# This output was generated with AUGUSTUS (version 3.2.2).
# AUGUSTUS is a gene prediction tool written by M. Stanke (mario.stanke@uni-greifswald.de),
# O. Keller, S. König, L. Gerischer and L. Romoth.
# Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008),
# Using native and syntenically mapped cDNA alignments to improve de novo gene finding
# Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013
#
#----- prediction for species 'monDom5' -----
#
#----- prediction on sequence range chr6:22086-165974 (143889bp) -----
#
# start gene g1
chr6	AUGUSTUS	gene	28615	45803	0	-	.	g1
chr6	AUGUSTUS	transcript	28615	45803	.	-	.	g1.t1
chr6	AUGUSTUS	CDS	28615	28672	0.59	-	2	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	CDS	28770	28866	0.97	-	0	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	CDS	28945	29043	0.72	-	0	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	CDS	43146	43240	0.19	-	2	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	CDS	45743	45803	0.78	-	0	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	start_codon	45801	45803	.	-	0	transcript_id "g1.t1"; gene_id "g1";
# protein sequence = [MSAQAQMRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECTKIHDLALRADYEIASKDR
# DLFFELDPVAEVALLAYSSHIHSDMLECNGLGNVGISIDDSCHFPFFNSFLFTYMNSD]
# Evidence for and against this transcript:
# % of transcript supported by hints (any source): 0
# CDS exons: 0/5
# CDS introns: 0/4
# 5'UTR exons and introns: 0/0
# 3'UTR exons and introns: 0/0
# hint groups fully obeyed: 29
#     RM:  29 
# incompatible hint groups: 0
# end gene g1
###
# start gene g2
chr6	AUGUSTUS	gene	156845	164968	0	+	.	g2
chr6	AUGUSTUS	transcript	156845	164968	.	+	.	g2.t1
chr6	AUGUSTUS	start_codon	156845	156847	.	+	0	transcript_id "g2.t1"; gene_id "g2";
chr6	AUGUSTUS	CDS	156845	157106	.	+	0	transcript_id "g2.t1"; gene_id "g2";
chr6	AUGUSTUS	CDS	160420	160536	0.96	+	2	transcript_id "g2.t1"; gene_id "g2";
chr6	AUGUSTUS	CDS	162944	163132	0.23	+	2	transcript_id "g2.t1"; gene_id "g2";
chr6	AUGUSTUS	CDS	164838	164968	0.01	+	2	transcript_id "g2.t1"; gene_id "g2";
# protein sequence = [MDKELEAEIHPLKHDDKVPQSNLKNQTEKDGSFKKASRHSRFAQCRTMFFFFSLFTCLFVVFIISFIIPCPDRPVSQK
# TWKINYDKAVTYDFLVFKDINKDRVQDVLFLHKDDNSNNDFNISCIDEGFSSPCTFLAAVSGTNGSLIWDRPVAQDIAFIECVDSQEMDELLWCCFIV
# GKPGSLTAVDFYTGETLWNQSYTFGGNASVLYPFLNIPDVNDDEIQDLLFFTKSGRQ]
# Evidence for and against this transcript:
# % of transcript supported by hints (any source): 0
# CDS exons: 0/4
# CDS introns: 0/3
# 5'UTR exons and introns: 0/0
# 3'UTR exons and introns: 0/0
# hint groups fully obeyed: 14
#     RM:  14 
# incompatible hint groups: 0
# end gene g2
###
