Groups corresponding features from multiple maps using a QT clustering approach.
potential predecessor tools | ![]() ![]() | potential successor tools |
FeatureFinderCentroided (or another feature detection algorithm) | ProteinQuantifier | |
MapAlignerPoseClustering (or another map alignment algorithm) | TextExporter | |
SeedListGenerator |
Reference:
Weisser et al.: An automated pipeline for high-throughput label-free quantitative proteomics (J. Proteome Res., 2013, PMID: 23391308).
This tool provides an algorithm for grouping corresponding features in multiple runs of label-free experiments. For more details and algorithm-specific parameters (set in the ini file) see "Detailed Description" in the algorithm documentation.
FeatureLinkerUnlabeledQT takes several feature maps (featureXML files) and stores the corresponding features in a consensus map (consensusXML file). Feature maps can be created from MS experiments (peak data) using one of the FeatureFinder TOPP tools.
The command line parameters of this tool are:
INI file documentation of this tool:
OpenMS / TOPP release 1.11.1 | Documentation generated on Mon Dec 23 2013 22:47:51 using doxygen 1.8.5 |