# This output was generated with AUGUSTUS (version 3.2.2).
# AUGUSTUS is a gene prediction tool written by M. Stanke (mario.stanke@uni-greifswald.de),
# O. Keller, S. König, L. Gerischer and L. Romoth.
# Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008),
# Using native and syntenically mapped cDNA alignments to improve de novo gene finding
# Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013
#
#----- prediction for species 'bosTau8' -----
#
chr25	SAMPLING	intron	87468	87570	3.97	+	.	Name=intron;postProb=0.99;avgBaseProb=0.997
chr25	SAMPLING	intron	87769	87848	3.87	+	.	Name=intron;postProb=0.96;avgBaseProb=1
chr25	SAMPLING	intron	87970	88045	4.12	+	.	Name=intron;postProb=1;avgBaseProb=1
chr25	SAMPLING	intron	88228	88340	2.38	+	.	Name=intron;postProb=0.73;avgBaseProb=0.983
chr25	SAMPLING	intron	88452	88573	3.07	+	.	Name=intron;postProb=0.84;avgBaseProb=1
chr25	SAMPLING	intron	88228	88573	-2.32	+	.	Name=intron;postProb=0.15;avgBaseProb=0.728
chr25	SAMPLING	intron	87769	87866	-2.23	+	.	Name=intron;postProb=0.04;avgBaseProb=0.824
chr25	SAMPLING	intron	88244	88356	-1.5	+	.	Name=intron;postProb=0.12;avgBaseProb=0.897
chr25	SAMPLING	intron	87503	87570	-1.57	+	.	Name=intron;postProb=0.01;avgBaseProb=1
chr25	SAMPLING	intron	88431	88573	-2.28	+	.	Name=intron;postProb=0.01;avgBaseProb=0.877
chr25	SAMPLING	intron	89096	89653	-6.21	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.0182
chr25	SAMPLING	intron	89763	90390	3.57	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr25	SAMPLING	intron	90559	92028	-1.35	-	.	Name=rintron;postProb=0.19;avgBaseProb=0.996
chr25	SAMPLING	intron	92137	93475	-1.22	-	.	Name=rintron;postProb=0.21;avgBaseProb=0.992
chr25	SAMPLING	intron	93722	95733	3.03	-	.	Name=rintron;postProb=0.96;avgBaseProb=0.999
chr25	SAMPLING	intron	95905	96336	3.66	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr25	SAMPLING	intron	96867	100196	-2.33	-	.	Name=rintron;postProb=0.16;avgBaseProb=0.854
chr25	SAMPLING	intron	100335	101002	-1.2	-	.	Name=rintron;postProb=0.18;avgBaseProb=0.995
chr25	SAMPLING	intron	101210	101531	0.236	-	.	Name=rintron;postProb=0.4;avgBaseProb=0.99
chr25	SAMPLING	intron	89194	89653	-6.15	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.02
chr25	SAMPLING	intron	90559	93475	1.37	-	.	Name=rintron;postProb=0.7;avgBaseProb=0.986
chr25	SAMPLING	intron	97044	100196	-1.52	-	.	Name=rintron;postProb=0.28;avgBaseProb=0.877
chr25	SAMPLING	intron	100335	101531	0.399	-	.	Name=rintron;postProb=0.52;avgBaseProb=0.946
chr25	SAMPLING	intron	92137	92576	-2.06	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.998
chr25	SAMPLING	intron	92734	93024	-1.98	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.992
chr25	SAMPLING	intron	93093	93475	-1.85	-	.	Name=rintron;postProb=0.04;avgBaseProb=1
chr25	SAMPLING	intron	100335	101128	-0.972	-	.	Name=rintron;postProb=0.25;avgBaseProb=0.965
chr25	SAMPLING	intron	96923	99466	-2.42	-	.	Name=rintron;postProb=0.13;avgBaseProb=0.856
chr25	SAMPLING	intron	99594	100196	-0.952	-	.	Name=rintron;postProb=0.25;avgBaseProb=0.952
chr25	SAMPLING	intron	100335	102907	-4.69	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.465
chr25	SAMPLING	intron	90599	92652	-2.53	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.984
chr25	SAMPLING	intron	92734	92901	-1.75	-	.	Name=rintron;postProb=0.02;avgBaseProb=1
chr25	SAMPLING	intron	96923	100105	-2.79	-	.	Name=rintron;postProb=0.07;avgBaseProb=0.864
chr25	SAMPLING	intron	102939	103315	-5.6	-	.	Name=rintron;postProb=0.04;avgBaseProb=0.1
chr25	SAMPLING	intron	103457	103762	2.75	-	.	Name=rintron;postProb=0.84;avgBaseProb=0.98
chr25	SAMPLING	intron	93722	94836	-2.3	-	.	Name=rintron;postProb=0.01;avgBaseProb=1
chr25	SAMPLING	intron	95023	95733	-2.18	-	.	Name=rintron;postProb=0.01;avgBaseProb=1
chr25	SAMPLING	intron	100335	100542	-1.86	-	.	Name=rintron;postProb=0.01;avgBaseProb=1
chr25	SAMPLING	intron	100681	101531	-2.53	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.927
chr25	SAMPLING	intron	96867	99482	-3.06	-	.	Name=rintron;postProb=0.03;avgBaseProb=0.842
chr25	SAMPLING	intron	90559	90855	-1.96	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.999
chr25	SAMPLING	intron	90916	93475	-2.58	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.984
chr25	SAMPLING	intron	101117	101531	-2.32	-	.	Name=rintron;postProb=0.03;avgBaseProb=0.906
chr25	SAMPLING	intron	90559	91935	-2.13	-	.	Name=rintron;postProb=0.05;avgBaseProb=0.999
chr25	SAMPLING	intron	96959	99466	-3.03	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.861
chr25	SAMPLING	intron	100335	100587	-1.86	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.998
chr25	SAMPLING	intron	100681	101002	-1.92	-	.	Name=rintron;postProb=0.02;avgBaseProb=1
chr25	SAMPLING	intron	97044	99482	-2.81	-	.	Name=rintron;postProb=0.05;avgBaseProb=0.871
chr25	SAMPLING	intron	96959	99482	-3.1	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.86
chr25	SAMPLING	intron	99594	100105	-2.19	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.963
chr25	SAMPLING	intron	96822	100196	-3.18	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.843
chr25	SAMPLING	intron	96923	99482	-3.12	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.855
chr25	SAMPLING	intron	96959	100105	-3.12	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.868
chr25	SAMPLING	intron	96923	97548	-2.91	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.804
chr25	SAMPLING	intron	97631	100196	-3.02	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.88
chr25	SAMPLING	intron	90559	92576	-2.52	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.984
chr25	SAMPLING	intron	96864	100196	-3.02	-	.	Name=rintron;postProb=0.04;avgBaseProb=0.854
chr25	SAMPLING	intron	92228	93024	-2.24	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.992
chr25	SAMPLING	intron	96902	99466	-3.14	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.851
chr25	SAMPLING	intron	90559	95733	-2.81	-	.	Name=rintron;postProb=0.03;avgBaseProb=0.946
chr25	SAMPLING	intron	92095	93475	-2.41	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.986
chr25	SAMPLING	intron	101201	101531	-2.07	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.979
chr25	SAMPLING	intron	97589	99482	-2.97	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.872
chr25	SAMPLING	intron	96902	100105	-3.16	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.86
chr25	SAMPLING	intron	98842	100196	-2.82	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.888
chr25	SAMPLING	intron	99640	100196	-1.89	-	.	Name=rintron;postProb=0.08;avgBaseProb=0.958
chr25	SAMPLING	intron	99973	100196	-1.89	-	.	Name=rintron;postProb=0.04;avgBaseProb=0.955
chr25	SAMPLING	intron	102202	103315	-6.01	-	.	Name=rintron;postProb=0.03;avgBaseProb=0.0826
chr25	SAMPLING	intron	102280	103315	-6.1	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.0851
chr25	SAMPLING	intron	102364	103315	-6.01	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.0873
chr25	SAMPLING	intron	103457	108266	-6.07	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.186
chr25	SAMPLING	intron	108344	114939	-6.4	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.128
chr25	SAMPLING	intron	103457	103946	-3.49	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.663
chr25	SAMPLING	intron	103982	114939	-6.53	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.13
chr25	SAMPLING	intron	103457	105842	-5.41	-	.	Name=rintron;postProb=0.05;avgBaseProb=0.245
chr25	SAMPLING	intron	105937	111502	-6.18	-	.	Name=rintron;postProb=0.04;avgBaseProb=0.129
chr25	SAMPLING	intron	111602	114939	-5.93	-	.	Name=rintron;postProb=0.06;avgBaseProb=0.13
chr25	SAMPLING	intron	111602	113751	-6.04	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.13
chr25	SAMPLING	intron	113781	114939	-5.88	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.13
chr25	SAMPLING	intron	105937	114939	-6.48	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.129
chr25	SAMPLING	intron	103457	114939	-6.39	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.152
chr25	SAMPLING	intron	103851	111502	-6.43	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.131
chr25	SAMPLING	intron	103457	111092	-6.17	-	.	Name=rintron;postProb=0.03;avgBaseProb=0.165
chr25	SAMPLING	intron	111205	111502	-5.47	-	.	Name=rintron;postProb=0.03;avgBaseProb=0.13
chr25	SAMPLING	intron	103457	105239	-5.41	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.284
chr25	SAMPLING	intron	105282	105430	-5.36	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.14
chr25	SAMPLING	intron	103457	103766	-2.09	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.969
chr25	SAMPLING	CDS	87571	87768	1.43	+	0	Name=internal0;postProb=1;avgBaseProb=1
chr25	SAMPLING	CDS	87849	87969	1.08	+	0	Name=internal1;postProb=0.96;avgBaseProb=0.994
chr25	SAMPLING	CDS	88046	88227	0.831	+	2	Name=internal0;postProb=0.88;avgBaseProb=1
chr25	SAMPLING	CDS	88341	88451	-0.175	+	0	Name=internal0;postProb=0.72;avgBaseProb=0.831
chr25	SAMPLING	CDS	88574	88648	1.12	+	0	Name=terminal;postProb=1;avgBaseProb=1
chr25	SAMPLING	CDS	87867	87969	-3.38	+	0	Name=internal1;postProb=0.04;avgBaseProb=1
chr25	SAMPLING	CDS	88046	88243	-2.81	+	2	Name=internal1;postProb=0.12;avgBaseProb=0.929
chr25	SAMPLING	CDS	88357	88451	-3.09	+	2	Name=internal0;postProb=0.12;avgBaseProb=0.848
chr25	SAMPLING	CDS	87468	87502	-4.34	+	2	Name=internal0;postProb=0.01;avgBaseProb=0.01
chr25	SAMPLING	CDS	88341	88430	-3.64	+	0	Name=internal0;postProb=0.01;avgBaseProb=0.829
chr25	SAMPLING	CDS	89084	89095	-4.68	-	0	Name=rterminal2;postProb=0.01;avgBaseProb=0.01
chr25	SAMPLING	CDS	89654	89762	-3.45	-	1	Name=rinternal1;postProb=0.02;avgBaseProb=1
chr25	SAMPLING	CDS	90391	90558	1.33	-	1	Name=rinternal1;postProb=0.99;avgBaseProb=1
chr25	SAMPLING	CDS	92029	92136	-3.1	-	1	Name=rinternal1;postProb=0.17;avgBaseProb=0.236
chr25	SAMPLING	CDS	93476	93721	1.35	-	1	Name=rinternal1;postProb=0.97;avgBaseProb=0.97
chr25	SAMPLING	CDS	95734	95904	1.39	-	1	Name=rinternal1;postProb=1;avgBaseProb=1
chr25	SAMPLING	CDS	96337	96866	-2.13	-	0	Name=rinternal2;postProb=0.19;avgBaseProb=0.991
chr25	SAMPLING	CDS	100197	100334	0.79	-	0	Name=rinternal2;postProb=0.89;avgBaseProb=1
chr25	SAMPLING	CDS	101003	101209	-2.92	-	0	Name=rinternal2;postProb=0.16;avgBaseProb=0.276
chr25	SAMPLING	CDS	101532	101789	1.36	-	0	Name=rinitial;postProb=0.97;avgBaseProb=0.97
chr25	SAMPLING	CDS	89119	89427	-3.53	-	0	Name=rsingle;postProb=0.03;avgBaseProb=0.0324
chr25	SAMPLING	CDS	89119	89193	-4.08	-	0	Name=rterminal2;postProb=0.01;avgBaseProb=0.04
chr25	SAMPLING	CDS	96337	97043	-1.44	-	0	Name=rinternal2;postProb=0.33;avgBaseProb=0.85
chr25	SAMPLING	CDS	89636	89762	1.19	-	1	Name=rterminal1;postProb=0.98;avgBaseProb=0.997
chr25	SAMPLING	CDS	92577	92733	-3.8	-	2	Name=rinternal0;postProb=0.02;avgBaseProb=0.0252
chr25	SAMPLING	CDS	93025	93092	-4.06	-	1	Name=rinternal1;postProb=0.02;avgBaseProb=0.04
chr25	SAMPLING	CDS	101129	101209	-2.77	-	0	Name=rinternal2;postProb=0.24;avgBaseProb=0.409
chr25	SAMPLING	CDS	96337	96839	-2.43	-	0	Name=rinitial;postProb=0.13;avgBaseProb=0.999
chr25	SAMPLING	CDS	96337	96922	-1.93	-	2	Name=rinternal0;postProb=0.23;avgBaseProb=0.955
chr25	SAMPLING	CDS	99467	99593	-3.09	-	0	Name=rinternal2;postProb=0.16;avgBaseProb=0.239
chr25	SAMPLING	CDS	102908	102931	-4.44	-	0	Name=rinitial;postProb=0.01;avgBaseProb=0.05
chr25	SAMPLING	CDS	90391	90598	-3.38	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=0.81
chr25	SAMPLING	CDS	92653	92733	-4.06	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=0.03
chr25	SAMPLING	CDS	92902	93092	-3.73	-	1	Name=rinternal1;postProb=0.02;avgBaseProb=0.0271
chr25	SAMPLING	CDS	100106	100334	-2.95	-	0	Name=rinternal2;postProb=0.11;avgBaseProb=0.646
chr25	SAMPLING	CDS	102908	102938	-4.36	-	1	Name=rinternal1;postProb=0.01;avgBaseProb=0.0477
chr25	SAMPLING	CDS	103316	103456	-3	-	1	Name=rinternal1;postProb=0.1;avgBaseProb=0.98
chr25	SAMPLING	CDS	103763	103929	-3.08	-	0	Name=rinitial;postProb=0.15;avgBaseProb=0.188
chr25	SAMPLING	CDS	94837	95022	-3.8	-	1	Name=rinternal1;postProb=0.01;avgBaseProb=0.01
chr25	SAMPLING	CDS	100543	100680	-3.89	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=0.0235
chr25	SAMPLING	CDS	99483	99593	-3.47	-	0	Name=rinternal2;postProb=0.09;avgBaseProb=0.25
chr25	SAMPLING	CDS	90856	90915	-4.16	-	1	Name=rinternal1;postProb=0.01;avgBaseProb=0.01
chr25	SAMPLING	CDS	101003	101116	-3.77	-	0	Name=rinternal2;postProb=0.03;avgBaseProb=0.194
chr25	SAMPLING	CDS	91936	92136	-3.51	-	1	Name=rinternal1;postProb=0.05;avgBaseProb=0.15
chr25	SAMPLING	CDS	96337	96958	-2.83	-	2	Name=rinternal0;postProb=0.04;avgBaseProb=0.921
chr25	SAMPLING	CDS	100588	100680	-3.96	-	0	Name=rinternal2;postProb=0.02;avgBaseProb=0.03
chr25	SAMPLING	CDS	99483	99593	-3.91	-	2	Name=rinternal0;postProb=0.02;avgBaseProb=0.02
chr25	SAMPLING	CDS	96337	96821	-2.97	-	0	Name=rinternal2;postProb=0.02;avgBaseProb=1
chr25	SAMPLING	CDS	97549	97630	-4.06	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=0.0149
chr25	SAMPLING	CDS	96337	96863	-2.85	-	0	Name=rinternal2;postProb=0.04;avgBaseProb=0.992
chr25	SAMPLING	CDS	92029	92227	-3.72	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=0.133
chr25	SAMPLING	CDS	96337	96901	-2.94	-	2	Name=rinternal0;postProb=0.02;avgBaseProb=0.968
chr25	SAMPLING	CDS	101003	101053	-4.12	-	0	Name=rinitial;postProb=0.01;avgBaseProb=0.2
chr25	SAMPLING	CDS	92029	92094	-4.02	-	1	Name=rinternal1;postProb=0.01;avgBaseProb=0.24
chr25	SAMPLING	CDS	101129	101200	-3.91	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=0.41
chr25	SAMPLING	CDS	97549	97588	-4.29	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=0.02
chr25	SAMPLING	CDS	98809	98841	-4.35	-	0	Name=rterminal2;postProb=0.01;avgBaseProb=0.01
chr25	SAMPLING	CDS	99601	99639	-3.93	-	0	Name=rterminal2;postProb=0.08;avgBaseProb=0.08
chr25	SAMPLING	CDS	99964	99972	-4.62	-	0	Name=rterminal2;postProb=0.04;avgBaseProb=0.04
chr25	SAMPLING	CDS	102183	102201	-4.42	-	1	Name=rterminal1;postProb=0.03;avgBaseProb=0.04
chr25	SAMPLING	CDS	102183	102279	-4	-	1	Name=rterminal1;postProb=0.01;avgBaseProb=0.0159
chr25	SAMPLING	CDS	103763	103770	-1.21	-	0	Name=rinitial;postProb=0.68;avgBaseProb=0.84
chr25	SAMPLING	CDS	102354	102363	-4.69	-	1	Name=rterminal1;postProb=0.02;avgBaseProb=0.02
chr25	SAMPLING	CDS	108267	108343	-4.08	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=0.01
chr25	SAMPLING	CDS	102896	102938	-4.16	-	1	Name=rterminal1;postProb=0.03;avgBaseProb=0.0428
chr25	SAMPLING	CDS	103947	103981	-4.34	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=0.01
chr25	SAMPLING	CDS	103312	103456	0.747	-	1	Name=rterminal1;postProb=0.88;avgBaseProb=0.977
chr25	SAMPLING	CDS	105843	105936	-3.81	-	2	Name=rinternal0;postProb=0.05;avgBaseProb=0.05
chr25	SAMPLING	CDS	111503	111601	-3.63	-	2	Name=rinternal0;postProb=0.08;avgBaseProb=0.08
chr25	SAMPLING	CDS	113752	113780	-4.34	-	1	Name=rinternal1;postProb=0.02;avgBaseProb=0.02
chr25	SAMPLING	CDS	103763	103850	-3.94	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=0.222
chr25	SAMPLING	CDS	111093	111204	-3.85	-	2	Name=rinternal0;postProb=0.03;avgBaseProb=0.03
chr25	SAMPLING	CDS	105240	105281	-4.28	-	1	Name=rinternal1;postProb=0.01;avgBaseProb=0.01
chr25	SAMPLING	CDS	105431	105504	-4.09	-	0	Name=rinitial;postProb=0.01;avgBaseProb=0.01
chr25	SAMPLING	CDS	103767	103939	-3.82	-	0	Name=rinitial;postProb=0.01;avgBaseProb=0.01
