ProteoWizard
Classes | Namespaces | Constant Groups | Typedefs | Functions
MinimumPepXML.hpp File Reference
#include "pwiz/utility/minimxml/XMLWriter.hpp"
#include "pwiz/data/misc/PeakData.hpp"
#include "boost/shared_ptr.hpp"
#include "boost/logic/tribool.hpp"
#include <iostream>
#include <stdexcept>

Go to the source code of this file.

Classes

struct  pwiz::data::pepxml::Specificity
 
struct  pwiz::data::pepxml::SampleEnzyme
 
struct  pwiz::data::pepxml::SearchDatabase
 
struct  pwiz::data::pepxml::Q3RatioResult
 
struct  pwiz::data::pepxml::RocDataPoint
 
struct  pwiz::data::pepxml::ErrorPoint
 
struct  pwiz::data::pepxml::DistributionPoint
 
struct  pwiz::data::pepxml::MixtureModel
 
struct  pwiz::data::pepxml::PeptideProphetSummary
 
struct  pwiz::data::pepxml::PeptideProphetResult
 
struct  pwiz::data::pepxml::AnalysisResult
 
struct  pwiz::data::pepxml::AlternativeProtein
 
struct  pwiz::data::pepxml::ModAminoAcidMass
 
struct  pwiz::data::pepxml::ModificationInfo
 
struct  pwiz::data::pepxml::Parameter
 
struct  pwiz::data::pepxml::SearchScore
 
struct  pwiz::data::pepxml::SearchHit
 
struct  pwiz::data::pepxml::SearchResult
 
struct  pwiz::data::pepxml::EnzymaticSearchConstraint
 
struct  pwiz::data::pepxml::AminoAcidModification
 
struct  pwiz::data::pepxml::SearchSummary
 Database search settings. More...
 
struct  pwiz::data::pepxml::AnalysisTimestamp
 Reference for analysis applied to current run (time corresponds with analysis_summary/, id corresponds with analysis_result/) More...
 
struct  pwiz::data::pepxml::SpectrumQuery
 
struct  pwiz::data::pepxml::MSMSRunSummary
 
struct  pwiz::data::pepxml::AnalysisSummary
 
struct  pwiz::data::pepxml::DataFilter
 
struct  pwiz::data::pepxml::DatasetDerivation
 Source and filtering criteria used to generate dataset. More...
 
struct  pwiz::data::pepxml::MSMSPipelineAnalysis
 
struct  pwiz::data::pepxml::Match
 
struct  pwiz::data::pepxml::MatchData
 

Namespaces

 pwiz
 
 pwiz::data
 
 pwiz::data::pepxml
 

Constant Groups

 pwiz
 
 pwiz::data
 
 pwiz::data::pepxml
 

Typedefs

typedef boost::shared_ptr
< Parameter > 
pwiz::data::pepxml::ParameterPtr
 
typedef boost::shared_ptr
< SearchScore > 
pwiz::data::pepxml::SearchScorePtr
 
typedef boost::shared_ptr
< SearchHit > 
pwiz::data::pepxml::SearchHitPtr
 
typedef boost::shared_ptr
< SearchResult > 
pwiz::data::pepxml::SearchResultPtr
 
typedef boost::shared_ptr
< SearchSummary > 
pwiz::data::pepxml::SearchSummaryPtr
 
typedef boost::shared_ptr
< SpectrumQuery > 
pwiz::data::pepxml::SpectrumQueryPtr
 
typedef boost::shared_ptr
< AnalysisSummary > 
pwiz::data::pepxml::AnalysisSummaryPtr
 
typedef boost::shared_ptr
< DataFilter > 
pwiz::data::pepxml::DataFilterPtr
 
typedef boost::shared_ptr
< DatasetDerivation > 
pwiz::data::pepxml::DatasetDerivationPtr
 
typedef boost::shared_ptr< Match > pwiz::data::pepxml::MatchPtr
 

Functions

void pwiz::data::pepxml::setLogStream (std::ostream &os)
 
PWIZ_API_DECL bool pwiz::data::pepxml::operator== (const SearchHitPtr left, const SearchHitPtr right)
 
PWIZ_API_DECL bool pwiz::data::pepxml::operator== (SearchResultPtr left, SearchResultPtr right)
 
PWIZ_API_DECL bool pwiz::data::pepxml::operator== (const SearchSummaryPtr left, const SearchSummaryPtr right)
 
PWIZ_API_DECL bool pwiz::data::pepxml::operator== (const SpectrumQueryPtr left, const SpectrumQueryPtr right)
 
PWIZ_API_DECL bool pwiz::data::pepxml::operator== (const MatchPtr left, const MatchPtr right)