sbuild (Debian sbuild) 0.62.6 (07 Dec 2011) on build00.raspbian.lan ╔══════════════════════════════════════════════════════════════════════════════╗ ║ profphd-utils 1.0.9-1 (armhf) 12 Jun 2012 03:07 ║ ╚══════════════════════════════════════════════════════════════════════════════╝ Package: profphd-utils Version: 1.0.9-1 Source Version: 1.0.9-1 Distribution: testing Architecture: armhf I: NOTICE: Log filtering will replace 'build/profphd-utils-uFzFrV/profphd-utils-1.0.9' with '«PKGBUILDDIR»' I: NOTICE: Log filtering will replace 'build/profphd-utils-uFzFrV' with '«BUILDDIR»' I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/testing-armhf-sbuild-fe8fb4bd-9bdc-44ce-ae39-d9b30b70c27a' with '«CHROOT»' ┌──────────────────────────────────────────────────────────────────────────────┐ │ Update chroot │ └──────────────────────────────────────────────────────────────────────────────┘ Hit http://repo.raspbian.lan testing InRelease Hit http://repo.raspbian.lan testing/main Sources Hit http://repo.raspbian.lan testing/main armhf Packages Ign http://repo.raspbian.lan testing/main Translation-en Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Fetch source files │ └──────────────────────────────────────────────────────────────────────────────┘ Check APT ───────── Checking available source versions... Download source files with APT ────────────────────────────── Reading package lists... Building dependency tree... Reading state information... NOTICE: 'profphd-utils' packaging is maintained in the 'Svn' version control system at: svn://svn.debian.org/debian-med/trunk/packages/rostlab/profphd-utils/trunk/ Need to get 393 kB of source archives. Get:1 http://repo.raspbian.lan/raspbian/ testing/main profphd-utils 1.0.9-1 (dsc) [2039 B] Get:2 http://repo.raspbian.lan/raspbian/ testing/main profphd-utils 1.0.9-1 (tar) [388 kB] Get:3 http://repo.raspbian.lan/raspbian/ testing/main profphd-utils 1.0.9-1 (diff) [2626 B] Fetched 393 kB in 0s (2594 kB/s) Download complete and in download only mode Check arch ────────── Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-CtI6eB/apt_archive/sbuild-build-depends-core-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install core build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy debconf: delaying package configuration, since apt-utils is not installed 0 upgraded, 1 newly installed, 0 to remove and 6 not upgraded. Need to get 0 B/704 B of archives. After this operation, 0 B of additional disk space will be used. Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 10657 files and directories currently installed.) Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 7.0.50~), gfortran Filtered Build-Depends: libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 7.0.50~), gfortran dpkg-deb: building package `sbuild-build-depends-profphd-utils-dummy' in `/«BUILDDIR»/resolver-J4UkgD/apt_archive/sbuild-build-depends-profphd-utils-dummy.deb'. OK Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install profphd-utils build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bsdmainutils debhelper file gettext gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libgfortran3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf Suggested packages: wamerican wordlist whois vacation dh-make gettext-doc gfortran-doc gfortran-4.6-doc libgfortran3-dbg groff less www-browser libmail-box-perl Recommended packages: curl wget lynx-cur autopoint libglib2.0-data shared-mime-info xml-core libmail-sendmail-perl The following NEW packages will be installed: bsdmainutils debhelper file gettext gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian libasprintf0c2 libcroco3 libffi5 libgettextpo0 libgfortran3 libglib2.0-0 libmagic1 libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf sbuild-build-depends-profphd-utils-dummy 0 upgraded, 24 newly installed, 0 to remove and 6 not upgraded. Need to get 4833 kB/14.5 MB of archives. After this operation, 37.0 MB of additional disk space will be used. Get:1 http://repo.raspbian.lan/raspbian/ testing/main gfortran-4.6 armhf 4.6.3-1.1+rpi2 [4832 kB] Get:2 http://repo.raspbian.lan/raspbian/ testing/main gfortran armhf 4:4.6.2-4 [1124 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 4833 kB in 2s (1752 kB/s) Selecting previously unselected package libpcre3:armhf. (Reading database ... 10657 files and directories currently installed.) Unpacking libpcre3:armhf (from .../libpcre3_1%3a8.30-5_armhf.deb) ... Selecting previously unselected package libpipeline1:armhf. Unpacking libpipeline1:armhf (from .../libpipeline1_1.2.1-1_armhf.deb) ... Selecting previously unselected package libasprintf0c2:armhf. Unpacking libasprintf0c2:armhf (from .../libasprintf0c2_0.18.1.1-8_armhf.deb) ... Selecting previously unselected package libmagic1:armhf. Unpacking libmagic1:armhf (from .../libmagic1_5.11-1_armhf.deb) ... Selecting previously unselected package libxml2:armhf. Unpacking libxml2:armhf (from .../libxml2_2.8.0+dfsg1-3_armhf.deb) ... Selecting previously unselected package libffi5:armhf. Unpacking libffi5:armhf (from .../libffi5_3.0.10-3+b3_armhf.deb) ... Selecting previously unselected package libglib2.0-0:armhf. Unpacking libglib2.0-0:armhf (from .../libglib2.0-0_2.32.3-1_armhf.deb) ... Selecting previously unselected package libcroco3:armhf. Unpacking libcroco3:armhf (from .../libcroco3_0.6.5-1_armhf.deb) ... Selecting previously unselected package libunistring0:armhf. Unpacking libunistring0:armhf (from .../libunistring0_0.9.3-5_armhf.deb) ... Selecting previously unselected package libgettextpo0:armhf. Unpacking libgettextpo0:armhf (from .../libgettextpo0_0.18.1.1-8_armhf.deb) ... Selecting previously unselected package libgfortran3:armhf. Unpacking libgfortran3:armhf (from .../libgfortran3_4.7.0-1.1+rpi_armhf.deb) ... Selecting previously unselected package bsdmainutils. Unpacking bsdmainutils (from .../bsdmainutils_9.0.2_armhf.deb) ... Selecting previously unselected package groff-base. Unpacking groff-base (from .../groff-base_1.21-7_armhf.deb) ... Selecting previously unselected package man-db. Unpacking man-db (from .../man-db_2.6.1-2_armhf.deb) ... Selecting previously unselected package file. Unpacking file (from .../archives/file_5.11-1_armhf.deb) ... Selecting previously unselected package gettext-base. Unpacking gettext-base (from .../gettext-base_0.18.1.1-8_armhf.deb) ... Selecting previously unselected package html2text. Unpacking html2text (from .../html2text_1.3.2a-15_armhf.deb) ... Selecting previously unselected package gettext. Unpacking gettext (from .../gettext_0.18.1.1-8_armhf.deb) ... Selecting previously unselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously unselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ... Selecting previously unselected package debhelper. Unpacking debhelper (from .../debhelper_9.20120528_all.deb) ... Selecting previously unselected package gfortran-4.6. Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1.1+rpi2_armhf.deb) ... Selecting previously unselected package gfortran. Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_armhf.deb) ... Selecting previously unselected package sbuild-build-depends-profphd-utils-dummy. Unpacking sbuild-build-depends-profphd-utils-dummy (from .../sbuild-build-depends-profphd-utils-dummy.deb) ... Setting up libpcre3:armhf (1:8.30-5) ... Setting up libpipeline1:armhf (1.2.1-1) ... Setting up libasprintf0c2:armhf (0.18.1.1-8) ... Setting up libmagic1:armhf (5.11-1) ... Setting up libxml2:armhf (2.8.0+dfsg1-3) ... Setting up libffi5:armhf (3.0.10-3+b3) ... Setting up libglib2.0-0:armhf (2.32.3-1) ... No schema files found: doing nothing. Setting up libcroco3:armhf (0.6.5-1) ... Setting up libunistring0:armhf (0.9.3-5) ... Setting up libgettextpo0:armhf (0.18.1.1-8) ... Setting up libgfortran3:armhf (4.7.0-1.1+rpi) ... Setting up bsdmainutils (9.0.2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up groff-base (1.21-7) ... Setting up man-db (2.6.1-2) ... Building database of manual pages ... Setting up file (5.11-1) ... Setting up gettext-base (0.18.1.1-8) ... Setting up html2text (1.3.2a-15) ... Setting up gettext (0.18.1.1-8) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2) ... Setting up debhelper (9.20120528) ... Setting up gfortran-4.6 (4.6.3-1.1+rpi2) ... Setting up gfortran (4:4.6.2-4) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode. Setting up sbuild-build-depends-profphd-utils-dummy (0.invalid.0) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build environment │ └──────────────────────────────────────────────────────────────────────────────┘ Kernel: Linux 3.2.12-mx5 armhf (armv7l) Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.3 g++-4.6_4.6.3-1.1+rpi2 gcc-4.6_4.6.3-1.1+rpi2 libc6-dev_2.13-33 libstdc++6_4.7.0-1.1+rpi libstdc++6-4.6-dev_4.6.3-1.1+rpi2 linux-libc-dev_3.2.17-1 Package versions: apt_0.9.3+rpi1 base-files_6.9 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.2 bsdutils_1:2.20.1-5 build-essential_11.5+b1 bzip2_1.0.6-1 coreutils_8.13-3.2 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1.1+rpi2 dash_0.5.7-3 debconf_1.5.43 debfoster_2.7-1.1 debhelper_9.20120528 debian-archive-keyring_2012.3 debianutils_4.3 diffutils_1:3.2-6 dpkg_1.16.3 dpkg-dev_1.16.3 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.3-1 file_5.11-1 findutils_4.4.2-4 g++_4:4.6.2-4 g++-4.6_4.6.3-1.1+rpi2 gcc_4:4.6.2-4 gcc-4.4-base_4.4.7-1.1+rpi1 gcc-4.5-base_4.5.3-12+rpi1 gcc-4.6_4.6.3-1.1+rpi2 gcc-4.6-base_4.6.3-1.1+rpi2 gcc-4.7-base_4.7.0-1.1+rpi gettext_0.18.1.1-8 gettext-base_0.18.1.1-8 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1.1+rpi2 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.12-2 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-7 libapt-pkg4.12_0.9.3+rpi1 libasprintf0c2_0.18.1.1-8 libattr1_1:2.4.46-7 libblkid1_2.20.1-5 libbz2-1.0_1.0.6-1 libc-bin_2.13-33 libc-dev-bin_2.13-33 libc6_2.13-33 libc6-dev_2.13-33 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdb5.1_5.1.29-1 libdpkg-perl_1.16.3 libffi5_3.0.10-3+b3 libfile-fcntllock-perl_0.14-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-1.1+rpi libgdbm3_1.8.3-10 libgettextpo0_0.18.1.1-8 libgfortran3_4.7.0-1.1+rpi libglib2.0-0_2.32.3-1 libgmp10_2:5.0.5+dfsg-1.1 libgomp1_4.7.0-1.1+rpi liblocale-gettext-perl_1.05-7 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-5 libmpc2_0.9-4 libmpfr4_3.1.0-5 libncurses5_5.9-7 libncursesw5_5.9-7 libpam-modules_1.1.3-7.1 libpam-modules-bin_1.1.3-7.1 libpam-runtime_1.1.3-7.1 libpam0g_1.1.3-7.1 libpcre3_1:8.30-5 libpipeline1_1.2.1-1 libreadline6_6.2-8 libselinux1_2.1.9-2 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-3 libslang2_2.2.4-10 libss2_1.42.2-2 libstdc++6_4.7.0-1.1+rpi libstdc++6-4.6-dev_4.6.3-1.1+rpi2 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libtinfo5_5.9-7 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-5 libxml2_2.8.0+dfsg1-3 linux-libc-dev_3.2.17-1 login_1:4.1.5-1 lsb-base_4.1+Debian4 make_3.81-8.2 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-5 multiarch-support_2.13-32 ncurses-base_5.9-7 ncurses-bin_5.9-7 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-11 perl-base_5.14.2-11 perl-modules_5.14.2-11 po-debconf_1.0.16+nmu2 raspbian-archive-keyring_20120528.2 readline-common_6.2-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-profphd-utils-dummy_0.invalid.0 sed_4.2.1-9 sensible-utils_0.0.7 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tzdata_2012c-1 ucf_3.0025+nmu3 util-linux_2.20.1-5 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.7.dfsg-11 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build │ └──────────────────────────────────────────────────────────────────────────────┘ Unpack source ───────────── gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error gpgv: Signature made Fri Jun 1 14:51:33 2012 UTC using RSA key ID 9A0C52FA gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./profphd-utils_1.0.9-1.dsc dpkg-source: info: extracting profphd-utils in profphd-utils-1.0.9 dpkg-source: info: unpacking profphd-utils_1.0.9.orig.tar.gz dpkg-source: info: unpacking profphd-utils_1.0.9-1.debian.tar.gz Check disc space ──────────────── Sufficient free space for build User Environment ──────────────── HOME=/sbuild-nonexistent LOGNAME=buildd PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/X11R6/bin:/usr/games SCHROOT_CHROOT_NAME=testing-armhf-sbuild SCHROOT_COMMAND=env SCHROOT_GID=108 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=testing-armhf-sbuild-fe8fb4bd-9bdc-44ce-ae39-d9b30b70c27a SCHROOT_UID=106 SCHROOT_USER=buildd SHELL=/bin/sh TERM=xterm USER=buildd dpkg-buildpackage ───────────────── dpkg-buildpackage: source package profphd-utils dpkg-buildpackage: source version 1.0.9-1 dpkg-source --before-build profphd-utils-1.0.9 dpkg-buildpackage: host architecture armhf fakeroot debian/rules clean dh clean --parallel dh_testdir -O--parallel dh_auto_clean -O--parallel make -j1 distclean make[1]: Entering directory `/«PKGBUILDDIR»' rm -f *.o convert_seq filter_hssp convert_seq.1 filter_hssp.1 rm -rf\ profphd-utils-1.0.9 \ profphd-utils-1.0.9.tar.gz make[1]: Leaving directory `/«PKGBUILDDIR»' dh_clean -O--parallel rm -f debian/profphd-utils.substvars rm -f debian/profphd-utils.*.debhelper rm -rf debian/profphd-utils/ rm -f debian/*.debhelper.log rm -f debian/files find . \( \( -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} \; \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \) rm -f *-stamp debian/rules build-arch dh build-arch --parallel dh_testdir -a -O--parallel dh_auto_configure -a -O--parallel dh_auto_build -a -O--parallel make -j1 make[1]: Entering directory `/«PKGBUILDDIR»' gfortran -D_FORTIFY_SOURCE=2 -O2 -fbounds-check -Wuninitialized -fbacktrace -g -g -O2 -Wl,-z,relro -o convert_seq convert_seq.f lib-maxhom.f lib-sys-LINUX.f gfortran -D_FORTIFY_SOURCE=2 -O2 -fbounds-check -Wuninitialized -fbacktrace -g -g -O2 -Wl,-z,relro -o filter_hssp filter_hssp.f lib-maxhom.f lib-sys-LINUX.f pod2man -c 'User Commands' -r "1.0.9" -name CONVERT_SEQ "convert_seq.pod" "convert_seq.1" pod2man -c 'User Commands' -r "1.0.9" -name FILTER_HSSP "filter_hssp.pod" "filter_hssp.1" make[1]: Leaving directory `/«PKGBUILDDIR»' dh_auto_test -a -O--parallel fakeroot debian/rules binary-arch dh binary-arch --parallel dh_testroot -a -O--parallel dh_prep -a -O--parallel rm -f debian/profphd-utils.substvars rm -f debian/profphd-utils.*.debhelper rm -rf debian/profphd-utils/ dh_installdirs -a -O--parallel install -d debian/profphd-utils dh_auto_install -a -O--parallel make -j1 install DESTDIR=/«PKGBUILDDIR»/debian/profphd-utils AM_UPDATE_INFO_DIR=no make[1]: Entering directory `/«PKGBUILDDIR»' mkdir -p /«PKGBUILDDIR»/debian/profphd-utils/usr/bin && \ cp convert_seq filter_hssp /«PKGBUILDDIR»/debian/profphd-utils/usr/bin/ mkdir -p /«PKGBUILDDIR»/debian/profphd-utils/usr/share/man/man1 && \ cp convert_seq.1 filter_hssp.1 /«PKGBUILDDIR»/debian/profphd-utils/usr/share/man/man1/ make[1]: Leaving directory `/«PKGBUILDDIR»' dh_install -a -O--parallel dh_installdocs -a -O--parallel install -g 0 -o 0 -d debian/profphd-utils/usr/share/doc/profphd-utils install -g 0 -o 0 -m 644 -p debian/README.Debian debian/profphd-utils/usr/share/doc/profphd-utils/README.Debian install -g 0 -o 0 -m 644 -p debian/copyright debian/profphd-utils/usr/share/doc/profphd-utils/copyright dh_installchangelogs -a -O--parallel install -o 0 -g 0 -p -m644 debian/changelog debian/profphd-utils/usr/share/doc/profphd-utils/changelog.Debian install -o 0 -g 0 -p -m644 ./ChangeLog debian/profphd-utils/usr/share/doc/profphd-utils/changelog dh_installexamples -a -O--parallel dh_installman -a -O--parallel man --recode UTF-8 ./convert_seq\.1 > convert_seq\.1\.new chmod 644 convert_seq.1.new mv -f convert_seq.1.new convert_seq.1 man --recode UTF-8 ./filter_hssp\.1 > filter_hssp\.1\.new chmod 644 filter_hssp.1.new mv -f filter_hssp.1.new filter_hssp.1 dh_installcatalogs -a -O--parallel dh_installcron -a -O--parallel dh_installdebconf -a -O--parallel install -o 0 -g 0 -d debian/profphd-utils/DEBIAN dh_installemacsen -a -O--parallel dh_installifupdown -a -O--parallel dh_installinfo -a -O--parallel dh_installinit -a -O--parallel dh_installmenu -a -O--parallel dh_installmime -a -O--parallel dh_installmodules -a -O--parallel dh_installlogcheck -a -O--parallel dh_installlogrotate -a -O--parallel dh_installpam -a -O--parallel dh_installppp -a -O--parallel dh_installudev -a -O--parallel dh_installwm -a -O--parallel dh_installxfonts -a -O--parallel dh_installgsettings -a -O--parallel dh_bugfiles -a -O--parallel dh_ucf -a -O--parallel dh_lintian -a -O--parallel dh_gconf -a -O--parallel dh_icons -a -O--parallel dh_perl -a -O--parallel dh_usrlocal -a -O--parallel dh_link -a -O--parallel dh_compress -a -O--parallel cd debian/profphd-utils chmod a-x usr/share/man/man1/convert_seq.1 usr/share/man/man1/filter_hssp.1 usr/share/doc/profphd-utils/changelog.Debian usr/share/doc/profphd-utils/changelog gzip -9nf usr/share/man/man1/convert_seq.1 usr/share/man/man1/filter_hssp.1 usr/share/doc/profphd-utils/changelog.Debian usr/share/doc/profphd-utils/changelog cd '/«PKGBUILDDIR»' dh_fixperms -a -O--parallel find debian/profphd-utils -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/profphd-utils ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/profphd-utils/usr/share/doc -type f ! -regex 'debian/profphd-utils/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 644 find debian/profphd-utils/usr/share/doc -type d -print0 2>/dev/null | xargs -0r chmod 755 find debian/profphd-utils/usr/share/man debian/profphd-utils/usr/man/ debian/profphd-utils/usr/X11*/man/ -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/profphd-utils -perm -5 -type f \( -name '*.so.*' -or -name '*.so' -or -name '*.la' -or -name '*.a' \) -print0 2>/dev/null | xargs -0r chmod 644 find debian/profphd-utils/usr/include -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/profphd-utils/usr/share/applications -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/profphd-utils -perm -5 -type f \( -name '*.cmxs' \) -print0 2>/dev/null | xargs -0r chmod 644 find debian/profphd-utils/usr/lib/perl5 debian/profphd-utils/usr/share/perl5 -type f -perm -5 -name '*.pm' -print0 2>/dev/null | xargs -0r chmod a-X find debian/profphd-utils/usr/bin -type f -print0 2>/dev/null | xargs -0r chmod a+x find debian/profphd-utils/usr/lib -type f -name '*.ali' -print0 2>/dev/null | xargs -0r chmod uga-w dh_strip -a -O--parallel strip --remove-section=.comment --remove-section=.note debian/profphd-utils/usr/bin/filter_hssp strip --remove-section=.comment --remove-section=.note debian/profphd-utils/usr/bin/convert_seq dh_makeshlibs -a -O--parallel rm -f debian/profphd-utils/DEBIAN/shlibs dh_shlibdeps -a -O--parallel dpkg-shlibdeps -Tdebian/profphd-utils.substvars debian/profphd-utils/usr/bin/filter_hssp debian/profphd-utils/usr/bin/convert_seq dh_installdeb -a -O--parallel dh_gencontrol -a -O--parallel echo misc:Depends= >> debian/profphd-utils.substvars dpkg-gencontrol -ldebian/changelog -Tdebian/profphd-utils.substvars -Pdebian/profphd-utils chmod 644 debian/profphd-utils/DEBIAN/control chown 0:0 debian/profphd-utils/DEBIAN/control dh_md5sums -a -O--parallel (cd debian/profphd-utils >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null chmod 644 debian/profphd-utils/DEBIAN/md5sums chown 0:0 debian/profphd-utils/DEBIAN/md5sums dh_builddeb -a -O--parallel dpkg-deb --build debian/profphd-utils .. dpkg-deb: building package `profphd-utils' in `../profphd-utils_1.0.9-1_armhf.deb'. dpkg-genchanges -B -mbuildd >../profphd-utils_1.0.9-1_armhf.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build profphd-utils-1.0.9 dpkg-buildpackage: binary only upload (no source included) ──────────────────────────────────────────────────────────────────────────────── Build finished at 20120612-0318 Finished ──────── I: Built successfully ┌──────────────────────────────────────────────────────────────────────────────┐ │ Changes │ └──────────────────────────────────────────────────────────────────────────────┘ profphd-utils_1.0.9-1_armhf.changes: ──────────────────────────────────── Format: 1.8 Date: Fri, 01 Jun 2012 12:56:21 +0200 Source: profphd-utils Binary: profphd-utils Architecture: armhf Version: 1.0.9-1 Distribution: testing Urgency: low Maintainer: buildd Changed-By: Laszlo Kajan Description: profphd-utils - profphd helper utilities convert_seq and filter_hssp Changes: profphd-utils (1.0.9-1) unstable; urgency=low . * New upstream release. * Changed from cdbs to dh. Checksums-Sha1: e32bb9443a98037219a7fccc021d9cf8cf1c751a 448648 profphd-utils_1.0.9-1_armhf.deb Checksums-Sha256: 37d445d5ff6d6fadef53bd7a4d29d8983946b903aa0daae16e11256ccafa4df3 448648 profphd-utils_1.0.9-1_armhf.deb Files: 7246944c3c5c4f85af038cd47756cef2 448648 science extra profphd-utils_1.0.9-1_armhf.deb ┌──────────────────────────────────────────────────────────────────────────────┐ │ Package contents │ └──────────────────────────────────────────────────────────────────────────────┘ profphd-utils_1.0.9-1_armhf.deb ─────────────────────────────── new debian package, version 2.0. size 448648 bytes: control archive= 817 bytes. 613 bytes, 14 lines control 553 bytes, 8 lines md5sums Package: profphd-utils Version: 1.0.9-1 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 964 Depends: libc6 (>= 2.13-28), libgcc1 (>= 1:4.4.0), libgfortran3 (>= 4.6) Recommends: profphd Section: science Priority: extra Homepage: http://www.rostlab.org/ Description: profphd helper utilities convert_seq and filter_hssp The package provides the following binary utilities: convert_seq, filter_hssp. These are used by prof from the profphd package: a secondary structure, accessibility and transmembrane helix predictor from Burkhard Rost. drwxr-xr-x root/root 0 2012-06-12 03:17 ./ drwxr-xr-x root/root 0 2012-06-12 03:17 ./usr/ drwxr-xr-x root/root 0 2012-06-12 03:17 ./usr/share/ drwxr-xr-x root/root 0 2012-06-12 03:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2012-06-12 03:17 ./usr/share/doc/profphd-utils/ -rw-r--r-- root/root 725 2012-06-01 07:50 ./usr/share/doc/profphd-utils/changelog.Debian.gz -rw-r--r-- root/root 179 2011-09-27 02:38 ./usr/share/doc/profphd-utils/README.Debian -rw-r--r-- root/root 2051 2011-09-27 02:35 ./usr/share/doc/profphd-utils/copyright -rw-r--r-- root/root 418 2012-06-01 07:17 ./usr/share/doc/profphd-utils/changelog.gz drwxr-xr-x root/root 0 2012-06-12 03:17 ./usr/share/man/ drwxr-xr-x root/root 0 2012-06-12 03:17 ./usr/share/man/man1/ -rw-r--r-- root/root 2322 2012-06-12 03:17 ./usr/share/man/man1/filter_hssp.1.gz -rw-r--r-- root/root 2382 2012-06-12 03:17 ./usr/share/man/man1/convert_seq.1.gz drwxr-xr-x root/root 0 2012-06-12 03:17 ./usr/bin/ -rwxr-xr-x root/root 460592 2012-06-12 03:17 ./usr/bin/filter_hssp -rwxr-xr-x root/root 481072 2012-06-12 03:17 ./usr/bin/convert_seq ┌──────────────────────────────────────────────────────────────────────────────┐ │ Post Build │ └──────────────────────────────────────────────────────────────────────────────┘ ┌──────────────────────────────────────────────────────────────────────────────┐ │ Cleanup │ └──────────────────────────────────────────────────────────────────────────────┘ Purging /«BUILDDIR» Reading package lists... Building dependency tree... Reading state information... 0 upgraded, 0 newly installed, 0 to remove and 6 not upgraded. Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: bsdmainutils* debhelper* file* gettext* gettext-base* gfortran* gfortran-4.6* groff-base* html2text* intltool-debian* libasprintf0c2* libcroco3* libffi5* libgettextpo0* libgfortran3* libglib2.0-0* libmagic1* libpcre3* libpipeline1* libunistring0* libxml2* man-db* po-debconf* sbuild-build-depends-core-dummy* sbuild-build-depends-profphd-utils-dummy* 0 upgraded, 0 newly installed, 25 to remove and 6 not upgraded. After this operation, 37.0 MB disk space will be freed. (Reading database ... 12067 files and directories currently installed.) Removing sbuild-build-depends-profphd-utils-dummy ... Removing debhelper ... Removing man-db ... Purging configuration files for man-db ... Removing bsdmainutils ... Purging configuration files for bsdmainutils ... Removing file ... Removing po-debconf ... Removing intltool-debian ... Removing gettext ... Removing gettext-base ... Removing gfortran ... Removing gfortran-4.6 ... Removing groff-base ... Purging configuration files for groff-base ... Removing html2text ... Purging configuration files for html2text ... Removing libasprintf0c2:armhf ... Removing libcroco3:armhf ... Purging configuration files for libcroco3:armhf ... Removing libglib2.0-0:armhf ... Purging configuration files for libglib2.0-0:armhf ... Removing libffi5:armhf ... Purging configuration files for libffi5:armhf ... Removing libgettextpo0:armhf ... Removing libgfortran3:armhf ... Purging configuration files for libgfortran3:armhf ... Removing libmagic1:armhf ... Purging configuration files for libmagic1:armhf ... Removing libpcre3:armhf ... Purging configuration files for libpcre3:armhf ... Removing libpipeline1:armhf ... Purging configuration files for libpipeline1:armhf ... Removing libunistring0:armhf ... Purging configuration files for libunistring0:armhf ... Removing libxml2:armhf ... Purging configuration files for libxml2:armhf ... Removing sbuild-build-depends-core-dummy ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Summary │ └──────────────────────────────────────────────────────────────────────────────┘ Architecture: armhf Build-Space: 5344 Build-Time: 522 Distribution: testing Install-Time: 97 Job: profphd-utils_1.0.9-1 Package: profphd-utils Package-Time: 641 Source-Version: 1.0.9-1 Space: 5344 Status: successful Version: 1.0.9-1 ──────────────────────────────────────────────────────────────────────────────── Finished at 20120612-0318 Build needed 00:10:41, 5344k disc space