# This output was generated with AUGUSTUS (version 3.2.2).
# AUGUSTUS is a gene prediction tool written by M. Stanke (mario.stanke@uni-greifswald.de),
# O. Keller, S. König, L. Gerischer and L. Romoth.
# Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008),
# Using native and syntenically mapped cDNA alignments to improve de novo gene finding
# Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013
#
#----- prediction for species 'monDom5' -----
#
#----- prediction on sequence range chr6:1-59266 (59266bp) -----
#
# start gene g1
chr6	AUGUSTUS	gene	1951	45803	0	-	.	g1
chr6	AUGUSTUS	transcript	1951	45803	.	-	.	g1.t1
chr6	AUGUSTUS	CDS	1951	2115	.	-	1	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	CDS	3368	3397	0.52	-	1	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	CDS	4767	4855	0.54	-	0	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	CDS	6388	6564	1	-	0	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	CDS	8629	8772	0.99	-	0	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	CDS	13646	13756	0.9	-	0	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	CDS	28945	29043	0.78	-	0	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	CDS	43146	43240	0.26	-	2	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	CDS	45743	45803	0.75	-	0	transcript_id "g1.t1"; gene_id "g1";
chr6	AUGUSTUS	start_codon	45801	45803	.	-	0	transcript_id "g1.t1"; gene_id "g1";
# protein sequence = [MSAQAQMRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECTKIHDLALRADYEIASKDR
# DLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNS
# MPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREERMGRRSGSRTRDRRRSRSRD
# RRRRRSRSGSRERRKSRSRSRDRHRRHRSRSRSHSRGHRRGSRDRSSKH]
# Evidence for and against this transcript:
# % of transcript supported by hints (any source): 0
# CDS exons: 0/9
# CDS introns: 0/8
# 5'UTR exons and introns: 0/0
# 3'UTR exons and introns: 0/0
# hint groups fully obeyed: 74
#     RM:  74 
# incompatible hint groups: 0
# end gene g1
###
