sbuild (Debian sbuild) 0.63.2 (18 Aug 2012) on build07.raspbian.lan ╔══════════════════════════════════════════════════════════════════════════════╗ ║ profnet 1.0.21-1+wheezy1 (armhf) 15 Jun 2013 09:44 ║ ╚══════════════════════════════════════════════════════════════════════════════╝ Package: profnet Version: 1.0.21-1+wheezy1 Source Version: 1.0.21-1+wheezy1 Distribution: wheezy-staging Machine Architecture: armhf Host Architecture: armhf Build Architecture: armhf I: NOTICE: Log filtering will replace 'build/profnet-lphRMR/profnet-1.0.21' with '«PKGBUILDDIR»' I: NOTICE: Log filtering will replace 'build/profnet-lphRMR' with '«BUILDDIR»' I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/wheezy-staging-armhf-sbuild-f8164982-4c68-4a0f-94ba-1c3882d46b3f' with '«CHROOT»' ┌──────────────────────────────────────────────────────────────────────────────┐ │ Update chroot │ └──────────────────────────────────────────────────────────────────────────────┘ Hit http://archive.raspbian.lan wheezy-staging Release.gpg Hit http://archive.raspbian.lan wheezy-staging Release Hit http://archive.raspbian.lan wheezy-staging/main Sources Hit http://archive.raspbian.lan wheezy-staging/main armhf Packages Ign http://archive.raspbian.lan wheezy-staging/main Translation-en Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Fetch source files │ └──────────────────────────────────────────────────────────────────────────────┘ Check APT ───────── Checking available source versions... Download source files with APT ────────────────────────────── Reading package lists... Building dependency tree... Reading state information... NOTICE: 'profnet' packaging is maintained in the 'Svn' version control system at: svn://svn.debian.org/svn/debian-med/trunk/packages/rostlab/profnet/trunk/ Need to get 264 kB of source archives. Get:1 http://archive.raspbian.lan/raspbian/ wheezy-staging/main profnet 1.0.21-1+wheezy1 (dsc) [2495 B] Get:2 http://archive.raspbian.lan/raspbian/ wheezy-staging/main profnet 1.0.21-1+wheezy1 (tar) [256 kB] Get:3 http://archive.raspbian.lan/raspbian/ wheezy-staging/main profnet 1.0.21-1+wheezy1 (diff) [5001 B] Fetched 264 kB in 0s (1858 kB/s) Download complete and in download only mode Check arch ────────── Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-WAQUWk/apt_archive/sbuild-build-depends-core-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install core build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... sbuild-build-depends-core-dummy is already the newest version. The following packages were automatically installed and are no longer required: adduser blt ca-certificates debhelper docbook docbook-to-man fontconfig fontconfig-config fonts-lyx freeglut3 freeglut3-dev gccxml gettext gettext-base gir1.2-glib-2.0 groff-base html2text intltool-debian ipython iso-codes libasprintf0c2 libatk1.0-0 libatk1.0-data libaudio2 libavahi-client3 libavahi-common-data libavahi-common3 libavcodec-dev libavcodec53 libavformat-dev libavformat53 libavutil-dev libavutil51 libblas3gf libboost-date-time-dev libboost-dev libboost-filesystem-dev libboost-program-options-dev libboost-python1.49.0 libboost-serialization-dev libboost-thread-dev libcairo2 libcf0 libcgal-dev libcgal9 libcroco3 libcups2 libcurl3-gnutls libdatrie1 libdbus-1-3 libdirac-encoder0 libdrm2 libeigen3-dev libelf1 libexpat1-dev libffi5 libfontconfig1 libfontconfig1-dev libfreetype6 libfreetype6-dev libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgettextpo0 libgirepository-1.0-1 libgl1-mesa-dev libgl1-mesa-glx libgl2ps-dev libgl2ps0 libglapi-mesa libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev libglu1-mesa libglu1-mesa-dev libgmp-dev libgmpxx4ldbl libgsm1 libgstreamer-plugins-base0.10-0 libgstreamer0.10-0 libgtk2.0-0 libgtk2.0-common libgts-0.7-5 libgts-dev libibverbs-dev libibverbs1 libice-dev libice6 libidn11 libjasper1 libjbig-dev libjpeg8 libjpeg8-dev liblapack3gf liblcms1 libloki-dev libloki0.1.7 libmng1 libmp3lame0 libmpfr-dev libmysqlclient-dev libmysqlclient18 libnetcdf-dev libnetcdfc++4 libnetcdfc7 libnetcdff5 libogg0 libopenjpeg2 libopenmpi-dev libopenmpi1.3 liborc-0.4-0 libpango1.0-0 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-dev libpopt0 libpq5 libpthread-stubs0 libpthread-stubs0-dev libqglviewer-dev-common libqglviewer-qt4-2 libqglviewer-qt4-dev libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-opengl libqt4-opengl-dev libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtassistantclient4 libqtcore4 libqtdbus4 libqtgui4 libqtwebkit4 librtmp0 libschroedinger-1.0-0 libsm-dev libsm6 libsp1c2 libspeex1 libssh2-1 libswscale-dev libswscale2 libthai-data libthai0 libtheora0 libtiff4 libtiff4-dev libtiffxx0c2 libtorque2 libunistring0 libva1 libvorbis0a libvorbisenc2 libvpx1 libvtk5.8 libx11-6 libx11-data libx11-dev libx11-xcb1 libx264-123 libxau-dev libxau6 libxcb-glx0 libxcb-render0 libxcb-shm0 libxcb1 libxcb1-dev libxcomposite1 libxcursor1 libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxft-dev libxft2 libxi6 libxinerama1 libxml2 libxml2-dev libxmu-dev libxmu-headers libxmu6 libxrandr2 libxrender-dev libxrender1 libxss-dev libxss1 libxt-dev libxt6 libxvidcore4 libxxf86vm1 man-db mesa-common-dev mpi-default-dev mysql-common openmpi-common openssl pkg-config po-debconf pyqt4-dev-tools python python-cairo python-configobj python-dateutil python-decorator python-gi python-gobject python-gobject-2 python-imaging python-matplotlib python-matplotlib-data python-minimal python-numpy python-pexpect python-pyparsing python-qt4 python-simplegeneric python-sip python-support python-tk python-tz python-xlib qdbus qt4-linguist-tools qt4-qmake scons sgml-base sgml-data shared-mime-info sp tcl8.5 tcl8.5-dev tk8.5 tk8.5-dev ttf-dejavu-core x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev x11proto-render-dev x11proto-scrnsaver-dev x11proto-xext-dev xml-core xorg-sgml-doctools xtrans-dev zlib1g-dev Use 'apt-get autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 21 not upgraded. Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 7), gfortran, rsync Filtered Build-Depends: libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 7), gfortran, rsync dpkg-deb: building package `sbuild-build-depends-profnet-dummy' in `/«BUILDDIR»/resolver-N_UrIF/apt_archive/sbuild-build-depends-profnet-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install profnet build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: adduser blt ca-certificates docbook docbook-to-man fontconfig fontconfig-config fonts-lyx freeglut3 freeglut3-dev gccxml gir1.2-glib-2.0 ipython iso-codes libatk1.0-0 libatk1.0-data libaudio2 libavahi-client3 libavahi-common-data libavahi-common3 libavcodec-dev libavcodec53 libavformat-dev libavformat53 libavutil-dev libavutil51 libblas3gf libboost-date-time-dev libboost-dev libboost-filesystem-dev libboost-program-options-dev libboost-python1.49.0 libboost-serialization-dev libboost-thread-dev libcairo2 libcf0 libcgal-dev libcgal9 libcups2 libcurl3-gnutls libdatrie1 libdbus-1-3 libdirac-encoder0 libdrm2 libeigen3-dev libelf1 libexpat1-dev libfontconfig1 libfontconfig1-dev libfreetype6 libfreetype6-dev libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgirepository-1.0-1 libgl1-mesa-dev libgl1-mesa-glx libgl2ps-dev libgl2ps0 libglapi-mesa libglib2.0-bin libglib2.0-dev libglu1-mesa libglu1-mesa-dev libgmp-dev libgmpxx4ldbl libgsm1 libgstreamer-plugins-base0.10-0 libgstreamer0.10-0 libgtk2.0-0 libgtk2.0-common libgts-0.7-5 libgts-dev libibverbs-dev libibverbs1 libice-dev libice6 libidn11 libjasper1 libjbig-dev libjpeg8 libjpeg8-dev liblapack3gf liblcms1 libloki-dev libloki0.1.7 libmng1 libmp3lame0 libmpfr-dev libmysqlclient-dev libmysqlclient18 libnetcdf-dev libnetcdfc++4 libnetcdfc7 libnetcdff5 libogg0 libopenjpeg2 libopenmpi-dev libopenmpi1.3 liborc-0.4-0 libpango1.0-0 libpcre3-dev libpcrecpp0 libpixman-1-0 libpng12-dev libpq5 libpthread-stubs0 libpthread-stubs0-dev libqglviewer-dev-common libqglviewer-qt4-2 libqglviewer-qt4-dev libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-opengl libqt4-opengl-dev libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtassistantclient4 libqtcore4 libqtdbus4 libqtgui4 libqtwebkit4 librtmp0 libschroedinger-1.0-0 libsm-dev libsm6 libsp1c2 libspeex1 libssh2-1 libswscale-dev libswscale2 libthai-data libthai0 libtheora0 libtiff4 libtiff4-dev libtiffxx0c2 libtorque2 libva1 libvorbis0a libvorbisenc2 libvpx1 libvtk5.8 libx11-6 libx11-data libx11-dev libx11-xcb1 libx264-123 libxau-dev libxau6 libxcb-glx0 libxcb-render0 libxcb-shm0 libxcb1 libxcb1-dev libxcomposite1 libxcursor1 libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxft-dev libxft2 libxi6 libxinerama1 libxml2-dev libxmu-dev libxmu-headers libxmu6 libxrandr2 libxrender-dev libxrender1 libxss-dev libxss1 libxt-dev libxt6 libxvidcore4 libxxf86vm1 mesa-common-dev mpi-default-dev mysql-common openmpi-common openssl pkg-config pyqt4-dev-tools python python-cairo python-configobj python-dateutil python-decorator python-gi python-gobject python-gobject-2 python-imaging python-matplotlib python-matplotlib-data python-minimal python-numpy python-pexpect python-pyparsing python-qt4 python-simplegeneric python-sip python-support python-tk python-tz python-xlib qdbus qt4-linguist-tools qt4-qmake scons sgml-data sp tcl8.5 tcl8.5-dev tk8.5 tk8.5-dev ttf-dejavu-core x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev x11proto-render-dev x11proto-scrnsaver-dev x11proto-xext-dev xorg-sgml-doctools xtrans-dev zlib1g-dev Use 'apt-get autoremove' to remove them. The following extra packages will be installed: gfortran gfortran-4.6 rsync Suggested packages: gfortran-doc gfortran-4.6-doc libgfortran3-dbg openssh-client openssh-server The following NEW packages will be installed: gfortran gfortran-4.6 rsync sbuild-build-depends-profnet-dummy 0 upgraded, 4 newly installed, 0 to remove and 21 not upgraded. Need to get 5190 kB/5191 kB of archives. After this operation, 12.6 MB of additional disk space will be used. Get:1 http://archive.raspbian.lan/raspbian/ wheezy-staging/main gfortran-4.6 armhf 4.6.3-14+rpi1 [4833 kB] Get:2 http://archive.raspbian.lan/raspbian/ wheezy-staging/main gfortran armhf 4:4.6.3-8 [1134 B] Get:3 http://archive.raspbian.lan/raspbian/ wheezy-staging/main rsync armhf 3.0.9-4 [356 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 5190 kB in 1s (3587 kB/s) Selecting previously unselected package gfortran-4.6. (Reading database ... 42426 files and directories currently installed.) Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-14+rpi1_armhf.deb) ... Selecting previously unselected package gfortran. Unpacking gfortran (from .../gfortran_4%3a4.6.3-8_armhf.deb) ... Selecting previously unselected package rsync. Unpacking rsync (from .../rsync_3.0.9-4_armhf.deb) ... Selecting previously unselected package sbuild-build-depends-profnet-dummy. Unpacking sbuild-build-depends-profnet-dummy (from .../sbuild-build-depends-profnet-dummy.deb) ... Processing triggers for man-db ... Setting up gfortran-4.6 (4.6.3-14+rpi1) ... Setting up gfortran (4:4.6.3-8) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode Setting up rsync (3.0.9-4) ... update-rc.d: using dependency based boot sequencing All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of restart. Setting up sbuild-build-depends-profnet-dummy (0.invalid.0) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build environment │ └──────────────────────────────────────────────────────────────────────────────┘ Kernel: Linux 3.2.0-2-mx5 armhf (armv7l) Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.6_4.6.3-14+rpi1 gcc-4.6_4.6.3-14+rpi1 libc6-dev_2.13-38+rpi2 libstdc++6_4.7.2-5+rpi1 libstdc++6-4.6-dev_4.6.3-14+rpi1 linux-libc-dev_3.2.41-2+rpi1 Package versions: adduser_3.113+nmu3 apt_0.9.7.8+rpi1 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-0.1 binutils_2.22-8 blt_2.4z-4.2 bsdmainutils_9.0.3 bsdutils_1:2.20.1-5.3 build-essential_11.5+b1 bzip2_1.0.6-4 ca-certificates_20130119 comerr-dev_2.1-1.42.5-1.1 coreutils_8.13-3.5 cpp_4:4.6.3-8 cpp-4.6_4.6.3-14+rpi1 dash_0.5.7-3 debconf_1.5.49 debconf-i18n_1.5.49 debfoster_2.7-1.2 debhelper_9.20120909 debianutils_4.3.2 diffutils_1:3.2-6 docbook_4.5-5.1 docbook-to-man_1:2.0.0-31 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 eatmydata_26-2 fakeroot_1.18.4-2 file_5.11-2 findutils_4.4.2-4 fontconfig_2.9.0-7.1 fontconfig-config_2.9.0-7.1 fonts-lyx_2.0.3-3 freeglut3_2.6.0-4 freeglut3-dev_2.6.0-4 g++_4:4.6.3-8 g++-4.6_4.6.3-14+rpi1 gcc_4:4.6.3-8 gcc-4.4-base_4.4.7-3+rpi1 gcc-4.5-base_4.5.3-12+rpi1 gcc-4.6_4.6.3-14+rpi1 gcc-4.6-base_4.6.3-14+rpi1 gcc-4.7-base_4.7.2-5+rpi1 gccxml_0.9.0+cvs20120420-4 gdb_7.4.1+dfsg-0.1 gdbserver_7.4.1+dfsg-0.1 gettext_0.18.1.1-9 gettext-base_0.18.1.1-9 gfortran_4:4.6.3-8 gfortran-4.6_4.6.3-14+rpi1 gir1.2-glib-2.0_1.32.1-1 gnupg_1.4.12-7 gpgv_1.4.12-7 grep_2.12-2 groff-base_1.21-9 gzip_1.5-1.1 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-41 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.1 ipython_0.13.1-2 iso-codes_3.41-1 krb5-multidev_1.10.1+dfsg-5 libacl1_2.2.51-8 libapt-pkg4.12_0.9.7.8+rpi1 libasprintf0c2_0.18.1.1-9 libatk1.0-0_2.4.0-2 libatk1.0-data_2.4.0-2 libattr1_1:2.4.46-8 libaudio2_1.9.3-5 libavahi-client3_0.6.31-2 libavahi-common-data_0.6.31-2 libavahi-common3_0.6.31-2 libavcodec-dev_6:0.8.6-1+rpi1 libavcodec53_6:0.8.6-1+rpi1 libavformat-dev_6:0.8.6-1+rpi1 libavformat53_6:0.8.6-1+rpi1 libavutil-dev_6:0.8.6-1+rpi1 libavutil51_6:0.8.6-1+rpi1 libblas3_1.2.20110419-5 libblas3gf_1.2.20110419-5 libblkid1_2.20.1-5.3 libboost-date-time-dev_1.49.0.1 libboost-date-time1.49-dev_1.49.0-3.2 libboost-date-time1.49.0_1.49.0-3.2 libboost-dev_1.49.0.1 libboost-filesystem-dev_1.49.0.1 libboost-filesystem1.49-dev_1.49.0-3.2 libboost-filesystem1.49.0_1.49.0-3.2 libboost-iostreams-dev_1.49.0.1 libboost-iostreams1.49-dev_1.49.0-3.2 libboost-iostreams1.49.0_1.49.0-3.2 libboost-program-options-dev_1.49.0.1 libboost-program-options1.49-dev_1.49.0-3.2 libboost-program-options1.49.0_1.49.0-3.2 libboost-python1.49.0_1.49.0-3.2 libboost-regex-dev_1.49.0.1 libboost-regex1.49-dev_1.49.0-3.2 libboost-regex1.49.0_1.49.0-3.2 libboost-serialization-dev_1.49.0.1 libboost-serialization1.49-dev_1.49.0-3.2 libboost-serialization1.49.0_1.49.0-3.2 libboost-system1.49-dev_1.49.0-3.2 libboost-system1.49.0_1.49.0-3.2 libboost-thread-dev_1.49.0.1 libboost-thread1.49-dev_1.49.0-3.2 libboost-thread1.49.0_1.49.0-3.2 libboost1.49-dev_1.49.0-3.2 libbz2-1.0_1.0.6-4 libc-bin_2.13-38+rpi2 libc-dev-bin_2.13-38+rpi2 libc6_2.13-38+rpi2 libc6-dev_2.13-38+rpi2 libcairo2_1.12.2-3 libcf0_1:4.1.3-6 libcgal-dev_4.0-5 libcgal9_4.0-5 libclass-isa-perl_0.36-3 libcomerr2_1.42.5-1.1 libcroco3_0.6.6-2 libcups2_1.5.3-5 libcurl3-gnutls_7.26.0-1+wheezy2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-5 libdbus-1-3_1.6.8-1 libdirac-encoder0_1.0.2-6 libdpkg-perl_1.16.10 libdrm2_2.4.40-1~deb7u2 libeigen3-dev_3.1.0-1 libelf1_0.152-1+wheezy1 libexpat1_2.1.0-1 libexpat1-dev_2.1.0-1 libffi5_3.0.10-3+b3 libfontconfig1_2.9.0-7.1 libfontconfig1-dev_2.9.0-7.1 libfreetype6_2.4.9-1.1 libfreetype6-dev_2.4.9-1.1 libgc1c2_1:7.1-9.1 libgcc1_1:4.7.2-5+rpi1 libgcrypt11_1.5.0-5 libgdbm3_1.8.3-11 libgdk-pixbuf2.0-0_2.26.1-1 libgdk-pixbuf2.0-common_2.26.1-1 libgettextpo0_0.18.1.1-9 libgfortran3_4.7.2-5+rpi1 libgirepository-1.0-1_1.32.1-1 libgl1-mesa-dev_8.0.5-4+deb7u1 libgl1-mesa-glx_8.0.5-4+deb7u1 libgl2ps-dev_1.3.6-1 libgl2ps0_1.3.6-1 libglapi-mesa_8.0.5-4+deb7u1 libglib2.0-0_2.33.12+really2.32.4-5 libglib2.0-bin_2.33.12+really2.32.4-5 libglib2.0-data_2.33.12+really2.32.4-5 libglib2.0-dev_2.33.12+really2.32.4-5 libglu1-mesa_8.0.5-4+deb7u1 libglu1-mesa-dev_8.0.5-4+deb7u1 libgmp-dev_2:5.0.5+dfsg-2 libgmp10_2:5.0.5+dfsg-2 libgmpxx4ldbl_2:5.0.5+dfsg-2 libgnutls26_2.12.20-6 libgomp1_4.7.2-5+rpi1 libgpg-error0_1.10-3.1 libgsm1_1.0.13-4 libgssapi-krb5-2_1.10.1+dfsg-5 libgssrpc4_1.10.1+dfsg-5 libgstreamer-plugins-base0.10-0_0.10.36-1.1 libgstreamer0.10-0_0.10.36-1.2 libgtk2.0-0_2.24.10-2 libgtk2.0-common_2.24.10-2 libgts-0.7-5_0.7.6+darcs110121-1.1 libgts-dev_0.7.6+darcs110121-1.1 libhdf5-7_1.8.8-9 libibverbs-dev_1.1.6-1 libibverbs1_1.1.6-1 libice-dev_2:1.0.8-2 libice6_2:1.0.8-2 libicu-dev_4.8.1.1-12 libicu48_4.8.1.1-12 libidn11_1.25-2 libjasper1_1.900.1-13 libjbig-dev_2.0-2 libjbig0_2.0-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 libk5crypto3_1.10.1+dfsg-5 libkadm5clnt-mit8_1.10.1+dfsg-5 libkadm5srv-mit8_1.10.1+dfsg-5 libkdb5-6_1.10.1+dfsg-5 libkeyutils1_1.5.5-3 libkrb5-3_1.10.1+dfsg-5 libkrb5-dev_1.10.1+dfsg-5 libkrb5support0_1.10.1+dfsg-5 liblapack3_3.4.1+dfsg-1 liblapack3gf_3.4.1+dfsg-1 liblcms1_1.19.dfsg-1.2 libldap-2.4-2_2.4.31-1+nmu2 liblocale-gettext-perl_1.05-7 libloki-dev_0.1.7-3 libloki0.1.7_0.1.7-3 liblzma5_5.1.1alpha+20120614-2 libmagic1_5.11-2 libmng1_1.0.10-3 libmount1_2.20.1-5.3 libmp3lame0_3.99.5+repack1-3 libmpc2_0.9-4 libmpfr-dev_3.1.0-5 libmpfr4_3.1.0-5 libmysqlclient-dev_5.5.31+dfsg-0+wheezy1 libmysqlclient18_5.5.31+dfsg-0+wheezy1 libncurses5_5.9-10 libncursesw5_5.9-10 libnetcdf-dev_1:4.1.3-6 libnetcdfc++4_1:4.1.3-6 libnetcdfc7_1:4.1.3-6 libnetcdff5_1:4.1.3-6 libogg0_1.3.0-4 libopenjpeg2_1.3+dfsg-4.6 libopenmpi-dev_1.4.5-1 libopenmpi1.3_1.4.5-1 liborc-0.4-0_1:0.4.16-2 libp11-kit0_0.12-3 libpam-modules_1.1.3-7.1 libpam-modules-bin_1.1.3-7.1 libpam-runtime_1.1.3-7.1 libpam0g_1.1.3-7.1 libpango1.0-0_1.30.0-1 libpcre3_1:8.30-5 libpcre3-dev_1:8.30-5 libpcrecpp0_1:8.30-5 libpipeline1_1.2.1-1 libpixman-1-0_0.26.0-4 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libpopt0_1.16-7 libpq5_9.1.9-1 libpthread-stubs0_0.3-3 libpthread-stubs0-dev_0.3-3 libpython2.7_2.7.3-6 libqglviewer-dev-common_2.3.4-4.2 libqglviewer-qt4-2_2.3.4-4.2 libqglviewer-qt4-dev_2.3.4-4.2 libqt4-dbus_4:4.8.2+dfsg-11+rpi1 libqt4-declarative_4:4.8.2+dfsg-11+rpi1 libqt4-designer_4:4.8.2+dfsg-11+rpi1 libqt4-dev_4:4.8.2+dfsg-11+rpi1 libqt4-dev-bin_4:4.8.2+dfsg-11+rpi1 libqt4-help_4:4.8.2+dfsg-11+rpi1 libqt4-network_4:4.8.2+dfsg-11+rpi1 libqt4-opengl_4:4.8.2+dfsg-11+rpi1 libqt4-opengl-dev_4:4.8.2+dfsg-11+rpi1 libqt4-qt3support_4:4.8.2+dfsg-11+rpi1 libqt4-script_4:4.8.2+dfsg-11+rpi1 libqt4-scripttools_4:4.8.2+dfsg-11+rpi1 libqt4-sql_4:4.8.2+dfsg-11+rpi1 libqt4-svg_4:4.8.2+dfsg-11+rpi1 libqt4-test_4:4.8.2+dfsg-11+rpi1 libqt4-xml_4:4.8.2+dfsg-11+rpi1 libqt4-xmlpatterns_4:4.8.2+dfsg-11+rpi1 libqtassistantclient4_4.6.3-4 libqtcore4_4:4.8.2+dfsg-11+rpi1 libqtdbus4_4:4.8.2+dfsg-11+rpi1 libqtgui4_4:4.8.2+dfsg-11+rpi1 libqtwebkit4_2.2.1-5 libreadline6_6.2+dfsg-0.1 librtmp0_2.4+20111222.git4e06e21-1 libsasl2-2_2.1.25.dfsg1-6 libschroedinger-1.0-0_1.0.11-2 libselinux1_2.1.9-5 libsemanage-common_2.1.6-6 libsemanage1_2.1.6-6 libsepol1_2.1.4-3 libslang2_2.2.4-15 libsm-dev_2:1.2.1-2 libsm6_2:1.2.1-2 libsp1c2_1.3.4-1.2.1-47.1 libspeex1_1.2~rc1-7 libsqlite3-0_3.7.13-1+deb7u1 libss2_1.42.5-1.1 libssh2-1_1.4.2-1.1 libssl1.0.0_1.0.1e-2+rpi1 libstdc++6_4.7.2-5+rpi1 libstdc++6-4.6-dev_4.6.3-14+rpi1 libswitch-perl_2.16-2 libswscale-dev_6:0.8.6-1+rpi1 libswscale2_6:0.8.6-1+rpi1 libtasn1-3_2.13-2 libtext-charwidth-perl_0.04-7 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libthai-data_0.1.18-2 libthai0_0.1.18-2 libtheora0_1.1.1+dfsg.1-3.1 libtiff4_3.9.6-11 libtiff4-dev_3.9.6-11 libtiffxx0c2_3.9.6-11 libtimedate-perl_1.2000-1 libtinfo5_5.9-10 libtorque2_2.4.16+dfsg-1 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20+nmu1 libustr-1.0-1_1.0.4-3 libuuid1_2.20.1-5.3 libva1_1.0.15-4 libvorbis0a_1.3.2-1.3 libvorbisenc2_1.3.2-1.3 libvpx1_1.1.0-1+rpi1 libvtk5.8_5.8.0-13 libx11-6_2:1.5.0-1+deb7u1 libx11-data_2:1.5.0-1+deb7u1 libx11-dev_2:1.5.0-1+deb7u1 libx11-xcb1_2:1.5.0-1+deb7u1 libx264-123_2:0.123.2189+git35cf912-1+rpi1 libxau-dev_1:1.0.7-1 libxau6_1:1.0.7-1 libxcb-glx0_1.8.1-2+deb7u1 libxcb-render0_1.8.1-2+deb7u1 libxcb-shm0_1.8.1-2+deb7u1 libxcb1_1.8.1-2+deb7u1 libxcb1-dev_1.8.1-2+deb7u1 libxcomposite1_1:0.4.3-2 libxcursor1_1:1.1.13-1+deb7u1 libxdamage1_1:1.1.3-2 libxdmcp-dev_1:1.1.1-1 libxdmcp6_1:1.1.1-1 libxext-dev_2:1.3.1-2+deb7u1 libxext6_2:1.3.1-2+deb7u1 libxfixes3_1:5.0-4+deb7u1 libxft-dev_2.3.1-1 libxft2_2.3.1-1 libxi6_2:1.6.1-1+deb7u1 libxinerama1_2:1.1.2-1+deb7u1 libxml2_2.8.0+dfsg1-7+nmu1 libxml2-dev_2.8.0+dfsg1-7+nmu1 libxmu-dev_2:1.1.1-1 libxmu-headers_2:1.1.1-1 libxmu6_2:1.1.1-1 libxrandr2_2:1.3.2-2+deb7u1 libxrender-dev_1:0.9.7-1+deb7u1 libxrender1_1:0.9.7-1+deb7u1 libxss-dev_1:1.2.2-1 libxss1_1:1.2.2-1 libxt-dev_1:1.1.3-1+deb7u1 libxt6_1:1.1.3-1+deb7u1 libxvidcore4_2:1.3.2-9 libxxf86vm1_1:1.1.2-1+deb7u1 linux-libc-dev_3.2.41-2+rpi1 login_1:4.1.5.1-1 lsb-base_4.1+Debian8+rpi1 make_3.81-8.2 man-db_2.6.2-1 mawk_1.3.3-17 mesa-common-dev_8.0.5-4+deb7u1 mime-support_3.52-1 mount_2.20.1-5.3 mpi-default-dev_1.0.1 multiarch-support_2.13-38+rpi2 mysql-common_5.5.31+dfsg-0+wheezy1 ncurses-base_5.9-10 ncurses-bin_5.9-10 openmpi-common_1.4.5-1 openssl_1.0.1e-2+rpi1 passwd_1:4.1.5.1-1 patch_2.6.1-3 perl_5.14.2-21+rpi1 perl-base_5.14.2-21+rpi1 perl-modules_5.14.2-21+rpi1 pkg-config_0.26-1 po-debconf_1.0.16+nmu2 pyqt4-dev-tools_4.9.3-4 python_2.7.3-4 python-cairo_1.8.8-1 python-configobj_4.7.2+ds-4 python-dateutil_1.5+dfsg-0.1 python-decorator_3.3.3-1 python-gi_3.2.2-2 python-gobject_3.2.2-2 python-gobject-2_2.28.6-10 python-imaging_1.1.7-4 python-matplotlib_1.1.1~rc2-1 python-matplotlib-data_1.1.1~rc2-1 python-minimal_2.7.3-4 python-numpy_1:1.6.2-1.2 python-pexpect_2.4-1 python-pyparsing_1.5.6+dfsg1-2 python-qt4_4.9.3-4 python-simplegeneric_0.8.1-1 python-sip_4.13.3-2 python-support_1.0.15 python-tk_2.7.3-1 python-tz_2012c-1 python-xlib_0.14+20091101-1 python2.7_2.7.3-6 python2.7-minimal_2.7.3-6 qdbus_4:4.8.2+dfsg-11+rpi1 qt4-linguist-tools_4:4.8.2+dfsg-11+rpi1 qt4-qmake_4:4.8.2+dfsg-11+rpi1 raspbian-archive-keyring_20120528.2 readline-common_6.2+dfsg-0.1 rsync_3.0.9-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-profnet-dummy_0.invalid.0 scons_2.1.0-1 sed_4.2.1-10 sensible-utils_0.0.7 sgml-base_1.26+nmu4 sgml-data_2.0.8 shared-mime-info_1.0-1 sp_1.3.4-1.2.1-47.1 sysv-rc_2.88dsf-41 sysvinit_2.88dsf-41 sysvinit-utils_2.88dsf-41 tar_1.26+dfsg-0.1 tcl8.5_8.5.11-2 tcl8.5-dev_8.5.11-2 tk8.5_8.5.11-2 tk8.5-dev_8.5.11-2 ttf-dejavu-core_2.33-3 tzdata_2013b-2 ucf_3.0025+nmu3 util-linux_2.20.1-5.3 x11-common_1:7.7+2 x11proto-core-dev_7.0.23-1 x11proto-input-dev_2.2-1 x11proto-kb-dev_1.0.6-2 x11proto-render-dev_2:0.11.1-2 x11proto-scrnsaver-dev_1.2.2-1 x11proto-xext-dev_7.2.1-1 xml-core_0.13+nmu2 xorg-sgml-doctools_1:1.10-1 xtrans-dev_1.2.7-1 xz-utils_5.1.1alpha+20120614-2 zlib1g_1:1.2.7.dfsg-13 zlib1g-dev_1:1.2.7.dfsg-13 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build │ └──────────────────────────────────────────────────────────────────────────────┘ Unpack source ───────────── gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error gpgv: Signature made Tue May 21 11:33:03 2013 UTC using RSA key ID 9A0C52FA gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./profnet_1.0.21-1+wheezy1.dsc dpkg-source: info: extracting profnet in profnet-1.0.21 dpkg-source: info: unpacking profnet_1.0.21.orig.tar.gz dpkg-source: info: unpacking profnet_1.0.21-1+wheezy1.debian.tar.gz dpkg-source: info: applying isis Check disc space ──────────────── Sufficient free space for build User Environment ──────────────── HOME=/sbuild-nonexistent LD_PRELOAD=/usr/lib/libeatmydata/libeatmydata.so LOGNAME=buildd PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/X11R6/bin:/usr/games PWD=/«PKGBUILDDIR» SCHROOT_ALIAS_NAME=wheezy-staging-armhf-sbuild SCHROOT_CHROOT_NAME=wheezy-staging-armhf-sbuild SCHROOT_COMMAND=env SCHROOT_GID=108 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=wheezy-staging-armhf-sbuild-f8164982-4c68-4a0f-94ba-1c3882d46b3f SCHROOT_UID=106 SCHROOT_USER=buildd SHELL=/bin/sh USER=buildd dpkg-buildpackage ───────────────── dpkg-buildpackage: source package profnet dpkg-buildpackage: source version 1.0.21-1+wheezy1 dpkg-source --before-build profnet-1.0.21 dpkg-buildpackage: host architecture armhf fakeroot debian/rules clean dh_testdir dh_testroot rm -f build-stamp configure-stamp # Add here commands to clean up after the build process. /usr/bin/make distclean make[1]: Entering directory `/«PKGBUILDDIR»' /usr/bin/make -C src clean make[2]: Entering directory `/«PKGBUILDDIR»/src' rm -f *.o profnet_prof make[2]: Leaving directory `/«PKGBUILDDIR»/src' /usr/bin/make -C src-phd clean make[2]: Entering directory `/«PKGBUILDDIR»/src-phd' rm -f *.o profphd_net make[2]: Leaving directory `/«PKGBUILDDIR»/src-phd' rm -f *.[0123456789].gz rm -rf bval_dir rm -rf chop_dir rm -rf con_dir rm -rf isis_dir rm -rf md_dir rm -rf norsnet_dir rm -rf prof_dir rm -rf snapfun_dir rm -rf\ profnet-1.0.21 \ profnet-1.0.21.tar.gz make[1]: Leaving directory `/«PKGBUILDDIR»' dh_clean dpkg-buildpackage: warning: debian/rules must be updated to support the 'build-arch' and 'build-indep' targets (at least 'build-arch' seems to be missing) debian/rules build dh_testdir ****************** ** M A K E ** ****************** # Add here commands to compile the package. make patch make[1]: Entering directory `/«PKGBUILDDIR»' mkdir -p bval_dir && rsync -avC src/. ./bval_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370200 bytes received 528 bytes 741456.00 bytes/sec total size is 368430 speedup is 0.99 patch -p 1 -E -d bval_dir < bval.patch && touch bval_dir/patch_stamp patching file Makefile patching file prof.f patching file profPar.f mkdir -p chop_dir && rsync -avC src/. ./chop_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370200 bytes received 528 bytes 741456.00 bytes/sec total size is 368430 speedup is 0.99 patch -p 1 -E -d chop_dir < chop.patch && touch chop_dir/patch_stamp patching file Makefile mkdir -p con_dir && rsync -avC src/. ./con_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370200 bytes received 528 bytes 741456.00 bytes/sec total size is 368430 speedup is 0.99 patch -p 1 -E -d con_dir < con.patch && touch con_dir/patch_stamp patching file Makefile patching file profPar.f mkdir -p isis_dir && rsync -avC src/. ./isis_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370200 bytes received 528 bytes 741456.00 bytes/sec total size is 368430 speedup is 0.99 patch -p 1 -E -d isis_dir < isis.patch && touch isis_dir/patch_stamp patching file Makefile patching file profPar.f mkdir -p md_dir && rsync -avC src/. ./md_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370200 bytes received 528 bytes 741456.00 bytes/sec total size is 368430 speedup is 0.99 patch -p 1 -E -d md_dir < md.patch && touch md_dir/patch_stamp patching file Makefile patching file prof.f patching file profPar.f mkdir -p norsnet_dir && rsync -avC src/. ./norsnet_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370200 bytes received 528 bytes 741456.00 bytes/sec total size is 368430 speedup is 0.99 patch -p 1 -E -d norsnet_dir < norsnet.patch && touch norsnet_dir/patch_stamp patching file Makefile patching file prof.f patching file profPar.f mkdir -p prof_dir && rsync -avC src/. ./prof_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370200 bytes received 528 bytes 741456.00 bytes/sec total size is 368430 speedup is 0.99 patch -p 1 -E -d prof_dir < prof.patch && touch prof_dir/patch_stamp mkdir -p snapfun_dir && rsync -avC src/. ./snapfun_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370200 bytes received 528 bytes 741456.00 bytes/sec total size is 368430 speedup is 0.99 patch -p 1 -E -d snapfun_dir < snapfun.patch && touch snapfun_dir/patch_stamp patching file Makefile patching file Makefile.orig patching file profPar.f make[1]: Leaving directory `/«PKGBUILDDIR»' make make[1]: Entering directory `/«PKGBUILDDIR»' make -C bval_dir make[2]: Entering directory `/«PKGBUILDDIR»/bval_dir' --- making profnet_bval gfortran -o profnet_bval -O3 -Wuninitialized -Wall -Wno-unused prof.f lib-prof.f lib-sys-LINUX.f prof.f:527.28: ERRBINSTOP= 0.95 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) prof.f:1853.24: CALL RDPAR_ERR('NUMIN',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (5/456) at (1) prof.f:1856.24: CALL RDPAR_ERR('NUMHID',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1859.24: CALL RDPAR_ERR('NUMOUT',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1864.24: CALL RDPAR_ERR('NUMSAM',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1870.24: CALL RDPAR_ERR(HC,VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1873.24: CALL RDPAR_ERR(HC,VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1876.24: CALL RDPAR_ERR(HC,VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1879.24: CALL RDPAR_ERR(HC,VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1885.24: CALL RDPAR_ERR('STPSWPMAX',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (9/456) at (1) prof.f:1888.24: CALL RDPAR_ERR('STPMAX',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1891.24: CALL RDPAR_ERR('STPINF',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1334.45: SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) 1 Warning: Unused dummy argument 'numsamloc' at (1) make[2]: Leaving directory `/«PKGBUILDDIR»/bval_dir' make -C chop_dir make[2]: Entering directory `/«PKGBUILDDIR»/chop_dir' --- making profnet_chop gfortran -o profnet_chop -O3 -fbounds-check -Wuninitialized -Wall -Wno-unused prof.f lib-prof.f lib-sys-LINUX.f prof.f:527.28: ERRBINSTOP= 0.95 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) prof.f:1853.24: CALL RDPAR_ERR('NUMIN ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1856.24: CALL RDPAR_ERR('NUMHID ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1859.24: CALL RDPAR_ERR('NUMOUT ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1864.24: CALL RDPAR_ERR('NUMSAM ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1870.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1873.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1876.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1879.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1885.24: CALL RDPAR_ERR('STPSWPMAX ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) prof.f:1888.24: CALL RDPAR_ERR('STPMAX ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1891.24: CALL RDPAR_ERR('STPINF ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1334.45: SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) 1 Warning: Unused dummy argument 'numsamloc' at (1) make[2]: Leaving directory `/«PKGBUILDDIR»/chop_dir' make -C con_dir make[2]: Entering directory `/«PKGBUILDDIR»/con_dir' --- making profnet_con gfortran -o profnet_con -O3 -fbounds-check -Wuninitialized -Wall -Wno-unused prof.f lib-prof.f lib-sys-LINUX.f prof.f:527.28: ERRBINSTOP= 0.95 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) prof.f:1853.24: CALL RDPAR_ERR('NUMIN ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1856.24: CALL RDPAR_ERR('NUMHID ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1859.24: CALL RDPAR_ERR('NUMOUT ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1864.24: CALL RDPAR_ERR('NUMSAM ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1870.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1873.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1876.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1879.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1885.24: CALL RDPAR_ERR('STPSWPMAX ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) prof.f:1888.24: CALL RDPAR_ERR('STPMAX ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1891.24: CALL RDPAR_ERR('STPINF ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1334.45: SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) 1 Warning: Unused dummy argument 'numsamloc' at (1) make[2]: Leaving directory `/«PKGBUILDDIR»/con_dir' make -C isis_dir make[2]: Entering directory `/«PKGBUILDDIR»/isis_dir' --- making profnet_isis gfortran -o profnet_isis -O3 -Wuninitialized -Wall -Wno-unused prof.f lib-prof.f lib-sys-LINUX.f prof.f:527.28: ERRBINSTOP= 0.95 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) prof.f:1853.24: CALL RDPAR_ERR('NUMIN ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1856.24: CALL RDPAR_ERR('NUMHID ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1859.24: CALL RDPAR_ERR('NUMOUT ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1864.24: CALL RDPAR_ERR('NUMSAM ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1870.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1873.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1876.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1879.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1885.24: CALL RDPAR_ERR('STPSWPMAX ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) prof.f:1888.24: CALL RDPAR_ERR('STPMAX ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1891.24: CALL RDPAR_ERR('STPINF ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1334.45: SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) 1 Warning: Unused dummy argument 'numsamloc' at (1) make[2]: Leaving directory `/«PKGBUILDDIR»/isis_dir' make -C md_dir make[2]: Entering directory `/«PKGBUILDDIR»/md_dir' --- making profnet_md gfortran -o profnet_md -O3 -Wuninitialized -Wall -Wno-unused prof.f lib-prof.f lib-sys-LINUX.f prof.f:527.28: ERRBINSTOP= 0.95 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) prof.f:1853.24: CALL RDPAR_ERR('NUMIN',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (5/456) at (1) prof.f:1856.24: CALL RDPAR_ERR('NUMHID',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1859.24: CALL RDPAR_ERR('NUMOUT',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1864.24: CALL RDPAR_ERR('NUMSAM',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1870.24: CALL RDPAR_ERR(HC,VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1873.24: CALL RDPAR_ERR(HC,VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1876.24: CALL RDPAR_ERR(HC,VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1879.24: CALL RDPAR_ERR(HC,VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1885.24: CALL RDPAR_ERR('STPSWPMAX',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (9/456) at (1) prof.f:1888.24: CALL RDPAR_ERR('STPMAX',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1891.24: CALL RDPAR_ERR('STPINF',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1334.45: SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) 1 Warning: Unused dummy argument 'numsamloc' at (1) make[2]: Leaving directory `/«PKGBUILDDIR»/md_dir' make -C norsnet_dir make[2]: Entering directory `/«PKGBUILDDIR»/norsnet_dir' --- making profnet_norsnet gfortran -o profnet_norsnet -O3 -Wuninitialized -Wall -Wno-unused prof.f lib-prof.f lib-sys-LINUX.f prof.f:527.28: ERRBINSTOP= 0.95 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) prof.f:1853.24: CALL RDPAR_ERR('NUMIN',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (5/456) at (1) prof.f:1856.24: CALL RDPAR_ERR('NUMHID',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1859.24: CALL RDPAR_ERR('NUMOUT',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1864.24: CALL RDPAR_ERR('NUMSAM',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1870.24: CALL RDPAR_ERR(HC,VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1873.24: CALL RDPAR_ERR(HC,VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1876.24: CALL RDPAR_ERR(HC,VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1879.24: CALL RDPAR_ERR(HC,VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1885.24: CALL RDPAR_ERR('STPSWPMAX',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (9/456) at (1) prof.f:1888.24: CALL RDPAR_ERR('STPMAX',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1891.24: CALL RDPAR_ERR('STPINF',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1334.45: SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) 1 Warning: Unused dummy argument 'numsamloc' at (1) make[2]: Leaving directory `/«PKGBUILDDIR»/norsnet_dir' make -C prof_dir make[2]: Entering directory `/«PKGBUILDDIR»/prof_dir' --- making profnet_prof gfortran -o profnet_prof -O3 -fbounds-check -Wuninitialized -Wall -Wno-unused prof.f lib-prof.f lib-sys-LINUX.f prof.f:527.28: ERRBINSTOP= 0.95 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) prof.f:1853.24: CALL RDPAR_ERR('NUMIN ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1856.24: CALL RDPAR_ERR('NUMHID ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1859.24: CALL RDPAR_ERR('NUMOUT ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1864.24: CALL RDPAR_ERR('NUMSAM ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1870.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1873.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1876.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1879.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1885.24: CALL RDPAR_ERR('STPSWPMAX ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) prof.f:1888.24: CALL RDPAR_ERR('STPMAX ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1891.24: CALL RDPAR_ERR('STPINF ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1334.45: SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) 1 Warning: Unused dummy argument 'numsamloc' at (1) make[2]: Leaving directory `/«PKGBUILDDIR»/prof_dir' make -C snapfun_dir make[2]: Entering directory `/«PKGBUILDDIR»/snapfun_dir' --- making profnet_snapfun gfortran -o profnet_snapfun -O3 -fbounds-check -Wuninitialized -Wall -Wno-unused prof.f lib-prof.f lib-sys-LINUX.f prof.f:527.28: ERRBINSTOP= 0.95 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) prof.f:1853.24: CALL RDPAR_ERR('NUMIN ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1856.24: CALL RDPAR_ERR('NUMHID ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1859.24: CALL RDPAR_ERR('NUMOUT ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1864.24: CALL RDPAR_ERR('NUMSAM ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1870.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1873.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1876.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1879.24: CALL RDPAR_ERR(HC // ' ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1885.24: CALL RDPAR_ERR('STPSWPMAX ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) prof.f:1888.24: CALL RDPAR_ERR('STPMAX ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1891.24: CALL RDPAR_ERR('STPINF ',VARIN) 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1334.45: SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) 1 Warning: Unused dummy argument 'numsamloc' at (1) make[2]: Leaving directory `/«PKGBUILDDIR»/snapfun_dir' pod2man -c 'User Commands' -r "1.0.21-" profnet.pod | gzip -c > profnet.1.gz make -C src-phd make[2]: Entering directory `/«PKGBUILDDIR»/src-phd' gfortran -O3 -fbounds-check -Wall -o profphd_net phd.f lib-phd.f phd.f:8107.5: 19991 CONTINUE 1 Warning: Label 19991 at (1) defined but not used phd.f:1437.40: CHARACTER*1 FC_REXP_TO_3STCHAR,FC_REXPI_TO_3STCHAR 1 Warning: Unused variable 'fc_rexp_to_3stchar' declared at (1) phd.f:3923.30: + ACC,NOCC,VAR,ALISEQ,ALIPOINTER, 1 Warning: Unused dummy argument 'aliseq' at (1) phd.f:3922.58: + PDBNO,PDBSEQ,CHAINID,SECSTR,COLS,SHEETLABEL,BP1,BP2, 1 Warning: Unused dummy argument 'bp1' at (1) phd.f:3922.62: + PDBNO,PDBSEQ,CHAINID,SECSTR,COLS,SHEETLABEL,BP1,BP2, 1 Warning: Unused dummy argument 'bp2' at (1) phd.f:3924.36: + SEQPROF,NDEL,NINS,ENTROPY,RELENT,CONSWEIGHT, 1 Warning: Unused dummy argument 'entropy' at (1) phd.f:3916.31: + MAXRES,MAXALIGNS_LOC,MAXCORE_LOC, 1 Warning: Unused dummy argument 'maxaligns_loc' at (1) phd.f:3916.43: + MAXRES,MAXALIGNS_LOC,MAXCORE_LOC, 1 Warning: Unused dummy argument 'maxcore_loc' at (1) phd.f:3916.17: + MAXRES,MAXALIGNS_LOC,MAXCORE_LOC, 1 Warning: Unused dummy argument 'maxres' at (1) phd.f:3924.43: + SEQPROF,NDEL,NINS,ENTROPY,RELENT,CONSWEIGHT, 1 Warning: Unused dummy argument 'relent' at (1) phd.f:3922.54: + PDBNO,PDBSEQ,CHAINID,SECSTR,COLS,SHEETLABEL,BP1,BP2, 1 Warning: Unused dummy argument 'sheetlabel' at (1) phd.f:3923.23: + ACC,NOCC,VAR,ALISEQ,ALIPOINTER, 1 Warning: Unused dummy argument 'var' at (1) phd.f:64.41: REAL TIME0,FRTIME_SECNDS 1 Warning: Unused variable 'frtime_secnds' declared at (1) make[2]: Leaving directory `/«PKGBUILDDIR»/src-phd' make[1]: Leaving directory `/«PKGBUILDDIR»' #docbook-to-man debian/profnet.sgml > profnet.1 touch build-stamp fakeroot debian/rules binary-arch dh_testdir dh_testroot dh_prep dh_installdirs ******************* ** I N S T A L L ** ******************* # Add here commands to install the package into debian/profnet. /usr/bin/make DESTDIR=/«PKGBUILDDIR»/debian/profnet-bval prefix=/usr install-bval make[1]: Entering directory `/«PKGBUILDDIR»' mkdir -p /«PKGBUILDDIR»/debian/profnet-bval/usr/bin && \ cp -a bval_dir/profnet_bval \ /«PKGBUILDDIR»/debian/profnet-bval/usr/bin/ mkdir -p /«PKGBUILDDIR»/debian/profnet-bval/usr/share/man/man1 && cp profnet.1.gz /«PKGBUILDDIR»/debian/profnet-bval/usr/share/man/man1/profnet_bval.1.gz make[1]: Leaving directory `/«PKGBUILDDIR»' /usr/bin/make DESTDIR=/«PKGBUILDDIR»/debian/profnet-chop prefix=/usr install-chop make[1]: Entering directory `/«PKGBUILDDIR»' mkdir -p /«PKGBUILDDIR»/debian/profnet-chop/usr/bin && \ cp -a chop_dir/profnet_chop \ /«PKGBUILDDIR»/debian/profnet-chop/usr/bin/ mkdir -p /«PKGBUILDDIR»/debian/profnet-chop/usr/share/man/man1 && cp profnet.1.gz /«PKGBUILDDIR»/debian/profnet-chop/usr/share/man/man1/profnet_chop.1.gz make[1]: Leaving directory `/«PKGBUILDDIR»' /usr/bin/make DESTDIR=/«PKGBUILDDIR»/debian/profnet-con prefix=/usr install-con make[1]: Entering directory `/«PKGBUILDDIR»' mkdir -p /«PKGBUILDDIR»/debian/profnet-con/usr/bin && \ cp -a con_dir/profnet_con \ /«PKGBUILDDIR»/debian/profnet-con/usr/bin/ mkdir -p /«PKGBUILDDIR»/debian/profnet-con/usr/share/man/man1 && cp profnet.1.gz /«PKGBUILDDIR»/debian/profnet-con/usr/share/man/man1/profnet_con.1.gz make[1]: Leaving directory `/«PKGBUILDDIR»' /usr/bin/make DESTDIR=/«PKGBUILDDIR»/debian/profnet-isis prefix=/usr install-isis make[1]: Entering directory `/«PKGBUILDDIR»' mkdir -p /«PKGBUILDDIR»/debian/profnet-isis/usr/bin && \ cp -a isis_dir/profnet_isis \ /«PKGBUILDDIR»/debian/profnet-isis/usr/bin/ mkdir -p /«PKGBUILDDIR»/debian/profnet-isis/usr/share/man/man1 && cp profnet.1.gz /«PKGBUILDDIR»/debian/profnet-isis/usr/share/man/man1/profnet_isis.1.gz make[1]: Leaving directory `/«PKGBUILDDIR»' /usr/bin/make DESTDIR=/«PKGBUILDDIR»/debian/profnet-md prefix=/usr install-md make[1]: Entering directory `/«PKGBUILDDIR»' mkdir -p /«PKGBUILDDIR»/debian/profnet-md/usr/bin && \ cp -a md_dir/profnet_md \ /«PKGBUILDDIR»/debian/profnet-md/usr/bin/ mkdir -p /«PKGBUILDDIR»/debian/profnet-md/usr/share/man/man1 && cp profnet.1.gz /«PKGBUILDDIR»/debian/profnet-md/usr/share/man/man1/profnet_md.1.gz make[1]: Leaving directory `/«PKGBUILDDIR»' /usr/bin/make DESTDIR=/«PKGBUILDDIR»/debian/profnet-norsnet prefix=/usr install-norsnet make[1]: Entering directory `/«PKGBUILDDIR»' mkdir -p /«PKGBUILDDIR»/debian/profnet-norsnet/usr/bin && \ cp -a norsnet_dir/profnet_norsnet \ /«PKGBUILDDIR»/debian/profnet-norsnet/usr/bin/ mkdir -p /«PKGBUILDDIR»/debian/profnet-norsnet/usr/share/man/man1 && cp profnet.1.gz /«PKGBUILDDIR»/debian/profnet-norsnet/usr/share/man/man1/profnet_norsnet.1.gz make[1]: Leaving directory `/«PKGBUILDDIR»' /usr/bin/make DESTDIR=/«PKGBUILDDIR»/debian/profnet-prof prefix=/usr install-prof make[1]: Entering directory `/«PKGBUILDDIR»' mkdir -p /«PKGBUILDDIR»/debian/profnet-prof/usr/bin && \ cp -a prof_dir/profnet_prof \ /«PKGBUILDDIR»/debian/profnet-prof/usr/bin/ mkdir -p /«PKGBUILDDIR»/debian/profnet-prof/usr/share/man/man1 && cp profnet.1.gz /«PKGBUILDDIR»/debian/profnet-prof/usr/share/man/man1/profnet_prof.1.gz make[1]: Leaving directory `/«PKGBUILDDIR»' /usr/bin/make DESTDIR=/«PKGBUILDDIR»/debian/profnet-snapfun prefix=/usr install-snapfun make[1]: Entering directory `/«PKGBUILDDIR»' mkdir -p /«PKGBUILDDIR»/debian/profnet-snapfun/usr/bin && \ cp -a snapfun_dir/profnet_snapfun \ /«PKGBUILDDIR»/debian/profnet-snapfun/usr/bin/ mkdir -p /«PKGBUILDDIR»/debian/profnet-snapfun/usr/share/man/man1 && cp profnet.1.gz /«PKGBUILDDIR»/debian/profnet-snapfun/usr/share/man/man1/profnet_snapfun.1.gz make[1]: Leaving directory `/«PKGBUILDDIR»' /usr/bin/make DESTDIR=/«PKGBUILDDIR»/debian/profphd-net prefix=/usr install-phd make[1]: Entering directory `/«PKGBUILDDIR»' /usr/bin/make -C src-phd install make[2]: Entering directory `/«PKGBUILDDIR»/src-phd' mkdir -p /«PKGBUILDDIR»/debian/profphd-net/usr/bin && \ cp profphd_net /«PKGBUILDDIR»/debian/profphd-net/usr/bin/ rm -f /«PKGBUILDDIR»/debian/profphd-net/usr/bin/phd1994 && ln -s profphd_net /«PKGBUILDDIR»/debian/profphd-net/usr/bin/phd1994 make[2]: Leaving directory `/«PKGBUILDDIR»/src-phd' mkdir -p /«PKGBUILDDIR»/debian/profphd-net/usr/share/man/man1 && cp profnet.1.gz /«PKGBUILDDIR»/debian/profphd-net/usr/share/man/man1/profphd_net.1.gz rm -f /«PKGBUILDDIR»/debian/profphd-net/usr/share/man/man1/phd1994.1.gz && ln -s profphd_net.1.gz /«PKGBUILDDIR»/debian/profphd-net/usr/share/man/man1/phd1994.1.gz make[1]: Leaving directory `/«PKGBUILDDIR»' dh_testdir dh_testroot dh_installchangelogs ChangeLog dh_installdocs dh_installexamples dh_installman dh_link dh_strip --dbg-package=profnet-dbg dh_compress dh_fixperms dh_installdeb dh_shlibdeps dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/profphd-net/usr/bin/profphd_net was not linked against libgcc_s.so.1 (it uses none of the library's symbols) for i in $(sed -n '/^Package:/s/^.* //p' debian/control); do \ cat debian/substvars >> debian/$i.substvars; \ done; dh_gencontrol dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dh_md5sums dh_builddeb dpkg-deb: building package `profnet-bval' in `../profnet-bval_1.0.21-1+wheezy1_armhf.deb'. dpkg-deb: building package `profnet-chop' in `../profnet-chop_1.0.21-1+wheezy1_armhf.deb'. dpkg-deb: building package `profnet-con' in `../profnet-con_1.0.21-1+wheezy1_armhf.deb'. dpkg-deb: building package `profnet-isis' in `../profnet-isis_1.0.21-1+wheezy1_armhf.deb'. dpkg-deb: building package `profnet-md' in `../profnet-md_1.0.21-1+wheezy1_armhf.deb'. dpkg-deb: building package `profnet-norsnet' in `../profnet-norsnet_1.0.21-1+wheezy1_armhf.deb'. dpkg-deb: building package `profnet-prof' in `../profnet-prof_1.0.21-1+wheezy1_armhf.deb'. dpkg-deb: building package `profnet-snapfun' in `../profnet-snapfun_1.0.21-1+wheezy1_armhf.deb'. dpkg-deb: building package `profphd-net' in `../profphd-net_1.0.21-1+wheezy1_armhf.deb'. dpkg-deb: building package `profnet-dbg' in `../profnet-dbg_1.0.21-1+wheezy1_armhf.deb'. dpkg-genchanges -B -mbuildd >../profnet_1.0.21-1+wheezy1_armhf.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build profnet-1.0.21 dpkg-buildpackage: binary only upload (no source included) ──────────────────────────────────────────────────────────────────────────────── Build finished at 20130615-0954 Finished ──────── I: Built successfully ┌──────────────────────────────────────────────────────────────────────────────┐ │ Changes │ └──────────────────────────────────────────────────────────────────────────────┘ profnet_1.0.21-1+wheezy1_armhf.changes: ─────────────────────────────────────── Format: 1.8 Date: Sat, 11 May 2013 22:37:45 +0200 Source: profnet Binary: profnet-bval profnet-chop profnet-con profnet-isis profnet-md profnet-norsnet profnet-prof profnet-snapfun profphd-net profnet-dbg Architecture: armhf Version: 1.0.21-1+wheezy1 Distribution: wheezy-staging Urgency: low Maintainer: buildd Changed-By: Laszlo Kajan Description: profnet-bval - neural network architecture for profbval profnet-chop - neural network architecture for profchop profnet-con - neural network architecture for profcon profnet-dbg - debug files for profnet packages profnet-isis - neural network architecture for profisis profnet-md - neural network architecture for metadisorder profnet-norsnet - neural network architecture for norsnet profnet-prof - neural network architecture for profacc profnet-snapfun - neural network architecture for snapfun profphd-net - neural network architecture for profphd Closes: 707874 Changes: profnet (1.0.21-1+wheezy1) stable-proposed-updates; urgency=low . * Fixed Fortran runtime error (Actual string length is shorter than the declared one for dummy argument) in profnet-isis with a new quilt patch. (Closes: #707874) * Fixed Debian build issue: now builds twice in a row. Checksums-Sha1: 8dfa4d2357d9b57be806eb38cf98e43e2dab4655 47252 profnet-bval_1.0.21-1+wheezy1_armhf.deb 1c5573b7fae838a35613d0d6c816acaab8ad4cd3 58484 profnet-chop_1.0.21-1+wheezy1_armhf.deb ec560fc40fb66f1581c9f99bdf7ceddbd1eb2ac2 56892 profnet-con_1.0.21-1+wheezy1_armhf.deb be82df7cff09ed92b724dc45b225f02740fee234 46360 profnet-isis_1.0.21-1+wheezy1_armhf.deb 940de75b769c59be1a1cf2db37d55b89d946ac06 46252 profnet-md_1.0.21-1+wheezy1_armhf.deb 1f56c4e939ca9cb275213c0335425e6eaa61b0f9 46250 profnet-norsnet_1.0.21-1+wheezy1_armhf.deb 29423eeaf9f487fdddab812a9f0104b9a14f0b5c 58488 profnet-prof_1.0.21-1+wheezy1_armhf.deb 8343e03a52e8ce9c7f68635fc7a71355fbc885dd 55056 profnet-snapfun_1.0.21-1+wheezy1_armhf.deb 3ac299572ce6c14f4153c2b1e7bcf9cd4214e36e 177502 profphd-net_1.0.21-1+wheezy1_armhf.deb 49539582457befc092d97a77f7a42c29533c9486 25884 profnet-dbg_1.0.21-1+wheezy1_armhf.deb Checksums-Sha256: c7f1b266bbe5de30f9cbafccd0f330a119d34ae3fab567044ca3b4c2bc8ac1d7 47252 profnet-bval_1.0.21-1+wheezy1_armhf.deb 3bb241d7f34aa16ddba000b789b678d8a77d3977f66ea71538cb1e7b252afb00 58484 profnet-chop_1.0.21-1+wheezy1_armhf.deb 6632342d058e9f0ba2241b2d5f49686bde1c3c5988945e8d0e54e45c15403388 56892 profnet-con_1.0.21-1+wheezy1_armhf.deb ef06f2c0f8f5e4e5fc864afdb8c3f3db1b61764f361e48be467cda74378e37be 46360 profnet-isis_1.0.21-1+wheezy1_armhf.deb 61f0a733b4465e8e2619836de6bd04b101752dd828a5efdf9f3a2c92504461b7 46252 profnet-md_1.0.21-1+wheezy1_armhf.deb 60a17f1abca94d52f067ebdc994d7ddde759463268b2091b5d6b3734140357f0 46250 profnet-norsnet_1.0.21-1+wheezy1_armhf.deb f9ee664118a6bc00da356586758fecee66d78be621156f2913d015614f67e3d5 58488 profnet-prof_1.0.21-1+wheezy1_armhf.deb e8f0867bfdee588515285e3ddbc4084eb4e950f66c8a3e6c45b181e4eede5e26 55056 profnet-snapfun_1.0.21-1+wheezy1_armhf.deb 7ee835712753526013469f90affffa67ff03d471600a50ba8eae3acd8a405684 177502 profphd-net_1.0.21-1+wheezy1_armhf.deb f46f97290488904a9a62adf54c6061e73b3bb37ab10399e6151e76ed20ee910f 25884 profnet-dbg_1.0.21-1+wheezy1_armhf.deb Files: 4a33d4a992fa1655f2c076f0323bad0b 47252 science extra profnet-bval_1.0.21-1+wheezy1_armhf.deb 01875b8ecf88ee4db382f379d9bcded5 58484 science extra profnet-chop_1.0.21-1+wheezy1_armhf.deb 1fcfc344cc8db02d8f8004c8f4054789 56892 science extra profnet-con_1.0.21-1+wheezy1_armhf.deb 5f0833bd41f5d159cdc2c864ac4e8974 46360 science extra profnet-isis_1.0.21-1+wheezy1_armhf.deb 35bfcaf56dc6cbcf04b0a2b9cfc74f97 46252 science extra profnet-md_1.0.21-1+wheezy1_armhf.deb 7a17c24981ceceb18b653b54fcc109de 46250 science extra profnet-norsnet_1.0.21-1+wheezy1_armhf.deb 4bc1479421ad8449f3a2627d024c4153 58488 science extra profnet-prof_1.0.21-1+wheezy1_armhf.deb 402f3fa5f8372575d47e678943ee6342 55056 science extra profnet-snapfun_1.0.21-1+wheezy1_armhf.deb b6dab7d358743cfa610f810fd8d6f6aa 177502 science extra profphd-net_1.0.21-1+wheezy1_armhf.deb a5ccea04970345d7a79ba768899c63b7 25884 debug extra profnet-dbg_1.0.21-1+wheezy1_armhf.deb ┌──────────────────────────────────────────────────────────────────────────────┐ │ Package contents │ └──────────────────────────────────────────────────────────────────────────────┘ profnet-bval_1.0.21-1+wheezy1_armhf.deb ─────────────────────────────────────── new debian package, version 2.0. size 47252 bytes: control archive=847 bytes. 833 bytes, 18 lines control 427 bytes, 6 lines md5sums Package: profnet-bval Source: profnet Version: 1.0.21-1+wheezy1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 127 Depends: libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libgfortran3 (>= 4.6) Recommends: profbval Section: science Priority: extra Homepage: http://www.predictprotein.org/ Description: neural network architecture for profbval Profnet is a component of the prediction methods that make up the Predict Protein service by the lab of Burkhard Rost. It provides the neural network component to a variety of predictors that perform protein feature prediction directly from sequence. This neural network implementation has to be compiled for every different network architecture. This package contains the neural network architecture for profbval. drwxr-xr-x root/root 0 2013-06-15 09:53 ./ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/man1/ -rw-r--r-- root/root 2635 2013-06-15 09:53 ./usr/share/man/man1/profnet_bval.1.gz drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/profnet-bval/ -rw-r--r-- root/root 1320 2011-06-21 07:14 ./usr/share/doc/profnet-bval/changelog.gz -rw-r--r-- root/root 999 2013-05-21 04:31 ./usr/share/doc/profnet-bval/changelog.Debian.gz -rw-r--r-- root/root 1914 2011-07-09 03:02 ./usr/share/doc/profnet-bval/copyright -rw-r--r-- root/root 1960 2011-06-16 06:20 ./usr/share/doc/profnet-bval/README.Debian drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/bin/ -rwxr-xr-x root/root 83948 2013-06-15 09:53 ./usr/bin/profnet_bval profnet-chop_1.0.21-1+wheezy1_armhf.deb ─────────────────────────────────────── new debian package, version 2.0. size 58484 bytes: control archive=811 bytes. 833 bytes, 18 lines control 352 bytes, 5 lines md5sums Package: profnet-chop Source: profnet Version: 1.0.21-1+wheezy1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 159 Depends: libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libgfortran3 (>= 4.6) Recommends: profchop Section: science Priority: extra Homepage: http://www.predictprotein.org/ Description: neural network architecture for profchop Profnet is a component of the prediction methods that make up the Predict Protein service by the lab of Burkhard Rost. It provides the neural network component to a variety of predictors that perform protein feature prediction directly from sequence. This neural network implementation has to be compiled for every different network architecture. This package contains the neural network architecture for profchop. drwxr-xr-x root/root 0 2013-06-15 09:53 ./ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/man1/ -rw-r--r-- root/root 2635 2013-06-15 09:53 ./usr/share/man/man1/profnet_chop.1.gz drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/profnet-chop/ -rw-r--r-- root/root 1320 2011-06-21 07:14 ./usr/share/doc/profnet-chop/changelog.gz -rw-r--r-- root/root 999 2013-05-21 04:31 ./usr/share/doc/profnet-chop/changelog.Debian.gz -rw-r--r-- root/root 1914 2011-07-09 03:02 ./usr/share/doc/profnet-chop/copyright drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/bin/ -rwxr-xr-x root/root 118684 2013-06-15 09:53 ./usr/bin/profnet_chop profnet-con_1.0.21-1+wheezy1_armhf.deb ────────────────────────────────────── new debian package, version 2.0. size 56892 bytes: control archive=812 bytes. 829 bytes, 18 lines control 347 bytes, 5 lines md5sums Package: profnet-con Source: profnet Version: 1.0.21-1+wheezy1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 157 Depends: libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libgfortran3 (>= 4.6) Recommends: profcon Section: science Priority: extra Homepage: http://www.predictprotein.org/ Description: neural network architecture for profcon Profnet is a component of the prediction methods that make up the Predict Protein service by the lab of Burkhard Rost. It provides the neural network component to a variety of predictors that perform protein feature prediction directly from sequence. This neural network implementation has to be compiled for every different network architecture. This package contains the neural network architecture for profcon. drwxr-xr-x root/root 0 2013-06-15 09:53 ./ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/man1/ -rw-r--r-- root/root 2635 2013-06-15 09:53 ./usr/share/man/man1/profnet_con.1.gz drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/profnet-con/ -rw-r--r-- root/root 1320 2011-06-21 07:14 ./usr/share/doc/profnet-con/changelog.gz -rw-r--r-- root/root 999 2013-05-21 04:31 ./usr/share/doc/profnet-con/changelog.Debian.gz -rw-r--r-- root/root 1914 2011-07-09 03:02 ./usr/share/doc/profnet-con/copyright drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/bin/ -rwxr-xr-x root/root 116596 2013-06-15 09:53 ./usr/bin/profnet_con profnet-isis_1.0.21-1+wheezy1_armhf.deb ─────────────────────────────────────── new debian package, version 2.0. size 46360 bytes: control archive=813 bytes. 833 bytes, 18 lines control 352 bytes, 5 lines md5sums Package: profnet-isis Source: profnet Version: 1.0.21-1+wheezy1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 126 Depends: libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libgfortran3 (>= 4.6) Recommends: profisis Section: science Priority: extra Homepage: http://www.predictprotein.org/ Description: neural network architecture for profisis Profnet is a component of the prediction methods that make up the Predict Protein service by the lab of Burkhard Rost. It provides the neural network component to a variety of predictors that perform protein feature prediction directly from sequence. This neural network implementation has to be compiled for every different network architecture. This package contains the neural network architecture for profisis. drwxr-xr-x root/root 0 2013-06-15 09:53 ./ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/man1/ -rw-r--r-- root/root 2635 2013-06-15 09:53 ./usr/share/man/man1/profnet_isis.1.gz drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/profnet-isis/ -rw-r--r-- root/root 1320 2011-06-21 07:14 ./usr/share/doc/profnet-isis/changelog.gz -rw-r--r-- root/root 999 2013-05-21 04:31 ./usr/share/doc/profnet-isis/changelog.Debian.gz -rw-r--r-- root/root 1914 2011-07-09 03:02 ./usr/share/doc/profnet-isis/copyright drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/bin/ -rwxr-xr-x root/root 84376 2013-06-15 09:53 ./usr/bin/profnet_isis profnet-md_1.0.21-1+wheezy1_armhf.deb ───────────────────────────────────── new debian package, version 2.0. size 46252 bytes: control archive=817 bytes. 843 bytes, 18 lines control 342 bytes, 5 lines md5sums Package: profnet-md Source: profnet Version: 1.0.21-1+wheezy1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 125 Depends: libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libgfortran3 (>= 4.6) Recommends: metadisorder Section: science Priority: extra Homepage: http://www.predictprotein.org/ Description: neural network architecture for metadisorder Profnet is a component of the prediction methods that make up the Predict Protein service by the lab of Burkhard Rost. It provides the neural network component to a variety of predictors that perform protein feature prediction directly from sequence. This neural network implementation has to be compiled for every different network architecture. This package contains the neural network architecture for metadisorder. drwxr-xr-x root/root 0 2013-06-15 09:53 ./ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/man1/ -rw-r--r-- root/root 2635 2013-06-15 09:53 ./usr/share/man/man1/profnet_md.1.gz drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/profnet-md/ -rw-r--r-- root/root 1320 2011-06-21 07:14 ./usr/share/doc/profnet-md/changelog.gz -rw-r--r-- root/root 999 2013-05-21 04:31 ./usr/share/doc/profnet-md/changelog.Debian.gz -rw-r--r-- root/root 1914 2011-07-09 03:02 ./usr/share/doc/profnet-md/copyright drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/bin/ -rwxr-xr-x root/root 83972 2013-06-15 09:53 ./usr/bin/profnet_md profnet-norsnet_1.0.21-1+wheezy1_armhf.deb ────────────────────────────────────────── new debian package, version 2.0. size 46250 bytes: control archive=813 bytes. 833 bytes, 18 lines control 367 bytes, 5 lines md5sums Package: profnet-norsnet Source: profnet Version: 1.0.21-1+wheezy1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 125 Depends: libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libgfortran3 (>= 4.6) Recommends: norsnet Section: science Priority: extra Homepage: http://www.predictprotein.org/ Description: neural network architecture for norsnet Profnet is a component of the prediction methods that make up the Predict Protein service by the lab of Burkhard Rost. It provides the neural network component to a variety of predictors that perform protein feature prediction directly from sequence. This neural network implementation has to be compiled for every different network architecture. This package contains the neural network architecture for norsnet. drwxr-xr-x root/root 0 2013-06-15 09:53 ./ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/man1/ -rw-r--r-- root/root 2635 2013-06-15 09:53 ./usr/share/man/man1/profnet_norsnet.1.gz drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/profnet-norsnet/ -rw-r--r-- root/root 1320 2011-06-21 07:14 ./usr/share/doc/profnet-norsnet/changelog.gz -rw-r--r-- root/root 999 2013-05-21 04:31 ./usr/share/doc/profnet-norsnet/changelog.Debian.gz -rw-r--r-- root/root 1914 2011-07-09 03:02 ./usr/share/doc/profnet-norsnet/copyright drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/bin/ -rwxr-xr-x root/root 83948 2013-06-15 09:53 ./usr/bin/profnet_norsnet profnet-prof_1.0.21-1+wheezy1_armhf.deb ─────────────────────────────────────── new debian package, version 2.0. size 58488 bytes: control archive=821 bytes. 842 bytes, 18 lines control 352 bytes, 5 lines md5sums Package: profnet-prof Source: profnet Version: 1.0.21-1+wheezy1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 159 Depends: libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libgfortran3 (>= 4.6) Recommends: profphd Section: science Priority: extra Homepage: http://www.predictprotein.org/ Description: neural network architecture for profacc Profnet is a component of the prediction methods that make up the Predict Protein service by the lab of Burkhard Rost. It provides the neural network component to a variety of predictors that perform protein feature prediction directly from sequence. This neural network implementation has to be compiled for every different network architecture. This package contains the neural network architecture for profsec and profacc. drwxr-xr-x root/root 0 2013-06-15 09:53 ./ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/man1/ -rw-r--r-- root/root 2635 2013-06-15 09:53 ./usr/share/man/man1/profnet_prof.1.gz drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/profnet-prof/ -rw-r--r-- root/root 1320 2011-06-21 07:14 ./usr/share/doc/profnet-prof/changelog.gz -rw-r--r-- root/root 999 2013-05-21 04:31 ./usr/share/doc/profnet-prof/changelog.Debian.gz -rw-r--r-- root/root 1914 2011-07-09 03:02 ./usr/share/doc/profnet-prof/copyright drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/bin/ -rwxr-xr-x root/root 118684 2013-06-15 09:53 ./usr/bin/profnet_prof profnet-snapfun_1.0.21-1+wheezy1_armhf.deb ────────────────────────────────────────── new debian package, version 2.0. size 55056 bytes: control archive=815 bytes. 833 bytes, 18 lines control 367 bytes, 5 lines md5sums Package: profnet-snapfun Source: profnet Version: 1.0.21-1+wheezy1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 150 Depends: libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libgfortran3 (>= 4.6) Recommends: snapfun Section: science Priority: extra Homepage: http://www.predictprotein.org/ Description: neural network architecture for snapfun Profnet is a component of the prediction methods that make up the Predict Protein service by the lab of Burkhard Rost. It provides the neural network component to a variety of predictors that perform protein feature prediction directly from sequence. This neural network implementation has to be compiled for every different network architecture. This package contains the neural network architecture for snapfun. drwxr-xr-x root/root 0 2013-06-15 09:53 ./ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/man1/ -rw-r--r-- root/root 2635 2013-06-15 09:53 ./usr/share/man/man1/profnet_snapfun.1.gz drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/profnet-snapfun/ -rw-r--r-- root/root 1320 2011-06-21 07:14 ./usr/share/doc/profnet-snapfun/changelog.gz -rw-r--r-- root/root 999 2013-05-21 04:31 ./usr/share/doc/profnet-snapfun/changelog.Debian.gz -rw-r--r-- root/root 1914 2011-07-09 03:02 ./usr/share/doc/profnet-snapfun/copyright drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/bin/ -rwxr-xr-x root/root 109824 2013-06-15 09:53 ./usr/bin/profnet_snapfun profphd-net_1.0.21-1+wheezy1_armhf.deb ────────────────────────────────────── new debian package, version 2.0. size 177502 bytes: control archive=813 bytes. 829 bytes, 18 lines control 347 bytes, 5 lines md5sums Package: profphd-net Source: profnet Version: 1.0.21-1+wheezy1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 449 Depends: libc6 (>= 2.13-28), libgcc1 (>= 1:4.1.1), libgfortran3 (>= 4.6) Recommends: profphd Section: science Priority: extra Homepage: http://www.predictprotein.org/ Description: neural network architecture for profphd Profnet is a component of the prediction methods that make up the Predict Protein service by the lab of Burkhard Rost. It provides the neural network component to a variety of predictors that perform protein feature prediction directly from sequence. This neural network implementation has to be compiled for every different network architecture. This package contains the neural network architecture for profphd. drwxr-xr-x root/root 0 2013-06-15 09:53 ./ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/man/man1/ -rw-r--r-- root/root 2635 2013-06-15 09:53 ./usr/share/man/man1/profphd_net.1.gz drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/profphd-net/ -rw-r--r-- root/root 1320 2011-06-21 07:14 ./usr/share/doc/profphd-net/changelog.gz -rw-r--r-- root/root 999 2013-05-21 04:31 ./usr/share/doc/profphd-net/changelog.Debian.gz -rw-r--r-- root/root 1914 2011-07-09 03:02 ./usr/share/doc/profphd-net/copyright drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/bin/ -rwxr-xr-x root/root 415608 2013-06-15 09:53 ./usr/bin/profphd_net lrwxrwxrwx root/root 0 2013-06-15 09:53 ./usr/share/man/man1/phd1994.1.gz -> profphd_net.1.gz lrwxrwxrwx root/root 0 2013-06-15 09:53 ./usr/bin/phd1994 -> profphd_net profnet-dbg_1.0.21-1+wheezy1_armhf.deb ────────────────────────────────────── new debian package, version 2.0. size 25884 bytes: control archive=990 bytes. 1060 bytes, 17 lines control 846 bytes, 12 lines md5sums Package: profnet-dbg Source: profnet Version: 1.0.21-1+wheezy1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 139 Depends: profnet-bval (= 1.0.21-1+wheezy1), profnet-chop (= 1.0.21-1+wheezy1), profnet-con (= 1.0.21-1+wheezy1), profnet-isis (= 1.0.21-1+wheezy1), profnet-md (= 1.0.21-1+wheezy1), profnet-norsnet (= 1.0.21-1+wheezy1), profnet-prof (= 1.0.21-1+wheezy1), profnet-snapfun (= 1.0.21-1+wheezy1), profphd-net (= 1.0.21-1+wheezy1) Section: debug Priority: extra Homepage: http://www.predictprotein.org/ Description: debug files for profnet packages Profnet is a component of the prediction methods that make up the Predict Protein service by the lab of Burkhard Rost. It provides the neural network component to a variety of predictors that perform protein feature prediction directly from sequence. This neural network implementation has to be compiled for every different network architecture. This package contains the stripped debugging symbols for profnet binaries. drwxr-xr-x root/root 0 2013-06-15 09:53 ./ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/share/doc/profnet-dbg/ -rw-r--r-- root/root 1320 2011-06-21 07:14 ./usr/share/doc/profnet-dbg/changelog.gz -rw-r--r-- root/root 999 2013-05-21 04:31 ./usr/share/doc/profnet-dbg/changelog.Debian.gz -rw-r--r-- root/root 1914 2011-07-09 03:02 ./usr/share/doc/profnet-dbg/copyright drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/lib/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/lib/debug/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/lib/debug/usr/ drwxr-xr-x root/root 0 2013-06-15 09:53 ./usr/lib/debug/usr/bin/ -rw-r--r-- root/root 10478 2013-06-15 09:53 ./usr/lib/debug/usr/bin/profnet_prof -rw-r--r-- root/root 14483 2013-06-15 09:53 ./usr/lib/debug/usr/bin/profphd_net -rw-r--r-- root/root 10063 2013-06-15 09:53 ./usr/lib/debug/usr/bin/profnet_bval -rw-r--r-- root/root 10478 2013-06-15 09:53 ./usr/lib/debug/usr/bin/profnet_chop -rw-r--r-- root/root 10063 2013-06-15 09:53 ./usr/lib/debug/usr/bin/profnet_md -rw-r--r-- root/root 10117 2013-06-15 09:53 ./usr/lib/debug/usr/bin/profnet_isis -rw-r--r-- root/root 10446 2013-06-15 09:53 ./usr/lib/debug/usr/bin/profnet_snapfun -rw-r--r-- root/root 10478 2013-06-15 09:53 ./usr/lib/debug/usr/bin/profnet_con -rw-r--r-- root/root 10063 2013-06-15 09:53 ./usr/lib/debug/usr/bin/profnet_norsnet ┌──────────────────────────────────────────────────────────────────────────────┐ │ Post Build │ └──────────────────────────────────────────────────────────────────────────────┘ ┌──────────────────────────────────────────────────────────────────────────────┐ │ Cleanup │ └──────────────────────────────────────────────────────────────────────────────┘ Purging /«BUILDDIR» Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: adduser blt ca-certificates docbook docbook-to-man fontconfig fontconfig-config fonts-lyx freeglut3 freeglut3-dev gccxml gir1.2-glib-2.0 ipython iso-codes libatk1.0-0 libatk1.0-data libaudio2 libavahi-client3 libavahi-common-data libavahi-common3 libavcodec-dev libavcodec53 libavformat-dev libavformat53 libavutil-dev libavutil51 libblas3gf libboost-date-time-dev libboost-dev libboost-filesystem-dev libboost-program-options-dev libboost-python1.49.0 libboost-serialization-dev libboost-thread-dev libcairo2 libcf0 libcgal-dev libcgal9 libcups2 libcurl3-gnutls libdatrie1 libdbus-1-3 libdirac-encoder0 libdrm2 libeigen3-dev libelf1 libexpat1-dev libfontconfig1 libfontconfig1-dev libfreetype6 libfreetype6-dev libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgirepository-1.0-1 libgl1-mesa-dev libgl1-mesa-glx libgl2ps-dev libgl2ps0 libglapi-mesa libglib2.0-bin libglib2.0-dev libglu1-mesa libglu1-mesa-dev libgmp-dev libgmpxx4ldbl libgsm1 libgstreamer-plugins-base0.10-0 libgstreamer0.10-0 libgtk2.0-0 libgtk2.0-common libgts-0.7-5 libgts-dev libibverbs-dev libibverbs1 libice-dev libice6 libidn11 libjasper1 libjbig-dev libjpeg8 libjpeg8-dev liblapack3gf liblcms1 libloki-dev libloki0.1.7 libmng1 libmp3lame0 libmpfr-dev libmysqlclient-dev libmysqlclient18 libnetcdf-dev libnetcdfc++4 libnetcdfc7 libnetcdff5 libogg0 libopenjpeg2 libopenmpi-dev libopenmpi1.3 liborc-0.4-0 libpango1.0-0 libpcre3-dev libpcrecpp0 libpixman-1-0 libpng12-dev libpq5 libpthread-stubs0 libpthread-stubs0-dev libqglviewer-dev-common libqglviewer-qt4-2 libqglviewer-qt4-dev libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-opengl libqt4-opengl-dev libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtassistantclient4 libqtcore4 libqtdbus4 libqtgui4 libqtwebkit4 librtmp0 libschroedinger-1.0-0 libsm-dev libsm6 libsp1c2 libspeex1 libssh2-1 libswscale-dev libswscale2 libthai-data libthai0 libtheora0 libtiff4 libtiff4-dev libtiffxx0c2 libtorque2 libva1 libvorbis0a libvorbisenc2 libvpx1 libvtk5.8 libx11-6 libx11-data libx11-dev libx11-xcb1 libx264-123 libxau-dev libxau6 libxcb-glx0 libxcb-render0 libxcb-shm0 libxcb1 libxcb1-dev libxcomposite1 libxcursor1 libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxft-dev libxft2 libxi6 libxinerama1 libxml2-dev libxmu-dev libxmu-headers libxmu6 libxrandr2 libxrender-dev libxrender1 libxss-dev libxss1 libxt-dev libxt6 libxvidcore4 libxxf86vm1 mesa-common-dev mpi-default-dev mysql-common openmpi-common openssl pkg-config pyqt4-dev-tools python python-cairo python-configobj python-dateutil python-decorator python-gi python-gobject python-gobject-2 python-imaging python-matplotlib python-matplotlib-data python-minimal python-numpy python-pexpect python-pyparsing python-qt4 python-simplegeneric python-sip python-support python-tk python-tz python-xlib qdbus qt4-linguist-tools qt4-qmake scons sgml-data sp tcl8.5 tcl8.5-dev tk8.5 tk8.5-dev ttf-dejavu-core x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev x11proto-render-dev x11proto-scrnsaver-dev x11proto-xext-dev xorg-sgml-doctools xtrans-dev zlib1g-dev Use 'apt-get autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 21 not upgraded. Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: adduser blt ca-certificates debhelper docbook docbook-to-man fontconfig fontconfig-config fonts-lyx freeglut3 freeglut3-dev gccxml gettext gettext-base gir1.2-glib-2.0 groff-base html2text intltool-debian ipython iso-codes libasprintf0c2 libatk1.0-0 libatk1.0-data libaudio2 libavahi-client3 libavahi-common-data libavahi-common3 libavcodec-dev libavcodec53 libavformat-dev libavformat53 libavutil-dev libavutil51 libblas3gf libboost-date-time-dev libboost-dev libboost-filesystem-dev libboost-program-options-dev libboost-python1.49.0 libboost-serialization-dev libboost-thread-dev libcairo2 libcf0 libcgal-dev libcgal9 libcroco3 libcups2 libcurl3-gnutls libdatrie1 libdbus-1-3 libdirac-encoder0 libdrm2 libeigen3-dev libelf1 libexpat1-dev libffi5 libfontconfig1 libfontconfig1-dev libfreetype6 libfreetype6-dev libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgettextpo0 libgirepository-1.0-1 libgl1-mesa-dev libgl1-mesa-glx libgl2ps-dev libgl2ps0 libglapi-mesa libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev libglu1-mesa libglu1-mesa-dev libgmp-dev libgmpxx4ldbl libgsm1 libgstreamer-plugins-base0.10-0 libgstreamer0.10-0 libgtk2.0-0 libgtk2.0-common libgts-0.7-5 libgts-dev libibverbs-dev libibverbs1 libice-dev libice6 libidn11 libjasper1 libjbig-dev libjpeg8 libjpeg8-dev liblapack3gf liblcms1 libloki-dev libloki0.1.7 libmng1 libmp3lame0 libmpfr-dev libmysqlclient-dev libmysqlclient18 libnetcdf-dev libnetcdfc++4 libnetcdfc7 libnetcdff5 libogg0 libopenjpeg2 libopenmpi-dev libopenmpi1.3 liborc-0.4-0 libpango1.0-0 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-dev libpopt0 libpq5 libpthread-stubs0 libpthread-stubs0-dev libqglviewer-dev-common libqglviewer-qt4-2 libqglviewer-qt4-dev libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-opengl libqt4-opengl-dev libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtassistantclient4 libqtcore4 libqtdbus4 libqtgui4 libqtwebkit4 librtmp0 libschroedinger-1.0-0 libsm-dev libsm6 libsp1c2 libspeex1 libssh2-1 libswscale-dev libswscale2 libthai-data libthai0 libtheora0 libtiff4 libtiff4-dev libtiffxx0c2 libtorque2 libunistring0 libva1 libvorbis0a libvorbisenc2 libvpx1 libvtk5.8 libx11-6 libx11-data libx11-dev libx11-xcb1 libx264-123 libxau-dev libxau6 libxcb-glx0 libxcb-render0 libxcb-shm0 libxcb1 libxcb1-dev libxcomposite1 libxcursor1 libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxft-dev libxft2 libxi6 libxinerama1 libxml2 libxml2-dev libxmu-dev libxmu-headers libxmu6 libxrandr2 libxrender-dev libxrender1 libxss-dev libxss1 libxt-dev libxt6 libxvidcore4 libxxf86vm1 man-db mesa-common-dev mpi-default-dev mysql-common openmpi-common openssl pkg-config po-debconf pyqt4-dev-tools python python-cairo python-configobj python-dateutil python-decorator python-gi python-gobject python-gobject-2 python-imaging python-matplotlib python-matplotlib-data python-minimal python-numpy python-pexpect python-pyparsing python-qt4 python-simplegeneric python-sip python-support python-tk python-tz python-xlib qdbus qt4-linguist-tools qt4-qmake scons sgml-base sgml-data shared-mime-info sp tcl8.5 tcl8.5-dev tk8.5 tk8.5-dev ttf-dejavu-core x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev x11proto-render-dev x11proto-scrnsaver-dev x11proto-xext-dev xml-core xorg-sgml-doctools xtrans-dev zlib1g-dev Use 'apt-get autoremove' to remove them. The following packages will be REMOVED: gfortran* gfortran-4.6* rsync* sbuild-build-depends-profnet-dummy* 0 upgraded, 0 newly installed, 4 to remove and 21 not upgraded. After this operation, 12.6 MB disk space will be freed. (Reading database ... 42475 files and directories currently installed.) Removing sbuild-build-depends-profnet-dummy ... Removing gfortran ... Removing gfortran-4.6 ... Removing rsync ... All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of stop. Purging configuration files for rsync ... Processing triggers for man-db ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Summary │ └──────────────────────────────────────────────────────────────────────────────┘ Build Architecture: armhf Build-Space: 9644 Build-Time: 573 Distribution: wheezy-staging Host Architecture: armhf Install-Time: 36 Job: profnet_1.0.21-1+wheezy1 Machine Architecture: armhf Package: profnet Package-Time: 627 Source-Version: 1.0.21-1+wheezy1 Space: 9644 Status: successful Version: 1.0.21-1+wheezy1 ──────────────────────────────────────────────────────────────────────────────── Finished at 20130615-0954 Build needed 00:10:27, 9644k disc space