# This output was generated with AUGUSTUS (version 3.2.2).
# AUGUSTUS is a gene prediction tool written by M. Stanke (mario.stanke@uni-greifswald.de),
# O. Keller, S. König, L. Gerischer and L. Romoth.
# Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008),
# Using native and syntenically mapped cDNA alignments to improve de novo gene finding
# Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013
#
#----- prediction for species 'rheMac3' -----
#
chr20	SAMPLING	intron	187424	190817	-6.58	+	.	Name=intron;postProb=0.02;avgBaseProb=0.03
chr20	SAMPLING	intron	187424	194328	-6.76	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.0308
chr20	SAMPLING	intron	187424	190858	-6.64	+	.	Name=intron;postProb=0.01;avgBaseProb=0.0298
chr20	SAMPLING	intron	187424	188879	-6.41	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.03
chr20	SAMPLING	intron	188950	194328	-6.75	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.0311
chr20	SAMPLING	intron	193725	194328	-6.14	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.04
chr20	SAMPLING	intron	194862	195399	3.48	-	.	Name=rintron;postProb=0.98;avgBaseProb=0.998
chr20	SAMPLING	intron	195487	195572	4.09	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	195708	196124	1.74	-	.	Name=rintron;postProb=0.76;avgBaseProb=0.869
chr20	SAMPLING	intron	196329	196949	2.47	-	.	Name=rintron;postProb=0.81;avgBaseProb=1
chr20	SAMPLING	intron	197107	199327	-0.578	-	.	Name=rintron;postProb=0.37;avgBaseProb=0.957
chr20	SAMPLING	intron	199609	199931	3.74	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	200049	201330	3.03	-	.	Name=rintron;postProb=0.94;avgBaseProb=0.999
chr20	SAMPLING	intron	201457	201536	2.59	-	.	Name=rintron;postProb=0.82;avgBaseProb=0.885
chr20	SAMPLING	intron	201716	202069	2.7	-	.	Name=rintron;postProb=0.83;avgBaseProb=0.991
chr20	SAMPLING	intron	202207	202445	3.13	-	.	Name=rintron;postProb=0.88;avgBaseProb=1
chr20	SAMPLING	intron	202570	202656	4.08	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	202748	203435	3.19	-	.	Name=rintron;postProb=0.94;avgBaseProb=0.998
chr20	SAMPLING	intron	203756	203843	4.08	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	204113	204306	3.82	-	.	Name=rintron;postProb=0.99;avgBaseProb=1
chr20	SAMPLING	intron	204435	204647	3.85	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	204856	204939	4.09	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	205118	205225	2.87	-	.	Name=rintron;postProb=0.8;avgBaseProb=1
chr20	SAMPLING	intron	197107	198937	-0.0307	-	.	Name=rintron;postProb=0.43;avgBaseProb=0.994
chr20	SAMPLING	intron	199097	199327	-1.92	-	.	Name=rintron;postProb=0.04;avgBaseProb=0.95
chr20	SAMPLING	intron	194862	195199	-1.93	-	.	Name=rintron;postProb=0.02;avgBaseProb=1
chr20	SAMPLING	intron	195260	195399	-1.7	-	.	Name=rintron;postProb=0.02;avgBaseProb=1
chr20	SAMPLING	intron	199128	199349	-0.647	-	.	Name=rintron;postProb=0.27;avgBaseProb=0.935
chr20	SAMPLING	intron	199077	199349	-1.58	-	.	Name=rintron;postProb=0.15;avgBaseProb=0.891
chr20	SAMPLING	intron	200004	201330	-2.49	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.966
chr20	SAMPLING	intron	195708	195944	-2.27	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.909
chr20	SAMPLING	intron	201518	202445	-3.26	-	.	Name=rintron;postProb=0.05;avgBaseProb=0.702
chr20	SAMPLING	intron	205118	205665	-4.42	-	.	Name=rintron;postProb=0.08;avgBaseProb=0.35
chr20	SAMPLING	intron	195699	195917	-2.36	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.884
chr20	SAMPLING	intron	202748	203534	-2.73	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.875
chr20	SAMPLING	intron	196287	196949	-1.34	-	.	Name=rintron;postProb=0.19;avgBaseProb=0.949
chr20	SAMPLING	intron	195699	196124	-2.61	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.851
chr20	SAMPLING	intron	197085	199320	-2.64	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.949
chr20	SAMPLING	intron	195708	195917	-1.73	-	.	Name=rintron;postProb=0.09;avgBaseProb=0.92
chr20	SAMPLING	intron	205118	211187	-6.33	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.139
chr20	SAMPLING	intron	200084	202069	-2.99	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.856
chr20	SAMPLING	intron	195633	196124	-3.11	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.74
chr20	SAMPLING	intron	197085	198948	-2.52	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.98
chr20	SAMPLING	intron	197107	198219	-2.32	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.995
chr20	SAMPLING	intron	198284	198415	-1.74	-	.	Name=rintron;postProb=0.01;avgBaseProb=1
chr20	SAMPLING	intron	198500	199036	-2.49	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.907
chr20	SAMPLING	intron	199097	199349	-2.29	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.909
chr20	SAMPLING	intron	205118	220640	-6.49	-	.	Name=rintron;postProb=0.05;avgBaseProb=0.106
chr20	SAMPLING	intron	197139	199320	-2.36	-	.	Name=rintron;postProb=0.06;avgBaseProb=0.959
chr20	SAMPLING	intron	205118	220211	-6.59	-	.	Name=rintron;postProb=0.03;avgBaseProb=0.107
chr20	SAMPLING	intron	201716	201880	-1.74	-	.	Name=rintron;postProb=0.02;avgBaseProb=1
chr20	SAMPLING	intron	200049	201536	-2.68	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.912
chr20	SAMPLING	intron	202787	203435	-1.98	-	.	Name=rintron;postProb=0.04;avgBaseProb=1
chr20	SAMPLING	intron	200070	201330	-2.33	-	.	Name=rintron;postProb=0.01;avgBaseProb=1
chr20	SAMPLING	intron	201533	202445	-3.16	-	.	Name=rintron;postProb=0.07;avgBaseProb=0.698
chr20	SAMPLING	intron	197091	199320	-2.57	-	.	Name=rintron;postProb=0.03;avgBaseProb=0.951
chr20	SAMPLING	intron	202748	203528	-2.7	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.881
chr20	SAMPLING	intron	199044	199349	-2.58	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.851
chr20	SAMPLING	intron	197091	198948	-2.5	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.983
chr20	SAMPLING	intron	201518	201880	-3.77	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.578
chr20	SAMPLING	intron	201888	202069	-1.89	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.984
chr20	SAMPLING	intron	201989	202069	-1.65	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.99
chr20	SAMPLING	intron	201478	201536	-1.97	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.894
chr20	SAMPLING	intron	195708	196202	-3.2	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.733
chr20	SAMPLING	intron	205118	206249	-5.51	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.231
chr20	SAMPLING	intron	206264	210748	-6.34	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.119
chr20	SAMPLING	intron	210823	211152	-5.69	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.11
chr20	SAMPLING	intron	205118	205253	-2.44	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.835
chr20	SAMPLING	intron	203999	204306	-3.49	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.634
chr20	SAMPLING	intron	205709	210418	-6.35	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.12
chr20	SAMPLING	intron	197107	199036	-2.51	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.97
chr20	SAMPLING	intron	195953	196062	-2.44	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.82
chr20	SAMPLING	intron	205954	206078	-5.86	+	.	Name=intron;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	intron	206185	208217	-6.58	+	.	Name=intron;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	intron	208541	220640	-6.51	+	.	Name=intron;postProb=0.06;avgBaseProb=0.07
chr20	SAMPLING	intron	208530	220640	-6.8	+	.	Name=intron;postProb=0.01;avgBaseProb=0.07
chr20	SAMPLING	CDS	190818	190993	-3.76	+	2	Name=terminal;postProb=0.02;avgBaseProb=0.0277
chr20	SAMPLING	CDS	194329	194536	-3.6	-	0	Name=rinitial;postProb=0.04;avgBaseProb=0.04
chr20	SAMPLING	CDS	190859	190993	-3.89	+	0	Name=terminal;postProb=0.01;avgBaseProb=0.03
chr20	SAMPLING	CDS	188880	188949	-4.11	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	193711	193724	-4.63	-	2	Name=rterminal0;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	194754	194861	1.24	-	0	Name=rterminal2;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	195400	195486	1.17	-	0	Name=rinternal2;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	195573	195707	0.671	-	0	Name=rinternal2;postProb=0.87;avgBaseProb=0.966
chr20	SAMPLING	CDS	196125	196328	-0.302	-	0	Name=rinternal2;postProb=0.64;avgBaseProb=0.957
chr20	SAMPLING	CDS	196950	197106	0.54	-	1	Name=rinternal1;postProb=0.83;avgBaseProb=0.992
chr20	SAMPLING	CDS	199328	199608	-1.3	-	0	Name=rinternal2;postProb=0.41;avgBaseProb=0.963
chr20	SAMPLING	CDS	199932	200048	1.07	-	0	Name=rinternal2;postProb=0.96;avgBaseProb=0.996
chr20	SAMPLING	CDS	201331	201456	0.406	-	0	Name=rinternal2;postProb=0.82;avgBaseProb=0.96
chr20	SAMPLING	CDS	201537	201715	0.611	-	2	Name=rinternal0;postProb=0.85;avgBaseProb=0.85
chr20	SAMPLING	CDS	202070	202206	0.635	-	1	Name=rinternal1;postProb=0.87;avgBaseProb=0.88
chr20	SAMPLING	CDS	202446	202569	1.28	-	2	Name=rinternal0;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	202657	202747	0.99	-	0	Name=rinternal2;postProb=0.96;avgBaseProb=1
chr20	SAMPLING	CDS	203436	203755	1.49	-	2	Name=rinternal0;postProb=0.98;avgBaseProb=0.994
chr20	SAMPLING	CDS	203844	204112	1.48	-	1	Name=rinternal1;postProb=0.99;avgBaseProb=0.996
chr20	SAMPLING	CDS	204307	204434	1.29	-	0	Name=rinternal2;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	204648	204855	1.45	-	1	Name=rinternal1;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	204940	205117	1.4	-	2	Name=rinternal0;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	205226	205304	0.084	-	0	Name=rinitial;postProb=0.8;avgBaseProb=0.8
chr20	SAMPLING	CDS	198938	199096	-3.5	-	1	Name=rinternal1;postProb=0.04;avgBaseProb=0.434
chr20	SAMPLING	CDS	196950	197185	-3.26	-	2	Name=rinternal0;postProb=0.04;avgBaseProb=0.681
chr20	SAMPLING	CDS	199350	199608	-1.02	-	0	Name=rinternal2;postProb=0.47;avgBaseProb=1
chr20	SAMPLING	CDS	195200	195259	-4.11	-	0	Name=rinternal2;postProb=0.02;avgBaseProb=0.02
chr20	SAMPLING	CDS	198938	199127	-2.5	-	2	Name=rinternal0;postProb=0.24;avgBaseProb=0.407
chr20	SAMPLING	CDS	198938	199076	-3.06	-	2	Name=rinternal0;postProb=0.14;avgBaseProb=0.452
chr20	SAMPLING	CDS	199932	200003	-3.63	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=1
chr20	SAMPLING	CDS	195945	196328	-3.29	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=0.594
chr20	SAMPLING	CDS	201331	201517	-3.23	-	1	Name=rinternal1;postProb=0.06;avgBaseProb=0.69
chr20	SAMPLING	CDS	205666	205720	-3.87	-	0	Name=rinitial;postProb=0.07;avgBaseProb=0.0778
chr20	SAMPLING	CDS	195573	195698	-3.37	-	0	Name=rinternal2;postProb=0.03;avgBaseProb=0.973
chr20	SAMPLING	CDS	195918	196328	-2.89	-	0	Name=rinternal2;postProb=0.09;avgBaseProb=0.567
chr20	SAMPLING	CDS	203535	203755	-3.27	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=1
chr20	SAMPLING	CDS	196125	196286	-2.66	-	0	Name=rinternal2;postProb=0.16;avgBaseProb=0.995
chr20	SAMPLING	CDS	196950	197084	-3.34	-	0	Name=rinternal2;postProb=0.03;avgBaseProb=1
chr20	SAMPLING	CDS	199321	199608	-2.74	-	0	Name=rinternal2;postProb=0.11;avgBaseProb=0.943
chr20	SAMPLING	CDS	211188	211218	-4.37	-	0	Name=rinitial;postProb=0.01;avgBaseProb=0.02
chr20	SAMPLING	CDS	199932	200083	-3.45	-	2	Name=rinternal0;postProb=0.02;avgBaseProb=0.773
chr20	SAMPLING	CDS	195573	195632	-3.65	-	0	Name=rinternal2;postProb=0.02;avgBaseProb=1
chr20	SAMPLING	CDS	198949	199127	-3.62	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=0.406
chr20	SAMPLING	CDS	198220	198283	-4.14	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	198416	198499	-4.05	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=0.0144
chr20	SAMPLING	CDS	199037	199096	-4.16	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	196950	197138	-3.16	-	0	Name=rinternal2;postProb=0.06;avgBaseProb=0.841
chr20	SAMPLING	CDS	220212	220248	-4.21	-	0	Name=rinitial;postProb=0.03;avgBaseProb=0.03
chr20	SAMPLING	CDS	201881	202206	-3.44	-	1	Name=rinternal1;postProb=0.01;avgBaseProb=0.379
chr20	SAMPLING	CDS	202657	202786	-3.44	-	0	Name=rinternal2;postProb=0.04;avgBaseProb=0.712
chr20	SAMPLING	CDS	199932	200069	-3.5	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=0.849
chr20	SAMPLING	CDS	201331	201532	-3.18	-	1	Name=rinternal1;postProb=0.07;avgBaseProb=0.644
chr20	SAMPLING	CDS	196950	197090	-3.27	-	0	Name=rinternal2;postProb=0.04;avgBaseProb=0.999
chr20	SAMPLING	CDS	203529	203755	-3.26	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=1
chr20	SAMPLING	CDS	198416	198452	-4.31	-	0	Name=rinitial;postProb=0.01;avgBaseProb=0.02
chr20	SAMPLING	CDS	195573	195674	-3.24	-	0	Name=rinitial;postProb=0.07;avgBaseProb=0.99
chr20	SAMPLING	CDS	198938	199043	-3.77	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=0.449
chr20	SAMPLING	CDS	198949	199076	-3.71	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=0.454
chr20	SAMPLING	CDS	195573	195656	-3.59	-	0	Name=rinitial;postProb=0.01;avgBaseProb=0.994
chr20	SAMPLING	CDS	201881	201887	-4.85	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	201881	201988	-3.97	-	2	Name=rinternal0;postProb=0.01;avgBaseProb=0.02
chr20	SAMPLING	CDS	195918	196286	-3.33	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=0.539
chr20	SAMPLING	CDS	201331	201477	-3.48	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=0.843
chr20	SAMPLING	CDS	196203	196286	-3.58	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=1
chr20	SAMPLING	CDS	206250	206263	-4.63	-	1	Name=rinternal1;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	210749	210822	-4.09	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	211153	211218	-4.13	-	0	Name=rinitial;postProb=0.01;avgBaseProb=0.0147
chr20	SAMPLING	CDS	205254	205341	-4.04	-	0	Name=rinitial;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	203844	203998	-3.39	-	1	Name=rinternal1;postProb=0.01;avgBaseProb=1
chr20	SAMPLING	CDS	205666	205708	-4.24	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=0.08
chr20	SAMPLING	CDS	210419	210457	-4.3	-	0	Name=rinitial;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	195903	196328	-3.03	-	0	Name=rterminal2;postProb=0.06;avgBaseProb=0.549
chr20	SAMPLING	CDS	199037	199127	-3.81	-	2	Name=rinternal0;postProb=0.02;avgBaseProb=0.363
chr20	SAMPLING	CDS	216617	216788	-3.82	-	0	Name=rinitial;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	195903	196286	-3.32	-	0	Name=rterminal2;postProb=0.01;avgBaseProb=0.521
chr20	SAMPLING	CDS	195925	195952	-4.41	-	1	Name=rterminal1;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	196063	196328	-3.32	-	0	Name=rinternal2;postProb=0.01;avgBaseProb=0.778
chr20	SAMPLING	CDS	199312	199608	-3.22	-	0	Name=rterminal2;postProb=0.01;avgBaseProb=0.914
chr20	SAMPLING	CDS	205785	205953	-3.83	+	0	Name=initial1;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	206079	206184	-3.98	+	2	Name=internal2;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	208218	208473	-3.69	+	1	Name=terminal;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	208518	208540	-4.05	+	0	Name=initial2;postProb=0.09;avgBaseProb=0.0952
chr20	SAMPLING	CDS	208518	208529	-4.64	+	0	Name=initial0;postProb=0.01;avgBaseProb=0.1
