# This output was generated with AUGUSTUS (version 3.2.2).
# AUGUSTUS is a gene prediction tool written by M. Stanke (mario.stanke@uni-greifswald.de),
# O. Keller, S. König, L. Gerischer and L. Romoth.
# Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008),
# Using native and syntenically mapped cDNA alignments to improve de novo gene finding
# Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013
#
#----- prediction for species 'galGal4' -----
#
#----- prediction on sequence range chr14:142187-149999 (7813bp) -----
#
# start gene g1
chr14	AUGUSTUS	gene	142860	149000	.	-	.	g1
chr14	AUGUSTUS	transcript	142860	149000	.	-	.	g1.t1
chr14	AUGUSTUS	stop_codon	142860	142862	.	-	0	transcript_id "g1.t1"; gene_id "g1";
chr14	AUGUSTUS	CDS	142860	142943	0.66	-	0	transcript_id "g1.t1"; gene_id "g1";
chr14	AUGUSTUS	CDS	143184	143314	0.91	-	2	transcript_id "g1.t1"; gene_id "g1";
chr14	AUGUSTUS	CDS	147077	147259	0.97	-	2	transcript_id "g1.t1"; gene_id "g1";
chr14	AUGUSTUS	CDS	147561	147677	0.94	-	2	transcript_id "g1.t1"; gene_id "g1";
chr14	AUGUSTUS	CDS	148736	149000	1	-	0	transcript_id "g1.t1"; gene_id "g1";
chr14	AUGUSTUS	start_codon	148998	149000	.	-	0	transcript_id "g1.t1"; gene_id "g1";
# protein sequence = [MDNKDSEAEIHPLKTEDVKAQENHENSVERRIIIKQSSQLSRLSRWRTAAFFISLFLCLIIVFAFSFIIPCPERPVSE
# RTWLRNYDNAVAYRFLAIEDVNEDKVQDVIFAFKASNGSSSFNSSCLDEGLPSPCAFITAVSGTNGRVLWERPAAMEVGWMQCGIKQLGGAPGCLLVG
# QPVALTAVDQRTGEVQWRQSDDFGANYTVLTPLSVIPDVDGDGVQDLIIFIATGDKAVYGEQLGKMSLQFSRTVLREVEVNKP]
# Evidence for and against this transcript:
# % of transcript supported by hints (any source): 0
# CDS exons: 0/5
# CDS introns: 0/4
# 5'UTR exons and introns: 0/0
# 3'UTR exons and introns: 0/0
# hint groups fully obeyed: 20
#     RM:  20 
# incompatible hint groups: 1
#     RM:   1 
# end gene g1
###
