# This output was generated with AUGUSTUS (version 3.2.2).
# AUGUSTUS is a gene prediction tool written by M. Stanke (mario.stanke@uni-greifswald.de),
# O. Keller, S. König, L. Gerischer and L. Romoth.
# Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008),
# Using native and syntenically mapped cDNA alignments to improve de novo gene finding
# Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013
#
#----- prediction for species 'rheMac3' -----
#
chr20	SAMPLING	intron	165999	175211	-2.76	-	.	Name=rintron;postProb=0.42;avgBaseProb=0.454
chr20	SAMPLING	intron	176171	180269	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	176099	180269	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	165999	174864	-5.13	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.45
chr20	SAMPLING	intron	174881	175211	-3.82	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.56
chr20	SAMPLING	intron	165999	168245	-4.82	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.44
chr20	SAMPLING	intron	168333	175211	-5.03	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.459
chr20	SAMPLING	intron	176171	180321	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	174121	175211	-3.67	-	.	Name=rintron;postProb=0.09;avgBaseProb=0.559
chr20	SAMPLING	intron	176171	180307	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	176171	180470	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	174356	174864	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	176128	180269	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	174092	174549	-3.92	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.554
chr20	SAMPLING	intron	174601	175211	-3.98	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.56
chr20	SAMPLING	intron	174092	175211	-4.09	-	.	Name=rintron;postProb=0.02;avgBaseProb=0.557
chr20	SAMPLING	intron	194862	195399	3.61	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	195487	195572	4.09	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	195708	196133	3.67	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	196287	196949	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	199609	199931	3.74	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	200049	201330	3.38	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	201478	201536	4.18	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	201716	202069	3.72	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	202207	202445	3.82	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	202570	202656	4.08	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	202748	203435	3.54	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	203756	203843	4.08	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	204113	204306	3.87	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	204435	204647	3.85	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	204856	204939	4.09	-	.	Name=rintron;postProb=1;avgBaseProb=1
chr20	SAMPLING	intron	205118	205665	-1.32	-	.	Name=rintron;postProb=0.46;avgBaseProb=0.567
chr20	SAMPLING	intron	206587	207547	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	205118	205225	1.31	-	.	Name=rintron;postProb=0.53;avgBaseProb=1
chr20	SAMPLING	intron	206752	207547	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	206805	207547	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	206712	207547	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	206883	207547	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	207080	207547	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	206941	207547	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	206984	207547	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	207111	207547	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	206696	207547	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	206738	207547	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	206909	207547	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	206712	207621	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	206752	207621	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	206623	207547	0	+	.	Name=intron;postProb=0;avgBaseProb=0
chr20	SAMPLING	intron	205118	205253	-2.2	-	.	Name=rintron;postProb=0.01;avgBaseProb=0.891
chr20	SAMPLING	intron	208530	214433	-6.11	+	.	Name=intron;postProb=0.04;avgBaseProb=0.15
chr20	SAMPLING	intron	208541	214433	-5.7	+	.	Name=intron;postProb=0.11;avgBaseProb=0.15
chr20	SAMPLING	CDS	175212	176089	-0.193	-	0	Name=rinitial;postProb=0.56;avgBaseProb=1
chr20	SAMPLING	5'UTR	176090	176170	0.99	-	.	Name=rutr5term;postProb=0.97;avgBaseProb=0.977
chr20	SAMPLING	5'UTR	180270	180493	-1.32	-	.	Name=rutr5init;postProb=0.42;avgBaseProb=0.965
chr20	SAMPLING	5'UTR	180270	180513	-2.47	-	.	Name=rutr5init;postProb=0.18;avgBaseProb=0.914
chr20	SAMPLING	5'UTR	180270	180503	-1.8	-	.	Name=rutr5init;postProb=0.32;avgBaseProb=0.946
chr20	SAMPLING	5'UTR	176090	176098	-4.26	-	.	Name=rutr5term;postProb=0.02;avgBaseProb=1
chr20	SAMPLING	CDS	174865	174880	-4.59	-	1	Name=rinternal1;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	CDS	168246	168332	-4.04	-	1	Name=rinternal1;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	5'UTR	180322	180503	-3.36	-	.	Name=rutr5init;postProb=0.01;avgBaseProb=0.948
chr20	SAMPLING	3'UTR	173873	175207	-2.23	-	.	Name=rutr3single;postProb=0.18;avgBaseProb=0.259
chr20	SAMPLING	CDS	175208	176089	-0.768	-	0	Name=rsingle;postProb=0.44;avgBaseProb=0.997
chr20	SAMPLING	3'UTR	173873	174020	-3.44	-	.	Name=rutr3single;postProb=0.07;avgBaseProb=0.306
chr20	SAMPLING	CDS	174021	174120	-3.58	-	1	Name=rterminal1;postProb=0.09;avgBaseProb=0.09
chr20	SAMPLING	5'UTR	180308	180493	-3.25	-	.	Name=rutr5init;postProb=0.03;avgBaseProb=0.972
chr20	SAMPLING	5'UTR	180471	180493	-3.91	-	.	Name=rutr5init;postProb=0.03;avgBaseProb=0.996
chr20	SAMPLING	3'UTR	173873	174355	-3.38	-	.	Name=rutr3term;postProb=0.01;avgBaseProb=0.242
chr20	SAMPLING	3'UTR	174865	175207	-3.43	-	.	Name=rutr3init;postProb=0.01;avgBaseProb=0.36
chr20	SAMPLING	5'UTR	176090	176127	-3.85	-	.	Name=rutr5term;postProb=0.01;avgBaseProb=0.985
chr20	SAMPLING	3'UTR	173873	174060	-3.61	-	.	Name=rutr3single;postProb=0.02;avgBaseProb=0.292
chr20	SAMPLING	CDS	174061	174091	-4.27	-	1	Name=rterminal1;postProb=0.03;avgBaseProb=0.03
chr20	SAMPLING	CDS	174550	174600	-4.21	-	1	Name=rinternal1;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	3'UTR	173943	174020	-3.88	-	.	Name=rutr3single;postProb=0.02;avgBaseProb=0.33
chr20	SAMPLING	3'UTR	173943	174060	-3.81	-	.	Name=rutr3single;postProb=0.01;avgBaseProb=0.299
chr20	SAMPLING	3'UTR	173943	175207	-3.01	-	.	Name=rutr3single;postProb=0.02;avgBaseProb=0.258
chr20	SAMPLING	3'UTR	174815	175207	-3.06	-	.	Name=rutr3single;postProb=0.08;avgBaseProb=0.35
chr20	SAMPLING	3'UTR	174977	175207	-3.54	-	.	Name=rutr3single;postProb=0.01;avgBaseProb=0.395
chr20	SAMPLING	3'UTR	175017	175207	-3.5	-	.	Name=rutr3single;postProb=0.03;avgBaseProb=0.414
chr20	SAMPLING	5'UTR	180270	180483	-3.3	-	.	Name=rutr5init;postProb=0.01;avgBaseProb=0.964
chr20	SAMPLING	3'UTR	175027	175207	-3.61	-	.	Name=rutr3single;postProb=0.01;avgBaseProb=0.419
chr20	SAMPLING	3'UTR	175037	175207	-3.53	-	.	Name=rutr3single;postProb=0.03;avgBaseProb=0.424
chr20	SAMPLING	3'UTR	175047	175207	-3.6	-	.	Name=rutr3single;postProb=0.02;avgBaseProb=0.427
chr20	SAMPLING	3'UTR	175067	175207	-3.54	-	.	Name=rutr3single;postProb=0.04;avgBaseProb=0.432
chr20	SAMPLING	3'UTR	175177	175207	-4.17	-	.	Name=rutr3single;postProb=0.01;avgBaseProb=0.44
chr20	SAMPLING	3'UTR	194307	194753	-2.96	-	.	Name=rutr3single;postProb=0.06;avgBaseProb=0.664
chr20	SAMPLING	CDS	194754	194861	1.24	-	0	Name=rterminal2;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	195400	195486	1.17	-	0	Name=rinternal2;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	195573	195707	1.31	-	0	Name=rinternal2;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	196134	196190	1.03	-	0	Name=rinitial;postProb=1;avgBaseProb=1
chr20	SAMPLING	5'UTR	196191	196286	1.2	-	.	Name=rutr5term;postProb=1;avgBaseProb=1
chr20	SAMPLING	5'UTR	196950	197193	-1.53	-	.	Name=rutr5init;postProb=0.37;avgBaseProb=0.982
chr20	SAMPLING	5'UTR	196950	197183	-1.43	-	.	Name=rutr5init;postProb=0.39;avgBaseProb=0.999
chr20	SAMPLING	3'UTR	194437	194753	-3.2	-	.	Name=rutr3single;postProb=0.01;avgBaseProb=0.911
chr20	SAMPLING	3'UTR	194447	194753	-3.2	-	.	Name=rutr3single;postProb=0.01;avgBaseProb=0.939
chr20	SAMPLING	5'UTR	196950	197343	-3.26	-	.	Name=rutr5init;postProb=0.01;avgBaseProb=0.633
chr20	SAMPLING	3'UTR	194467	194753	1.07	-	.	Name=rutr3single;postProb=0.9;avgBaseProb=0.999
chr20	SAMPLING	5'UTR	196950	197203	-2.96	-	.	Name=rutr5init;postProb=0.07;avgBaseProb=0.951
chr20	SAMPLING	5'UTR	196950	197243	-3.21	-	.	Name=rutr5init;postProb=0.02;avgBaseProb=0.836
chr20	SAMPLING	5'UTR	196950	197213	-3.16	-	.	Name=rutr5init;postProb=0.03;avgBaseProb=0.92
chr20	SAMPLING	5'UTR	196950	197273	-3.26	-	.	Name=rutr5init;postProb=0.01;avgBaseProb=0.765
chr20	SAMPLING	5'UTR	196950	197173	-3.17	-	.	Name=rutr5init;postProb=0.03;avgBaseProb=1
chr20	SAMPLING	5'UTR	196950	197323	-3.26	-	.	Name=rutr5init;postProb=0.01;avgBaseProb=0.666
chr20	SAMPLING	5'UTR	196950	197283	-3.16	-	.	Name=rutr5init;postProb=0.03;avgBaseProb=0.743
chr20	SAMPLING	5'UTR	196950	197253	-3.26	-	.	Name=rutr5init;postProb=0.01;avgBaseProb=0.811
chr20	SAMPLING	5'UTR	196950	197223	-3.21	-	.	Name=rutr5init;postProb=0.02;avgBaseProb=0.891
chr20	SAMPLING	3'UTR	194487	194753	-3.16	-	.	Name=rutr3single;postProb=0.02;avgBaseProb=1
chr20	SAMPLING	3'UTR	198116	199311	-1.21	-	.	Name=rutr3single;postProb=0.33;avgBaseProb=0.961
chr20	SAMPLING	CDS	199312	199608	1.56	-	0	Name=rterminal2;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	199932	200048	1.26	-	0	Name=rinternal2;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	201331	201477	1.34	-	0	Name=rinternal2;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	201537	201715	1.4	-	2	Name=rinternal0;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	202070	202206	1.31	-	1	Name=rinternal1;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	202446	202569	1.28	-	2	Name=rinternal0;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	202657	202747	1.18	-	0	Name=rinternal2;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	203436	203755	1.59	-	2	Name=rinternal0;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	203844	204112	1.53	-	1	Name=rinternal1;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	204307	204434	1.29	-	0	Name=rinternal2;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	204648	204855	1.45	-	1	Name=rinternal1;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	204940	205117	1.4	-	2	Name=rinternal0;postProb=1;avgBaseProb=1
chr20	SAMPLING	CDS	205666	205720	-1.82	-	0	Name=rinitial;postProb=0.46;avgBaseProb=0.46
chr20	SAMPLING	5'UTR	205721	206586	-2.83	-	.	Name=rutr5term;postProb=0.01;avgBaseProb=1
chr20	SAMPLING	5'UTR	207548	208433	-0.403	-	.	Name=rutr5init;postProb=0.52;avgBaseProb=0.955
chr20	SAMPLING	CDS	205226	205304	-1.34	-	0	Name=rinitial;postProb=0.53;avgBaseProb=0.53
chr20	SAMPLING	5'UTR	205305	206751	-1.11	-	.	Name=rutr5term;postProb=0.35;avgBaseProb=0.857
chr20	SAMPLING	5'UTR	207548	208443	-2.8	-	.	Name=rutr5init;postProb=0.02;avgBaseProb=0.945
chr20	SAMPLING	5'UTR	205305	206804	-2.73	-	.	Name=rutr5term;postProb=0.01;avgBaseProb=0.835
chr20	SAMPLING	5'UTR	207548	208303	-2.02	-	.	Name=rutr5init;postProb=0.19;avgBaseProb=0.996
chr20	SAMPLING	5'UTR	205305	206711	-2.36	-	.	Name=rutr5term;postProb=0.09;avgBaseProb=0.859
chr20	SAMPLING	5'UTR	205721	206882	-2.45	-	.	Name=rutr5term;postProb=0.08;avgBaseProb=0.9
chr20	SAMPLING	5'UTR	207548	208423	-2.37	-	.	Name=rutr5init;postProb=0.11;avgBaseProb=0.96
chr20	SAMPLING	5'UTR	205721	207079	-2.74	-	.	Name=rutr5term;postProb=0.02;avgBaseProb=0.78
chr20	SAMPLING	5'UTR	207548	208293	-2.69	-	.	Name=rutr5init;postProb=0.05;avgBaseProb=0.997
chr20	SAMPLING	5'UTR	205721	206940	-2.64	-	.	Name=rutr5term;postProb=0.04;avgBaseProb=0.863
chr20	SAMPLING	5'UTR	205305	206586	-2.68	-	.	Name=rutr5term;postProb=0.03;avgBaseProb=0.85
chr20	SAMPLING	5'UTR	205721	206751	-2.11	-	.	Name=rutr5term;postProb=0.15;avgBaseProb=0.986
chr20	SAMPLING	5'UTR	207548	208413	-2.66	-	.	Name=rutr5init;postProb=0.05;avgBaseProb=0.963
chr20	SAMPLING	5'UTR	205721	206983	-2.55	-	.	Name=rutr5term;postProb=0.06;avgBaseProb=0.837
chr20	SAMPLING	5'UTR	205721	206711	-2.6	-	.	Name=rutr5term;postProb=0.05;avgBaseProb=0.994
chr20	SAMPLING	3'UTR	198183	199311	0.174	-	.	Name=rutr3single;postProb=0.62;avgBaseProb=0.998
chr20	SAMPLING	5'UTR	205721	207110	-2.79	-	.	Name=rutr5term;postProb=0.01;avgBaseProb=0.763
chr20	SAMPLING	5'UTR	207548	208323	-2.82	-	.	Name=rutr5init;postProb=0.02;avgBaseProb=0.99
chr20	SAMPLING	5'UTR	205305	206695	-2.75	-	.	Name=rutr5term;postProb=0.01;avgBaseProb=0.859
chr20	SAMPLING	5'UTR	205305	206737	-2.64	-	.	Name=rutr5term;postProb=0.03;avgBaseProb=0.858
chr20	SAMPLING	5'UTR	205721	206908	-2.78	-	.	Name=rutr5term;postProb=0.01;avgBaseProb=0.883
chr20	SAMPLING	5'UTR	207622	208433	-2.78	-	.	Name=rutr5init;postProb=0.03;avgBaseProb=0.954
chr20	SAMPLING	5'UTR	205305	206622	-2.77	-	.	Name=rutr5term;postProb=0.01;avgBaseProb=0.853
chr20	SAMPLING	5'UTR	205721	206737	-2.69	-	.	Name=rutr5term;postProb=0.03;avgBaseProb=0.989
chr20	SAMPLING	5'UTR	207548	208283	-2.89	-	.	Name=rutr5init;postProb=0.01;avgBaseProb=0.997
chr20	SAMPLING	CDS	205254	205341	-4.04	-	0	Name=rinitial;postProb=0.01;avgBaseProb=0.01
chr20	SAMPLING	5'UTR	205342	206751	-2.74	-	.	Name=rutr5term;postProb=0.01;avgBaseProb=0.866
chr20	SAMPLING	3'UTR	198219	199311	-2.56	-	.	Name=rutr3single;postProb=0.05;avgBaseProb=1
chr20	SAMPLING	5'UTR	208454	208517	-3.85	+	.	Name=utr5single;postProb=0.06;avgBaseProb=0.114
chr20	SAMPLING	CDS	208518	208529	-4.47	+	0	Name=initial0;postProb=0.04;avgBaseProb=0.15
chr20	SAMPLING	CDS	208518	208540	-3.93	+	0	Name=initial2;postProb=0.11;avgBaseProb=0.131
chr20	SAMPLING	5'UTR	208474	208517	-4.01	+	.	Name=utr5single;postProb=0.05;avgBaseProb=0.139
chr20	SAMPLING	5'UTR	208484	208517	-4.18	+	.	Name=utr5single;postProb=0.03;avgBaseProb=0.147
chr20	SAMPLING	5'UTR	208494	208517	-4.39	+	.	Name=utr5single;postProb=0.01;avgBaseProb=0.15
