjectView.h:58, from SiloObjectView.cpp:55: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o SiloFile.o SiloFile.cpp In file included from /usr/include/qt4/QtCore/QString:1:0, from SiloFile.h:60, from SiloFile.cpp:55: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o main.o main.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtCore/qcoreapplication.h:45, from /usr/include/qt4/Qt/qapplication.h:45, from main.cpp:55: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o Explorer_moc.o Explorer_moc.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qmainwindow.h:45, from /usr/include/qt4/QtGui/QMainWindow:1, from Explorer.h:58, from Explorer_moc.cpp:10: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o SiloView_moc.o SiloView_moc.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qframe.h:45, from /usr/include/qt4/QtGui/qsplitter.h:45, from /usr/include/qt4/QtGui/QSplitter:1, from SiloView.h:58, from SiloView_moc.cpp:10: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o SiloDirView_moc.o SiloDirView_moc.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qframe.h:45, from /usr/include/qt4/QtGui/qabstractscrollarea.h:45, from /usr/include/qt4/QtGui/qabstractitemview.h:45, from /usr/include/qt4/QtGui/qtreeview.h:45, from /usr/include/qt4/QtGui/qtreewidget.h:45, from /usr/include/qt4/QtGui/QTreeWidget:1, from SiloDirView.h:58, from SiloDirView_moc.cpp:10: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o SiloDirTreeView_moc.o SiloDirTreeView_moc.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qframe.h:45, from /usr/include/qt4/QtGui/qabstractscrollarea.h:45, from /usr/include/qt4/QtGui/qabstractitemview.h:45, from /usr/include/qt4/QtGui/qtreeview.h:45, from /usr/include/qt4/QtGui/qtreewidget.h:45, from /usr/include/qt4/QtGui/QTreeWidget:1, from SiloDirTreeView.h:58, from SiloDirTreeView_moc.cpp:10: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o SiloArrayView_moc.o SiloArrayView_moc.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qmainwindow.h:45, from /usr/include/qt4/QtGui/QMainWindow:1, from SiloArrayView.h:58, from SiloArrayView_moc.cpp:10: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o SiloValueView_moc.o SiloValueView_moc.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qmainwindow.h:45, from /usr/include/qt4/QtGui/QMainWindow:1, from SiloValueView.h:58, from SiloValueView_moc.cpp:10: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o SiloObjectView_moc.o SiloObjectView_moc.cpp In file included from /usr/include/qt4/QtCore/qobject.h:48:0, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qframe.h:45, from /usr/include/qt4/QtGui/qabstractscrollarea.h:45, from /usr/include/qt4/QtGui/qabstractitemview.h:45, from /usr/include/qt4/QtGui/qtreeview.h:45, from /usr/include/qt4/QtGui/qtreewidget.h:45, from /usr/include/qt4/QtGui/QTreeWidget:1, from SiloObjectView.h:58, from SiloObjectView_moc.cpp:10: /usr/include/qt4/QtCore/qstring.h:174:17: note: the mangling of 'va_list' has changed in GCC 4.4 /bin/bash ../../libtool --tag=CXX --mode=link g++ -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o silex Explorer.o SiloView.o SiloDirView.o SiloDirTreeView.o SiloArrayView.o SiloValueView.o SiloObjectView.o SiloFile.o main.o Explorer_moc.o SiloView_moc.o SiloDirView_moc.o SiloDirTreeView_moc.o SiloArrayView_moc.o SiloValueView_moc.o SiloObjectView_moc.o ../../src/libsiloh5.la -L/usr/lib -lQtCore -lQtGui -lhdf5 -lm libtool: link: g++ -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/silex Explorer.o SiloView.o SiloDirView.o SiloDirTreeView.o SiloArrayView.o SiloValueView.o SiloObjectView.o SiloFile.o main.o Explorer_moc.o SiloView_moc.o SiloDirView_moc.o SiloDirTreeView_moc.o SiloArrayView_moc.o SiloValueView_moc.o SiloObjectView_moc.o -L/usr/lib -Wl,--as-needed ../../src/.libs/libsiloh5.so -lQtCore -lQtGui -lhdf5 -lm make[6]: Leaving directory `/«PKGBUILDDIR»/tools/silex' make[5]: Leaving directory `/«PKGBUILDDIR»/tools/silex' make[4]: Leaving directory `/«PKGBUILDDIR»/tools' Making all in tests make[4]: Entering directory `/«PKGBUILDDIR»/tests' NOTICE: Silo test cases are not compiled by default. To compile and test NOTICE: them run "make check" from the silo "tests" directory. Otherwise NOTICE: you can compile them individually with "make TESTNAME". The test NOTICE: names are: array, dir, extface, multi_test, partial_io, point, quad, NOTICE: simple, ucd, ucdsamp3, testall, obj, onehex, oneprism, onepyramid, NOTICE: onetet, subhex, TestReadMask, twohex, multispec, sami, specmix, NOTICE: spec, cpz1plt, spec, cpz1plt, group_test, listtypes, alltypes, wave, NOTICE: multi_file, polyzl, csg, rocket, mmadjacency, largefile, version, NOTICE: namescheme, efcentering, mk_nasf_pdb, ioperf, arbpoly2d, readstuff, NOTICE: compression, grab, arrayf77, curvef77, matf77, pointf77, quadf77, NOTICE: ucdf77, testallf77, but "testall" is a good one to start with. make[4]: Leaving directory `/«PKGBUILDDIR»/tests' make[3]: Leaving directory `/«PKGBUILDDIR»' make[2]: Leaving directory `/«PKGBUILDDIR»' set -e ; for p in `pyversions -s` ; do \ LDFLAGS=" -Wl,--as-needed -Wl,-z,relro" dh_auto_configure -- \ --enable-pythonmodule --enable-silex \ --with-qt=/usr --with-qt-bin=/usr/bin --with-qt-lib=/usr/lib \ --with-qt-include=/usr/include/qt4 \ --with-hdf5=/usr/include,/usr/lib PYTHON=$p CPPFLAGS=" -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2" CC=mpicc CFLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" ; \ /usr/bin/make -C tools/browser CXX=mpicc ; \ /usr/bin/make -C tools/python ; \ mkdir -p debian/tmp/usr/lib/pyshared/$p ; \ cp tools/python/.libs/Silo.so debian/Silo.so.$p ; \ done checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... gfortran checking whether the Fortran 77 compiler works... yes checking for Fortran 77 compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking what version the package is... 4.8 checking version script options... checking for site config host file... no checking for config-site arm-unknown-linux-gnueabihf... no checking for config-site arm-unknown-linux-gnueabihf... no checking for config-site unknown-linux-gnueabihf... no checking for config-site unknown-linux-gnueabihf... no checking for config-site arm-linux-gnueabihf... no checking for config-site arm-linux-gnueabihf... no checking for config-site arm-unknown... no checking for config-site linux-gnueabihf... no checking for config-site linux-gnueabihf... no checking for config-site unknown... no checking for config-site arm... no checking for config-site Linux... found checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for style of include used by make... GNU checking dependency style of g++... none checking for gcc... mpicc checking whether we are using the GNU C compiler... yes checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking dependency style of mpicc... none checking how to run the C preprocessor... mpicc -E checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking whether make sets $(MAKE)... (cached) yes checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 805306365 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... yes checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for library containing strerror... none required checking for hzip... hzip compression not available in BSD version checking for fpzip... fpzip compression not available in BSD version checking compiler optimization... disabled checking whether C compiler accepts "-D_LARGEFILE_SOURCE"... yes checking whether C compiler accepts "-D_LARGEFILE64_SOURCE"... yes checking whether C compiler accepts "-D_FILE_OFFSET_BITS=64"... yes checking whether C compiler accepts "-Wdeclaration-after-statement"... yes checking size of off64_t... 8 checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking for sys/stat.h... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking sys/fcntl.h usability... yes checking sys/fcntl.h presence... yes checking for sys/fcntl.h... yes checking fnmatch.h usability... yes checking fnmatch.h presence... yes checking for fnmatch.h... yes checking ieeefp.h usability... no checking ieeefp.h presence... no checking for ieeefp.h... no checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for ANSI C header files... (cached) yes checking for fclose function pointer... yes checking for fflush function pointer... yes checking for fopen function pointer... yes checking for fprintf function pointer... yes checking for fread function pointer... yes checking for fseek function pointer... yes checking for setvbuf function pointer... yes checking for ftell function pointer... yes checking for fwrite function pointer... yes checking for memmove... yes checking for fnmatch... yes checking for isnan... yes checking for fpclass... no checking for strerror... yes checking if setjmp and longjmp work... yes checking for cos in -lm... yes checking for szlib... suppressed checking for hdf5... configure: checking for hdf5 and supporting libraries... checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for H5open... yes checking for a readline compatible library... -lreadline checking readline.h usability... no checking readline.h presence... no checking for readline.h... no checking readline/readline.h usability... yes checking readline/readline.h presence... yes checking for readline/readline.h... yes checking whether readline supports history... yes checking history.h usability... no checking history.h presence... no checking for history.h... no checking readline/history.h usability... yes checking readline/history.h presence... yes checking for readline/history.h... yes checking for supported Qt version... Qt in Qt 4.8.1 in /usr/include/qt4 checking whether python2.6 version >= 2.1... yes checking for python2.6 version... 2.6 checking for python2.6 platform... linux2 checking for python2.6 script directory... ${prefix}/lib/python2.6/dist-packages checking for python2.6 extension module directory... ${exec_prefix}/lib/python2.6/dist-packages checking for Python include path... -I/usr/include/python2.6 configure: creating ./config.status config.status: creating Makefile config.status: creating SiloWindows/Makefile config.status: creating svn_bin/Makefile config.status: creating config/Makefile config.status: creating config-site/Makefile config.status: creating docs/Makefile config.status: creating src/Makefile config.status: creating src/score/Makefile config.status: creating src/pdb/Makefile config.status: creating src/silo/Makefile config.status: creating src/silo/silo.h config.status: creating src/debug/Makefile config.status: creating src/netcdf/Makefile config.status: creating src/pdb_drv/Makefile config.status: creating src/pdbp_drv/Makefile config.status: creating src/hdf5_drv/Makefile config.status: creating src/taurus/Makefile config.status: creating src/unknown/Makefile config.status: creating src/filters/Makefile config.status: creating tests/Makefile config.status: creating tools/Makefile config.status: creating tools/browser/Makefile config.status: creating tools/python/Makefile config.status: creating tools/silex/Makefile config.status: creating tools/silock/Makefile config.status: creating silo.pc config.status: creating src/libsiloh5.settings config.status: creating config.h config.status: config.h is unchanged config.status: executing tests/atconfig commands config.status: executing depfiles commands config.status: executing libtool commands SUMMARY OF THE Silo with HDF5 CONFIGURATION ================================= Silo Version: 4.8 Configured on: Mon Jun 25 11:05:53 UTC 2012 Configured by: buildd@build04.raspbian.lan Configure command: ./configure '--build=arm-linux-gnueabihf' '--prefix=/usr' '--includedir=${prefix}/include' '--mandir=${prefix}/share/man' '--infodir=${prefix}/share/info' '--sysconfdir=/etc' '--localstatedir=/var' '--libdir=${prefix}/lib/arm-linux-gnueabihf' '--libexecdir=${prefix}/lib/arm-linux-gnueabihf' '--disable-maintainer-mode' '--disable-dependency-tracking' '--enable-pythonmodule' '--enable-silex' '--with-qt=/usr' '--with-qt-bin=/usr/bin' '--with-qt-lib=/usr/lib' '--with-qt-include=/usr/include/qt4' '--with-hdf5=/usr/include,/usr/lib' 'PYTHON=python2.6' 'CPPFLAGS= -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2' 'CC=mpicc' 'CFLAGS=-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security' 'build_alias=arm-linux-gnueabihf' 'FFLAGS=-g -O2' 'LDFLAGS= -Wl,--as-needed -Wl,-z,relro' 'CXXFLAGS=-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security' Host system: arm-unknown-linux-gnueabihf Build system: arm-unknown-linux-gnueabihf Installation point: /usr Source directory: @UsingSrcDir@ Archiver: ar Ranlib: ranlib Configure Summary Compiling Options: C Compiler /usr/bin/mpicc CPPFLAGS -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 CFLAGS -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement LDFLAGS -L/usr/lib -Wl,--as-needed -Wl,-z,relro LIBS -lhdf5 -lm Languages: C++ Compiler /usr/bin/g++ CXXFLAGS -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security Fortran Compiler /usr/bin/gfortran FCFLAGS -g -O2 FCLIBS -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm Features: Browser @UsingBrowser@ Readline @UsingReadline@ HDF5 @UsingHDF5@ Silex @UsingSilex@ Qt @UsingQt@ Qt moc Compiler $(QT_BIN)/moc Qt CXXFLAGS -I$(QT_INCLUDE) -I$(QT_INCLUDE)/Qt -I$(QT_INCLUDE)/QtCore -I$(QT_INCLUDE)/QtGui Qt LIBS $(QT_CORE_LIB) $(QT_GUI_LIB) Python @UsingPython@ Python Compiler python2.6 Python CPPFLAGS -I/usr/include/python2.6 make[2]: Entering directory `/«PKGBUILDDIR»/tools/browser' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/«PKGBUILDDIR»/tools/browser' make[2]: Entering directory `/«PKGBUILDDIR»/tools/python' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/«PKGBUILDDIR»/tools/python' checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... gfortran checking whether the Fortran 77 compiler works... yes checking for Fortran 77 compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking what version the package is... 4.8 checking version script options... checking for site config host file... no checking for config-site arm-unknown-linux-gnueabihf... no checking for config-site arm-unknown-linux-gnueabihf... no checking for config-site unknown-linux-gnueabihf... no checking for config-site unknown-linux-gnueabihf... no checking for config-site arm-linux-gnueabihf... no checking for config-site arm-linux-gnueabihf... no checking for config-site arm-unknown... no checking for config-site linux-gnueabihf... no checking for config-site linux-gnueabihf... no checking for config-site unknown... no checking for config-site arm... no checking for config-site Linux... found checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for style of include used by make... GNU checking dependency style of g++... none checking for gcc... mpicc checking whether we are using the GNU C compiler... yes checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking dependency style of mpicc... none checking how to run the C preprocessor... mpicc -E checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking whether make sets $(MAKE)... (cached) yes checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 805306365 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... yes checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for library containing strerror... none required checking for hzip... hzip compression not available in BSD version checking for fpzip... fpzip compression not available in BSD version checking compiler optimization... disabled checking whether C compiler accepts "-D_LARGEFILE_SOURCE"... yes checking whether C compiler accepts "-D_LARGEFILE64_SOURCE"... yes checking whether C compiler accepts "-D_FILE_OFFSET_BITS=64"... yes checking whether C compiler accepts "-Wdeclaration-after-statement"... yes checking size of off64_t... 8 checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking for sys/stat.h... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking sys/fcntl.h usability... yes checking sys/fcntl.h presence... yes checking for sys/fcntl.h... yes checking fnmatch.h usability... yes checking fnmatch.h presence... yes checking for fnmatch.h... yes checking ieeefp.h usability... no checking ieeefp.h presence... no checking for ieeefp.h... no checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for ANSI C header files... (cached) yes checking for fclose function pointer... yes checking for fflush function pointer... yes checking for fopen function pointer... yes checking for fprintf function pointer... yes checking for fread function pointer... yes checking for fseek function pointer... yes checking for setvbuf function pointer... yes checking for ftell function pointer... yes checking for fwrite function pointer... yes checking for memmove... yes checking for fnmatch... yes checking for isnan... yes checking for fpclass... no checking for strerror... yes checking if setjmp and longjmp work... yes checking for cos in -lm... yes checking for szlib... suppressed checking for hdf5... configure: checking for hdf5 and supporting libraries... checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for H5open... yes checking for a readline compatible library... -lreadline checking readline.h usability... no checking readline.h presence... no checking for readline.h... no checking readline/readline.h usability... yes checking readline/readline.h presence... yes checking for readline/readline.h... yes checking whether readline supports history... yes checking history.h usability... no checking history.h presence... no checking for history.h... no checking readline/history.h usability... yes checking readline/history.h presence... yes checking for readline/history.h... yes checking for supported Qt version... Qt in Qt 4.8.1 in /usr/include/qt4 checking whether python2.7 version >= 2.1... yes checking for python2.7 version... 2.7 checking for python2.7 platform... linux2 checking for python2.7 script directory... ${prefix}/lib/python2.7/dist-packages checking for python2.7 extension module directory... ${exec_prefix}/lib/python2.7/dist-packages checking for Python include path... -I/usr/include/python2.7 configure: creating ./config.status config.status: creating Makefile config.status: creating SiloWindows/Makefile config.status: creating svn_bin/Makefile config.status: creating config/Makefile config.status: creating config-site/Makefile config.status: creating docs/Makefile config.status: creating src/Makefile config.status: creating src/score/Makefile config.status: creating src/pdb/Makefile config.status: creating src/silo/Makefile config.status: creating src/silo/silo.h config.status: creating src/debug/Makefile config.status: creating src/netcdf/Makefile config.status: creating src/pdb_drv/Makefile config.status: creating src/pdbp_drv/Makefile config.status: creating src/hdf5_drv/Makefile config.status: creating src/taurus/Makefile config.status: creating src/unknown/Makefile config.status: creating src/filters/Makefile config.status: creating tests/Makefile config.status: creating tools/Makefile config.status: creating tools/browser/Makefile config.status: creating tools/python/Makefile config.status: creating tools/silex/Makefile config.status: creating tools/silock/Makefile config.status: creating silo.pc config.status: creating src/libsiloh5.settings config.status: creating config.h config.status: config.h is unchanged config.status: executing tests/atconfig commands config.status: executing depfiles commands config.status: executing libtool commands SUMMARY OF THE Silo with HDF5 CONFIGURATION ================================= Silo Version: 4.8 Configured on: Mon Jun 25 11:06:51 UTC 2012 Configured by: buildd@build04.raspbian.lan Configure command: ./configure '--build=arm-linux-gnueabihf' '--prefix=/usr' '--includedir=${prefix}/include' '--mandir=${prefix}/share/man' '--infodir=${prefix}/share/info' '--sysconfdir=/etc' '--localstatedir=/var' '--libdir=${prefix}/lib/arm-linux-gnueabihf' '--libexecdir=${prefix}/lib/arm-linux-gnueabihf' '--disable-maintainer-mode' '--disable-dependency-tracking' '--enable-pythonmodule' '--enable-silex' '--with-qt=/usr' '--with-qt-bin=/usr/bin' '--with-qt-lib=/usr/lib' '--with-qt-include=/usr/include/qt4' '--with-hdf5=/usr/include,/usr/lib' 'PYTHON=python2.7' 'CPPFLAGS= -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2' 'CC=mpicc' 'CFLAGS=-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security' 'build_alias=arm-linux-gnueabihf' 'FFLAGS=-g -O2' 'LDFLAGS= -Wl,--as-needed -Wl,-z,relro' 'CXXFLAGS=-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security' Host system: arm-unknown-linux-gnueabihf Build system: arm-unknown-linux-gnueabihf Installation point: /usr Source directory: @UsingSrcDir@ Archiver: ar Ranlib: ranlib Configure Summary Compiling Options: C Compiler /usr/bin/mpicc CPPFLAGS -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 CFLAGS -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement LDFLAGS -L/usr/lib -Wl,--as-needed -Wl,-z,relro LIBS -lhdf5 -lm Languages: C++ Compiler /usr/bin/g++ CXXFLAGS -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security Fortran Compiler /usr/bin/gfortran FCFLAGS -g -O2 FCLIBS -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm Features: Browser @UsingBrowser@ Readline @UsingReadline@ HDF5 @UsingHDF5@ Silex @UsingSilex@ Qt @UsingQt@ Qt moc Compiler $(QT_BIN)/moc Qt CXXFLAGS -I$(QT_INCLUDE) -I$(QT_INCLUDE)/Qt -I$(QT_INCLUDE)/QtCore -I$(QT_INCLUDE)/QtGui Qt LIBS $(QT_CORE_LIB) $(QT_GUI_LIB) Python @UsingPython@ Python Compiler python2.7 Python CPPFLAGS -I/usr/include/python2.7 make[2]: Entering directory `/«PKGBUILDDIR»/tools/browser' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/«PKGBUILDDIR»/tools/browser' make[2]: Entering directory `/«PKGBUILDDIR»/tools/python' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/«PKGBUILDDIR»/tools/python' make[1]: Leaving directory `/«PKGBUILDDIR»' dh_auto_test -a make[1]: Entering directory `/«PKGBUILDDIR»' Making check in . make[2]: Entering directory `/«PKGBUILDDIR»' make[2]: Leaving directory `/«PKGBUILDDIR»' Making check in src make[2]: Entering directory `/«PKGBUILDDIR»/src' make check-recursive make[3]: Entering directory `/«PKGBUILDDIR»/src' Making check in score make[4]: Entering directory `/«PKGBUILDDIR»/src/score' make[4]: Nothing to be done for `check'. make[4]: Leaving directory `/«PKGBUILDDIR»/src/score' Making check in pdb make[4]: Entering directory `/«PKGBUILDDIR»/src/pdb' make check-am make[5]: Entering directory `/«PKGBUILDDIR»/src/pdb' make[5]: Nothing to be done for `check-am'. make[5]: Leaving directory `/«PKGBUILDDIR»/src/pdb' make[4]: Leaving directory `/«PKGBUILDDIR»/src/pdb' Making check in silo make[4]: Entering directory `/«PKGBUILDDIR»/src/silo' make check-am make[5]: Entering directory `/«PKGBUILDDIR»/src/silo' make[5]: Nothing to be done for `check-am'. make[5]: Leaving directory `/«PKGBUILDDIR»/src/silo' make[4]: Leaving directory `/«PKGBUILDDIR»/src/silo' Making check in debug make[4]: Entering directory `/«PKGBUILDDIR»/src/debug' make[4]: Nothing to be done for `check'. make[4]: Leaving directory `/«PKGBUILDDIR»/src/debug' Making check in netcdf make[4]: Entering directory `/«PKGBUILDDIR»/src/netcdf' make[4]: Nothing to be done for `check'. make[4]: Leaving directory `/«PKGBUILDDIR»/src/netcdf' Making check in pdb_drv make[4]: Entering directory `/«PKGBUILDDIR»/src/pdb_drv' make[4]: Nothing to be done for `check'. make[4]: Leaving directory `/«PKGBUILDDIR»/src/pdb_drv' Making check in hdf5_drv make[4]: Entering directory `/«PKGBUILDDIR»/src/hdf5_drv' make[4]: Nothing to be done for `check'. make[4]: Leaving directory `/«PKGBUILDDIR»/src/hdf5_drv' Making check in taurus make[4]: Entering directory `/«PKGBUILDDIR»/src/taurus' make[4]: Nothing to be done for `check'. make[4]: Leaving directory `/«PKGBUILDDIR»/src/taurus' Making check in unknown make[4]: Entering directory `/«PKGBUILDDIR»/src/unknown' make[4]: Nothing to be done for `check'. make[4]: Leaving directory `/«PKGBUILDDIR»/src/unknown' Making check in filters make[4]: Entering directory `/«PKGBUILDDIR»/src/filters' make[4]: Nothing to be done for `check'. make[4]: Leaving directory `/«PKGBUILDDIR»/src/filters' Making check in . make[4]: Entering directory `/«PKGBUILDDIR»/src' make[4]: Nothing to be done for `check-am'. make[4]: Leaving directory `/«PKGBUILDDIR»/src' make[3]: Leaving directory `/«PKGBUILDDIR»/src' make[2]: Leaving directory `/«PKGBUILDDIR»/src' Making check in tools make[2]: Entering directory `/«PKGBUILDDIR»/tools' Making check in . make[3]: Entering directory `/«PKGBUILDDIR»/tools' make[3]: Nothing to be done for `check-am'. make[3]: Leaving directory `/«PKGBUILDDIR»/tools' Making check in browser make[3]: Entering directory `/«PKGBUILDDIR»/tools/browser' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/«PKGBUILDDIR»/tools/browser' Making check in silock make[3]: Entering directory `/«PKGBUILDDIR»/tools/silock' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/«PKGBUILDDIR»/tools/silock' Making check in python make[3]: Entering directory `/«PKGBUILDDIR»/tools/python' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/«PKGBUILDDIR»/tools/python' Making check in silex make[3]: Entering directory `/«PKGBUILDDIR»/tools/silex' make check-am make[4]: Entering directory `/«PKGBUILDDIR»/tools/silex' make[4]: Nothing to be done for `check-am'. make[4]: Leaving directory `/«PKGBUILDDIR»/tools/silex' make[3]: Leaving directory `/«PKGBUILDDIR»/tools/silex' make[2]: Leaving directory `/«PKGBUILDDIR»/tools' Making check in tests make[2]: Entering directory `/«PKGBUILDDIR»/tests' NOTICE: Silo test cases are not compiled by default. To compile and test NOTICE: them run "make check" from the silo "tests" directory. Otherwise NOTICE: you can compile them individually with "make TESTNAME". The test NOTICE: names are: array, dir, extface, multi_test, partial_io, point, quad, NOTICE: simple, ucd, ucdsamp3, testall, obj, onehex, oneprism, onepyramid, NOTICE: onetet, subhex, TestReadMask, twohex, multispec, sami, specmix, NOTICE: spec, cpz1plt, spec, cpz1plt, group_test, listtypes, alltypes, wave, NOTICE: multi_file, polyzl, csg, rocket, mmadjacency, largefile, version, NOTICE: namescheme, efcentering, mk_nasf_pdb, ioperf, arbpoly2d, readstuff, NOTICE: compression, grab, arrayf77, curvef77, matf77, pointf77, quadf77, NOTICE: ucdf77, testallf77, but "testall" is a good one to start with. make arbpoly2d array extface multi_test partial_io point group_test listtypes simple ucd ucdsamp3 testall alltypes obj onehex oneprism onepyramid onetet TestReadMask subhex twohex multispec specmix testpdb sami spec cpz1plt merge_block mat3d_3across ucd1d wave multi_file polyzl csg rocket mmadjacency largefile dir quad version namescheme efcentering mk_nasf_pdb ioperf readstuff compression grab arrayf77 curvef77 matf77 pointf77 quadf77 ucdf77 testallf77 checksums testhzip testxvers test_error.py test_read.py test_write.py testsilock testdtypes \ xvers_data.tar.bz2 pion0244.silo make[3]: Entering directory `/«PKGBUILDDIR»/tests' mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c arbpoly2d.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o arbpoly2d arbpoly2d.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/arbpoly2d arbpoly2d.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c array.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o array array.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/array array.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c extface.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o extface extface.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/extface extface.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c multi_test.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o multi_test multi_test.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/multi_test multi_test.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c partial_io.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o partial_io partial_io.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/partial_io partial_io.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c point.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o point point.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/point point.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c group_test.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o group_test group_test.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/group_test group_test.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c listtypes.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o listtypes listtypes.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/listtypes listtypes.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c simple.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o simple simple.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/simple simple.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c ucd.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o ucd ucd.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/ucd ucd.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c ucdsamp3.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o ucdsamp3 ucdsamp3.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/ucdsamp3 ucdsamp3.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c testall.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o testall testall.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/testall testall.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c alltypes.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o alltypes alltypes.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/alltypes alltypes.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE 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-I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c csg.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o csg csg.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/csg csg.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm g++ -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -c -o rocket.o rocket.cpp rocket.cpp:280:2: warning: #warning NEED TO IMPLEMENT .. SETTING [-Wcpp] rocket.cpp:118:70: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:118:70: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:118:70: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:118:70: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:118:70: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:188:57: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp: In function 'void write_a_block(const std::vector&, int, siloimesh_t, const char*)': rocket.cpp:816:21: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:825:21: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:826:21: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:827:21: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp: In function 'void write_rocket(siloimesh_t)': rocket.cpp:1126:21: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:1127:21: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:1128:21: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:1148:23: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:1156:23: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:1164:23: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp: In function 'void write_mrocket(siloimesh_t)': rocket.cpp:1273:23: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:1274:23: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:1275:23: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:1277:20: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:1278:20: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:1279:20: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:1281:21: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:1282:21: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:1283:21: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp:1288:21: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] rocket.cpp: In function 'void write_top_mrgtree(siloimesh_t)': rocket.cpp:1395:22: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o rocket rocket.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/rocket rocket.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c mmadjacency.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o mmadjacency mmadjacency.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/mmadjacency mmadjacency.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c largefile.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o largefile largefile.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/largefile largefile.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c dir.c mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c testlib.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o dir dir.o testlib.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/dir dir.o testlib.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o quad-quad.o `test -f 'quad.c' || echo './'`quad.c mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o quad-testlib.o `test -f 'testlib.c' || echo './'`testlib.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o quad quad-quad.o quad-testlib.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/quad quad-quad.o quad-testlib.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c version.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o version version.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/version version.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c namescheme.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o namescheme namescheme.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/namescheme namescheme.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c efcentering.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o efcentering efcentering.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/efcentering efcentering.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c mk_nasf_pdb.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o mk_nasf_pdb mk_nasf_pdb.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/mk_nasf_pdb mk_nasf_pdb.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c ioperf.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o ioperf ioperf.o -ldl -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o ioperf ioperf.o -L/usr/lib -Wl,--as-needed -ldl -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c readstuff.c readstuff.c: In function 'main': readstuff.c:115:5: warning: passing argument 3 of 'DBSortObjectsByOffset' from incompatible pointer type [enabled by default] ./../src/silo/silo.h:1869:26: note: expected 'const char * const* const' but argument is of type 'char **' /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o readstuff readstuff.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/readstuff readstuff.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c compression.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o compression compression.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/compression compression.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm mpicc -DHAVE_CONFIG_H -I. -I.. -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -I/usr/lib/openmpi/include -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c grab.c /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o grab grab.o ../src/libsiloh5.la -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/grab grab.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -lhdf5 -lm gfortran -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -g -O2 -c -o arrayf77.o arrayf77.f /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o arrayf77 arrayf77.o ../src/libsiloh5.la -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/arrayf77 arrayf77.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lhdf5 -lm gfortran -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -g -O2 -c -o curvef77.o curvef77.f /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o curvef77 curvef77.o ../src/libsiloh5.la -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/curvef77 curvef77.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lhdf5 -lm gfortran -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -g -O2 -c -o matf77.o matf77.f /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o matf77 matf77.o ../src/libsiloh5.la -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/matf77 matf77.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lhdf5 -lm gfortran -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -g -O2 -c -o pointf77.o pointf77.f /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o pointf77 pointf77.o ../src/libsiloh5.la -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/pointf77 pointf77.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lhdf5 -lm gfortran -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -g -O2 -c -o quadf77.o quadf77.f /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o quadf77 quadf77.o ../src/libsiloh5.la -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/quadf77 quadf77.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lhdf5 -lm gfortran -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -g -O2 -c -o ucdf77.o ucdf77.f /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o ucdf77 ucdf77.o ../src/libsiloh5.la -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/ucdf77 ucdf77.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lhdf5 -lm gfortran -I./../src/pdb -I./../src/score -I./../src/silo -I./../src/silo -I/usr/include -g -O2 -c -o testallf77.o testallf77.f /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -L/usr/lib -Wl,--as-needed -Wl,-z,relro -o testallf77 testallf77.o ../src/libsiloh5.la -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm -lhdf5 -lm libtool: link: g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/testallf77 testallf77.o -L/usr/lib -Wl,--as-needed ../src/.libs/libsiloh5.so -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lhdf5 -lm touch copy_cksd make[3]: Nothing to be done for `testhzip'. make[3]: Nothing to be done for `testxvers'. make[3]: Nothing to be done for `test_error.py'. make[3]: Nothing to be done for `test_read.py'. make[3]: Nothing to be done for `test_write.py'. make[3]: Nothing to be done for `testsilock'. make[3]: Nothing to be done for `testdtypes'. make[3]: Nothing to be done for `xvers_data.tar.bz2'. make[3]: Nothing to be done for `pion0244.silo'. make[3]: Leaving directory `/«PKGBUILDDIR»/tests' make check-local make[3]: Entering directory `/«PKGBUILDDIR»/tests' /bin/bash ./testsuite PYTHON="python2.7" BROWSER="browser" STARGS="" ## ------------------------------------------- ## ## silo 4.8 test suite: VALGRIND="" STARGS="". ## ## ------------------------------------------- ## Non-driver-specific 1: version ok 2: namescheme ok 3: point ok 4: extface ok 5: testall -small ok 6: TestReadMask ok 7: array ok 8: multi_test ok 9: multi_test earlyclose ok 10: partial_io ok 11: simple ok 12: ucd ok 13: ucdsamp3 ok 14: testall -small -fortran ok 15: obj ok 16: onehex ok 17: oneprism ok 18: onepyramid ok 19: onetet ok 20: subhex ok 21: twohex ok 22: multispec ok 23: sami ok 24: specmix ok 25: spec ok 26: group_test ok 27: listtypes ok 28: alltypes ok 29: wave ok 30: polyzl ok 31: csg ok 32: rocket ok 33: mmadjacency ok 34: mat3d_3across ok 35: ucd1d ok 36: dir ok 37: quad ok 38: arbpoly2d ok 39: readstuff ok pythonmodule 40: read ok 41: write ok 42: error handling ok PDB Specific 43: testpdb ok HDF5 Specific 44: grab skipped (testsuite.at:240) 45: compression gzip skipped (testsuite.at:244) 46: compression szip skipped (testsuite.at:249) 47: compression fpzip skipped (testsuite.at:254) 48: compression lossy3 skipped (testsuite.at:259) 49: compression minratio1000 skipped (testsuite.at:264) 50: testhzip skipped (testsuite.at:268) 51: checksums skipped (testsuite.at:271) 52: xversion skipped (testsuite.at:274) 53: largefile skipped (testsuite.at:278) Fortran 54: arrayf77 ok 55: curvef77 ok 56: matf77 ok 57: pointf77 ok 58: quadf77 ok 59: testallf77 ok 60: ucdf77 ok Special 61: silock ok 62: force single ok 63: multi_file ok 64: testall -medium ok 65: testall -large ok ## ------------- ## ## Test results. ## ## ------------- ## 55 tests were successful. 10 tests were skipped. ## -------------------------------------------------- ## ## silo 4.8 test suite: VALGRIND="" STARGS="DB_HDF5". ## ## -------------------------------------------------- ## Non-driver-specific 1: version ok 2: namescheme ok 3: point ok 4: extface ok 5: testall -small ok 6: TestReadMask ok 7: array ok 8: multi_test ok 9: multi_test earlyclose ok 10: partial_io ok 11: simple ok 12: ucd ok 13: ucdsamp3 ok 14: testall -small -fortran ok 15: obj ok 16: onehex ok 17: oneprism ok 18: onepyramid ok 19: onetet ok 20: subhex ok 21: twohex ok 22: multispec ok 23: sami ok 24: specmix ok 25: spec ok 26: group_test ok 27: listtypes ok 28: alltypes ok 29: wave ok 30: polyzl ok 31: csg ok 32: rocket ok 33: mmadjacency ok 34: mat3d_3across ok 35: ucd1d ok 36: dir ok 37: quad ok 38: arbpoly2d ok 39: readstuff ok pythonmodule 40: read ok 41: write ok 42: error handling ok PDB Specific 43: testpdb skipped (testsuite.at:235) HDF5 Specific 44: grab ok 45: compression gzip ok 46: compression szip FAILED (testsuite.at:249) 47: compression fpzip skipped (testsuite.at:254) 48: compression lossy3 skipped (testsuite.at:259) 49: compression minratio1000 skipped (testsuite.at:264) 50: testhzip skipped (testsuite.at:268) 51: checksums ok 52: xversion ok 53: largefile ok Fortran 54: arrayf77 ok 55: curvef77 ok 56: matf77 ok 57: pointf77 ok 58: quadf77 ok 59: testallf77 ok 60: ucdf77 ok Special 61: silock ok 62: force single ok 63: multi_file ok 64: testall -medium ok 65: testall -large ok ## ------------- ## ## Test results. ## ## ------------- ## ERROR: 60 tests were run, 1 failed unexpectedly. 5 tests were skipped. ## -------------------------- ## ## testsuite.log was created. ## ## -------------------------- ## Please send `tests/testsuite.log' and all information you think might help: To: Subject: [silo 4.8] testsuite: 46 failed You may investigate any problem if you feel able to do so, in which case the test suite provides a good starting point. Its output may be found below `tests/testsuite.dir'. make[3]: Leaving directory `/«PKGBUILDDIR»/tests' make[2]: Leaving directory `/«PKGBUILDDIR»/tests' make[1]: Leaving directory `/«PKGBUILDDIR»' fakeroot debian/rules binary-arch dh binary-arch --with python2,autoreconf dh_testroot -a dh_prep -a dh_installdirs -a debian/rules override_dh_auto_install make[1]: Entering directory `/«PKGBUILDDIR»' dh_auto_install make[2]: Entering directory `/«PKGBUILDDIR»' Making install in . make[3]: Entering directory `/«PKGBUILDDIR»' make[4]: Entering directory `/«PKGBUILDDIR»' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/«PKGBUILDDIR»' make[3]: Leaving directory `/«PKGBUILDDIR»' Making install in src make[3]: Entering directory `/«PKGBUILDDIR»/src' make install-recursive make[4]: Entering directory `/«PKGBUILDDIR»/src' Making install in score make[5]: Entering directory `/«PKGBUILDDIR»/src/score' make[6]: Entering directory `/«PKGBUILDDIR»/src/score' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/«PKGBUILDDIR»/src/score' make[5]: Leaving directory `/«PKGBUILDDIR»/src/score' Making install in pdb make[5]: Entering directory `/«PKGBUILDDIR»/src/pdb' make install-am make[6]: Entering directory `/«PKGBUILDDIR»/src/pdb' make[7]: Entering directory `/«PKGBUILDDIR»/src/pdb' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/«PKGBUILDDIR»/src/pdb' make[6]: Leaving directory `/«PKGBUILDDIR»/src/pdb' make[5]: Leaving directory `/«PKGBUILDDIR»/src/pdb' Making install in silo make[5]: Entering directory `/«PKGBUILDDIR»/src/silo' make install-am make[6]: Entering directory `/«PKGBUILDDIR»/src/silo' make[7]: Entering directory `/«PKGBUILDDIR»/src/silo' make[7]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/include' /usr/bin/install -c -m 644 silo.inc pmpio.h '/«PKGBUILDDIR»/debian/tmp/usr/include' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/include' /usr/bin/install -c -m 644 silo.h '/«PKGBUILDDIR»/debian/tmp/usr/include' make[7]: Leaving directory `/«PKGBUILDDIR»/src/silo' make[6]: Leaving directory `/«PKGBUILDDIR»/src/silo' make[5]: Leaving directory `/«PKGBUILDDIR»/src/silo' Making install in debug make[5]: Entering directory `/«PKGBUILDDIR»/src/debug' make[6]: Entering directory `/«PKGBUILDDIR»/src/debug' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/«PKGBUILDDIR»/src/debug' make[5]: Leaving directory `/«PKGBUILDDIR»/src/debug' Making install in netcdf make[5]: Entering directory `/«PKGBUILDDIR»/src/netcdf' make[6]: Entering directory `/«PKGBUILDDIR»/src/netcdf' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/«PKGBUILDDIR»/src/netcdf' make[5]: Leaving directory `/«PKGBUILDDIR»/src/netcdf' Making install in pdb_drv make[5]: Entering directory `/«PKGBUILDDIR»/src/pdb_drv' make[6]: Entering directory `/«PKGBUILDDIR»/src/pdb_drv' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/«PKGBUILDDIR»/src/pdb_drv' make[5]: Leaving directory `/«PKGBUILDDIR»/src/pdb_drv' Making install in hdf5_drv make[5]: Entering directory `/«PKGBUILDDIR»/src/hdf5_drv' make[6]: Entering directory `/«PKGBUILDDIR»/src/hdf5_drv' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/«PKGBUILDDIR»/src/hdf5_drv' make[5]: Leaving directory `/«PKGBUILDDIR»/src/hdf5_drv' Making install in taurus make[5]: Entering directory `/«PKGBUILDDIR»/src/taurus' make[6]: Entering directory `/«PKGBUILDDIR»/src/taurus' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/«PKGBUILDDIR»/src/taurus' make[5]: Leaving directory `/«PKGBUILDDIR»/src/taurus' Making install in unknown make[5]: Entering directory `/«PKGBUILDDIR»/src/unknown' make[6]: Entering directory `/«PKGBUILDDIR»/src/unknown' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/«PKGBUILDDIR»/src/unknown' make[5]: Leaving directory `/«PKGBUILDDIR»/src/unknown' Making install in filters make[5]: Entering directory `/«PKGBUILDDIR»/src/filters' make[6]: Entering directory `/«PKGBUILDDIR»/src/filters' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/«PKGBUILDDIR»/src/filters' make[5]: Leaving directory `/«PKGBUILDDIR»/src/filters' Making install in . make[5]: Entering directory `/«PKGBUILDDIR»/src' make[6]: Entering directory `/«PKGBUILDDIR»/src' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/bash ../libtool --mode=install /usr/bin/install -c libsiloh5.la '/«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/libsiloh5.so.0.0.0 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libsiloh5.so.0.0.0 libtool: install: (cd /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libsiloh5.so.0.0.0 libsiloh5.so.0 || { rm -f libsiloh5.so.0 && ln -s libsiloh5.so.0.0.0 libsiloh5.so.0; }; }) libtool: install: (cd /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libsiloh5.so.0.0.0 libsiloh5.so || { rm -f libsiloh5.so && ln -s libsiloh5.so.0.0.0 libsiloh5.so; }; }) libtool: install: /usr/bin/install -c .libs/libsiloh5.lai /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libsiloh5.la libtool: install: /usr/bin/install -c .libs/libsiloh5.a /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libsiloh5.a libtool: install: chmod 644 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libsiloh5.a libtool: install: ranlib /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libsiloh5.a libtool: install: warning: remember to run `libtool --finish /usr/lib/arm-linux-gnueabihf' make[6]: Leaving directory `/«PKGBUILDDIR»/src' make[5]: Leaving directory `/«PKGBUILDDIR»/src' make[4]: Leaving directory `/«PKGBUILDDIR»/src' make[3]: Leaving directory `/«PKGBUILDDIR»/src' Making install in tools make[3]: Entering directory `/«PKGBUILDDIR»/tools' Making install in . make[4]: Entering directory `/«PKGBUILDDIR»/tools' make[5]: Entering directory `/«PKGBUILDDIR»/tools' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/«PKGBUILDDIR»/tools' make[4]: Leaving directory `/«PKGBUILDDIR»/tools' Making install in browser make[4]: Entering directory `/«PKGBUILDDIR»/tools/browser' make[5]: Entering directory `/«PKGBUILDDIR»/tools/browser' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c browser '/«PKGBUILDDIR»/debian/tmp/usr/bin' libtool: install: warning: `../../src/libsiloh5.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/browser /«PKGBUILDDIR»/debian/tmp/usr/bin/browser /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/bin' /usr/bin/install -c silodiff silofile '/«PKGBUILDDIR»/debian/tmp/usr/bin' make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/«PKGBUILDDIR»/tools/browser' make[4]: Leaving directory `/«PKGBUILDDIR»/tools/browser' Making install in silock make[4]: Entering directory `/«PKGBUILDDIR»/tools/silock' make[5]: Entering directory `/«PKGBUILDDIR»/tools/silock' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c silock '/«PKGBUILDDIR»/debian/tmp/usr/bin' libtool: install: warning: `../../src/libsiloh5.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/silock /«PKGBUILDDIR»/debian/tmp/usr/bin/silock make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/«PKGBUILDDIR»/tools/silock' make[4]: Leaving directory `/«PKGBUILDDIR»/tools/silock' Making install in python make[4]: Entering directory `/«PKGBUILDDIR»/tools/python' make[5]: Entering directory `/«PKGBUILDDIR»/tools/python' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/bash ../../libtool --mode=install /usr/bin/install -c Silo.la '/«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: install: warning: relinking `Silo.la' libtool: install: (cd /«PKGBUILDDIR»/tools/python; /bin/bash /«PKGBUILDDIR»/libtool --tag CXX --mode=relink g++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -module -avoid-version -L/usr/lib -Wl,-z,relro -Wl,--as-needed -o Silo.la -rpath /usr/lib/arm-linux-gnueabihf pydbfile.lo pydbtoc.lo pysilo.lo ../../src/libsiloh5.la -lhdf5 -lm -inst-prefix-dir /«PKGBUILDDIR»/debian/tmp) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/4.6/crtbeginS.o .libs/pydbfile.o .libs/pydbtoc.o .libs/pysilo.o -L/usr/lib -Wl,--as-needed -L/«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lsiloh5 -lhdf5 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6 -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.6/../../.. -L/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/4.6/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/4.6/../../../arm-linux-gnueabihf/crtn.o -O2 -Wl,-z -Wl,relro -Wl,-soname -Wl,Silo.so -o .libs/Silo.so libtool: install: /usr/bin/install -c .libs/Silo.soT /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/Silo.so libtool: install: /usr/bin/install -c .libs/Silo.lai /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/Silo.la libtool: install: /usr/bin/install -c .libs/Silo.a /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/Silo.a libtool: install: chmod 644 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/Silo.a libtool: install: ranlib /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/Silo.a libtool: install: warning: remember to run `libtool --finish /usr/lib/arm-linux-gnueabihf' make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/«PKGBUILDDIR»/tools/python' make[4]: Leaving directory `/«PKGBUILDDIR»/tools/python' Making install in silex make[4]: Entering directory `/«PKGBUILDDIR»/tools/silex' make install-am make[5]: Entering directory `/«PKGBUILDDIR»/tools/silex' make[6]: Entering directory `/«PKGBUILDDIR»/tools/silex' /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/bin' /bin/bash ../../libtool --mode=install /usr/bin/install -c silex '/«PKGBUILDDIR»/debian/tmp/usr/bin' libtool: install: warning: `../../src/libsiloh5.la' has not been installed in `/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/silex /«PKGBUILDDIR»/debian/tmp/usr/bin/silex make install-exec-hook make[7]: Entering directory `/«PKGBUILDDIR»/tools/silex' make[7]: Nothing to be done for `install-exec-hook'. make[7]: Leaving directory `/«PKGBUILDDIR»/tools/silex' make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/«PKGBUILDDIR»/tools/silex' make[5]: Leaving directory `/«PKGBUILDDIR»/tools/silex' make[4]: Leaving directory `/«PKGBUILDDIR»/tools/silex' make[3]: Leaving directory `/«PKGBUILDDIR»/tools' Making install in tests make[3]: Entering directory `/«PKGBUILDDIR»/tests' NOTICE: Silo test cases are not compiled by default. To compile and test NOTICE: them run "make check" from the silo "tests" directory. Otherwise NOTICE: you can compile them individually with "make TESTNAME". The test NOTICE: names are: array, dir, extface, multi_test, partial_io, point, quad, NOTICE: simple, ucd, ucdsamp3, testall, obj, onehex, oneprism, onepyramid, NOTICE: onetet, subhex, TestReadMask, twohex, multispec, sami, specmix, NOTICE: spec, cpz1plt, spec, cpz1plt, group_test, listtypes, alltypes, wave, NOTICE: multi_file, polyzl, csg, rocket, mmadjacency, largefile, version, NOTICE: namescheme, efcentering, mk_nasf_pdb, ioperf, arbpoly2d, readstuff, NOTICE: compression, grab, arrayf77, curvef77, matf77, pointf77, quadf77, NOTICE: ucdf77, testallf77, but "testall" is a good one to start with. make[4]: Entering directory `/«PKGBUILDDIR»/tests' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/«PKGBUILDDIR»/debian/tmp/usr/include' /usr/bin/install -c -m 644 ioperf.h '/«PKGBUILDDIR»/debian/tmp/usr/include' make[4]: Leaving directory `/«PKGBUILDDIR»/tests' make[3]: Leaving directory `/«PKGBUILDDIR»/tests' make[2]: Leaving directory `/«PKGBUILDDIR»' # move the python modules to where dh_pysupport will spot them ... set -e; for p in `pyversions -s`; do \ mkdir -p debian/python-silo/usr/lib/$p/site-packages ; \ chrpath -d debian/Silo.so.$p ; \ cp debian/Silo.so.$p debian/python-silo/usr/lib/$p/site-packages/Silo.so ; \ done dh_link -p libsiloh5-0 /usr/lib/arm-linux-gnueabihf/libsiloh5.so.0.0.0 /usr/lib/arm-linux-gnueabihf/libsiloh5.so.0 dh_link -p libsilo-dev /usr/lib/arm-linux-gnueabihf/libsiloh5.so.0.0.0 /usr/lib/arm-linux-gnueabihf/libsiloh5.so mkdir -p debian/libsilo-dev/usr/lib/arm-linux-gnueabihf/pkgconfig cp silo.pc debian/libsilo-dev/usr/lib/arm-linux-gnueabihf/pkgconfig make[1]: Leaving directory `/«PKGBUILDDIR»' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_installcatalogs -a dh_installcron -a dh_installdebconf -a dh_installemacsen -a dh_installifupdown -a dh_installinfo -a dh_installinit -a dh_installmenu -a dh_installmime -a dh_installmodules -a dh_installlogcheck -a dh_installlogrotate -a dh_installpam -a dh_installppp -a dh_installudev -a dh_installwm -a dh_installxfonts -a dh_installgsettings -a dh_bugfiles -a dh_ucf -a dh_lintian -a dh_gconf -a dh_icons -a dh_perl -a dh_python2 -a W: dh_python2:90: Python 2.6 should install files in /usr/lib/python2.6/dist-packages/. Did you forget "--install-layout=deb"? W: dh_python2:90: Python 2.7 should install files in /usr/lib/python2.7/dist-packages/. Did you forget "--install-layout=deb"? dh_usrlocal -a dh_link -a dh_compress -a dh_fixperms -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/python-silo/usr/lib/python2.6/dist-packages/Silo.so contains an unresolvable reference to symbol Py_FindMethod: it's probably a plugin. dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all). dpkg-shlibdeps: warning: debian/python-silo/usr/lib/python2.7/dist-packages/Silo.so contains an unresolvable reference to symbol Py_FindMethod: it's probably a plugin. dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all). dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: Depends field of package libsilo-dev: unknown substitution variable ${shlibs:Depends} dpkg-gencontrol: warning: package python-silo: unused substitution variable ${python:Versions} dh_md5sums -a dh_builddeb -a dpkg-deb: building package `libsilo-dev' in `../libsilo-dev_4.8-13_armhf.deb'. dpkg-deb: building package `libsiloh5-0' in `../libsiloh5-0_4.8-13_armhf.deb'. dpkg-deb: building package `libsilo-bin' in `../libsilo-bin_4.8-13_armhf.deb'. dpkg-deb: building package `python-silo' in `../python-silo_4.8-13_armhf.deb'. dpkg-genchanges -B -mbuildd >../silo-llnl_4.8-13_armhf.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build silo-llnl-4.8 dpkg-buildpackage: binary only upload (no source included) ──────────────────────────────────────────────────────────────────────────────── Build finished at 20120625-0426 Finished ──────── I: Built successfully ┌──────────────────────────────────────────────────────────────────────────────┐ │ Changes │ └──────────────────────────────────────────────────────────────────────────────┘ silo-llnl_4.8-13_armhf.changes: ─────────────────────────────── Format: 1.8 Date: Sat, 16 Jun 2012 11:46:24 +0100 Source: silo-llnl Binary: libsilo-dev libsiloh5-0 libsilo-bin python-silo Architecture: armhf Version: 4.8-13 Distribution: testing Urgency: low Maintainer: buildd Changed-By: Alastair McKinstry Description: libsilo-bin - Utilities to manipulate libsilo files libsilo-dev - Development files for SILO Scientific I/O library from LLNL libsiloh5-0 - SILO Science I/O library from LLNL python-silo - Python interface to the SILO Scientific I/O library Closes: 671614 Changes: silo-llnl (4.8-13) unstable; urgency=low . * Enable QT version 4.8.2 as well. Closes: #671614. * Pass CPPFLAGS, CFLAGS, LDFLAGS in rules to enable hardening. Checksums-Sha1: e8268b8d1733a6693f00e31c23233120e8b88ce7 1578070 libsilo-dev_4.8-13_armhf.deb 128058f7f0dd2000a348fe89006873c5149ca010 388760 libsiloh5-0_4.8-13_armhf.deb 6f58022bbb7ec4a825986b2dfa358889dbaffc05 161326 libsilo-bin_4.8-13_armhf.deb 6422ce53db4bf0b0495c83ef64d8f61a7b214f90 12368 python-silo_4.8-13_armhf.deb Checksums-Sha256: 2586913bf18b0b98aed5942c4375814ae5bc9afc85edd13006146e29a37fcd02 1578070 libsilo-dev_4.8-13_armhf.deb 4c2b05b451e8e2d81a94ac083ed71781917c77f8956b8198a7110f57b37d4c5f 388760 libsiloh5-0_4.8-13_armhf.deb 815488121fb83963c5b1243b42c48c240a5eb0ec462f25c76f3184faf3a792ec 161326 libsilo-bin_4.8-13_armhf.deb c621996d6010726aaae9ff967d8e613dcf86052751c80df15ce5bfa2265e8de4 12368 python-silo_4.8-13_armhf.deb Files: 6d6645e8d521880ed27ef06f24b0f7b1 1578070 libdevel optional libsilo-dev_4.8-13_armhf.deb 514c9b7fff939465c4c1db63a578ba59 388760 libs optional libsiloh5-0_4.8-13_armhf.deb e849d5a992c098c2480b41565a0f485e 161326 science optional libsilo-bin_4.8-13_armhf.deb 30afcadfd8a89e737854130c19f53bdf 12368 python optional python-silo_4.8-13_armhf.deb ┌──────────────────────────────────────────────────────────────────────────────┐ │ Package contents │ └──────────────────────────────────────────────────────────────────────────────┘ libsilo-dev_4.8-13_armhf.deb ──────────────────────────── new debian package, version 2.0. size 1578070 bytes: control archive= 1586 bytes. 1899 bytes, 36 lines control 735 bytes, 11 lines md5sums Package: libsilo-dev Source: silo-llnl Version: 4.8-13 Architecture: armhf Maintainer: Alastair McKinstry Installed-Size: 2498 Depends: libsiloh5-0 (= 4.8-13) Section: libdevel Priority: optional Multi-Arch: same Homepage: https://wci.llnl.gov/codes/silo Description: Development files for SILO Scientific I/O library from LLNL Silo is a library for reading and writing a wide variety of scientific data to binary, disk files. The files Silo produces and the data within them can be easily shared and exchanged between wholly independently developed applications running on disparate computing platforms. Consequently, Silo facilitates the development of general purpose tools for processing scientific data. One of the more popular tools that process Silo data files is the VisIt visualization tool. . Silo supports gridless (point) meshes, structured meshes, unstructured-zoo and unstructured-arbitrary-polyhedral meshes, block structured AMR meshes, constructive solid geometry (CSG) meshes, piecewise-constant (e.g. zone-centered) and piecewise-linear (e.g. node-centered) variables defined on the node, edge, face or volume elements of meshes as well as the decomposition of meshes into arbitrary subset hierarchies including materials and mixing materials. In addition, Silo supports a wide variety of other useful objects to address various scientific computing application needs. Although the Silo library is a serial library, it has some key features which enable it to be applied quite effectively and scalable in parallel. . Architecturally, the library is divided into two main pieces; an upper-level application programming interface (API) and a lower-level I/O implementation called a driver. Silo supports multiple I/O drivers, the two most common of which are the HDF5 (Hierarchical Data Format 5) and PDB (Portable Data Base) drivers. drwxr-xr-x root/root 0 2012-06-25 04:24 ./ drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/ drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/lib/ drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 1267668 2012-06-25 04:25 ./usr/lib/arm-linux-gnueabihf/libsiloh5.a drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/lib/arm-linux-gnueabihf/pkgconfig/ -rw-r--r-- root/root 314 2012-06-25 04:24 ./usr/lib/arm-linux-gnueabihf/pkgconfig/silo.pc drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/include/ -rw-r--r-- root/root 101345 2012-06-25 04:24 ./usr/include/silo.h -rw-r--r-- root/root 22780 2012-06-25 04:24 ./usr/include/pmpio.h -rw-r--r-- root/root 4260 2012-06-25 04:24 ./usr/include/ioperf.h -rw-r--r-- root/root 29608 2012-06-25 04:24 ./usr/include/silo.inc drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/share/ drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/share/doc/ drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/share/doc/libsilo-dev/ -rw-r--r-- root/root 2890 2010-09-15 15:46 ./usr/share/doc/libsilo-dev/FAQ.gz -rw-r--r-- root/root 1608 2012-06-16 12:53 ./usr/share/doc/libsilo-dev/changelog.Debian.gz -rw-r--r-- root/root 2810 2010-09-15 15:46 ./usr/share/doc/libsilo-dev/COPYRIGHT -rw-r--r-- root/root 1080251 2010-09-15 15:46 ./usr/share/doc/libsilo-dev/Silo.book.pdf.gz -rw-r--r-- root/root 2975 2012-06-16 12:53 ./usr/share/doc/libsilo-dev/copyright lrwxrwxrwx root/root 0 2012-06-25 04:25 ./usr/lib/arm-linux-gnueabihf/libsiloh5.so -> libsiloh5.so.0.0.0 libsiloh5-0_4.8-13_armhf.deb ──────────────────────────── new debian package, version 2.0. size 388760 bytes: control archive= 1238 bytes. 1260 bytes, 26 lines control 301 bytes, 4 lines md5sums 135 bytes, 7 lines * postinst #!/bin/sh 132 bytes, 7 lines * postrm #!/bin/sh 24 bytes, 1 lines shlibs Package: libsiloh5-0 Source: silo-llnl Version: 4.8-13 Architecture: armhf Maintainer: Alastair McKinstry Installed-Size: 916 Pre-Depends: multiarch-support Depends: libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libhdf5-openmpi-7 (>= 1.8.7), libopenmpi1.3 Section: libs Priority: optional Multi-Arch: same Homepage: https://wci.llnl.gov/codes/silo Description: SILO Science I/O library from LLNL Silo is a library for reading and writing a wide variety of scientific data to binary, disk files. . Silo supports gridless (point) meshes, structured meshes, unstructured-zoo and unstructured-arbitrary-polyhedral meshes, block structured AMR meshes, constructive solid geometry (CSG) meshes, piecewise-constant (e.g. zone-centered) and piecewise-linear (e.g. node-centered) variables defined on the node, edge, face or volume elements of meshes as well as the decomposition of meshes into arbitrary subset hierarchies including materials and mixing materials. In addition, Silo supports a wide variety of other useful objects to address various scientific computing application needs. Although the Silo library is a serial library, it has some key features which enable it to be applied quite effectively and scalable in parallel. drwxr-xr-x root/root 0 2012-06-25 04:24 ./ drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/ drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/lib/ drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 897332 2012-06-25 04:25 ./usr/lib/arm-linux-gnueabihf/libsiloh5.so.0.0.0 drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/share/ drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/share/doc/ drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/share/doc/libsiloh5-0/ -rw-r--r-- root/root 1608 2012-06-16 12:53 ./usr/share/doc/libsiloh5-0/changelog.Debian.gz -rw-r--r-- root/root 2810 2010-09-15 15:46 ./usr/share/doc/libsiloh5-0/COPYRIGHT -rw-r--r-- root/root 2975 2012-06-16 12:53 ./usr/share/doc/libsiloh5-0/copyright lrwxrwxrwx root/root 0 2012-06-25 04:25 ./usr/lib/arm-linux-gnueabihf/libsiloh5.so.0 -> libsiloh5.so.0.0.0 libsilo-bin_4.8-13_armhf.deb ──────────────────────────── new debian package, version 2.0. size 161326 bytes: control archive= 1191 bytes. 1346 bytes, 25 lines control 469 bytes, 8 lines md5sums Package: libsilo-bin Source: silo-llnl Version: 4.8-13 Architecture: armhf Maintainer: Alastair McKinstry Installed-Size: 408 Depends: libsiloh5-0 (= 4.8-13), libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libqtcore4 (>= 4:4.7.0~beta1), libqtgui4 (>= 4:4.5.3), libreadline6 (>= 6.0), libstdc++6 (>= 4.4.0) Section: science Priority: optional Multi-Arch: foreign Homepage: https://wci.llnl.gov/codes/silo Description: Utilities to manipulate libsilo files This package contains a number of utilities for manipulating and viewing Silo files. Silo is a scientific data format library. . Silo supports gridless (point) meshes, structured meshes, unstructured-zoo and unstructured-arbitrary-polyhedral meshes, block structured AMR meshes, constructive solid geometry (CSG) meshes, piecewise-constant (e.g. zone-centered) and piecewise-linear (e.g. node-centered) variables defined on the node, edge, face or volume elements of meshes as well as the decomposition of meshes into arbitrary subset hierarchies including materials and mixing materials. In addition, Silo supports a wide variety of other useful objects to address various scientific computing application needs. Although the Silo library is a serial library, it has some key features which enable it to be applied quite effectively and scalable in parallel. drwxr-xr-x root/root 0 2012-06-25 04:24 ./ drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/ drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/bin/ -rwxr-xr-x root/root 97556 2012-06-25 04:25 ./usr/bin/silex -rwxr-xr-x root/root 9756 2012-06-25 04:25 ./usr/bin/silock -rwxr-xr-x root/root 261744 2012-06-25 04:25 ./usr/bin/browser -rwxr-xr-x root/root 8329 2012-06-25 04:24 ./usr/bin/silodiff -rwxr-xr-x root/root 4025 2012-06-25 04:24 ./usr/bin/silofile drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/share/ drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/share/doc/ drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/share/doc/libsilo-bin/ -rw-r--r-- root/root 1608 2012-06-16 12:53 ./usr/share/doc/libsilo-bin/changelog.Debian.gz -rw-r--r-- root/root 2810 2010-09-15 15:46 ./usr/share/doc/libsilo-bin/COPYRIGHT -rw-r--r-- root/root 2975 2012-06-16 12:53 ./usr/share/doc/libsilo-bin/copyright python-silo_4.8-13_armhf.deb ──────────────────────────── new debian package, version 2.0. size 12368 bytes: control archive= 668 bytes. 549 bytes, 13 lines control 368 bytes, 5 lines md5sums Package: python-silo Source: silo-llnl Version: 4.8-13 Architecture: armhf Maintainer: Alastair McKinstry Installed-Size: 100 Depends: python2.7 | python2.6, python (>= 2.6), python (<< 2.8), libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libsiloh5-0 (= 4.8-13), libstdc++6 (>= 4.4.0) Provides: python2.6-silo, python2.7-silo Section: python Priority: optional Homepage: https://wci.llnl.gov/codes/silo Description: Python interface to the SILO Scientific I/O library This is a python interface to SILO, a scientific I/O library. drwxr-xr-x root/root 0 2012-06-25 04:24 ./ drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/ drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/lib/ drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/lib/python2.6/ drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/lib/python2.6/dist-packages/ -rw-r--r-- root/root 18472 2012-06-25 04:25 ./usr/lib/python2.6/dist-packages/Silo.so drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/lib/python2.7/ drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/lib/python2.7/dist-packages/ -rw-r--r-- root/root 18472 2012-06-25 04:25 ./usr/lib/python2.7/dist-packages/Silo.so drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/lib/pyshared/ drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/lib/pyshared/python2.6/ drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/lib/pyshared/python2.7/ drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/share/ drwxr-xr-x root/root 0 2012-06-25 04:24 ./usr/share/doc/ drwxr-xr-x root/root 0 2012-06-25 04:25 ./usr/share/doc/python-silo/ -rw-r--r-- root/root 1608 2012-06-16 12:53 ./usr/share/doc/python-silo/changelog.Debian.gz -rw-r--r-- root/root 2810 2010-09-15 15:46 ./usr/share/doc/python-silo/COPYRIGHT -rw-r--r-- root/root 2975 2012-06-16 12:53 ./usr/share/doc/python-silo/copyright lrwxrwxrwx root/root 0 2012-06-25 04:25 ./usr/lib/pyshared/python2.6/Silo.so -> ../../python2.6/dist-packages/Silo.so lrwxrwxrwx root/root 0 2012-06-25 04:25 ./usr/lib/pyshared/python2.7/Silo.so -> ../../python2.7/dist-packages/Silo.so ┌──────────────────────────────────────────────────────────────────────────────┐ │ Post Build │ └──────────────────────────────────────────────────────────────────────────────┘ ┌──────────────────────────────────────────────────────────────────────────────┐ │ Cleanup │ └──────────────────────────────────────────────────────────────────────────────┘ Purging /«BUILDDIR» Reading package lists... Building dependency tree... Reading state information... 0 upgraded, 0 newly installed, 0 to remove and 13 not upgraded. Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: adduser* autoconf* autoconf-archive* automake* autotools-dev* bsdmainutils* chrpath* debhelper* dh-autoreconf* file* fontconfig* fontconfig-config* gettext* gettext-base* gfortran* gfortran-4.6* groff-base* hdf5-helpers* html2text* intltool-debian* libasprintf0c2* libaudio2* libcroco3* libdb4.8* libdbus-1-3* libexpat1* libexpat1-dev* libffi5* libfontconfig1* libfreetype6* libgettextpo0* libgfortran3* libglib2.0-0* libhdf5-mpi-dev* libhdf5-openmpi-7* libhdf5-openmpi-dev* libibverbs-dev* libibverbs1* libice6* libjbig0* libjpeg8* libjpeg8-dev* liblcms1* libmagic1* libmng1* libopenmpi-dev* libopenmpi1.3* libpcre3* libpipeline1* libpng12-0* libpython2.6* libpython2.7* libqt4-dbus* libqt4-declarative* libqt4-designer* libqt4-dev* libqt4-dev-bin* libqt4-help* libqt4-network* libqt4-qt3support* libqt4-script* libqt4-scripttools* libqt4-sql* libqt4-svg* libqt4-test* libqt4-xml* libqt4-xmlpatterns* libqtcore4* libqtgui4* libreadline-dev* libreadline6-dev* libsm6* libsqlite3-0* libssl-dev* libssl1.0.0* libtiff4* libtinfo-dev* libtool* libtorque2* libunistring0* libx11-6* libx11-data* libxau6* libxcb1* libxdmcp6* libxext6* libxml2* libxrender1* libxt6* m4* man-db* mime-support* mpi-default-dev* openmpi-common* po-debconf* python* python-all* python-all-dev* python-dev* python-minimal* python2.6* python2.6-dev* python2.6-minimal* python2.7* python2.7-dev* python2.7-minimal* qdbus* qt4-linguist-tools* qt4-qmake* sbuild-build-depends-core-dummy* sbuild-build-depends-silo-llnl-dummy* ttf-dejavu-core* x11-common* zlib1g-dev* 0 upgraded, 0 newly installed, 114 to remove and 13 not upgraded. After this operation, 257 MB disk space will be freed. (Reading database ... 20868 files and directories currently installed.) Removing sbuild-build-depends-silo-llnl-dummy ... Removing libhdf5-mpi-dev ... Removing mpi-default-dev ... Removing libhdf5-openmpi-dev ... Removing libopenmpi-dev ... Removing libhdf5-openmpi-7 ... Purging configuration files for libhdf5-openmpi-7 ... Removing libopenmpi1.3 ... Purging configuration files for libopenmpi1.3 ... Removing libibverbs-dev ... Removing libibverbs1 ... Purging configuration files for libibverbs1 ... Removing adduser ... Purging configuration files for adduser ... Removing dh-autoreconf ... Removing automake ... Removing autoconf ... Purging configuration files for autoconf ... Removing autoconf-archive ... Removing libtool ... Removing autotools-dev ... Removing debhelper ... Removing man-db ... Purging configuration files for man-db ... Removing bsdmainutils ... Purging configuration files for bsdmainutils ... Removing chrpath ... 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Purging configuration files for libpcre3:armhf ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Summary │ └──────────────────────────────────────────────────────────────────────────────┘ Architecture: armhf Build-Space: 78772 Build-Time: 2388 Distribution: testing Install-Time: 237 Job: silo-llnl_4.8-13 Package: silo-llnl Package-Time: 2649 Source-Version: 4.8-13 Space: 78772 Status: successful Version: 4.8-13 ──────────────────────────────────────────────────────────────────────────────── Finished at 20120625-0426 Build needed 00:44:09, 78772k disc space