Home  · Classes  · Annotated Classes  · Modules  · Members  · Namespaces  · Related Pages
QCCalculator

Calculates basic quality parameters from MS experiments and subsequent analysis data as identification or feature detection.

pot. predecessor tools $ \longrightarrow $ QCCalculator $ \longrightarrow $ pot. successor tools
FeatureFinderCentroided QCMerger
XTandemAdapter QCExporter

The calculated quality parameters include file origin, spectra distribution, aquisition details, ion current stability ( & tic ), id accuracy statistics and feature statistics. The MS experiments base name is used as name to the qcml element that is comprising all quality parameter values for the given run (including the given downstream analysis data).

Output is in qcML format (see parameter out) which can be viewed directly in a modern browser (chromium, firefox).

The command line parameters of this tool are:

INI file documentation of this tool:


OpenMS / TOPP release 1.11.1 Documentation generated on Mon Dec 23 2013 22:47:51 using doxygen 1.8.5