sbuild (Debian sbuild) 0.62.6 (07 Dec 2011) on build01.raspbian.lan

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║ minc 2.1.10-1 (armhf)                                      21 May 2012 21:40 ║
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Package: minc
Version: 2.1.10-1
Source Version: 2.1.10-1
Distribution: testing
Architecture: armhf

I: NOTICE: Log filtering will replace 'build/minc-r4qZ5S/minc-2.1.10' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/minc-r4qZ5S' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/testing-armhf-sbuild-bdac6cfb-942a-466e-be3f-24ad14caa0bb' with '«CHROOT»'

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│ Update chroot                                                                │
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Hit http://repo.raspbian.lan testing InRelease
Hit http://repo.raspbian.lan testing/main Sources
Hit http://repo.raspbian.lan testing/main armhf Packages
Ign http://repo.raspbian.lan testing/main TranslationIndex
Ign http://repo.raspbian.lan testing/main Translation-en
Reading package lists...

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│ Fetch source files                                                           │
└──────────────────────────────────────────────────────────────────────────────┘


Check APT
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Checking available source versions...

Download source files with APT
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Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'minc' packaging is maintained in the 'Svn' version control system at:
svn://svn.debian.org/svn/debian-med/trunk/packages/minc/trunk/
Need to get 1664 kB of source archives.
Get:1 http://repo.raspbian.lan/raspbian/ testing/main minc 2.1.10-1 (dsc) [1490 B]
Get:2 http://repo.raspbian.lan/raspbian/ testing/main minc 2.1.10-1 (tar) [1656 kB]
Get:3 http://repo.raspbian.lan/raspbian/ testing/main minc 2.1.10-1 (diff) [6507 B]
Fetched 1664 kB in 0s (8931 kB/s)
Download complete and in download only mode

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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-BNkLiK/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Reading package lists...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver)                         │
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Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 1 newly installed, 0 to remove and 16 not upgraded.
Need to get 0 B/704 B of archives.
After this operation, 0 B of additional disk space will be used.
Selecting previously unselected package sbuild-build-depends-core-dummy.
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Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), autotools-dev, dh-autoreconf, libnetcdf-dev, zlib1g-dev, texlive-latex-base, libhdf5-dev
Filtered Build-Depends: libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), autotools-dev, dh-autoreconf, libnetcdf-dev, zlib1g-dev, texlive-latex-base, libhdf5-dev
dpkg-deb: building package `sbuild-build-depends-minc-dummy' in `/«BUILDDIR»/resolver-D44pow/apt_archive/sbuild-build-depends-minc-dummy.deb'.
OK
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install minc build dependencies (apt-based resolver)                         │
└──────────────────────────────────────────────────────────────────────────────┘

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
  autoconf automake autotools-dev bsdmainutils debhelper dh-autoreconf ed file
  fontconfig-config gettext gettext-base groff-base hdf5-helpers html2text
  intltool-debian libcf0 libcroco3 libcurl3-gnutls libexpat1 libffi5
  libfontconfig1 libfreetype6 libgcrypt11 libgfortran3 libglib2.0-0
  libgnutls26 libgpg-error0 libgraphite3 libgssapi-krb5-2 libhdf5-7
  libhdf5-dev libice6 libidn11 libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1
  libkpathsea6 libkrb5-3 libkrb5support0 liblcms1 libldap-2.4-2 libmagic1
  libnetcdf-dev libnetcdfc++4 libnetcdfc7 libnetcdff5 libopenjpeg2 libp11-kit0
  libpaper-utils libpaper1 libpcre3 libpipeline1 libpng12-0 libpoppler13
  libptexenc1 librtmp0 libsasl2-2 libsm6 libssh2-1 libtasn1-3 libtool
  libunistring0 libx11-6 libx11-data libxau6 libxaw7 libxcb1 libxdmcp6
  libxext6 libxml2 libxmu6 libxpm4 libxt6 luatex m4 man-db mime-support
  po-debconf tex-common texlive-base texlive-binaries texlive-common
  texlive-doc-base texlive-latex-base ttf-dejavu-core x11-common zlib1g-dev
Suggested packages:
  autoconf2.13 autoconf-archive gnu-standards autoconf-doc wamerican wordlist
  whois vacation dh-make gettext-doc groff rng-tools krb5-doc krb5-user
  libhdf5-doc liblcms-utils netcdf-bin netcdf-doc libtool-doc automaken
  gfortran fortran95-compiler gcj less www-browser libmail-box-perl perl-tk
  xpdf-reader pdf-viewer ghostscript gv postscript-viewer
Recommended packages:
  autopoint curl wget lynx-cur ca-certificates libglib2.0-data
  shared-mime-info krb5-locales pkg-config poppler-data libsasl2-modules
  libltdl-dev xml-core texlive-luatex libmail-sendmail-perl lmodern python
  ruby wish texlive-latex-base-doc
The following NEW packages will be installed:
  autoconf automake autotools-dev bsdmainutils debhelper dh-autoreconf ed file
  fontconfig-config gettext gettext-base groff-base hdf5-helpers html2text
  intltool-debian libcf0 libcroco3 libcurl3-gnutls libexpat1 libffi5
  libfontconfig1 libfreetype6 libgcrypt11 libgfortran3 libglib2.0-0
  libgnutls26 libgpg-error0 libgraphite3 libgssapi-krb5-2 libhdf5-7
  libhdf5-dev libice6 libidn11 libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1
  libkpathsea6 libkrb5-3 libkrb5support0 liblcms1 libldap-2.4-2 libmagic1
  libnetcdf-dev libnetcdfc++4 libnetcdfc7 libnetcdff5 libopenjpeg2 libp11-kit0
  libpaper-utils libpaper1 libpcre3 libpipeline1 libpng12-0 libpoppler13
  libptexenc1 librtmp0 libsasl2-2 libsm6 libssh2-1 libtasn1-3 libtool
  libunistring0 libx11-6 libx11-data libxau6 libxaw7 libxcb1 libxdmcp6
  libxext6 libxml2 libxmu6 libxpm4 libxt6 luatex m4 man-db mime-support
  po-debconf sbuild-build-depends-minc-dummy tex-common texlive-base
  texlive-binaries texlive-common texlive-doc-base texlive-latex-base
  ttf-dejavu-core x11-common zlib1g-dev
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 89 newly installed, 0 to remove and 16 not upgraded.
Need to get 0 B/67.9 MB of archives.
After this operation, 172 MB of additional disk space will be used.
Selecting previously unselected package libpcre3:armhf.
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Setting up libpcre3:armhf (1:8.30-5) ...
Setting up libpipeline1:armhf (1.2.1-1) ...
Setting up libgpg-error0:armhf (1.10-3) ...
Setting up libgcrypt11:armhf (1.5.0-3) ...
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Setting up libtasn1-3:armhf (2.12-1) ...
Setting up libgnutls26:armhf (2.12.19-1) ...
Setting up libkrb5support0:armhf (1.10+dfsg~beta1-2) ...
Setting up libk5crypto3:armhf (1.10+dfsg~beta1-2) ...
Setting up libkeyutils1:armhf (1.5.5-2) ...
Setting up libkrb5-3:armhf (1.10+dfsg~beta1-2) ...
Setting up libgssapi-krb5-2:armhf (1.10+dfsg~beta1-2) ...
Setting up libidn11:armhf (1.24-2) ...
Setting up libsasl2-2:armhf (2.1.25.dfsg1-4) ...
Setting up libldap-2.4-2:armhf (2.4.28-1.1+rpi1) ...
Setting up libmagic1:armhf (5.11-1) ...
Setting up libxml2:armhf (2.7.8.dfsg-9) ...
Setting up libffi5:armhf (3.0.10-3+b3) ...
Setting up libglib2.0-0:armhf (2.32.2-1) ...
No schema files found: doing nothing.
Setting up libcroco3:armhf (0.6.5-1) ...
Setting up librtmp0:armhf (2.4+20111222.git4e06e21-1) ...
Setting up libssh2-1:armhf (1.4.1-1) ...
Setting up libcurl3-gnutls:armhf (7.25.0-1) ...
Setting up libexpat1:armhf (2.1.0-1) ...
Setting up libfreetype6:armhf (2.4.9-1) ...
Setting up ttf-dejavu-core (2.33-2) ...
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Setting up x11-common (1:7.6+13) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libice6:armhf (2:1.0.8-2) ...
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Setting up libpaper1:armhf (1.1.24+nmu2) ...

Creating config file /etc/papersize with new version
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Setting up libx11-data (2:1.4.99.901-2) ...
Setting up libx11-6:armhf (2:1.4.99.901-2) ...
Setting up libxext6:armhf (2:1.3.1-2) ...
Setting up libxt6:armhf (1:1.1.3-1) ...
Setting up libxmu6:armhf (2:1.1.1-1) ...
Setting up libxpm4:armhf (1:3.5.10-1) ...
Setting up libxaw7:armhf (2:1.0.10-2) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
Setting up groff-base (1.21-7) ...
Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
Setting up file (5.11-1) ...
Setting up gettext-base (0.18.1.1-5+rpi1) ...
Setting up m4 (1.4.16-3) ...
Setting up mime-support (3.52-1) ...
update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode.
Setting up autoconf (2.69-1) ...
Setting up autotools-dev (20120210.1) ...
Setting up automake (1:1.11.5-1) ...
update-alternatives: using /usr/bin/automake-1.11 to provide /usr/bin/automake (automake) in auto mode.
Setting up html2text (1.3.2a-15) ...
Setting up gettext (0.18.1.1-5+rpi1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
Setting up debhelper (9.20120419) ...
Setting up libtool (2.4.2-1+b2) ...
Setting up dh-autoreconf (6) ...
Setting up ed (1.6-1) ...
Setting up hdf5-helpers (1.8.8-9) ...
Setting up libcf0 (1:4.1.3-6) ...
Setting up libgraphite3 (1:2.3.1-0.2) ...
Setting up libhdf5-7 (1.8.8-9) ...
Setting up zlib1g-dev:armhf (1:1.2.7.dfsg-1) ...
Setting up libjpeg8-dev:armhf (8d-1) ...
Setting up libhdf5-dev (1.8.8-9) ...
Setting up libkpathsea6 (2011.20120410-1) ...
Setting up liblcms1 (1.19.dfsg-1) ...
Setting up libnetcdfc7 (1:4.1.3-6) ...
Setting up libnetcdff5 (1:4.1.3-6) ...
Setting up libnetcdfc++4 (1:4.1.3-6) ...
Setting up libnetcdf-dev (1:4.1.3-6) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libopenjpeg2 (1.3+dfsg-4) ...
Setting up libpoppler13 (0.16.7-3) ...
Setting up libptexenc1 (2011.20120410-1) ...
Setting up luatex (0.70.1-3) ...
texlive-base is not ready, cannot create formats
Setting up tex-common (3.11) ...
Running mktexlsr. This may take some time... done.
texlive-base is not ready, delaying updmap-sys call
texlive-base is not ready, skipping fmtutil-sys --all call
Setting up texlive-common (2011.20120424-1) ...
Setting up texlive-doc-base (2011.20120424-1) ...
Setting up texlive-binaries (2011.20120410-1) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode.
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode.
Building format(s) --refresh.
	This may take some time... done.
Processing triggers for tex-common ...
Running mktexlsr. This may take some time... done.
Setting up texlive-base (2011.20120424-1) ...
/usr/bin/tl-paper: setting paper size for dvips to a4.
/usr/bin/tl-paper: setting paper size for dvipdfmx to a4.
/usr/bin/tl-paper: setting paper size for xdvi to a4.
/usr/bin/tl-paper: setting paper size for pdftex to a4.
Running mktexlsr. This may take some time... done.
Building format(s) --all.
	This may take some time... done.
Processing triggers for tex-common ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up texlive-latex-base (2011.20120424-1) ...
Running mktexlsr. This may take some time... done.
Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-latex-base.cnf.
	This may take some time... done.
Processing triggers for tex-common ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up sbuild-build-depends-minc-dummy (0.invalid.0) ...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment                                                            │
└──────────────────────────────────────────────────────────────────────────────┘

Kernel: Linux 3.2.0-2-mx5 armhf (armv7l)
Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1.1+rpi2 gcc-4.6_4.6.3-1.1+rpi2 libc6-dev_2.13-32 libstdc++6_4.7.0-1.1+rpi libstdc++6-4.6-dev_4.6.3-1.1+rpi2 linux-libc-dev_3.2.12-1
Package versions: apt_0.8.15.10 autoconf_2.69-1 automake_1:1.11.5-1 autotools-dev_20120210.1 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 coreutils_8.13-3.1 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1.1+rpi2 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120419 debian-archive-keyring_2010.08.28 debianutils_4.3 dh-autoreconf_6 diffutils_1:3.2-2 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 ed_1.6-1 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 fontconfig-config_2.9.0-3 g++_4:4.6.2-4 g++-4.6_4.6.3-1.1+rpi2 gcc_4:4.6.2-4 gcc-4.4-base_4.4.7-1.1+rpi1 gcc-4.5-base_4.5.3-12+rpi1 gcc-4.6_4.6.3-1.1+rpi2 gcc-4.6-base_4.6.3-1.1+rpi2 gcc-4.7-base_4.7.0-1.1+rpi gettext_0.18.1.1-5+rpi1 gettext-base_0.18.1.1-5+rpi1 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.11-3 groff-base_1.21-7 gzip_1.4-5 hdf5-helpers_1.8.8-9 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libc-bin_2.13-32 libc-dev-bin_2.13-32 libc6_2.13-32 libc6-dev_2.13-32 libcf0_1:4.1.3-6 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libcurl3-gnutls_7.25.0-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libexpat1_2.1.0-1 libffi5_3.0.10-3+b3 libfile-fcntllock-perl_0.14-1 libfontconfig1_2.9.0-3 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-1.1+rpi libgcrypt11_1.5.0-3 libgdbm3_1.8.3-10 libgfortran3_4.7.0-1.1+rpi libglib2.0-0_2.32.2-1 libgmp10_2:5.0.5+dfsg-1.1 libgnutls26_2.12.19-1 libgomp1_4.7.0-1.1+rpi libgpg-error0_1.10-3 libgraphite3_1:2.3.1-0.2 libgssapi-krb5-2_1.10+dfsg~beta1-2 libhdf5-7_1.8.8-9 libhdf5-dev_1.8.8-9 libice6_2:1.0.8-2 libidn11_1.24-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 libk5crypto3_1.10+dfsg~beta1-2 libkeyutils1_1.5.5-2 libkpathsea6_2011.20120410-1 libkrb5-3_1.10+dfsg~beta1-2 libkrb5support0_1.10+dfsg~beta1-2 liblcms1_1.19.dfsg-1 libldap-2.4-2_2.4.28-1.1+rpi1 liblocale-gettext-perl_1.05-7 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-7 libncursesw5_5.9-7 libnetcdf-dev_1:4.1.3-6 libnetcdfc++4_1:4.1.3-6 libnetcdfc7_1:4.1.3-6 libnetcdff5_1:4.1.3-6 libopenjpeg2_1.3+dfsg-4 libp11-kit0_0.12-3 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7.1 libpaper-utils_1.1.24+nmu2 libpaper1_1.1.24+nmu2 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libpng12-0_1.2.49-1 libpoppler13_0.16.7-3 libptexenc1_2011.20120410-1 libreadline6_6.2-8 librtmp0_2.4+20111222.git4e06e21-1 libsasl2-2_2.1.25.dfsg1-4 libselinux1_2.1.9-2 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-3 libslang2_2.2.4-10 libsm6_2:1.2.1-2 libss2_1.42.2-2 libssh2-1_1.4.1-1 libstdc++6_4.7.0-1.1+rpi libstdc++6-4.6-dev_4.6.3-1.1+rpi2 libswitch-perl_2.16-2 libtasn1-3_2.12-1 libtext-charwidth-perl_0.04-7 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-7 libtool_2.4.2-1+b2 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.99.901-2 libx11-data_2:1.4.99.901-2 libxau6_1:1.0.7-1 libxaw7_2:1.0.10-2 libxcb1_1.8.1-1 libxdmcp6_1:1.1.1-1 libxext6_2:1.3.1-2 libxml2_2.7.8.dfsg-9 libxmu6_2:1.1.1-1 libxpm4_1:3.5.10-1 libxt6_1:1.1.3-1 linux-libc-dev_3.2.12-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 luatex_0.70.1-3 m4_1.4.16-3 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-17 mime-support_3.52-1 mount_2.20.1-4 multiarch-support_2.13-30 ncurses-base_5.9-6 ncurses-bin_5.9-7 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-minc-dummy_0.invalid.0 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tex-common_3.11 texlive-base_2011.20120424-1 texlive-binaries_2011.20120410-1 texlive-common_2011.20120424-1 texlive-doc-base_2011.20120424-1 texlive-latex-base_2011.20120424-1 ttf-dejavu-core_2.33-2 tzdata_2012c-1 ucf_3.0025+nmu3 util-linux_2.20.1-4 x11-common_1:7.6+13 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-1 zlib1g-dev_1:1.2.7.dfsg-1

┌──────────────────────────────────────────────────────────────────────────────┐
│ Build                                                                        │
└──────────────────────────────────────────────────────────────────────────────┘


Unpack source
─────────────

gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Sun Feb 26 08:04:10 2012 UTC using DSA key ID 21DB31C5
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./minc_2.1.10-1.dsc
dpkg-source: info: extracting minc in minc-2.1.10
dpkg-source: info: unpacking minc_2.1.10.orig.tar.gz
dpkg-source: info: unpacking minc_2.1.10-1.debian.tar.gz
dpkg-source: info: applying 01_mincedit-sensible-viewer.diff
dpkg-source: info: applying hdfv2-fixes.patch

Check disc space
────────────────

Sufficient free space for build

User Environment
────────────────

HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/X11R6/bin:/usr/games
SCHROOT_CHROOT_NAME=testing-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=108
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=testing-armhf-sbuild-bdac6cfb-942a-466e-be3f-24ad14caa0bb
SCHROOT_UID=106
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd

dpkg-buildpackage
─────────────────

dpkg-buildpackage: source package minc
dpkg-buildpackage: source version 2.1.10-1
 dpkg-source --before-build minc-2.1.10
dpkg-buildpackage: host architecture armhf
 fakeroot debian/rules clean
dh clean --parallel --with autotools_dev
   dh_testdir -O--parallel
   dh_auto_clean -O--parallel
   dh_autotools-dev_restoreconfig -O--parallel
   dh_clean -O--parallel
 debian/rules build-arch
dh build-arch --parallel --with autotools_dev
   dh_testdir -a -O--parallel
   dh_autotools-dev_updateconfig -a -O--parallel
   debian/rules override_dh_auto_configure
make[1]: Entering directory `/«PKGBUILDDIR»'
dh_auto_configure -- --enable-shared --enable-minc2 --enable-acr-nema CFLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security"
configure: WARNING: unrecognized options: --disable-maintainer-mode, --enable-minc2
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether ln -s works... yes
checking whether make sets $(MAKE)... (cached) yes
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking dependency style of gcc... none
checking whether gcc and cc understand -c and -o together... yes
checking for g77... no
checking for xlf... no
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checking whether we are using the GNU Fortran 77 compiler... no
checking whether  accepts -g... no
checking for flex... no
checking for lex... no
checking for bison... no
checking for byacc... no
checking whether time.h and sys/time.h may both be included... yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking for sys/stat.h... (cached) yes
checking sys/wait.h usability... yes
checking sys/wait.h presence... yes
checking for sys/wait.h... yes
checking for unistd.h... (cached) yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking float.h usability... yes
checking float.h presence... yes
checking for float.h... yes
checking values.h usability... yes
checking values.h presence... yes
checking for values.h... yes
checking for int32_t... yes
checking for int16_t... yes
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking for a sed that does not truncate output... /bin/sed
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 805306365
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for ar... ar
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for dlfcn.h... yes
checking for g77... no
checking for xlf... no
checking for f77... no
checking for frt... no
checking for pgf77... no
checking for cf77... no
checking for fort77... no
checking for fl32... no
checking for af77... no
checking for xlf90... no
checking for f90... no
checking for pgf90... no
checking for pghpf... no
checking for epcf90... no
checking for gfortran... no
checking for g95... no
checking for xlf95... no
checking for f95... no
checking for fort... no
checking for ifort... no
checking for ifc... no
checking for efc... no
checking for pgfortran... no
checking for pgf95... no
checking for lf95... no
checking for ftn... no
checking whether we are using the GNU Fortran 77 compiler... (cached) no
checking whether  accepts -g... (cached) no
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for pod2man... /usr/bin/pod2man
checking for library m... yes
checking for library netcdf... yes
checking for library z... yes
checking for library hdf5... yes
checking for strdup... yes
checking for mkstemp... yes
checking for tempnam... yes
checking for tmpnam... yes
checking for getpwnam... yes
checking for select... yes
checking for strerror... yes
checking for sysconf... yes
checking for pid_t... yes
checking vfork.h usability... no
checking vfork.h presence... no
checking for vfork.h... no
checking for fork... yes
checking for vfork... yes
checking for working fork... yes
checking for working vfork... (cached) yes
checking for system... yes
checking for popen... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating epm-header
config.status: creating doc/Makefile
config.status: creating testdir/Makefile
config.status: creating libsrc2/test/Makefile
config.status: creating volume_io/Makefile
config.status: creating volume_io/Documentation/Makefile
config.status: creating volume_io/Testing/Makefile
config.status: creating progs/xfm/xfmflip
config.status: creating progs/minccomplete/minccomplete
config.status: creating progs/minchistory/minchistory
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: WARNING: unrecognized options: --disable-maintainer-mode, --enable-minc2
make[1]: Leaving directory `/«PKGBUILDDIR»'
   dh_auto_build -a -O--parallel
make[1]: Entering directory `/«PKGBUILDDIR»'
make  all-recursive
make[2]: Entering directory `/«PKGBUILDDIR»'
Making all in .
make[3]: Entering directory `/«PKGBUILDDIR»'
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/ParseArgv.lo libsrc/ParseArgv.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/ParseArgv.c  -fPIC -DPIC -o libsrc/.libs/ParseArgv.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/ParseArgv.c -o libsrc/ParseArgv.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/read_file_names.lo libsrc/read_file_names.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/read_file_names.c  -fPIC -DPIC -o libsrc/.libs/read_file_names.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/read_file_names.c -o libsrc/read_file_names.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/dim_conversion.lo libsrc/dim_conversion.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/dim_conversion.c  -fPIC -DPIC -o libsrc/.libs/dim_conversion.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/dim_conversion.c -o libsrc/dim_conversion.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/image_conversion.lo libsrc/image_conversion.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/image_conversion.c  -fPIC -DPIC -o libsrc/.libs/image_conversion.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/image_conversion.c -o libsrc/image_conversion.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/minc_convenience.lo libsrc/minc_convenience.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_convenience.c  -fPIC -DPIC -o libsrc/.libs/minc_convenience.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_convenience.c -o libsrc/minc_convenience.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/minc_error.lo libsrc/minc_error.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_error.c  -fPIC -DPIC -o libsrc/.libs/minc_error.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_error.c -o libsrc/minc_error.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/nd_loop.lo libsrc/nd_loop.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/nd_loop.c  -fPIC -DPIC -o libsrc/.libs/nd_loop.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/nd_loop.c -o libsrc/nd_loop.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/netcdf_convenience.lo libsrc/netcdf_convenience.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/netcdf_convenience.c  -fPIC -DPIC -o libsrc/.libs/netcdf_convenience.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/netcdf_convenience.c -o libsrc/netcdf_convenience.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/time_stamp.lo libsrc/time_stamp.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/time_stamp.c  -fPIC -DPIC -o libsrc/.libs/time_stamp.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/time_stamp.c -o libsrc/time_stamp.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/value_conversion.lo libsrc/value_conversion.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/value_conversion.c  -fPIC -DPIC -o libsrc/.libs/value_conversion.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/value_conversion.c -o libsrc/value_conversion.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/voxel_loop.lo libsrc/voxel_loop.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/voxel_loop.c  -fPIC -DPIC -o libsrc/.libs/voxel_loop.o
libsrc/voxel_loop.c: In function 'voxel_loop':
libsrc/voxel_loop.c:360:4: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat]
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/voxel_loop.c -o libsrc/voxel_loop.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/hdf_convenience.lo libsrc/hdf_convenience.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/hdf_convenience.c  -fPIC -DPIC -o libsrc/.libs/hdf_convenience.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/hdf_convenience.c -o libsrc/hdf_convenience.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/minc_compat.lo libsrc/minc_compat.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_compat.c  -fPIC -DPIC -o libsrc/.libs/minc_compat.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_compat.c -o libsrc/minc_compat.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc/minc_simple.lo libsrc/minc_simple.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_simple.c  -fPIC -DPIC -o libsrc/.libs/minc_simple.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc/minc_simple.c -o libsrc/minc_simple.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/convert.lo libsrc2/convert.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/convert.c  -fPIC -DPIC -o libsrc2/.libs/convert.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/convert.c -o libsrc2/convert.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/datatype.lo libsrc2/datatype.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/datatype.c  -fPIC -DPIC -o libsrc2/.libs/datatype.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/datatype.c -o libsrc2/datatype.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/dimension.lo libsrc2/dimension.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/dimension.c  -fPIC -DPIC -o libsrc2/.libs/dimension.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/dimension.c -o libsrc2/dimension.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/free.lo libsrc2/free.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/free.c  -fPIC -DPIC -o libsrc2/.libs/free.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/free.c -o libsrc2/free.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/grpattr.lo libsrc2/grpattr.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/grpattr.c  -fPIC -DPIC -o libsrc2/.libs/grpattr.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/grpattr.c -o libsrc2/grpattr.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/hyper.lo libsrc2/hyper.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/hyper.c  -fPIC -DPIC -o libsrc2/.libs/hyper.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/hyper.c -o libsrc2/hyper.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/label.lo libsrc2/label.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/label.c  -fPIC -DPIC -o libsrc2/.libs/label.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/label.c -o libsrc2/label.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/m2util.lo libsrc2/m2util.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/m2util.c  -fPIC -DPIC -o libsrc2/.libs/m2util.o
libsrc2/m2util.c: In function 'minc_update_thumbnail':
libsrc2/m2util.c:1627:32: warning: passing argument 4 of 'H5Sselect_elements' from incompatible pointer type [enabled by default]
/usr/include/H5Spublic.h:128:15: note: expected 'const hsize_t *' but argument is of type 'const hsize_t **'
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/m2util.c -o libsrc2/m2util.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/record.lo libsrc2/record.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/record.c  -fPIC -DPIC -o libsrc2/.libs/record.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/record.c -o libsrc2/record.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/slice.lo libsrc2/slice.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/slice.c  -fPIC -DPIC -o libsrc2/.libs/slice.o
libsrc2/slice.c: In function 'mirw_slice_minmax':
libsrc2/slice.c:87:5: warning: passing argument 4 of 'H5Sselect_elements' from incompatible pointer type [enabled by default]
/usr/include/H5Spublic.h:128:15: note: expected 'const hsize_t *' but argument is of type 'const hsize_t **'
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/slice.c -o libsrc2/slice.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/valid.lo libsrc2/valid.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/valid.c  -fPIC -DPIC -o libsrc2/.libs/valid.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/valid.c -o libsrc2/valid.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/volprops.lo libsrc2/volprops.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/volprops.c  -fPIC -DPIC -o libsrc2/.libs/volprops.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/volprops.c -o libsrc2/volprops.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o libsrc2/volume.lo libsrc2/volume.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/volume.c  -fPIC -DPIC -o libsrc2/.libs/volume.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c libsrc2/volume.c -o libsrc2/volume.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -version-info 2:3:1 -Wl,-z,relro -o libminc2.la -rpath /usr/lib/arm-linux-gnueabihf libsrc/ParseArgv.lo libsrc/read_file_names.lo libsrc/dim_conversion.lo libsrc/image_conversion.lo libsrc/minc_convenience.lo libsrc/minc_error.lo libsrc/nd_loop.lo libsrc/netcdf_convenience.lo libsrc/time_stamp.lo libsrc/value_conversion.lo libsrc/voxel_loop.lo libsrc/hdf_convenience.lo libsrc/minc_compat.lo libsrc/minc_simple.lo libsrc2/convert.lo libsrc2/datatype.lo libsrc2/dimension.lo libsrc2/free.lo libsrc2/grpattr.lo libsrc2/hyper.lo libsrc2/label.lo libsrc2/m2util.lo libsrc2/record.lo libsrc2/slice.lo libsrc2/valid.lo libsrc2/volprops.lo libsrc2/volume.lo  -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -shared  libsrc/.libs/ParseArgv.o libsrc/.libs/read_file_names.o libsrc/.libs/dim_conversion.o libsrc/.libs/image_conversion.o libsrc/.libs/minc_convenience.o libsrc/.libs/minc_error.o libsrc/.libs/nd_loop.o libsrc/.libs/netcdf_convenience.o libsrc/.libs/time_stamp.o libsrc/.libs/value_conversion.o libsrc/.libs/voxel_loop.o libsrc/.libs/hdf_convenience.o libsrc/.libs/minc_compat.o libsrc/.libs/minc_simple.o libsrc2/.libs/convert.o libsrc2/.libs/datatype.o libsrc2/.libs/dimension.o libsrc2/.libs/free.o libsrc2/.libs/grpattr.o libsrc2/.libs/hyper.o libsrc2/.libs/label.o libsrc2/.libs/m2util.o libsrc2/.libs/record.o libsrc2/.libs/slice.o libsrc2/.libs/valid.o libsrc2/.libs/volprops.o libsrc2/.libs/volume.o   -lhdf5 -lz -lnetcdf -lm  -Wl,-z -Wl,relro   -Wl,-soname -Wl,libminc2.so.1 -o .libs/libminc2.so.1.1.3
libtool: link: (cd ".libs" && rm -f "libminc2.so.1" && ln -s "libminc2.so.1.1.3" "libminc2.so.1")
libtool: link: (cd ".libs" && rm -f "libminc2.so" && ln -s "libminc2.so.1.1.3" "libminc2.so")
libtool: link: ar cru .libs/libminc2.a  libsrc/ParseArgv.o libsrc/read_file_names.o libsrc/dim_conversion.o libsrc/image_conversion.o libsrc/minc_convenience.o libsrc/minc_error.o libsrc/nd_loop.o libsrc/netcdf_convenience.o libsrc/time_stamp.o libsrc/value_conversion.o libsrc/voxel_loop.o libsrc/hdf_convenience.o libsrc/minc_compat.o libsrc/minc_simple.o libsrc2/convert.o libsrc2/datatype.o libsrc2/dimension.o libsrc2/free.o libsrc2/grpattr.o libsrc2/hyper.o libsrc2/label.o libsrc2/m2util.o libsrc2/record.o libsrc2/slice.o libsrc2/valid.o libsrc2/volprops.o libsrc2/volume.o
libtool: link: ranlib .libs/libminc2.a
libtool: link: ( cd ".libs" && rm -f "libminc2.la" && ln -s "../libminc2.la" "libminc2.la" )
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/colour.lo volume_io/Geometry/colour.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/colour.c  -fPIC -DPIC -o volume_io/Geometry/.libs/colour.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/colour.c -o volume_io/Geometry/colour.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/colour_def.lo volume_io/Geometry/colour_def.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/colour_def.c  -fPIC -DPIC -o volume_io/Geometry/.libs/colour_def.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/colour_def.c -o volume_io/Geometry/colour_def.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/gaussian.lo volume_io/Geometry/gaussian.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/gaussian.c  -fPIC -DPIC -o volume_io/Geometry/.libs/gaussian.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/gaussian.c -o volume_io/Geometry/gaussian.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/inverse.lo volume_io/Geometry/inverse.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/inverse.c  -fPIC -DPIC -o volume_io/Geometry/.libs/inverse.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/inverse.c -o volume_io/Geometry/inverse.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/newton.lo volume_io/Geometry/newton.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/newton.c  -fPIC -DPIC -o volume_io/Geometry/.libs/newton.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/newton.c -o volume_io/Geometry/newton.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/points.lo volume_io/Geometry/points.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/points.c  -fPIC -DPIC -o volume_io/Geometry/.libs/points.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/points.c -o volume_io/Geometry/points.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/splines.lo volume_io/Geometry/splines.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/splines.c  -fPIC -DPIC -o volume_io/Geometry/.libs/splines.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/splines.c -o volume_io/Geometry/splines.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/tensors.lo volume_io/Geometry/tensors.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/tensors.c  -fPIC -DPIC -o volume_io/Geometry/.libs/tensors.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/tensors.c -o volume_io/Geometry/tensors.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Geometry/transforms.lo volume_io/Geometry/transforms.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/transforms.c  -fPIC -DPIC -o volume_io/Geometry/.libs/transforms.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Geometry/transforms.c -o volume_io/Geometry/transforms.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/MNI_formats/gen_xf_io.lo volume_io/MNI_formats/gen_xf_io.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/gen_xf_io.c  -fPIC -DPIC -o volume_io/MNI_formats/.libs/gen_xf_io.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/gen_xf_io.c -o volume_io/MNI_formats/gen_xf_io.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/MNI_formats/gen_xfs.lo volume_io/MNI_formats/gen_xfs.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/gen_xfs.c  -fPIC -DPIC -o volume_io/MNI_formats/.libs/gen_xfs.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/gen_xfs.c -o volume_io/MNI_formats/gen_xfs.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/MNI_formats/grid_transforms.lo volume_io/MNI_formats/grid_transforms.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/grid_transforms.c  -fPIC -DPIC -o volume_io/MNI_formats/.libs/grid_transforms.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/grid_transforms.c -o volume_io/MNI_formats/grid_transforms.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/MNI_formats/mni_io.lo volume_io/MNI_formats/mni_io.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/mni_io.c  -fPIC -DPIC -o volume_io/MNI_formats/.libs/mni_io.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/mni_io.c -o volume_io/MNI_formats/mni_io.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/MNI_formats/tag_points.lo volume_io/MNI_formats/tag_points.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/tag_points.c  -fPIC -DPIC -o volume_io/MNI_formats/.libs/tag_points.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/tag_points.c -o volume_io/MNI_formats/tag_points.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/MNI_formats/thin_plate_spline.lo volume_io/MNI_formats/thin_plate_spline.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/thin_plate_spline.c  -fPIC -DPIC -o volume_io/MNI_formats/.libs/thin_plate_spline.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/MNI_formats/thin_plate_spline.c -o volume_io/MNI_formats/thin_plate_spline.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/alloc.lo volume_io/Prog_utils/alloc.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/alloc.c  -fPIC -DPIC -o volume_io/Prog_utils/.libs/alloc.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/alloc.c -o volume_io/Prog_utils/alloc.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/alloc_check.lo volume_io/Prog_utils/alloc_check.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/alloc_check.c  -fPIC -DPIC -o volume_io/Prog_utils/.libs/alloc_check.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/alloc_check.c -o volume_io/Prog_utils/alloc_check.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/arrays.lo volume_io/Prog_utils/arrays.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/arrays.c  -fPIC -DPIC -o volume_io/Prog_utils/.libs/arrays.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/arrays.c -o volume_io/Prog_utils/arrays.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/files.lo volume_io/Prog_utils/files.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/files.c  -fPIC -DPIC -o volume_io/Prog_utils/.libs/files.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/files.c -o volume_io/Prog_utils/files.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/print.lo volume_io/Prog_utils/print.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/print.c  -fPIC -DPIC -o volume_io/Prog_utils/.libs/print.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/print.c -o volume_io/Prog_utils/print.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/progress.lo volume_io/Prog_utils/progress.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/progress.c  -fPIC -DPIC -o volume_io/Prog_utils/.libs/progress.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/progress.c -o volume_io/Prog_utils/progress.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/string.lo volume_io/Prog_utils/string.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/string.c  -fPIC -DPIC -o volume_io/Prog_utils/.libs/string.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/string.c -o volume_io/Prog_utils/string.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Prog_utils/time.lo volume_io/Prog_utils/time.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/time.c  -fPIC -DPIC -o volume_io/Prog_utils/.libs/time.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Prog_utils/time.c -o volume_io/Prog_utils/time.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/evaluate.lo volume_io/Volumes/evaluate.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/evaluate.c  -fPIC -DPIC -o volume_io/Volumes/.libs/evaluate.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/evaluate.c -o volume_io/Volumes/evaluate.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/get_hyperslab.lo volume_io/Volumes/get_hyperslab.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/get_hyperslab.c  -fPIC -DPIC -o volume_io/Volumes/.libs/get_hyperslab.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/get_hyperslab.c -o volume_io/Volumes/get_hyperslab.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/input_free.lo volume_io/Volumes/input_free.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/input_free.c  -fPIC -DPIC -o volume_io/Volumes/.libs/input_free.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/input_free.c -o volume_io/Volumes/input_free.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/input_mnc.lo volume_io/Volumes/input_mnc.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/input_mnc.c  -fPIC -DPIC -o volume_io/Volumes/.libs/input_mnc.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/input_mnc.c -o volume_io/Volumes/input_mnc.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/input_volume.lo volume_io/Volumes/input_volume.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/input_volume.c  -fPIC -DPIC -o volume_io/Volumes/.libs/input_volume.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/input_volume.c -o volume_io/Volumes/input_volume.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/multidim_arrays.lo volume_io/Volumes/multidim_arrays.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/multidim_arrays.c  -fPIC -DPIC -o volume_io/Volumes/.libs/multidim_arrays.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/multidim_arrays.c -o volume_io/Volumes/multidim_arrays.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/output_mnc.lo volume_io/Volumes/output_mnc.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/output_mnc.c  -fPIC -DPIC -o volume_io/Volumes/.libs/output_mnc.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/output_mnc.c -o volume_io/Volumes/output_mnc.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/output_volume.lo volume_io/Volumes/output_volume.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/output_volume.c  -fPIC -DPIC -o volume_io/Volumes/.libs/output_volume.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/output_volume.c -o volume_io/Volumes/output_volume.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/set_hyperslab.lo volume_io/Volumes/set_hyperslab.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/set_hyperslab.c  -fPIC -DPIC -o volume_io/Volumes/.libs/set_hyperslab.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/set_hyperslab.c -o volume_io/Volumes/set_hyperslab.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/volume_cache.lo volume_io/Volumes/volume_cache.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/volume_cache.c  -fPIC -DPIC -o volume_io/Volumes/.libs/volume_cache.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/volume_cache.c -o volume_io/Volumes/volume_cache.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o volume_io/Volumes/volumes.lo volume_io/Volumes/volumes.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/volumes.c  -fPIC -DPIC -o volume_io/Volumes/.libs/volumes.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volume_io/Volumes/volumes.c -o volume_io/Volumes/volumes.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -version-info 2:2:1 -Wl,-z,relro -o libvolume_io2.la -rpath /usr/lib/arm-linux-gnueabihf volume_io/Geometry/colour.lo volume_io/Geometry/colour_def.lo volume_io/Geometry/gaussian.lo volume_io/Geometry/inverse.lo volume_io/Geometry/newton.lo volume_io/Geometry/points.lo volume_io/Geometry/splines.lo volume_io/Geometry/tensors.lo volume_io/Geometry/transforms.lo volume_io/MNI_formats/gen_xf_io.lo volume_io/MNI_formats/gen_xfs.lo volume_io/MNI_formats/grid_transforms.lo volume_io/MNI_formats/mni_io.lo volume_io/MNI_formats/tag_points.lo volume_io/MNI_formats/thin_plate_spline.lo volume_io/Prog_utils/alloc.lo volume_io/Prog_utils/alloc_check.lo volume_io/Prog_utils/arrays.lo volume_io/Prog_utils/files.lo volume_io/Prog_utils/print.lo volume_io/Prog_utils/progress.lo volume_io/Prog_utils/string.lo volume_io/Prog_utils/time.lo volume_io/Volumes/evaluate.lo volume_io/Volumes/get_hyperslab.lo volume_io/Volumes/input_free.lo volume_io/Volumes/input_mnc.lo volume_io/Volumes/input_volume.lo volume_io/Volumes/multidim_arrays.lo volume_io/Volumes/output_mnc.lo volume_io/Volumes/output_volume.lo volume_io/Volumes/set_hyperslab.lo volume_io/Volumes/volume_cache.lo volume_io/Volumes/volumes.lo  -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -shared  volume_io/Geometry/.libs/colour.o volume_io/Geometry/.libs/colour_def.o volume_io/Geometry/.libs/gaussian.o volume_io/Geometry/.libs/inverse.o volume_io/Geometry/.libs/newton.o volume_io/Geometry/.libs/points.o volume_io/Geometry/.libs/splines.o volume_io/Geometry/.libs/tensors.o volume_io/Geometry/.libs/transforms.o volume_io/MNI_formats/.libs/gen_xf_io.o volume_io/MNI_formats/.libs/gen_xfs.o volume_io/MNI_formats/.libs/grid_transforms.o volume_io/MNI_formats/.libs/mni_io.o volume_io/MNI_formats/.libs/tag_points.o volume_io/MNI_formats/.libs/thin_plate_spline.o volume_io/Prog_utils/.libs/alloc.o volume_io/Prog_utils/.libs/alloc_check.o volume_io/Prog_utils/.libs/arrays.o volume_io/Prog_utils/.libs/files.o volume_io/Prog_utils/.libs/print.o volume_io/Prog_utils/.libs/progress.o volume_io/Prog_utils/.libs/string.o volume_io/Prog_utils/.libs/time.o volume_io/Volumes/.libs/evaluate.o volume_io/Volumes/.libs/get_hyperslab.o volume_io/Volumes/.libs/input_free.o volume_io/Volumes/.libs/input_mnc.o volume_io/Volumes/.libs/input_volume.o volume_io/Volumes/.libs/multidim_arrays.o volume_io/Volumes/.libs/output_mnc.o volume_io/Volumes/.libs/output_volume.o volume_io/Volumes/.libs/set_hyperslab.o volume_io/Volumes/.libs/volume_cache.o volume_io/Volumes/.libs/volumes.o   -lhdf5 -lz -lnetcdf -lm  -Wl,-z -Wl,relro   -Wl,-soname -Wl,libvolume_io2.so.1 -o .libs/libvolume_io2.so.1.1.2
libtool: link: (cd ".libs" && rm -f "libvolume_io2.so.1" && ln -s "libvolume_io2.so.1.1.2" "libvolume_io2.so.1")
libtool: link: (cd ".libs" && rm -f "libvolume_io2.so" && ln -s "libvolume_io2.so.1.1.2" "libvolume_io2.so")
libtool: link: ar cru .libs/libvolume_io2.a  volume_io/Geometry/colour.o volume_io/Geometry/colour_def.o volume_io/Geometry/gaussian.o volume_io/Geometry/inverse.o volume_io/Geometry/newton.o volume_io/Geometry/points.o volume_io/Geometry/splines.o volume_io/Geometry/tensors.o volume_io/Geometry/transforms.o volume_io/MNI_formats/gen_xf_io.o volume_io/MNI_formats/gen_xfs.o volume_io/MNI_formats/grid_transforms.o volume_io/MNI_formats/mni_io.o volume_io/MNI_formats/tag_points.o volume_io/MNI_formats/thin_plate_spline.o volume_io/Prog_utils/alloc.o volume_io/Prog_utils/alloc_check.o volume_io/Prog_utils/arrays.o volume_io/Prog_utils/files.o volume_io/Prog_utils/print.o volume_io/Prog_utils/progress.o volume_io/Prog_utils/string.o volume_io/Prog_utils/time.o volume_io/Volumes/evaluate.o volume_io/Volumes/get_hyperslab.o volume_io/Volumes/input_free.o volume_io/Volumes/input_mnc.o volume_io/Volumes/input_volume.o volume_io/Volumes/multidim_arrays.o volume_io/Volumes/output_mnc.o volume_io/Volumes/output_volume.o volume_io/Volumes/set_hyperslab.o volume_io/Volumes/volume_cache.o volume_io/Volumes/volumes.o
libtool: link: ranlib .libs/libvolume_io2.a
libtool: link: ( cd ".libs" && rm -f "libvolume_io2.la" && ln -s "../libvolume_io2.la" "libvolume_io2.la" )
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/acr_io.lo conversion/Acr_nema/acr_io.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/acr_io.c  -fPIC -DPIC -o conversion/Acr_nema/.libs/acr_io.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/acr_io.c -o conversion/Acr_nema/acr_io.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/dicom_client_routines.lo conversion/Acr_nema/dicom_client_routines.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/dicom_client_routines.c  -fPIC -DPIC -o conversion/Acr_nema/.libs/dicom_client_routines.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/dicom_client_routines.c -o conversion/Acr_nema/dicom_client_routines.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/dicom_network.lo conversion/Acr_nema/dicom_network.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/dicom_network.c  -fPIC -DPIC -o conversion/Acr_nema/.libs/dicom_network.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/dicom_network.c -o conversion/Acr_nema/dicom_network.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/element.lo conversion/Acr_nema/element.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/element.c  -fPIC -DPIC -o conversion/Acr_nema/.libs/element.o
conversion/Acr_nema/element.c: In function 'acr_get_element_numeric_array':
conversion/Acr_nema/element.c:1603:10: warning: ignoring return value of 'strtod', declared with attribute warn_unused_result [-Wunused-result]
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/element.c -o conversion/Acr_nema/element.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/file_io.lo conversion/Acr_nema/file_io.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/file_io.c  -fPIC -DPIC -o conversion/Acr_nema/.libs/file_io.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/file_io.c -o conversion/Acr_nema/file_io.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/globals.lo conversion/Acr_nema/globals.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/globals.c  -fPIC -DPIC -o conversion/Acr_nema/.libs/globals.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/globals.c -o conversion/Acr_nema/globals.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/group.lo conversion/Acr_nema/group.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/group.c  -fPIC -DPIC -o conversion/Acr_nema/.libs/group.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/group.c -o conversion/Acr_nema/group.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/message.lo conversion/Acr_nema/message.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/message.c  -fPIC -DPIC -o conversion/Acr_nema/.libs/message.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/message.c -o conversion/Acr_nema/message.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/value_repr.lo conversion/Acr_nema/value_repr.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/value_repr.c  -fPIC -DPIC -o conversion/Acr_nema/.libs/value_repr.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c conversion/Acr_nema/value_repr.c -o conversion/Acr_nema/value_repr.o >/dev/null 2>&1
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o libacr_nema.la -rpath /usr/lib/arm-linux-gnueabihf conversion/Acr_nema/acr_io.lo conversion/Acr_nema/dicom_client_routines.lo conversion/Acr_nema/dicom_network.lo conversion/Acr_nema/element.lo conversion/Acr_nema/file_io.lo conversion/Acr_nema/globals.lo conversion/Acr_nema/group.lo conversion/Acr_nema/message.lo conversion/Acr_nema/value_repr.lo  -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -shared  conversion/Acr_nema/.libs/acr_io.o conversion/Acr_nema/.libs/dicom_client_routines.o conversion/Acr_nema/.libs/dicom_network.o conversion/Acr_nema/.libs/element.o conversion/Acr_nema/.libs/file_io.o conversion/Acr_nema/.libs/globals.o conversion/Acr_nema/.libs/group.o conversion/Acr_nema/.libs/message.o conversion/Acr_nema/.libs/value_repr.o   -lhdf5 -lz -lnetcdf -lm  -Wl,-z -Wl,relro   -Wl,-soname -Wl,libacr_nema.so.0 -o .libs/libacr_nema.so.0.0.0
libtool: link: (cd ".libs" && rm -f "libacr_nema.so.0" && ln -s "libacr_nema.so.0.0.0" "libacr_nema.so.0")
libtool: link: (cd ".libs" && rm -f "libacr_nema.so" && ln -s "libacr_nema.so.0.0.0" "libacr_nema.so")
libtool: link: ar cru .libs/libacr_nema.a  conversion/Acr_nema/acr_io.o conversion/Acr_nema/dicom_client_routines.o conversion/Acr_nema/dicom_network.o conversion/Acr_nema/element.o conversion/Acr_nema/file_io.o conversion/Acr_nema/globals.o conversion/Acr_nema/group.o conversion/Acr_nema/message.o conversion/Acr_nema/value_repr.o
libtool: link: ranlib .libs/libacr_nema.a
libtool: link: ( cd ".libs" && rm -f "libacr_nema.la" && ln -s "../libacr_nema.la" "libacr_nema.la" )
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/coordinates/voxeltoworld.o progs/coordinates/voxeltoworld.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o voxeltoworld progs/coordinates/voxeltoworld.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/voxeltoworld progs/coordinates/voxeltoworld.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/coordinates/worldtovoxel.o progs/coordinates/worldtovoxel.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o worldtovoxel progs/coordinates/worldtovoxel.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/worldtovoxel progs/coordinates/worldtovoxel.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minc_modify_header/minc_modify_header.o progs/minc_modify_header/minc_modify_header.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o minc_modify_header progs/minc_modify_header/minc_modify_header.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minc_modify_header progs/minc_modify_header/minc_modify_header.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincaverage/mincaverage.o progs/mincaverage/mincaverage.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincaverage progs/mincaverage/mincaverage.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincaverage progs/mincaverage/mincaverage.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-minccalc.o `test -f 'progs/minccalc/minccalc.c' || echo './'`progs/minccalc/minccalc.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-gram.o `test -f 'progs/minccalc/gram.c' || echo './'`progs/minccalc/gram.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-eval.o `test -f 'progs/minccalc/eval.c' || echo './'`progs/minccalc/eval.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-ident.o `test -f 'progs/minccalc/ident.c' || echo './'`progs/minccalc/ident.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-lex.o `test -f 'progs/minccalc/lex.c' || echo './'`progs/minccalc/lex.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-node.o `test -f 'progs/minccalc/node.c' || echo './'`progs/minccalc/node.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-optim.o `test -f 'progs/minccalc/optim.c' || echo './'`progs/minccalc/optim.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-scalar.o `test -f 'progs/minccalc/scalar.c' || echo './'`progs/minccalc/scalar.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-sym.o `test -f 'progs/minccalc/sym.c' || echo './'`progs/minccalc/sym.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2 -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccalc/minccalc-vector.o `test -f 'progs/minccalc/vector.c' || echo './'`progs/minccalc/vector.c
/bin/bash ./libtool --tag=CC   --mode=link gcc -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o minccalc progs/minccalc/minccalc-minccalc.o progs/minccalc/minccalc-gram.o progs/minccalc/minccalc-eval.o progs/minccalc/minccalc-ident.o progs/minccalc/minccalc-lex.o progs/minccalc/minccalc-node.o progs/minccalc/minccalc-optim.o progs/minccalc/minccalc-scalar.o progs/minccalc/minccalc-sym.o progs/minccalc/minccalc-vector.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -Iprogs/minccalc -I./progs/minccalc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minccalc progs/minccalc/minccalc-minccalc.o progs/minccalc/minccalc-gram.o progs/minccalc/minccalc-eval.o progs/minccalc/minccalc-ident.o progs/minccalc/minccalc-lex.o progs/minccalc/minccalc-node.o progs/minccalc/minccalc-optim.o progs/minccalc/minccalc-scalar.o progs/minccalc/minccalc-sym.o progs/minccalc/minccalc-vector.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccmp/minccmp.o progs/minccmp/minccmp.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o minccmp progs/minccmp/minccmp.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minccmp progs/minccmp/minccmp.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincconcat/mincconcat.o progs/mincconcat/mincconcat.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincconcat progs/mincconcat/mincconcat.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincconcat progs/mincconcat/mincconcat.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minccopy/minccopy.o progs/minccopy/minccopy.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o minccopy progs/minccopy/minccopy.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minccopy progs/minccopy/minccopy.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincexpand/mincexpand.o progs/mincexpand/mincexpand.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincexpand progs/mincexpand/mincexpand.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincexpand progs/mincexpand/mincexpand.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincextract/mincextract.o progs/mincextract/mincextract.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincextract progs/mincextract/mincextract.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincextract progs/mincextract/mincextract.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/escapes.o progs/mincgen/escapes.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/genlib.o progs/mincgen/genlib.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/getfill.o progs/mincgen/getfill.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/init.o progs/mincgen/init.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/load.o progs/mincgen/load.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/main.o progs/mincgen/main.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/ncgentab.o progs/mincgen/ncgentab.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincgen/ncgenyy.o progs/mincgen/ncgenyy.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincgen progs/mincgen/escapes.o progs/mincgen/genlib.o progs/mincgen/getfill.o progs/mincgen/init.o progs/mincgen/load.o progs/mincgen/main.o progs/mincgen/ncgentab.o progs/mincgen/ncgenyy.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincgen progs/mincgen/escapes.o progs/mincgen/genlib.o progs/mincgen/getfill.o progs/mincgen/init.o progs/mincgen/load.o progs/mincgen/main.o progs/mincgen/ncgentab.o progs/mincgen/ncgenyy.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincinfo/mincinfo.o progs/mincinfo/mincinfo.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincinfo progs/mincinfo/mincinfo.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincinfo progs/mincinfo/mincinfo.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minclookup/minclookup.o progs/minclookup/minclookup.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o minclookup progs/minclookup/minclookup.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minclookup progs/minclookup/minclookup.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincmakescalar/mincmakescalar.o progs/mincmakescalar/mincmakescalar.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincmakescalar progs/mincmakescalar/mincmakescalar.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincmakescalar progs/mincmakescalar/mincmakescalar.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincmakevector/mincmakevector.o progs/mincmakevector/mincmakevector.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincmakevector progs/mincmakevector/mincmakevector.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincmakevector progs/mincmakevector/mincmakevector.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincmath/mincmath.o progs/mincmath/mincmath.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincmath progs/mincmath/mincmath.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincmath progs/mincmath/mincmath.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincresample/mincresample.o progs/mincresample/mincresample.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincresample/resample_volumes.o progs/mincresample/resample_volumes.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/Proglib/convert_origin_to_start.o progs/Proglib/convert_origin_to_start.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincresample progs/mincresample/mincresample.o progs/mincresample/resample_volumes.o progs/Proglib/convert_origin_to_start.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincresample progs/mincresample/mincresample.o progs/mincresample/resample_volumes.o progs/Proglib/convert_origin_to_start.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincreshape/mincreshape.o progs/mincreshape/mincreshape.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincreshape/copy_data.o progs/mincreshape/copy_data.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincreshape progs/mincreshape/mincreshape.o progs/mincreshape/copy_data.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincreshape progs/mincreshape/mincreshape.o progs/mincreshape/copy_data.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincstats/mincstats.o progs/mincstats/mincstats.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincstats progs/mincstats/mincstats.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincstats progs/mincstats/mincstats.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/minctoraw/minctoraw.o progs/minctoraw/minctoraw.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o minctoraw progs/minctoraw/minctoraw.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minctoraw progs/minctoraw/minctoraw.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincview/invert_raw_image.o progs/mincview/invert_raw_image.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o invert_raw_image progs/mincview/invert_raw_image.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/invert_raw_image progs/mincview/invert_raw_image.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincwindow/mincwindow.o progs/mincwindow/mincwindow.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincwindow progs/mincwindow/mincwindow.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincwindow progs/mincwindow/mincwindow.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/rawtominc/rawtominc.o progs/rawtominc/rawtominc.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o rawtominc progs/rawtominc/rawtominc.o progs/Proglib/convert_origin_to_start.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/rawtominc progs/rawtominc/rawtominc.o progs/Proglib/convert_origin_to_start.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/xfm/transformtags.o progs/xfm/transformtags.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o transformtags progs/xfm/transformtags.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/transformtags progs/xfm/transformtags.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/xfm/xfm2def.o progs/xfm/xfm2def.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o xfm2def progs/xfm/xfm2def.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/xfm2def progs/xfm/xfm2def.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/xfm/xfmconcat.o progs/xfm/xfmconcat.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o xfmconcat progs/xfm/xfmconcat.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/xfmconcat progs/xfm/xfmconcat.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/xfm/xfminvert.o progs/xfm/xfminvert.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o xfminvert progs/xfm/xfminvert.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/xfminvert progs/xfm/xfminvert.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincconvert/mincconvert.o progs/mincconvert/mincconvert.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincconvert progs/mincconvert/mincconvert.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincconvert progs/mincconvert/mincconvert.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincdump/mincdump.o progs/mincdump/mincdump.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincdump/vardata.o progs/mincdump/vardata.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincdump/dumplib.o progs/mincdump/dumplib.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincdump progs/mincdump/mincdump.o progs/mincdump/vardata.o progs/mincdump/dumplib.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincdump progs/mincdump/mincdump.o progs/mincdump/vardata.o progs/mincdump/dumplib.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/ecattominc/ecattominc.o conversion/ecattominc/ecattominc.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/ecattominc/insertblood.o conversion/ecattominc/insertblood.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/ecattominc/ecat_file.o conversion/ecattominc/ecat_file.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/ecattominc/machine_indep.o conversion/ecattominc/machine_indep.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o ecattominc conversion/ecattominc/ecattominc.o conversion/ecattominc/insertblood.o conversion/ecattominc/ecat_file.o conversion/ecattominc/machine_indep.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/ecattominc conversion/ecattominc/ecattominc.o conversion/ecattominc/insertblood.o conversion/ecattominc/ecat_file.o conversion/ecattominc/machine_indep.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/minctoecat/minctoecat.o conversion/minctoecat/minctoecat.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/minctoecat/ecat_write.o conversion/minctoecat/ecat_write.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/minctoecat/machine_indep.o conversion/minctoecat/machine_indep.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o minctoecat conversion/minctoecat/minctoecat.o conversion/minctoecat/ecat_write.o conversion/minctoecat/machine_indep.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/minctoecat conversion/minctoecat/minctoecat.o conversion/minctoecat/ecat_write.o conversion/minctoecat/machine_indep.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/nifti1/mnc2nii.o conversion/nifti1/mnc2nii.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/nifti1/nifti1_io.o conversion/nifti1/nifti1_io.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/nifti1/znzlib.o conversion/nifti1/znzlib.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mnc2nii conversion/nifti1/mnc2nii.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mnc2nii conversion/nifti1/mnc2nii.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/nifti1/nii2mnc.o conversion/nifti1/nii2mnc.c
conversion/nifti1/nii2mnc.c: In function 'main':
conversion/nifti1/nii2mnc.c:220:18: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o nii2mnc conversion/nifti1/nii2mnc.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/nii2mnc conversion/nifti1/nii2mnc.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/micropet/upet2mnc.o conversion/micropet/upet2mnc.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o upet2mnc conversion/micropet/upet2mnc.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/upet2mnc conversion/micropet/upet2mnc.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/dcm2mnc/dcm2mnc.o conversion/dcm2mnc/dcm2mnc.c
conversion/dcm2mnc/dcm2mnc.c: In function 'is_cdexport_file':
conversion/dcm2mnc/dcm2mnc.c:922:14: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
conversion/dcm2mnc/dcm2mnc.c: In function 'is_ima_file':
conversion/dcm2mnc/dcm2mnc.c:945:14: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
conversion/dcm2mnc/dcm2mnc.c: In function 'use_the_files':
conversion/dcm2mnc/dcm2mnc.c:884:23: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/dcm2mnc/dicom_to_minc.o conversion/dcm2mnc/dicom_to_minc.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/dcm2mnc/siemens_to_dicom.o conversion/dcm2mnc/siemens_to_dicom.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/dcm2mnc/dicom_read.o conversion/dcm2mnc/dicom_read.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/dcm2mnc/minc_file.o conversion/dcm2mnc/minc_file.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/dcm2mnc/progress.o conversion/dcm2mnc/progress.c
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/dcm2mnc/string_to_filename.o conversion/dcm2mnc/string_to_filename.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o dcm2mnc conversion/dcm2mnc/dcm2mnc.o conversion/dcm2mnc/dicom_to_minc.o conversion/dcm2mnc/siemens_to_dicom.o conversion/dcm2mnc/dicom_read.o conversion/dcm2mnc/minc_file.o conversion/dcm2mnc/progress.o conversion/dcm2mnc/string_to_filename.o libacr_nema.la libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/dcm2mnc conversion/dcm2mnc/dcm2mnc.o conversion/dcm2mnc/dicom_to_minc.o conversion/dcm2mnc/siemens_to_dicom.o conversion/dcm2mnc/dicom_read.o conversion/dcm2mnc/minc_file.o conversion/dcm2mnc/progress.o conversion/dcm2mnc/string_to_filename.o  ./.libs/libacr_nema.so ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/vff2mnc/vff2mnc.o conversion/vff2mnc/vff2mnc.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o vff2mnc conversion/vff2mnc/vff2mnc.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/vff2mnc conversion/vff2mnc/vff2mnc.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/acr_test.o conversion/Acr_nema/acr_test.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o acr_test conversion/Acr_nema/acr_test.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/acr_test conversion/Acr_nema/acr_test.o  ./.libs/libacr_nema.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/dump_acr_nema.o conversion/Acr_nema/dump_acr_nema.c
conversion/Acr_nema/dump_acr_nema.c: In function 'main':
conversion/Acr_nema/dump_acr_nema.c:218:33: warning: assignment from incompatible pointer type [enabled by default]
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o dump_acr_nema conversion/Acr_nema/dump_acr_nema.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/dump_acr_nema conversion/Acr_nema/dump_acr_nema.o  ./.libs/libacr_nema.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/extract_acr_nema.o conversion/Acr_nema/extract_acr_nema.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o extract_acr_nema conversion/Acr_nema/extract_acr_nema.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/extract_acr_nema conversion/Acr_nema/extract_acr_nema.o  ./.libs/libacr_nema.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/read_acr_nema.o conversion/Acr_nema/read_acr_nema.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o read_acr_nema conversion/Acr_nema/read_acr_nema.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/read_acr_nema conversion/Acr_nema/read_acr_nema.o  ./.libs/libacr_nema.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/dicom_test.o conversion/Acr_nema/dicom_test.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o dicom_test conversion/Acr_nema/dicom_test.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/dicom_test conversion/Acr_nema/dicom_test.o  ./.libs/libacr_nema.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/Acr_nema/copy_acr_nema.o conversion/Acr_nema/copy_acr_nema.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o copy_acr_nema conversion/Acr_nema/copy_acr_nema.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/copy_acr_nema conversion/Acr_nema/copy_acr_nema.o  ./.libs/libacr_nema.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/image_filters/byte_swap.o conversion/image_filters/byte_swap.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o byte_swap conversion/image_filters/byte_swap.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/byte_swap conversion/image_filters/byte_swap.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o conversion/image_filters/extract.o conversion/image_filters/extract.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o extract conversion/image_filters/extract.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/extract conversion/image_filters/extract.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincexample/mincexample1.o progs/mincexample/mincexample1.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincexample1 progs/mincexample/mincexample1.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincexample1 progs/mincexample/mincexample1.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c -o progs/mincexample/mincexample2.o progs/mincexample/mincexample2.c
/bin/bash ./libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincexample2 progs/mincexample/mincexample2.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincexample2 progs/mincexample/mincexample2.o  ./.libs/libvolume_io2.so ./.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
/usr/bin/pod2man --section=1 progs/minccomplete/minccomplete > progs/minccomplete/minccomplete.man1
/usr/bin/pod2man --section=1 progs/minchistory/minchistory > progs/minchistory/minchistory.man1
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gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc -I../../volume_io/Include -I../../volume_io/Include -I../../progs/Proglib  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c example_modify.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o example_modify example_modify.o ../../libvolume_io2.la ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
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gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc -I../../volume_io/Include -I../../volume_io/Include -I../../progs/Proglib  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c example_tags.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o example_tags example_tags.o ../../libvolume_io2.la ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/example_tags example_tags.o  ../../.libs/libvolume_io2.so ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc -I../../volume_io/Include -I../../volume_io/Include -I../../progs/Proglib  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c example_volume_io.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o example_volume_io example_volume_io.o ../../libvolume_io2.la ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/example_volume_io example_volume_io.o  ../../.libs/libvolume_io2.so ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
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cd . && chmod +x run_test_arg_parse.sh run_tests.sh run_test2.sh xfmconcat_01.sh xfmconcat_02.sh run_test_progs.sh
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   dh_auto_test -a -O--parallel
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make  test-xfm
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gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc -I../../volume_io/Include -I../../volume_io/Include -I../../progs/Proglib  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c test-xfm.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o test-xfm test-xfm.o ../../libvolume_io2.la ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
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make  check-TESTS
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Setting tolerance to 0.900000.
PASS: check_xfm.sh
=============
1 test passed
=============
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cd . && chmod +x run_test_arg_parse.sh run_tests.sh run_test2.sh xfmconcat_01.sh xfmconcat_02.sh run_test_progs.sh
make  minc test_mconv minc_types icv icv_range icv_dim test_speed icv_dim1 icv_fillvalue test_xfm create_grid_xfm mincapi test_speed test_arg_parse
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gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c minc.c
/bin/bash ../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o minc minc.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm 
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gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c test_mconv.c
/bin/bash ../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o test_mconv test_mconv.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm 
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gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c minc_types.c
/bin/bash ../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o minc_types minc_types.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm 
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gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c icv.c
/bin/bash ../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o icv icv.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/icv icv.o  ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c icv_range.c
icv_range.c: In function 'main':
icv_range.c:61:26: warning: too many arguments for format [-Wformat-extra-args]
/bin/bash ../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o icv_range icv_range.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm 
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gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c icv_dim.c
/bin/bash ../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o icv_dim icv_dim.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm 
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gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c test_speed.c
/bin/bash ../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o test_speed test_speed.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/test_speed test_speed.o  ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c icv_dim1.c
/bin/bash ../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o icv_dim1 icv_dim1.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/icv_dim1 icv_dim1.o  ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c icv_fillvalue.c
/bin/bash ../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o icv_fillvalue icv_fillvalue.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/icv_fillvalue icv_fillvalue.o  ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c test_xfm.c
/bin/bash ../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o test_xfm test_xfm.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/test_xfm test_xfm.o  ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c create_grid_xfm.c
/bin/bash ../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o create_grid_xfm create_grid_xfm.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/create_grid_xfm create_grid_xfm.o  ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c mincapi.c
/bin/bash ../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o mincapi mincapi.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/mincapi mincapi.o  ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
make[3]: `test_speed' is up to date.
gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -I../volume_io/Include -I../volume_io/Include  -D_FORTIFY_SOURCE=2  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c test_arg_parse.c
/bin/bash ../libtool --tag=CC   --mode=link gcc  -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o test_arg_parse test_arg_parse.o ../libvolume_io2.la ../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/test_arg_parse test_arg_parse.o  ../.libs/libvolume_io2.so ../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
make[3]: Leaving directory `/«PKGBUILDDIR»/testdir'
make  check-TESTS
make[3]: Entering directory `/«PKGBUILDDIR»/testdir'
PASS: run_test_arg_parse.sh
Testing minc_types
Testing icv_range
Testing icv
Testing icv_dim
Testing icv_dim1
Testing icv_fillvalue
PASS: run_tests.sh
Testing minc_types
Testing icv_range
Testing icv
Testing icv_dim
Testing icv_dim1
Testing icv_fillvalue
PASS: run_test2.sh
PASS: xfmconcat_01.sh
PASS: xfmconcat_02.sh
**** Tests completed with no errors
PASS: mincapi
PASS: run_test_progs.sh
==================
All 7 tests passed
==================
make[3]: Leaving directory `/«PKGBUILDDIR»/testdir'
make[2]: Leaving directory `/«PKGBUILDDIR»/testdir'
Making check in doc
make[2]: Entering directory `/«PKGBUILDDIR»/doc'
make[2]: Nothing to be done for `check'.
make[2]: Leaving directory `/«PKGBUILDDIR»/doc'
Making check in libsrc2/test
make[2]: Entering directory `/«PKGBUILDDIR»/libsrc2/test'
cd . && chmod +x testminctools.sh
make  create-test-images create-test-images-2 datatype-test dimension-test full-test grpattr-test hyper-test hyper-test-2 label-test record-test slice-test valid-test volprops-test multires-test convert-test vector_dimension-test
make[3]: Entering directory `/«PKGBUILDDIR»/libsrc2/test'
gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c create-test-images.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o create-test-images create-test-images.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/create-test-images create-test-images.o  ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c create-test-images-2.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o create-test-images-2 create-test-images-2.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/create-test-images-2 create-test-images-2.o  ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c datatype-test.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o datatype-test datatype-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/datatype-test datatype-test.o  ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c dimension-test.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o dimension-test dimension-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/dimension-test dimension-test.o  ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c full-test.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o full-test full-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/full-test full-test.o  ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c grpattr-test.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o grpattr-test grpattr-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/grpattr-test grpattr-test.o  ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c hyper-test.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o hyper-test hyper-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/hyper-test hyper-test.o  ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c hyper-test-2.c
hyper-test-2.c: In function 'main':
hyper-test-2.c:153:5: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat]
hyper-test-2.c:153:5: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat]
hyper-test-2.c:153:5: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long unsigned int' [-Wformat]
hyper-test-2.c:154:5: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat]
hyper-test-2.c:154:5: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat]
hyper-test-2.c:154:5: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long unsigned int' [-Wformat]
hyper-test-2.c:164:5: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat]
hyper-test-2.c:164:5: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat]
hyper-test-2.c:164:5: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long unsigned int' [-Wformat]
hyper-test-2.c:178:5: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat]
hyper-test-2.c:178:5: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat]
hyper-test-2.c:178:5: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long unsigned int' [-Wformat]
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o hyper-test-2 hyper-test-2.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/hyper-test-2 hyper-test-2.o  ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c label-test.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o label-test label-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/label-test label-test.o  ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c record-test.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o record-test record-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/record-test record-test.o  ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c slice-test.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o slice-test slice-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/slice-test slice-test.o  ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c valid-test.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o valid-test valid-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/valid-test valid-test.o  ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c volprops-test.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o volprops-test volprops-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
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gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c multires-test.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o multires-test multires-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
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gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c convert-test.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o convert-test convert-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
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gcc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc2  -D_FORTIFY_SOURCE=2 -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -c vector_dimension-test.c
/bin/bash ../../libtool --tag=CC   --mode=link gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security  -Wl,-z,relro -o vector_dimension-test vector_dimension-test.o ../../libminc2.la -lhdf5 -lz -lnetcdf -lm 
libtool: link: gcc -DAPPARENTORDER -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wl,-z -Wl,relro -o .libs/vector_dimension-test vector_dimension-test.o  ../../.libs/libminc2.so -lhdf5 -lz -lnetcdf -lm
make[3]: Leaving directory `/«PKGBUILDDIR»/libsrc2/test'
make  check-TESTS
make[3]: Entering directory `/«PKGBUILDDIR»/libsrc2/test'

 No errors
Creating 2D image with IRREGULAR sample dimension!! (2D_image.mnc)
Creating 3D image with slice scaling!! (3D_image.mnc)
Creating 4D image with slice scaling!! (4D_image.mnc)
PASS: create-test-images

 No errors
Creating 3D image REAL stored as INT w/ slice scaling!! (real_as_int_image.mnc)
Creating 3D image REAL stored as FLOAT w/ slice scaling!! (real_as_float_image.mnc)
PASS: create-test-images-2
PASS: datatype-test
No errors
PASS: dimension-test
No errors
PASS: full-test
No errors
***************** 
PASS: grpattr-test
miget_real_value_hyperslab()
miget_voxel_value_hyperslab, default dimensions
miget_voxel_value_hyperslab(), swapped dimensions
miget_voxel_hyperslab, reversed Z axis
Read 3x2x2 matrices of voxel values:
miget_hyperslab_normalized()
read and write entire hyperslab:
Read and verify hyperslab in original dimension order:
No errors
PASS: hyper-test

 No errors
Creating image with slice scaling!! 
Opening hyperslab-test2.mnc! 
Sizes: 210, 245, 142

Getting a real value hyperslab 
Starting at 4, 3, 5 
Extending to 120, 180, 110 

Test arbitrary location 70, 100, 104 
Test from hyperslab: 9.519348 
Test from voxel scaled: 9.519348
Test voxel value itself: 634.000000

HMMMMMMMMMM! let's try something else 

Test arbitrary location 104, 100, 70 
Test from hyperslab: 6.105524 
Test from voxel scaled: 6.105524
Test voxel value itself: 181.000000
PASS: hyper-test-2
No errors
Creating label image !! 
 0 
 6 
Number of defined labels 6 
Print label file with file order x,y,z 
       0   ffffff   808080   ff0000     ff00       ff  
       0   ffffff   808080   ff0000     ff00       ff  
       0   ffffff   808080   ff0000     ff00       ff  
       0   ffffff   808080   ff0000     ff00       ff  
Print label file with apparent order z,y,x 
       0   808080     ff00   808080     ff00        0  
    ff00        0   808080        0   808080     ff00  
  ffffff   ff0000       ff   ff0000       ff   ffffff  
      ff   ffffff   ff0000   ffffff   ff0000       ff  
PASS: label-test
No errors
PASS: record-test
PASS: slice-test
PASS: valid-test
No errors
Multiresolution enabled: 1 depth: 2 
Set compression type to 0
Got compression type 0 
Set zlib level to 4
Got zlib level 4 
PASS: volprops-test
No errors
Creating volume...
Writing data...
Selecting half-size image
Selecting quarter-size image
Return to full resolution.
Flush any remaining thumbnails.
PASS: multires-test
No errors
PASS: convert-test
No errors
 
Opening vector-dimension file!
 
Total number of dimensions : 4 
Dimension Size in file order :  41  410  530  3  
Dim class RECORD present check dim name for *vector_dimension*
Let's get the first 10 data values of each vector component (file order) 
 FILE ORDER --> zspace, yspace, xspace, vector_dimension 
Vector Componenet 1 
 0  3  6  9  12  15  18  21  24  27  
Vector Componenet 2 
 1  4  7  10  13  16  19  22  25  28  
Vector Componenet 3 
 2  5  8  11  14  17  20  23  26  29  
APPARENT ORDER --> vector_dimension, zspace, yspace, xspace
APPARENT ORDER SET 
Vector Componenet 1 
 0  3  6  9  12  15  18  21  24  27  
Vector Componenet 2 
 1  4  7  10  13  16  19  22  25  28  
Vector Componenet 3 
 2  5  8  11  14  17  20  23  26  29  
PASS: vector_dimension-test
Converted file to MINC2.0 format.
Version: 2 (HDF5)
file: t3_grid_0_2.mnc
image: signed__ short -32766 to 32766
image dimensions: vector_dimension zspace yspace xspace
    dimension name         length         step        start
    --------------         ------         ----        -----
    vector_dimension            3      unknown      unknown
    zspace                      1            1           55
    yspace                    256            1       -145.5
    xspace                    224            1       -111.5
About to loop, max_buffer is 4194304
Processing:...Done
Statistics on image
About to loop, max_buffer is 4194304
Mean:              1.29318327
Stddev:            3.477269548
Adding const 2 to all three channels.
About to loop, max_buffer is 4194304
Processing:...Done
Statistics on image with added constant
About to loop, max_buffer is 4194304
Mean:              3.29318327
Stddev:            3.477269548
Resampling file with t1.xfm transform
Transforming slices:...Done
Transformed file
file: t32_transformed.mnc
image: signed__ short -32766 to 32766
image dimensions: vector_dimension zspace yspace xspace
    dimension name         length         step        start
    --------------         ------         ----        -----
    vector_dimension            3      unknown      unknown
    zspace                      1            1           85
    yspace                    256            1       -125.5
    xspace                    224            1       -101.5
PASS: testminctools.sh
===================
All 17 tests passed
===================
make[3]: Leaving directory `/«PKGBUILDDIR»/libsrc2/test'
make[2]: Leaving directory `/«PKGBUILDDIR»/libsrc2/test'
make[1]: Leaving directory `/«PKGBUILDDIR»'
 fakeroot debian/rules binary-arch
dh binary-arch --parallel --with autotools_dev
   dh_testroot -a -O--parallel
   dh_prep -a -O--parallel
   dh_installdirs -a -O--parallel
   dh_auto_install -a -O--parallel
make[1]: Entering directory `/«PKGBUILDDIR»'
Making install in .
make[2]: Entering directory `/«PKGBUILDDIR»'
make[3]: Entering directory `/«PKGBUILDDIR»'
test -z "/usr/lib/arm-linux-gnueabihf" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf"
 /bin/bash ./libtool   --mode=install /usr/bin/install -c   libminc2.la libvolume_io2.la libacr_nema.la '/«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/libminc2.so.1.1.3 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc2.so.1.1.3
libtool: install: (cd /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libminc2.so.1.1.3 libminc2.so.1 || { rm -f libminc2.so.1 && ln -s libminc2.so.1.1.3 libminc2.so.1; }; })
libtool: install: (cd /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libminc2.so.1.1.3 libminc2.so || { rm -f libminc2.so && ln -s libminc2.so.1.1.3 libminc2.so; }; })
libtool: install: /usr/bin/install -c .libs/libminc2.lai /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc2.la
libtool: install: /usr/bin/install -c .libs/libvolume_io2.so.1.1.2 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2
libtool: install: (cd /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libvolume_io2.so.1.1.2 libvolume_io2.so.1 || { rm -f libvolume_io2.so.1 && ln -s libvolume_io2.so.1.1.2 libvolume_io2.so.1; }; })
libtool: install: (cd /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libvolume_io2.so.1.1.2 libvolume_io2.so || { rm -f libvolume_io2.so && ln -s libvolume_io2.so.1.1.2 libvolume_io2.so; }; })
libtool: install: /usr/bin/install -c .libs/libvolume_io2.lai /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libvolume_io2.la
libtool: install: /usr/bin/install -c .libs/libacr_nema.so.0.0.0 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libacr_nema.so.0.0.0
libtool: install: (cd /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libacr_nema.so.0.0.0 libacr_nema.so.0 || { rm -f libacr_nema.so.0 && ln -s libacr_nema.so.0.0.0 libacr_nema.so.0; }; })
libtool: install: (cd /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libacr_nema.so.0.0.0 libacr_nema.so || { rm -f libacr_nema.so && ln -s libacr_nema.so.0.0.0 libacr_nema.so; }; })
libtool: install: /usr/bin/install -c .libs/libacr_nema.lai /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libacr_nema.la
libtool: install: /usr/bin/install -c .libs/libminc2.a /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc2.a
libtool: install: chmod 644 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc2.a
libtool: install: ranlib /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libminc2.a
libtool: install: /usr/bin/install -c .libs/libvolume_io2.a /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libvolume_io2.a
libtool: install: chmod 644 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libvolume_io2.a
libtool: install: ranlib /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libvolume_io2.a
libtool: install: /usr/bin/install -c .libs/libacr_nema.a /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libacr_nema.a
libtool: install: chmod 644 /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libacr_nema.a
libtool: install: ranlib /«PKGBUILDDIR»/debian/tmp/usr/lib/arm-linux-gnueabihf/libacr_nema.a
libtool: install: warning: remember to run `libtool --finish /usr/lib/arm-linux-gnueabihf'
test -z "/usr/bin" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/bin"
  /bin/bash ./libtool   --mode=install /usr/bin/install -c voxeltoworld worldtovoxel minc_modify_header mincaverage minccalc minccmp mincconcat minccopy mincexpand mincextract mincgen mincinfo minclookup mincmakescalar mincmakevector mincmath mincresample mincreshape mincstats minctoraw invert_raw_image mincwindow rawtominc transformtags xfm2def xfmconcat xfminvert mincconvert mincdump ecattominc minctoecat mnc2nii nii2mnc upet2mnc dcm2mnc vff2mnc acr_test dump_acr_nema extract_acr_nema read_acr_nema dicom_test copy_acr_nema byte_swap extract '/«PKGBUILDDIR»/debian/tmp/usr/bin'
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/voxeltoworld /«PKGBUILDDIR»/debian/tmp/usr/bin/voxeltoworld
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/worldtovoxel /«PKGBUILDDIR»/debian/tmp/usr/bin/worldtovoxel
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/minc_modify_header /«PKGBUILDDIR»/debian/tmp/usr/bin/minc_modify_header
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincaverage /«PKGBUILDDIR»/debian/tmp/usr/bin/mincaverage
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/minccalc /«PKGBUILDDIR»/debian/tmp/usr/bin/minccalc
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/minccmp /«PKGBUILDDIR»/debian/tmp/usr/bin/minccmp
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincconcat /«PKGBUILDDIR»/debian/tmp/usr/bin/mincconcat
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/minccopy /«PKGBUILDDIR»/debian/tmp/usr/bin/minccopy
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincexpand /«PKGBUILDDIR»/debian/tmp/usr/bin/mincexpand
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincextract /«PKGBUILDDIR»/debian/tmp/usr/bin/mincextract
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincgen /«PKGBUILDDIR»/debian/tmp/usr/bin/mincgen
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincinfo /«PKGBUILDDIR»/debian/tmp/usr/bin/mincinfo
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/minclookup /«PKGBUILDDIR»/debian/tmp/usr/bin/minclookup
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincmakescalar /«PKGBUILDDIR»/debian/tmp/usr/bin/mincmakescalar
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincmakevector /«PKGBUILDDIR»/debian/tmp/usr/bin/mincmakevector
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincmath /«PKGBUILDDIR»/debian/tmp/usr/bin/mincmath
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincresample /«PKGBUILDDIR»/debian/tmp/usr/bin/mincresample
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincreshape /«PKGBUILDDIR»/debian/tmp/usr/bin/mincreshape
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincstats /«PKGBUILDDIR»/debian/tmp/usr/bin/mincstats
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/minctoraw /«PKGBUILDDIR»/debian/tmp/usr/bin/minctoraw
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/invert_raw_image /«PKGBUILDDIR»/debian/tmp/usr/bin/invert_raw_image
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincwindow /«PKGBUILDDIR»/debian/tmp/usr/bin/mincwindow
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/rawtominc /«PKGBUILDDIR»/debian/tmp/usr/bin/rawtominc
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/transformtags /«PKGBUILDDIR»/debian/tmp/usr/bin/transformtags
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/xfm2def /«PKGBUILDDIR»/debian/tmp/usr/bin/xfm2def
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/xfmconcat /«PKGBUILDDIR»/debian/tmp/usr/bin/xfmconcat
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/xfminvert /«PKGBUILDDIR»/debian/tmp/usr/bin/xfminvert
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincconvert /«PKGBUILDDIR»/debian/tmp/usr/bin/mincconvert
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mincdump /«PKGBUILDDIR»/debian/tmp/usr/bin/mincdump
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/ecattominc /«PKGBUILDDIR»/debian/tmp/usr/bin/ecattominc
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/minctoecat /«PKGBUILDDIR»/debian/tmp/usr/bin/minctoecat
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/mnc2nii /«PKGBUILDDIR»/debian/tmp/usr/bin/mnc2nii
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/nii2mnc /«PKGBUILDDIR»/debian/tmp/usr/bin/nii2mnc
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/upet2mnc /«PKGBUILDDIR»/debian/tmp/usr/bin/upet2mnc
libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/dcm2mnc /«PKGBUILDDIR»/debian/tmp/usr/bin/dcm2mnc
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/vff2mnc /«PKGBUILDDIR»/debian/tmp/usr/bin/vff2mnc
libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/acr_test /«PKGBUILDDIR»/debian/tmp/usr/bin/acr_test
libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/dump_acr_nema /«PKGBUILDDIR»/debian/tmp/usr/bin/dump_acr_nema
libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/extract_acr_nema /«PKGBUILDDIR»/debian/tmp/usr/bin/extract_acr_nema
libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/read_acr_nema /«PKGBUILDDIR»/debian/tmp/usr/bin/read_acr_nema
libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/dicom_test /«PKGBUILDDIR»/debian/tmp/usr/bin/dicom_test
libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/copy_acr_nema /«PKGBUILDDIR»/debian/tmp/usr/bin/copy_acr_nema
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/byte_swap /«PKGBUILDDIR»/debian/tmp/usr/bin/byte_swap
libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/extract /«PKGBUILDDIR»/debian/tmp/usr/bin/extract
test -z "/usr/bin" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/bin"
 /usr/bin/install -c progs/minccomplete/minccomplete progs/minchistory/minchistory progs/xfm/xfmflip '/«PKGBUILDDIR»/debian/tmp/usr/bin'
test -z "/usr/bin" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/bin"
 /usr/bin/install -c progs/mincdiff/mincdiff progs/mincedit/mincedit progs/mincheader/mincheader progs/mincpik/mincpik progs/mincview/mincview '/«PKGBUILDDIR»/debian/tmp/usr/bin'
test -z "/usr/include" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/include"
 /usr/bin/install -c -m 644 libsrc/minc.h libsrc/ParseArgv.h libsrc/voxel_loop.h libsrc/nd_loop.h libsrc/time_stamp.h libsrc/minc_compat.h volume_io/Include/volume_io.h libsrc2/minc2.h libsrc/minc_simple.h conversion/Acr_nema/acr_nema.h '/«PKGBUILDDIR»/debian/tmp/usr/include'
test -z "/usr/include/acr_nema" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/include/acr_nema"
 /usr/bin/install -c -m 644 conversion/Acr_nema/acr_nema/acr_io.h conversion/Acr_nema/acr_nema/dicom_client_routines.h conversion/Acr_nema/acr_nema/dicom_network.h conversion/Acr_nema/acr_nema/element.h conversion/Acr_nema/acr_nema/file_io.h conversion/Acr_nema/acr_nema/group.h conversion/Acr_nema/acr_nema/message.h conversion/Acr_nema/acr_nema/value_repr.h '/«PKGBUILDDIR»/debian/tmp/usr/include/acr_nema'
test -z "/usr/include/volume_io" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/include/volume_io"
 /usr/bin/install -c -m 644 volume_io/Include/volume_io/alloc.h volume_io/Include/volume_io/arrays.h volume_io/Include/volume_io/basic.h volume_io/Include/volume_io/def_math.h volume_io/Include/volume_io/files.h volume_io/Include/volume_io/geom_structs.h volume_io/Include/volume_io/geometry.h volume_io/Include/internal_volume_io.h volume_io/Include/volume_io/multidim.h volume_io/Include/volume_io/progress.h volume_io/Include/volume_io/string_funcs.h volume_io/Include/volume_io/system_dependent.h volume_io/Include/volume_io/transforms.h volume_io/Include/volume_io/vol_io_prototypes.h volume_io/Include/volume_io/volume.h volume_io/Include/volume_io/volume_cache.h '/«PKGBUILDDIR»/debian/tmp/usr/include/volume_io'
test -z "/usr/share/man/man1" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1"
 /usr/bin/install -c -m 644 'progs/coordinates/voxeltoworld.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/voxeltoworld.1'
 /usr/bin/install -c -m 644 'progs/minc_modify_header/minc_modify_header.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minc_modify_header.1'
 /usr/bin/install -c -m 644 'progs/mincaverage/mincaverage.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincaverage.1'
 /usr/bin/install -c -m 644 'progs/minccalc/minccalc.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minccalc.1'
 /usr/bin/install -c -m 644 'progs/minccomplete/minccomplete.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minccomplete.1'
 /usr/bin/install -c -m 644 'progs/mincconcat/mincconcat.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincconcat.1'
 /usr/bin/install -c -m 644 'progs/minccmp/minccmp.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minccmp.1'
 /usr/bin/install -c -m 644 'progs/minccopy/minccopy.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minccopy.1'
 /usr/bin/install -c -m 644 'progs/mincdiff/mincdiff.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincdiff.1'
 /usr/bin/install -c -m 644 'progs/mincedit/mincedit.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincedit.1'
 /usr/bin/install -c -m 644 'progs/mincexpand/mincexpand.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincexpand.1'
 /usr/bin/install -c -m 644 'progs/mincextract/mincextract.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincextract.1'
 /usr/bin/install -c -m 644 'progs/mincgen/mincgen.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincgen.1'
 /usr/bin/install -c -m 644 'progs/mincheader/mincheader.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincheader.1'
 /usr/bin/install -c -m 644 'progs/minchistory/minchistory.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minchistory.1'
 /usr/bin/install -c -m 644 'progs/mincinfo/mincinfo.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincinfo.1'
 /usr/bin/install -c -m 644 'progs/minclookup/minclookup.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minclookup.1'
 /usr/bin/install -c -m 644 'progs/mincmakescalar/mincmakescalar.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincmakescalar.1'
 /usr/bin/install -c -m 644 'progs/mincmakevector/mincmakevector.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincmakevector.1'
 /usr/bin/install -c -m 644 'progs/mincmath/mincmath.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincmath.1'
 /usr/bin/install -c -m 644 'progs/mincpik/mincpik.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincpik.1'
 /usr/bin/install -c -m 644 'progs/mincresample/mincresample.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincresample.1'
 /usr/bin/install -c -m 644 'progs/mincreshape/mincreshape.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincreshape.1'
 /usr/bin/install -c -m 644 'progs/mincstats/mincstats.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincstats.1'
 /usr/bin/install -c -m 644 'progs/minctoraw/minctoraw.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minctoraw.1'
 /usr/bin/install -c -m 644 'progs/mincview/invert_raw_image.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/invert_raw_image.1'
 /usr/bin/install -c -m 644 'progs/mincview/mincview.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincview.1'
 /usr/bin/install -c -m 644 'progs/mincwindow/mincwindow.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincwindow.1'
 /usr/bin/install -c -m 644 'progs/rawtominc/rawtominc.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/rawtominc.1'
 /usr/bin/install -c -m 644 'progs/xfm/transformtags.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/transformtags.1'
 /usr/bin/install -c -m 644 'progs/xfm/xfm2def.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/xfm2def.1'
 /usr/bin/install -c -m 644 'progs/xfm/xfmconcat.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/xfmconcat.1'
 /usr/bin/install -c -m 644 'progs/xfm/xfminvert.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/xfminvert.1'
 /usr/bin/install -c -m 644 'progs/xfm/xfmflip.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/xfmflip.1'
 /usr/bin/install -c -m 644 'progs/mincconvert/mincconvert.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mincconvert.1'
 /usr/bin/install -c -m 644 'conversion/ecattominc/ecattominc.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/ecattominc.1'
 /usr/bin/install -c -m 644 'conversion/minctoecat/minctoecat.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/minctoecat.1'
 /usr/bin/install -c -m 644 'conversion/nifti1/nii2mnc.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/nii2mnc.1'
 /usr/bin/install -c -m 644 'conversion/nifti1/mnc2nii.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/mnc2nii.1'
 /usr/bin/install -c -m 644 'conversion/micropet/upet2mnc.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/upet2mnc.1'
 /usr/bin/install -c -m 644 'conversion/dcm2mnc/dcm2mnc.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/dcm2mnc.1'
 /usr/bin/install -c -m 644 'conversion/vff2mnc/vff2mnc.man1' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man1/vff2mnc.1'
test -z "/usr/share/man/man3" || /bin/mkdir -p "/«PKGBUILDDIR»/debian/tmp/usr/share/man/man3"
 /usr/bin/install -c -m 644 'libsrc/ParseArgv.man3' '/«PKGBUILDDIR»/debian/tmp/usr/share/man/man3/ParseArgv.3'
make[3]: Leaving directory `/«PKGBUILDDIR»'
make[2]: Leaving directory `/«PKGBUILDDIR»'
Making install in volume_io
make[2]: Entering directory `/«PKGBUILDDIR»/volume_io'
Making install in Documentation
make[3]: Entering directory `/«PKGBUILDDIR»/volume_io/Documentation'
make[4]: Entering directory `/«PKGBUILDDIR»/volume_io/Documentation'
make[4]: Nothing to be done for `install-exec-am'.
make[4]: Nothing to be done for `install-data-am'.
make[4]: Leaving directory `/«PKGBUILDDIR»/volume_io/Documentation'
make[3]: Leaving directory `/«PKGBUILDDIR»/volume_io/Documentation'
Making install in Testing
make[3]: Entering directory `/«PKGBUILDDIR»/volume_io/Testing'
make[4]: Entering directory `/«PKGBUILDDIR»/volume_io/Testing'
make[4]: Nothing to be done for `install-exec-am'.
make[4]: Nothing to be done for `install-data-am'.
make[4]: Leaving directory `/«PKGBUILDDIR»/volume_io/Testing'
make[3]: Leaving directory `/«PKGBUILDDIR»/volume_io/Testing'
make[3]: Entering directory `/«PKGBUILDDIR»/volume_io'
make[4]: Entering directory `/«PKGBUILDDIR»/volume_io'
make[4]: Nothing to be done for `install-exec-am'.
make[4]: Nothing to be done for `install-data-am'.
make[4]: Leaving directory `/«PKGBUILDDIR»/volume_io'
make[3]: Leaving directory `/«PKGBUILDDIR»/volume_io'
make[2]: Leaving directory `/«PKGBUILDDIR»/volume_io'
Making install in testdir
make[2]: Entering directory `/«PKGBUILDDIR»/testdir'
cd . && chmod +x run_test_arg_parse.sh run_tests.sh run_test2.sh xfmconcat_01.sh xfmconcat_02.sh run_test_progs.sh
make[3]: Entering directory `/«PKGBUILDDIR»/testdir'
make[3]: Nothing to be done for `install-exec-am'.
make[3]: Nothing to be done for `install-data-am'.
make[3]: Leaving directory `/«PKGBUILDDIR»/testdir'
make[2]: Leaving directory `/«PKGBUILDDIR»/testdir'
Making install in doc
make[2]: Entering directory `/«PKGBUILDDIR»/doc'
make[3]: Entering directory `/«PKGBUILDDIR»/doc'
make[3]: Nothing to be done for `install-exec-am'.
make[3]: Nothing to be done for `install-data-am'.
make[3]: Leaving directory `/«PKGBUILDDIR»/doc'
make[2]: Leaving directory `/«PKGBUILDDIR»/doc'
Making install in libsrc2/test
make[2]: Entering directory `/«PKGBUILDDIR»/libsrc2/test'
cd . && chmod +x testminctools.sh
make[3]: Entering directory `/«PKGBUILDDIR»/libsrc2/test'
make[3]: Nothing to be done for `install-exec-am'.
make[3]: Nothing to be done for `install-data-am'.
make[3]: Leaving directory `/«PKGBUILDDIR»/libsrc2/test'
make[2]: Leaving directory `/«PKGBUILDDIR»/libsrc2/test'
make[1]: Leaving directory `/«PKGBUILDDIR»'
   debian/rules override_dh_install
make[1]: Entering directory `/«PKGBUILDDIR»'
/usr/bin/make -C doc docs
make[2]: Entering directory `/«PKGBUILDDIR»/doc'
latex prog_ref.tex
This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian)
 restricted \write18 enabled.
entering extended mode
(./prog_ref.tex
LaTeX2e <2011/06/27>
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(/usr/share/texlive/texmf-dist/tex/latex/base/article.cls
Document Class: article 2007/10/19 v1.4h Standard LaTeX document class
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No file prog_ref.aux.
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[1] [2] [3] [4] [5] [6] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd
) [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] (./prog_ref.aux) )
Output written on prog_ref.dvi (18 pages, 57980 bytes).
Transcript written on prog_ref.log.
latex prog_ref.tex
This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian)
 restricted \write18 enabled.
entering extended mode
(./prog_ref.tex
LaTeX2e <2011/06/27>
Babel <v3.8m> and hyphenation patterns for english, dumylang, nohyphenation, lo
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(/usr/share/texlive/texmf-dist/tex/latex/base/article.cls
Document Class: article 2007/10/19 v1.4h Standard LaTeX document class
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Output written on prog_ref.dvi (18 pages, 64764 bytes).
Transcript written on prog_ref.log.
dvips prog_ref.dvi -o prog_ref.ps
This is dvips(k) 5.991 Copyright 2011 Radical Eye Software (www.radicaleye.com)
' TeX output 2012.05.22:0501' -> prog_ref.ps
</usr/share/texlive/texmf/dvips/base/tex.pro>
</usr/share/texlive/texmf/dvips/base/texps.pro>. 
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb>
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[2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] 
latex prog_guide.tex
This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian)
 restricted \write18 enabled.
entering extended mode
(./prog_guide.tex
LaTeX2e <2011/06/27>
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aded.
(/usr/share/texlive/texmf-dist/tex/latex/base/article.cls
Document Class: article 2007/10/19 v1.4h Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo))
No file prog_guide.aux.
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[6] [7] [8] [9] [10] [11] [12] (./prog_guide.aux) )
Output written on prog_guide.dvi (12 pages, 42568 bytes).
Transcript written on prog_guide.log.
latex prog_guide.tex
This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian)
 restricted \write18 enabled.
entering extended mode
(./prog_guide.tex
LaTeX2e <2011/06/27>
Babel <v3.8m> and hyphenation patterns for english, dumylang, nohyphenation, lo
aded.
(/usr/share/texlive/texmf-dist/tex/latex/base/article.cls
Document Class: article 2007/10/19 v1.4h Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (./prog_guide.aux)
(./prog_guide.toc) [1] [2] [3] [4] [5]
(/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [6] [7] [8] [9]
[10] [11] [12] (./prog_guide.aux) )
Output written on prog_guide.dvi (12 pages, 50236 bytes).
Transcript written on prog_guide.log.
dvips prog_guide.dvi -o prog_guide.ps
This is dvips(k) 5.991 Copyright 2011 Radical Eye Software (www.radicaleye.com)
' TeX output 2012.05.22:0501' -> prog_guide.ps
</usr/share/texlive/texmf/dvips/base/tex.pro>
</usr/share/texlive/texmf/dvips/base/texps.pro>. 
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmex10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi7.pfb>
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</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmbx10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr12.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr17.pfb>[1] 
[2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] 
make[2]: Leaving directory `/«PKGBUILDDIR»/doc'
/usr/bin/make -C volume_io/Documentation docs
make[2]: Entering directory `/«PKGBUILDDIR»/volume_io/Documentation'
latex volume_io.tex
This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian)
 restricted \write18 enabled.
entering extended mode
(./volume_io.tex
LaTeX2e <2011/06/27>
Babel <v3.8m> and hyphenation patterns for english, dumylang, nohyphenation, lo
aded.
(/usr/share/texlive/texmf-dist/tex/latex/base/latex209.def

          Entering LaTeX 2.09 COMPATIBILITY MODE
 *************************************************************
    !!WARNING!!    !!WARNING!!    !!WARNING!!    !!WARNING!!   
 
 This mode attempts to provide an emulation of the LaTeX 2.09
 author environment so that OLD documents can be successfully
 processed. It should NOT be used for NEW documents!
 
 New documents should use Standard LaTeX conventions and start
 with the \documentclass command.
 
 Compatibility mode is UNLIKELY TO WORK with LaTeX 2.09 style
 files that change any internal macros, especially not with
 those that change the FONT SELECTION or OUTPUT ROUTINES.
 
 Therefore such style files MUST BE UPDATED to use
          Current Standard LaTeX: LaTeX2e.
 If you suspect that you may be using such a style file, which
 is probably very, very old by now, then you should attempt to
 get it updated by sending a copy of this error message to the
 author of that file.
 *************************************************************

(/usr/share/texlive/texmf-dist/tex/latex/base/tracefnt.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/latexsym.sty))
(/usr/share/texlive/texmf-dist/tex/latex/base/report.cls
Document Class: report 2007/10/19 v1.4h Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo))
No file volume_io.aux.
(/usr/share/texlive/texmf-dist/tex/latex/base/ulasy.fd) [0]
No file volume_io.toc.
[1]
Chapter 1.
[2]
Chapter 2.
[3]
Chapter 3.
[4] [5]
Chapter 4.
[6] [7] [8] [9]
Chapter 5.
[10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24]
[25] [26]
Chapter 6.
[27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41]
[42] [43] [44] [45] [46] [47] [48] [49] [50]
Chapter 7.
[51] [52] [53] [54] [55] [56]
Chapter 8.
[57] [58] [59] [60] [61] [62] [63]
Chapter 9.
[64] [65] [66] (./volume_io.aux) )
Output written on volume_io.dvi (67 pages, 138128 bytes).
Transcript written on volume_io.log.
latex volume_io.tex
This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2012/dev/Debian)
 restricted \write18 enabled.
entering extended mode
(./volume_io.tex
LaTeX2e <2011/06/27>
Babel <v3.8m> and hyphenation patterns for english, dumylang, nohyphenation, lo
aded.
(/usr/share/texlive/texmf-dist/tex/latex/base/latex209.def

          Entering LaTeX 2.09 COMPATIBILITY MODE
 *************************************************************
    !!WARNING!!    !!WARNING!!    !!WARNING!!    !!WARNING!!   
 
 This mode attempts to provide an emulation of the LaTeX 2.09
 author environment so that OLD documents can be successfully
 processed. It should NOT be used for NEW documents!
 
 New documents should use Standard LaTeX conventions and start
 with the \documentclass command.
 
 Compatibility mode is UNLIKELY TO WORK with LaTeX 2.09 style
 files that change any internal macros, especially not with
 those that change the FONT SELECTION or OUTPUT ROUTINES.
 
 Therefore such style files MUST BE UPDATED to use
          Current Standard LaTeX: LaTeX2e.
 If you suspect that you may be using such a style file, which
 is probably very, very old by now, then you should attempt to
 get it updated by sending a copy of this error message to the
 author of that file.
 *************************************************************

(/usr/share/texlive/texmf-dist/tex/latex/base/tracefnt.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/latexsym.sty))
(/usr/share/texlive/texmf-dist/tex/latex/base/report.cls
Document Class: report 2007/10/19 v1.4h Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (./volume_io.aux)
(/usr/share/texlive/texmf-dist/tex/latex/base/ulasy.fd) [0] (./volume_io.toc
[1]) [2]
Chapter 1.
[3]
Chapter 2.
[4]
Chapter 3.
[5] [6]
Chapter 4.
[7] [8] [9] [10]
Chapter 5.
[11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25]
[26] [27]
Chapter 6.
[28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42]
[43] [44] [45] [46] [47] [48] [49] [50] [51]
Chapter 7.
[52] [53] [54] [55] [56] [57]
Chapter 8.
[58] [59] [60] [61] [62] [63] [64]
Chapter 9.
[65] [66] [67] (./volume_io.aux) )
Output written on volume_io.dvi (68 pages, 146956 bytes).
Transcript written on volume_io.log.
dvips volume_io.dvi -o volume_io.ps
This is dvips(k) 5.991 Copyright 2011 Radical Eye Software (www.radicaleye.com)
' TeX output 2012.05.22:0501' -> volume_io.ps
</usr/share/texlive/texmf/dvips/base/tex.pro>
</usr/share/texlive/texmf/dvips/base/texps.pro>. 
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt9.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmbx12.pfb>
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</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmbx10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr12.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr17.pfb>[0] 
[1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] 
[18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32] 
[33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] 
[48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] 
[63] [64] [65] [66] [67] 
make[2]: Leaving directory `/«PKGBUILDDIR»/volume_io/Documentation'
# minc-tools
rm -f debian/tmp/usr/bin/byte_swap
rm -f debian/tmp/usr/bin/extract
rm -f debian/tmp/usr/bin/acr_test
rm -f debian/tmp/usr/bin/dicom_test
dh_install -pminc-tools --autodest debian/tmp/usr/bin
dh_install -pminc-tools --autodest debian/tmp/usr/share/man
dh_link -pminc-tools \
		/usr/share/man/man1/voxeltoworld.1 \
		/usr/share/man/man1/worldtovoxel.1
# libminc2-1
dh_install -plibminc2-1 --autodest debian/tmp/usr/lib/*/lib*.so.*
# libminc-dev
dh_install -plibminc-dev --autodest debian/tmp/usr/lib/*/lib*.so
dh_install -plibminc-dev --autodest  debian/tmp/usr/lib/*/lib*.a
dh_install -plibminc-dev --autodest  debian/tmp/usr/include
dh_installdocs -plibminc-dev doc/prog_ref.ps doc/prog_guide.ps volume_io/Documentation/volume_io.ps debian/index.html
make[1]: Leaving directory `/«PKGBUILDDIR»'
   dh_installdocs -a -O--parallel
   dh_installchangelogs -a -O--parallel
   dh_installexamples -a -O--parallel
   dh_installman -a -O--parallel
   dh_installcatalogs -a -O--parallel
   dh_installcron -a -O--parallel
   dh_installdebconf -a -O--parallel
   dh_installemacsen -a -O--parallel
   dh_installifupdown -a -O--parallel
   dh_installinfo -a -O--parallel
   dh_installinit -a -O--parallel
   dh_installmenu -a -O--parallel
   dh_installmime -a -O--parallel
   dh_installmodules -a -O--parallel
   dh_installlogcheck -a -O--parallel
   dh_installlogrotate -a -O--parallel
   dh_installpam -a -O--parallel
   dh_installppp -a -O--parallel
   dh_installudev -a -O--parallel
   dh_installwm -a -O--parallel
   dh_installxfonts -a -O--parallel
   dh_installgsettings -a -O--parallel
   dh_bugfiles -a -O--parallel
   dh_ucf -a -O--parallel
   dh_lintian -a -O--parallel
   dh_gconf -a -O--parallel
   dh_icons -a -O--parallel
   dh_perl -a -O--parallel
   dh_usrlocal -a -O--parallel
   dh_link -a -O--parallel
   dh_compress -a -O--parallel
   dh_fixperms -a -O--parallel
   dh_strip -a -O--parallel
   dh_makeshlibs -a -O--parallel
   dh_shlibdeps -a -O--parallel
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/minc-tools/usr/bin/mincstats debian/minc-tools/usr/bin/nii2mnc debian/minc-tools/usr/bin/invert_raw_image debian/minc-tools/usr/bin/mincmakescalar debian/minc-tools/usr/bin/mincexpand debian/minc-tools/usr/bin/dump_acr_nema debian/minc-tools/usr/bin/upet2mnc debian/minc-tools/usr/bin/minccopy debian/minc-tools/usr/bin/xfminvert debian/minc-tools/usr/bin/read_acr_nema debian/minc-tools/usr/bin/mincconvert debian/minc-tools/usr/bin/minctoraw debian/minc-tools/usr/bin/xfm2def debian/minc-tools/usr/bin/mincreshape debian/minc-tools/usr/bin/mincresample debian/minc-tools/usr/bin/minccmp debian/minc-tools/usr/bin/minccalc debian/minc-tools/usr/bin/mincinfo debian/minc-tools/usr/bin/copy_acr_nema debian/minc-tools/usr/bin/vff2mnc debian/minc-tools/usr/bin/mincdump debian/minc-tools/usr/bin/mincmakevector debian/minc-tools/usr/bin/minctoecat debian/minc-tools/usr/bin/mincconcat debian/minc-tools/usr/bin/mincaverage debian/minc-tools/usr/bin/minc_modify_header debian/minc-tools/usr/bin/ecattominc debian/minc-tools/usr/bin/mincextract debian/minc-tools/usr/bin/voxeltoworld debian/minc-tools/usr/bin/mnc2nii debian/minc-tools/usr/bin/mincwindow debian/minc-tools/usr/bin/worldtovoxel debian/minc-tools/usr/bin/dcm2mnc debian/minc-tools/usr/bin/mincmath debian/minc-tools/usr/bin/mincgen debian/minc-tools/usr/bin/xfmconcat debian/minc-tools/usr/bin/rawtominc debian/minc-tools/usr/bin/transformtags debian/minc-tools/usr/bin/extract_acr_nema debian/minc-tools/usr/bin/minclookup were not linked against libz.so.1 (they use none of the library's symbols).
dpkg-shlibdeps: warning: symbol miicv_setdbl used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries.
dpkg-shlibdeps: warning: symbol miattputstr used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries.
dpkg-shlibdeps: warning: symbol miicv_detach used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries.
dpkg-shlibdeps: warning: symbol micopy_all_var_defs used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries.
dpkg-shlibdeps: warning: symbol miget_valid_range used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries.
dpkg-shlibdeps: warning: symbol miicv_put used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries.
dpkg-shlibdeps: warning: symbol miopen used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries.
dpkg-shlibdeps: warning: symbol MI2attput used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries.
dpkg-shlibdeps: warning: symbol MI2diminq used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries.
dpkg-shlibdeps: warning: symbol miicv_create used by debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 found in none of the libraries.
dpkg-shlibdeps: warning: 26 other similar warnings have been skipped (use -v to see them all).
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libacr_nema.so.0.0.0 debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2 debian/libminc2-1/usr/lib/arm-linux-gnueabihf/libminc2.so.1.1.3 were not linked against libz.so.1 (they use none of the library's symbols).
   dh_installdeb -a -O--parallel
   dh_gencontrol -a -O--parallel
dpkg-gencontrol: warning: package minc-tools: unused substitution variable ${perl:Depends}
   dh_md5sums -a -O--parallel
   dh_builddeb -a -O--parallel
dpkg-deb: building package `minc-tools' in `../minc-tools_2.1.10-1_armhf.deb'.
dpkg-deb: building package `libminc2-1:armhf' in `../libminc2-1_2.1.10-1_armhf.deb'.
dpkg-deb: building package `libminc-dev' in `../libminc-dev_2.1.10-1_armhf.deb'.
 dpkg-genchanges -B -mbuildd >../minc_2.1.10-1_armhf.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
 dpkg-source --after-build minc-2.1.10
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20120521-2203

Finished
────────

I: Built successfully

┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘


minc_2.1.10-1_armhf.changes:
────────────────────────────

Format: 1.8
Date: Sun, 26 Feb 2012 01:37:47 -0600
Source: minc
Binary: minc-tools libminc2-1 libminc-dev
Architecture: armhf
Version: 2.1.10-1
Distribution: testing
Urgency: low
Maintainer: buildd
Changed-By: Steve M. Robbins <smr@debian.org>
Description: 
 libminc-dev - MNI medical image format development environment
 libminc2-1 - MNI medical image format library
 minc-tools - MNI medical image format tools
Changes: 
 minc (2.1.10-1) unstable; urgency=low
 .
   * New upstream.
 .
   * patches/03_mincview.diff: Remove.  Script mincview rewritten to use
     Imagemagick
 .
   * patches/decompress-whole-file.diff:
   * patches/read_file_names-refactor.patch: Remove.  Applied upstream.
   * rules: Remove use of dh_autoreconf.
 .
   * patches/hdfv2-fixes.patch: New.  Ensure using HDF5 v2 API.
 .
   * control: Remove dependency and build-dependency on csh.
Checksums-Sha1: 
 b3a360533cc991e107ea9560759c3f8b2c53b967 506678 minc-tools_2.1.10-1_armhf.deb
 3f025fdb6631f0f7aade956922e8b6715ad4e8c5 236418 libminc2-1_2.1.10-1_armhf.deb
 3d5e8b9d4ab4fea09f47fbebef194a87c1bb4c18 846202 libminc-dev_2.1.10-1_armhf.deb
Checksums-Sha256: 
 5d7235c656b9d205c070c8675a9b2589256f85209af34a06516e0c41bf19a77c 506678 minc-tools_2.1.10-1_armhf.deb
 90ea42b01601aa0743b378b42cb3bbf2a98871e6923ad762fb6de5ed664da5cb 236418 libminc2-1_2.1.10-1_armhf.deb
 056f70c6b515469660b82c9e55b57bf128408abb14cf4519c5f002d35138588a 846202 libminc-dev_2.1.10-1_armhf.deb
Files: 
 3badcbd2d6274ef171e8937723fdbba9 506678 science optional minc-tools_2.1.10-1_armhf.deb
 9b453968710c5cfdc221802aee25d15f 236418 libs optional libminc2-1_2.1.10-1_armhf.deb
 a6ef0fcd425019d5346e7badf8a2db23 846202 libdevel optional libminc-dev_2.1.10-1_armhf.deb

┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents                                                             │
└──────────────────────────────────────────────────────────────────────────────┘


minc-tools_2.1.10-1_armhf.deb
─────────────────────────────

 new debian package, version 2.0.
 size 506678 bytes: control archive= 3386 bytes.
    1100 bytes,    22 lines      control              
    5721 bytes,    94 lines      md5sums              
 Package: minc-tools
 Source: minc
 Version: 2.1.10-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 1088
 Depends: libc6 (>= 2.13-28), libhdf5-7, libminc2-1, libnetcdfc7, zlib1g (>= 1:1.1.4), netcdf-bin, libgetopt-tabular-perl, libtext-format-perl, imagemagick
 Section: science
 Priority: optional
 Homepage: http://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage
 Description: MNI medical image format tools
  This package contains tools to manipulate MINC files.
  .
  The Minc file format is a highly flexible medical image file format
  built on top of the NetCDF generalized data format. The format is
  simple, self-describing, extensible, portable and N-dimensional, with
  programming interfaces for both low-level data access and high-level
  volume manipulation. On top of the libraries is a suite of generic
  image-file manipulation tools. The format, libraries and tools are
  designed for use in a medical-imaging research environment: they are
  simple and powerful and make no attempt to provide a pretty interface
  to users.

drwxr-xr-x root/root         0 2012-05-21 22:01 ./
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/share/
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/share/man/
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/share/man/man3/
-rw-r--r-- root/root      5934 2012-05-21 22:01 ./usr/share/man/man3/ParseArgv.3.gz
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/share/man/man1/
-rw-r--r-- root/root      1429 2012-05-21 22:01 ./usr/share/man/man1/mincmakevector.1.gz
-rw-r--r-- root/root       571 2012-05-21 22:01 ./usr/share/man/man1/transformtags.1.gz
-rw-r--r-- root/root       601 2012-05-21 22:01 ./usr/share/man/man1/mincwindow.1.gz
-rw-r--r-- root/root       408 2012-05-21 22:01 ./usr/share/man/man1/xfminvert.1.gz
-rw-r--r-- root/root      1045 2012-05-21 22:01 ./usr/share/man/man1/ecattominc.1.gz
-rw-r--r-- root/root      2223 2012-05-21 22:01 ./usr/share/man/man1/mincconcat.1.gz
-rw-r--r-- root/root       973 2012-05-21 22:01 ./usr/share/man/man1/mincconvert.1.gz
-rw-r--r-- root/root       567 2012-05-21 22:01 ./usr/share/man/man1/xfmflip.1.gz
-rw-r--r-- root/root       818 2012-05-21 22:01 ./usr/share/man/man1/upet2mnc.1.gz
-rw-r--r-- root/root       487 2012-05-21 22:01 ./usr/share/man/man1/mincedit.1.gz
-rw-r--r-- root/root      2215 2012-05-21 22:01 ./usr/share/man/man1/mincaverage.1.gz
-rw-r--r-- root/root       716 2012-05-21 22:01 ./usr/share/man/man1/mincheader.1.gz
-rw-r--r-- root/root      1204 2012-05-21 22:01 ./usr/share/man/man1/mincpik.1.gz
-rw-r--r-- root/root      3868 2012-05-21 22:01 ./usr/share/man/man1/mincstats.1.gz
-rw-r--r-- root/root       678 2012-05-21 22:01 ./usr/share/man/man1/vff2mnc.1.gz
-rw-r--r-- root/root      1033 2012-05-21 22:01 ./usr/share/man/man1/mincextract.1.gz
-rw-r--r-- root/root       468 2012-05-21 22:01 ./usr/share/man/man1/xfmconcat.1.gz
-rw-r--r-- root/root       617 2012-05-21 22:01 ./usr/share/man/man1/minctoraw.1.gz
-rw-r--r-- root/root       637 2012-05-21 22:01 ./usr/share/man/man1/minccopy.1.gz
-rw-r--r-- root/root      1253 2012-05-21 22:01 ./usr/share/man/man1/mnc2nii.1.gz
-rw-r--r-- root/root       364 2012-05-21 22:01 ./usr/share/man/man1/invert_raw_image.1.gz
-rw-r--r-- root/root      1671 2012-05-21 22:01 ./usr/share/man/man1/mincinfo.1.gz
-rw-r--r-- root/root      4501 2012-05-21 22:01 ./usr/share/man/man1/mincresample.1.gz
-rw-r--r-- root/root      1416 2012-05-21 22:01 ./usr/share/man/man1/minctoecat.1.gz
-rw-r--r-- root/root      3022 2012-05-21 22:01 ./usr/share/man/man1/mincmath.1.gz
-rw-r--r-- root/root      4644 2012-05-21 22:01 ./usr/share/man/man1/mincreshape.1.gz
-rw-r--r-- root/root      2566 2012-05-21 22:01 ./usr/share/man/man1/minccomplete.1.gz
-rw-r--r-- root/root      4766 2012-05-21 22:01 ./usr/share/man/man1/minccalc.1.gz
-rw-r--r-- root/root      1272 2012-05-21 22:01 ./usr/share/man/man1/nii2mnc.1.gz
-rw-r--r-- root/root      1630 2012-05-21 22:01 ./usr/share/man/man1/minc_modify_header.1.gz
-rw-r--r-- root/root       497 2012-05-21 22:01 ./usr/share/man/man1/voxeltoworld.1.gz
-rw-r--r-- root/root      1935 2012-05-21 22:01 ./usr/share/man/man1/mincmakescalar.1.gz
-rw-r--r-- root/root      4704 2012-05-21 22:01 ./usr/share/man/man1/mincgen.1.gz
-rw-r--r-- root/root      4570 2012-05-21 22:01 ./usr/share/man/man1/rawtominc.1.gz
-rw-r--r-- root/root      2467 2012-05-21 22:01 ./usr/share/man/man1/minchistory.1.gz
-rw-r--r-- root/root       957 2012-05-21 22:01 ./usr/share/man/man1/mincexpand.1.gz
-rw-r--r-- root/root      3213 2012-05-21 22:01 ./usr/share/man/man1/minclookup.1.gz
-rw-r--r-- root/root      3675 2012-05-21 22:01 ./usr/share/man/man1/dcm2mnc.1.gz
-rw-r--r-- root/root       589 2012-05-21 22:01 ./usr/share/man/man1/mincdiff.1.gz
-rw-r--r-- root/root       880 2012-05-21 22:01 ./usr/share/man/man1/xfm2def.1.gz
-rw-r--r-- root/root      1605 2012-05-21 22:01 ./usr/share/man/man1/minccmp.1.gz
-rw-r--r-- root/root       475 2012-05-21 22:01 ./usr/share/man/man1/mincview.1.gz
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/share/doc/
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/share/doc/minc-tools/
-rw-r--r-- root/root      3552 2012-02-25 23:44 ./usr/share/doc/minc-tools/changelog.Debian.gz
-rw-r--r-- root/root       848 2008-06-17 21:03 ./usr/share/doc/minc-tools/copyright
-rw-r--r-- root/root     11740 2012-02-21 07:08 ./usr/share/doc/minc-tools/changelog.gz
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/bin/
-rwxr-xr-x root/root      5648 2012-05-21 22:01 ./usr/bin/mincexpand
-rwxr-xr-x root/root      5672 2012-05-21 22:01 ./usr/bin/transformtags
-rwxr-xr-x root/root     22320 2012-05-21 22:01 ./usr/bin/mincdump
-rwxr-xr-x root/root      5672 2012-05-21 22:01 ./usr/bin/xfminvert
-rwxr-xr-x root/root      4985 2012-05-21 22:01 ./usr/bin/mincedit
-rwxr-xr-x root/root     20596 2012-05-21 22:01 ./usr/bin/upet2mnc
-rwxr-xr-x root/root      5612 2012-05-21 22:01 ./usr/bin/voxeltoworld
-rwxr-xr-x root/root     59084 2012-05-21 22:01 ./usr/bin/mincgen
-rwxr-xr-x root/root      5708 2012-05-21 22:01 ./usr/bin/mincwindow
-rwxr-xr-x root/root     22720 2012-05-21 22:01 ./usr/bin/mincextract
-rwxr-xr-x root/root      5680 2012-05-21 22:01 ./usr/bin/xfmconcat
-rwxr-xr-x root/root      3112 2012-05-21 22:01 ./usr/bin/mincdiff
-rwxr-xr-x root/root     34548 2012-05-21 22:01 ./usr/bin/ecattominc
-rwxr-xr-x root/root     15592 2012-05-21 22:01 ./usr/bin/mincmath
-rwxr-xr-x root/root     10000 2012-05-21 22:01 ./usr/bin/minctoraw
-rwxr-xr-x root/root     39832 2012-05-21 22:01 ./usr/bin/mincreshape
-rwxr-xr-x root/root      9724 2012-05-21 22:01 ./usr/bin/dump_acr_nema
-rwxr-xr-x root/root     81400 2012-05-21 22:01 ./usr/bin/dcm2mnc
-rwxr-xr-x root/root     30560 2012-05-21 22:01 ./usr/bin/minctoecat
-rwxr-xr-x root/root      9708 2012-05-21 22:01 ./usr/bin/copy_acr_nema
-rwxr-xr-x root/root      9776 2012-05-21 22:01 ./usr/bin/minccopy
-rwxr-xr-x root/root      5644 2012-05-21 22:01 ./usr/bin/read_acr_nema
-rwxr-xr-x root/root     10192 2012-05-21 22:01 ./usr/bin/mincmakescalar
-rwxr-xr-x root/root     48632 2012-05-21 22:01 ./usr/bin/mincresample
-rwxr-xr-x root/root      3107 2012-05-21 22:01 ./usr/bin/mincheader
-rwxr-xr-x root/root     27448 2012-05-21 22:01 ./usr/bin/mincstats
-rwxr-xr-x root/root     18696 2012-05-21 22:01 ./usr/bin/mincaverage
-rwxr-xr-x root/root      9704 2012-05-21 22:01 ./usr/bin/extract_acr_nema
-rwxr-xr-x root/root      9888 2012-05-21 22:01 ./usr/bin/minc_modify_header
-rwxr-xr-x root/root      5588 2012-05-21 22:01 ./usr/bin/invert_raw_image
-rwxr-xr-x root/root     28248 2012-05-21 22:01 ./usr/bin/rawtominc
-rwxr-xr-x root/root      4536 2012-05-21 22:01 ./usr/bin/minccomplete
-rwxr-xr-x root/root     22220 2012-05-21 22:01 ./usr/bin/vff2mnc
-rwxr-xr-x root/root     14216 2012-05-21 22:01 ./usr/bin/minccmp
-rwxr-xr-x root/root     15472 2012-05-21 22:01 ./usr/bin/minclookup
-rwxr-xr-x root/root      4005 2012-05-21 22:01 ./usr/bin/minchistory
-rwxr-xr-x root/root     10072 2012-05-21 22:01 ./usr/bin/mincmakevector
-rwxr-xr-x root/root     17058 2012-05-21 22:01 ./usr/bin/mincpik
-rwxr-xr-x root/root     22920 2012-05-21 22:01 ./usr/bin/mincconcat
-rwxr-xr-x root/root     10368 2012-05-21 22:01 ./usr/bin/xfm2def
-rwxr-xr-x root/root      3289 2012-05-21 22:01 ./usr/bin/mincview
-rwxr-xr-x root/root     14920 2012-05-21 22:01 ./usr/bin/mincinfo
-rwxr-xr-x root/root    100432 2012-05-21 22:01 ./usr/bin/nii2mnc
-rwxr-xr-x root/root      5736 2012-05-21 22:01 ./usr/bin/mincconvert
-rwxr-xr-x root/root    100380 2012-05-21 22:01 ./usr/bin/mnc2nii
-rwxr-xr-x root/root      5608 2012-05-21 22:01 ./usr/bin/worldtovoxel
-rwxr-xr-x root/root      3604 2012-05-21 22:01 ./usr/bin/xfmflip
-rwxr-xr-x root/root     47804 2012-05-21 22:01 ./usr/bin/minccalc
lrwxrwxrwx root/root         0 2012-05-21 22:01 ./usr/share/man/man1/worldtovoxel.1.gz -> voxeltoworld.1.gz


libminc2-1_2.1.10-1_armhf.deb
─────────────────────────────

 new debian package, version 2.0.
 size 236418 bytes: control archive= 1262 bytes.
    1223 bytes,    26 lines      control              
     468 bytes,     6 lines      md5sums              
     135 bytes,     7 lines   *  postinst             #!/bin/sh
     132 bytes,     7 lines   *  postrm               #!/bin/sh
      74 bytes,     3 lines      shlibs               
 Package: libminc2-1
 Source: minc
 Version: 2.1.10-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 490
 Pre-Depends: multiarch-support
 Depends: libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libhdf5-7, libnetcdfc7, zlib1g (>= 1:1.1.4)
 Section: libs
 Priority: optional
 Multi-Arch: same
 Homepage: http://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage
 Description: MNI medical image format library
  This package contains the libraries libminc2 and libvolume_io2.
  .
  The Minc file format is a highly flexible medical image file format.
  Minc version 1 is built on top of the NetCDF generalized data format.
  Minc version 2 is built on top of the HDF data format.  This library
  handles both formats.  In each case the format is
  simple, self-describing, extensible, portable and N-dimensional, with
  programming interfaces for both low-level data access and high-level
  volume manipulation. On top of the libraries is a suite of generic
  image-file manipulation tools. The format, libraries and tools are
  designed for use in a medical-imaging research environment : they are
  simple and powerful and make no attempt to provide a pretty interface
  to users.

drwxr-xr-x root/root         0 2012-05-21 22:01 ./
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/share/
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/share/doc/
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/share/doc/libminc2-1/
-rw-r--r-- root/root      3552 2012-02-25 23:44 ./usr/share/doc/libminc2-1/changelog.Debian.gz
-rw-r--r-- root/root       848 2008-06-17 21:03 ./usr/share/doc/libminc2-1/copyright
-rw-r--r-- root/root     11740 2012-02-21 07:08 ./usr/share/doc/libminc2-1/changelog.gz
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/lib/
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root    204092 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1.1.2
-rw-r--r-- root/root     60580 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libacr_nema.so.0.0.0
-rw-r--r-- root/root    187528 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libminc2.so.1.1.3
lrwxrwxrwx root/root         0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libacr_nema.so.0 -> libacr_nema.so.0.0.0
lrwxrwxrwx root/root         0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libvolume_io2.so.1 -> libvolume_io2.so.1.1.2
lrwxrwxrwx root/root         0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libminc2.so.1 -> libminc2.so.1.1.3


libminc-dev_2.1.10-1_armhf.deb
──────────────────────────────

 new debian package, version 2.0.
 size 846202 bytes: control archive= 2198 bytes.
    1225 bytes,    27 lines      control              
    3021 bytes,    45 lines      md5sums              
 Package: libminc-dev
 Source: minc
 Version: 2.1.10-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 1455
 Depends: libminc2-1 (= 2.1.10-1), libnetcdf-dev, libhdf5-dev
 Conflicts: libminc0-dev
 Replaces: libminc0-dev
 Section: libdevel
 Priority: optional
 Homepage: http://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage
 Description: MNI medical image format development environment
  This package contains the library and headers for libminc2 and
  libvolume_io2.
  .
  The Minc file format is a highly flexible medical image file format.
  Minc version 1 is built on top of the NetCDF generalized data format.
  Minc version 2 is built on top of the HDF data format.  This library
  handles both formats.  In each case the format is
  simple, self-describing, extensible, portable and N-dimensional, with
  programming interfaces for both low-level data access and high-level
  volume manipulation. On top of the libraries is a suite of generic
  image-file manipulation tools. The format, libraries and tools are
  designed for use in a medical-imaging research environment : they are
  simple and powerful and make no attempt to provide a pretty interface
  to users.

drwxr-xr-x root/root         0 2012-05-21 22:01 ./
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/include/
-rw-r--r-- root/root      2150 2012-05-21 22:01 ./usr/include/volume_io.h
-rw-r--r-- root/root      2972 2012-05-21 22:01 ./usr/include/minc_compat.h
-rw-r--r-- root/root      2692 2012-05-21 22:01 ./usr/include/ParseArgv.h
-rw-r--r-- root/root     24435 2012-05-21 22:01 ./usr/include/minc.h
-rw-r--r-- root/root      2148 2012-05-21 22:01 ./usr/include/time_stamp.h
-rw-r--r-- root/root     23057 2012-05-21 22:01 ./usr/include/minc2.h
-rw-r--r-- root/root      3194 2012-05-21 22:01 ./usr/include/minc_simple.h
-rw-r--r-- root/root      2942 2012-05-21 22:01 ./usr/include/nd_loop.h
-rw-r--r-- root/root      3236 2012-05-21 22:01 ./usr/include/acr_nema.h
-rw-r--r-- root/root     15000 2012-05-21 22:01 ./usr/include/voxel_loop.h
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/include/volume_io/
-rw-r--r-- root/root      1789 2012-05-21 22:01 ./usr/include/volume_io/string_funcs.h
-rw-r--r-- root/root      1095 2012-05-21 22:01 ./usr/include/volume_io/internal_volume_io.h
-rw-r--r-- root/root      6749 2012-05-21 22:01 ./usr/include/volume_io/arrays.h
-rw-r--r-- root/root     17759 2012-05-21 22:01 ./usr/include/volume_io/volume.h
-rw-r--r-- root/root      8965 2012-05-21 22:01 ./usr/include/volume_io/geometry.h
-rw-r--r-- root/root      2029 2012-05-21 22:01 ./usr/include/volume_io/progress.h
-rw-r--r-- root/root      1318 2012-05-21 22:01 ./usr/include/volume_io/system_dependent.h
-rw-r--r-- root/root      5945 2012-05-21 22:01 ./usr/include/volume_io/basic.h
-rw-r--r-- root/root       999 2012-05-21 22:01 ./usr/include/volume_io/def_math.h
-rw-r--r-- root/root      3379 2012-05-21 22:01 ./usr/include/volume_io/transforms.h
-rw-r--r-- root/root     11612 2012-05-21 22:01 ./usr/include/volume_io/multidim.h
-rw-r--r-- root/root      9236 2012-05-21 22:01 ./usr/include/volume_io/geom_structs.h
-rw-r--r-- root/root      4083 2012-05-21 22:01 ./usr/include/volume_io/volume_cache.h
-rw-r--r-- root/root     10970 2012-05-21 22:01 ./usr/include/volume_io/alloc.h
-rw-r--r-- root/root      1728 2012-05-21 22:01 ./usr/include/volume_io/files.h
-rw-r--r-- root/root     52830 2012-05-21 22:01 ./usr/include/volume_io/vol_io_prototypes.h
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/include/acr_nema/
-rw-r--r-- root/root      3854 2012-05-21 22:01 ./usr/include/acr_nema/dicom_client_routines.h
-rw-r--r-- root/root      6968 2012-05-21 22:01 ./usr/include/acr_nema/group.h
-rw-r--r-- root/root      7862 2012-05-21 22:01 ./usr/include/acr_nema/acr_io.h
-rw-r--r-- root/root      2756 2012-05-21 22:01 ./usr/include/acr_nema/value_repr.h
-rw-r--r-- root/root      5459 2012-05-21 22:01 ./usr/include/acr_nema/file_io.h
-rw-r--r-- root/root      9498 2012-05-21 22:01 ./usr/include/acr_nema/element.h
-rw-r--r-- root/root      3083 2012-05-21 22:01 ./usr/include/acr_nema/message.h
-rw-r--r-- root/root      6177 2012-05-21 22:01 ./usr/include/acr_nema/dicom_network.h
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/share/
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/share/doc-base/
-rw-r--r-- root/root       652 2008-03-30 21:08 ./usr/share/doc-base/minc
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/share/doc/
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/share/doc/libminc-dev/
-rw-r--r-- root/root    163928 2012-05-21 22:01 ./usr/share/doc/libminc-dev/prog_guide.ps.gz
-rw-r--r-- root/root      3552 2012-02-25 23:44 ./usr/share/doc/libminc-dev/changelog.Debian.gz
-rw-r--r-- root/root       848 2008-06-17 21:03 ./usr/share/doc/libminc-dev/copyright
-rw-r--r-- root/root     11740 2012-02-21 07:08 ./usr/share/doc/libminc-dev/changelog.gz
-rw-r--r-- root/root    146211 2012-05-21 22:01 ./usr/share/doc/libminc-dev/prog_ref.ps.gz
-rw-r--r-- root/root      1017 2007-12-28 23:34 ./usr/share/doc/libminc-dev/index.html
-rw-r--r-- root/root    224971 2012-05-21 22:01 ./usr/share/doc/libminc-dev/volume_io.ps.gz
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/lib/
drwxr-xr-x root/root         0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root    284868 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libvolume_io2.a
-rw-r--r-- root/root    249458 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libminc2.a
-rw-r--r-- root/root     85390 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libacr_nema.a
lrwxrwxrwx root/root         0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libminc2.so -> libminc2.so.1.1.3
lrwxrwxrwx root/root         0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libacr_nema.so -> libacr_nema.so.0.0.0
lrwxrwxrwx root/root         0 2012-05-21 22:01 ./usr/lib/arm-linux-gnueabihf/libvolume_io2.so -> libvolume_io2.so.1.1.2


┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build                                                                   │
└──────────────────────────────────────────────────────────────────────────────┘


┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘

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  ed* file* fontconfig-config* gettext* gettext-base* groff-base*
  hdf5-helpers* html2text* intltool-debian* libcf0* libcroco3*
  libcurl3-gnutls* libexpat1* libffi5* libfontconfig1* libfreetype6*
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  libjpeg8* libjpeg8-dev* libk5crypto3* libkeyutils1* libkpathsea6* libkrb5-3*
  libkrb5support0* liblcms1* libldap-2.4-2* libmagic1* libnetcdf-dev*
  libnetcdfc++4* libnetcdfc7* libnetcdff5* libopenjpeg2* libp11-kit0*
  libpaper-utils* libpaper1* libpcre3* libpipeline1* libpng12-0* libpoppler13*
  libptexenc1* librtmp0* libsasl2-2* libsm6* libssh2-1* libtasn1-3* libtool*
  libunistring0* libx11-6* libx11-data* libxau6* libxaw7* libxcb1* libxdmcp6*
  libxext6* libxml2* libxmu6* libxpm4* libxt6* luatex* m4* man-db*
  mime-support* po-debconf* sbuild-build-depends-core-dummy*
  sbuild-build-depends-minc-dummy* tex-common* texlive-base* texlive-binaries*
  texlive-common* texlive-doc-base* texlive-latex-base* ttf-dejavu-core*
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘

Architecture: armhf
Build-Space: 115888
Build-Time: 1097
Distribution: testing
Install-Time: 222
Job: minc_2.1.10-1
Package: minc
Package-Time: 1339
Source-Version: 2.1.10-1
Space: 115888
Status: successful
Version: 2.1.10-1
────────────────────────────────────────────────────────────────────────────────
Finished at 20120521-2203
Build needed 00:22:19, 115888k disc space