# This output was generated with AUGUSTUS (version 3.2.2).
# AUGUSTUS is a gene prediction tool written by M. Stanke (mario.stanke@uni-greifswald.de),
# O. Keller, S. König, L. Gerischer and L. Romoth.
# Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008),
# Using native and syntenically mapped cDNA alignments to improve de novo gene finding
# Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013
#
#----- prediction for species 'monDom5' -----
#
#----- prediction on sequence range chr6:302453-480031 (177579bp) -----
#
# start gene g1
chr6	AUGUSTUS	gene	319894	436733	0	-	.	g1
chr6	AUGUSTUS	transcript	319894	436733	.	-	.	g1.t1
chr6	AUGUSTUS	stop_codon	319894	319896	.	-	0	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	CDS	319894	320038	0.29	-	1	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	CDS	435856	436733	0.5	-	0	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	start_codon	436731	436733	.	-	0	transcript_id "g1.t1"; gene_id "g1";
# protein sequence = [MNVQEQGFPLDLGGSFTEDAPRPPVPGEEGELVSTDPRPVSHNFYFGKGDGIKSETSTATPRRSDLDLGYEPEGSASP
# TPPYLKWAESLHSLLDDQDGINLFRTFLKQEDSADLLDFWFACSGFRKLEPCDSNEEKRLKLAKAIYRKYILDNNGIVSRQTKPATKSFIKDCIMKQH
# IDPAMFDQAQTEVQSMMEDNTYPLFLKSDIYLEYTRTGLESPKIFSDQSPGSGTGKGIPGYLPTLNEDEEWKCDQDTEEDNGRDSAPSSRLTQKLLME
# TAPQRASSNRRYSESREFRHGSWREPVNPYYVNSGYALAPATSANDSEQQSMSSDADTMSLTDSSV]
# Evidence for and against this transcript:
# % of transcript supported by hints (any source): 0
# CDS exons: 0/2
# CDS introns: 0/1
# 5'UTR exons and introns: 0/0
# 3'UTR exons and introns: 0/0
# hint groups fully obeyed: 195
#     RM: 195 
# incompatible hint groups: 0
# end gene g1
###
# start gene g2
chr6	AUGUSTUS	gene	477815	478465	0	-	.	g2
chr6	AUGUSTUS	transcript	477815	478465	.	-	.	g2.t1
chr6	AUGUSTUS	stop_codon	477815	477817	.	-	0	transcript_id "g2.t1"; gene_id "g2";
chr6	AUGUSTUS	CDS	477815	478184	.	-	1	transcript_id "g2.t1"; gene_id "g2";
chr6	AUGUSTUS	CDS	478410	478465	.	-	0	transcript_id "g2.t1"; gene_id "g2";
chr6	AUGUSTUS	start_codon	478463	478465	.	-	0	transcript_id "g2.t1"; gene_id "g2";
# protein sequence = [MADSGRAGQEEAPRVRQVRRRNKEIHMGERAGGVSIGGKKKSHCAMVPLKSFSSAFHIKFRIGATSKTPSWAGLSRVL
# PSSPPPTRPPFSPVTTSWTMRHFIVKSVGLKKRVHGKKEGKKISHLKRGTAAPRCPNLITRDF]
# Evidence for and against this transcript:
# % of transcript supported by hints (any source): 0
# CDS exons: 0/2
# CDS introns: 0/0
# 5'UTR exons and introns: 0/0
# 3'UTR exons and introns: 0/0
# hint groups fully obeyed: 0
# incompatible hint groups: 0
# end gene g2
###
