mvpa2.clfs.warehouse.OneWayAnova

Inheritance diagram of OneWayAnova

class mvpa2.clfs.warehouse.OneWayAnova(space='targets', **kwargs)

FeaturewiseMeasure that performs a univariate ANOVA.

F-scores are computed for each feature as the standard fraction of between and within group variances. Groups are defined by samples with unique labels.

No statistical testing is performed, but raw F-scores are returned as a sensitivity map. As usual F-scores have a range of [0,inf] with greater values indicating higher sensitivity.

The sensitivity map is returned as a single-sample dataset. If SciPy is available the associated p-values will also be computed and are available from the ‘fprob’ feature attribute.

Notes

Available conditional attributes:

  • calling_time+: Time (in seconds) it took to call the node
  • null_prob+: None
  • null_t: None
  • raw_results: Computed results before invoking postproc. Stored only if postproc is not None.
  • training_time+: Time (in seconds) it took to train the learner

(Conditional attributes enabled by default suffixed with +)

Parameters :

space : str

What samples attribute to use as targets (labels).

enable_ca : None or list of str

Names of the conditional attributes which should be enabled in addition to the default ones

disable_ca : None or list of str

Names of the conditional attributes which should be disabled

null_dist : instance of distribution estimator

The estimated distribution is used to assign a probability for a certain value of the computed measure.

auto_train : bool

Flag whether the learner will automatically train itself on the input dataset when called untrained.

force_train : bool

Flag whether the learner will enforce training on the input dataset upon every call.

postproc : Node instance, optional

Node to perform post-processing of results. This node is applied in __call__() to perform a final processing step on the to be result dataset. If None, nothing is done.

descr : str

Description of the instance

NeuroDebian

NITRC-listed